U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from PMC

    • Showing Current items.

    rpoE RNA polymerase sigma factor RpoE [ Pseudomonas fluorescens ]

    Gene ID: 61637611, updated on 3-Apr-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    rpoE
    Gene description
    RNA polymerase sigma factor RpoE
    Locus tag
    CPH89_RS18280
    Gene type
    protein coding
    Organism
    Pseudomonas fluorescens (strain: ATCC 13525, type-material: type strain of Pseudomonas fluorescens)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
    Old locus tag
    SAMN04488487_3751
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: I

    I - NZ_LT907842.1Genomic Context describing neighboring genes Neighboring gene succinate dehydrogenase assembly factor 2 Neighboring gene protein YgfX Neighboring gene L-aspartate oxidase Neighboring gene RseA family anti-sigma factor Neighboring gene MucB/RseB C-terminal domain-containing protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NZ_LT907842.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Mutant phenotypes for thousands of bacterial genes of unknown function. Price MN, et al. Nature, 2018 May. PMID 29769716

    GeneRIFs: Gene References Into Functions

    General protein information

    Go to the top of the page Help
    Preferred Names
    RNA polymerase sigma factor RpoE

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_LT907842.1 Reference assembly

      Range
      3938698..3939279
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_003172477.1 MULTISPECIES: RNA polymerase sigma factor RpoE [Gammaproteobacteria]

