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| PubMed | Entrez | BLAST | Genome | Taxonomy | Structure |
| or |
| root (100 nodes) |
 bacteria (100 nodes) |
  proteobacteria (41 nodes) |
 g-proteobacteria (24 nodes) |
| enterobacteria (8 nodes) |
| enterobacteria (5 nodes) |
| other enterobacteria (3 nodes) |
| other g-proteobacteria (16 nodes) |
| a-proteobacteria (11 nodes) |
| b-proteobacteria (5 nodes) |
| firmicutes (26 nodes) |
| high G+C Gram-positive bacteria (9 nodes) |
| spirochetes (4 nodes) |
| e-proteobacteria (4 nodes) |
| cyanobacteria (3 nodes) |
| green sulfur bacteria (3 nodes) |
| chlamydias (2 nodes) |
| fusobacteria (2 nodes) |
| CFB group bacteria (2 nodes) |
| other bacteria (4 nodes) |
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