| ID: 29499 | sonic hedgehog signaling molecule [Rattus norvegicus (Norway rat)] | Chromosome 4, NC_086022.1 (7687872..7697025) | ShhNC |
| ID: 29373 | bone morphogenetic protein 2 [Rattus norvegicus (Norway rat)] | Chromosome 3, NC_086021.1 (141264648..141275416) | |
| ID: 25495 | noggin [Rattus norvegicus (Norway rat)] | Chromosome 10, NC_086028.1 (74625874..74627501, complement) | |
| ID: 25296 | bone morphogenetic protein 4 [Rattus norvegicus (Norway rat)] | Chromosome 15, NC_086033.1 (22098191..22113145, complement) | BOMPR4A |
| ID: 22408 | wingless-type MMTV integration site family, member 1 [Mus musculus (house mouse)] | Chromosome 15, NC_000081.7 (98687738..98691711) | Int-1, Wnt-1, sw, swaying |
| ID: 20997 | brachyury, T-box transcription factor T [Mus musculus (house mouse)] | Chromosome 17, NC_000083.7 (8653255..8661328) | Bra, D17Mit170, Low, Lr1, Tbxt, Tl2, Tl3, cou, me75, T |
| ID: 20464 | single-minded family bHLH transcription factor 1 [Mus musculus (house mouse)] | Chromosome 10, NC_000076.7 (50770794..50865252) | bHLHe14, mSIM1 |
| ID: 20423 | sonic hedgehog [Mus musculus (house mouse)] | Chromosome 5, NC_000071.7 (28661838..28672099, complement) | 9530036O11Rik, Dsh, HHG-1, Hhg1, Hx, Hxl3, M100081NC, Shh |
| ID: 19713 | ret proto-oncogene [Mus musculus (house mouse)] | Chromosome 6, NC_000072.7 (118128709..118174705, complement) | PTC, RET51, RET9, c-Ret |
| ID: 18508 | paired box 6 [Mus musculus (house mouse)] | Chromosome 2, NC_000068.8 (105499241..105528755) | 1500038E17Rik, AEY11, Dey, Gsfaey11, Pax-6, Sey |
| ID: 18505 | paired box 3 [Mus musculus (house mouse)] | Chromosome 1, NC_000067.7 (78077904..78173773, complement) | Pax-3, Sp, Splchl2, splotch |
| ID: 18503 | paired box 1 [Mus musculus (house mouse)] | Chromosome 2, NC_000068.8 (147203850..147216972) | Pax-1, hbs, hunchback, un, undulated, wt |
| ID: 18121 | noggin [Mus musculus (house mouse)] | Chromosome 11, NC_000077.7 (89191464..89193385, complement) | |
| ID: 18088 | NK2 homeobox 2 [Mus musculus (house mouse)] | Chromosome 2, NC_000068.8 (146967909..147037270, complement) | Nkx-2.2, Nkx2.2, tinman |
| ID: 17927 | myogenic differentiation 1 [Mus musculus (house mouse)] | Chromosome 7, NC_000073.7 (46025898..46028516) | MYF3, MyoD, Myod-1, bHLHc1 |
| ID: 17701 | msh homeobox 1 [Mus musculus (house mouse)] | Chromosome 5, NC_000071.7 (37977835..37981929, complement) | Hox-7, Hox7, Hox7.1, msh |
| ID: 16392 | ISL1 transcription factor, LIM/homeodomain [Mus musculus (house mouse)] | Chromosome 13, NC_000079.7 (116434806..116446224, complement) | |
| ID: 15376 | forkhead box A2 [Mus musculus (house mouse)] | Chromosome 2, NC_000068.8 (147884797..147888889, complement) | HNF3-beta, HNF3beta, Hnf-3b, Hnf3b, Tcf-3b, Tcf3b |
| ID: 14313 | follistatin [Mus musculus (house mouse)] | Chromosome 13, NC_000079.7 (114588798..114595522, complement) | FS |
| ID: 13867 | erb-b2 receptor tyrosine kinase 3 [Mus musculus (house mouse)] | Chromosome 10, NC_000076.7 (128403392..128425504, complement) | Erbb-3r, Her3, Erbb3 |