      See identical proteins and their annotated locations for WP_003172477.1

      UniProtKB/TrEMBL
      A0A031G6X8, A0A031IUR2, A0A083UHU1, A0A0A1HSG8, A0A0A1YZ80, A0A0A6DL10, A0A0B1Z081, A0A0E3GZY8, A0A0F4XIV9, A0A0H5A4K1, A0A0J6KDA6, A0A0J8G902, A0A0K1QNK4, A0A0L1MGY8, A0A0M4QHH5, A0A0Q4EZM6, A0A0Q6ZYK7, A0A0Q8A348, A0A0Q8CGS2, A0A0Q8J239, A0A0Q8YTQ1, A0A0R2YI42, A0A0R3A700, A0A0R3AST3, A0A0R3ATK4, A0A0R3CCX3, A0A0S8ZB95, A0A0W0I384, A0A0W0N4F5, A0A127HYA2, A0A142N7T7, A0A172YXQ6, A0A176NGZ1, A0A176V3P0, A0A1B5DM73, A0A1C1WCQ1, A0A1D3JTK4, A0A1E4XA79, A0A1G4TQA0, A0A1H0F1A4, A0A1H0KCW8, A0A1H0VT43, A0A1H0YQ57, A0A1H1IMP5, A0A1H1RT47, A0A1H2AA91, A0A1H2FFP2, A0A1H2JE67, A0A1H2N9F2, A0A1H2P676, A0A1H3J557, A0A1H4PG75, A0A1H4Z8X3, A0A1H5H3C8, A0A1H8MTM7, A0A1I5INB7, A0A1K1SNQ9, A0A1K2CF31, A0A1N7GKN0, A0A1N7TVN4, A0A1Q4KFC0, A0A1R0GAV1, A0A1S1UT34, A0A1S2V4S3, A0A1T1HTC0, A0A1V2KFL9, A0A1V3SF91, A0A1X7DGG3, A0A218ZY68, A0A223VPV7, A0A231GK29, A0A246G3T9, A0A257E177, A0A263NPV6, A0A270P9I3, A0A2A2E3Y8, A0A2G0VEK0, A0A2G0WUS0, A0A2G0Z9F8, A0A2G5LX54, A0A2G5M881, A0A2H2YJA2, A0A2K4FN81, A0A2K4GBL1, A0A2K4IDU1, A0A2K4KVH7, A0A2K9CHG0, A0A2M8SGH5, A0A2M9G9G6, A0A2N0DV77, A0A2N1H476, A0A2N5EYX6, A0A2N7RJ05, A0A2N7YBG4, A0A2N7YNS3, A0A2N7Z0B4, A0A2N8CUK7, A0A2N8DR42, A0A2N8EQZ4, A0A2P8LH89, A0A2R7NE24, A0A2S3VT58, A0A2S6FFW4, A0A2S9AZ86, A0A2S9BAZ4, A0A2S9D9P4, A0A2T4FR70, A0A2T5KV09, A0A2U1IPX6, A0A2U1RCM3, A0A2W7KZR4, A0A345RM10, A0A399PRB0, A0A3E1HQK1, A0A3G7Y9X7, A0A3G8C6W7, A0A3N7EH58, A0A3S0KWJ8, A0A3S1BEM6, A0A423F698, A0A481QSD6, A0A4P7PD75, A0A4R7UUM7, A0A4S3YVU5, A0A4V5UJY2, A0A4Z0AZB6, A0A4Z0BC11, A0A554A9W4, A0A560PFQ2, A0A560RMH2, A0A560T2R2, A0A5C4P6J2, A0A5C5NYV6, A0A5C5Q2F9, A0A5C5QM16, A0A5N7JT50, A0A5P1D700, A0A5R8QZ19, A0A6A7YTH8, A0A6I3WKA7, A0A6I6Q454, A0A6I6T312, A0A6I6VGV2, A0A6I6VPG0, A0A6N1CLP4, A0A7H8GQ81, A0A7S7MX81, A0A7U9GSR8, A0A7V8RJ05, A0A7X1DYR5, A0A7X1GGU1, A0A7X2RWP6, A0A7X9TSJ4, A0A7Y0VVM9, A0A7Y0W8Z9, A0A7Y0Z9I3, A0A7Y1BDF8, A0A7Y1DE20, A0A7Y1F0D9, A0A7Y1MS08, A0A7Y2KVW5, A0A7Y5ZDX6, A0A7Y6EDH6, A0A7Y7SYK5, A0A7Y7ZQY9, A0A7Y7ZTL9, A0A7Y8AQQ3, A0A7Y8D0J4, A0A7Y8DJ58, A0A7Y8JVY4, A0A7Y8UVW4, A0A7Z0T3E7, A0A7Z2KRC4, A0A7Z2M5R5, A0A7Z3AGP3, A0A855K035, A0A855LMA5, A0A855QGZ4, A0A8H9YZA1, A0A923FB16, A0A923JFZ4, A0A9D5F6Q3, A0A9E6NT49, A0A9E6P4R1, A0A9X0YB15, A0A9X1BE30, A0A9X1BJ10, A0A9X4C7C4, A0AA34VH82, A0AA45HFL4, A0AA49KMU1, A0AA49LJA9, A0AA49LV01, A0AA49M6P6, A0AA49MF19, A0AA49MKC0, A0AA49N198, A0AA49NGK5, A0AA49NZ86, A0AA49PKH0, A0AA49PUK0, A0AA49QNS2, A0AA49QWB7, A0AA49SER5, A0AA49T6H1, A0AA49TGG3, A0AA49U1C4, A0AA49U8C4, A0AA49UST4, A0AA49V5Z2, A0AA49VLK0, A0AA49W682, A0AA49Y8H5, A0AA49YNF7, A0AA49Z4U2, A0AA49ZP36, A0AA50A4B3, A0AA92RQ84, A0AA96YD50, C3KE31, F2KE50, G9HQL5, I4KCC9, J2MWP0, J2N0Q5, J2QFG7, J2SCG7, J2SD18, J2SZ45, J2U962, J2XKJ6, J2YW67, J3E0R0, J3F4B7, J3GME4, J3I9S2, J3IT64, K9NF96, Q3KGK1, S2FPA5, U1UXQ7, V8R9Q3, W2D699, W8PSW2
      Conserved Domains (1) summary
      PRK11923
      Location:1 → 192
      algU; RNA polymerase sigma factor AlgU; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.