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Accession: PRJNA131793 ID: 131793

Small RNA profiling Tomato, wild tomato relative and series of introgression lines

High throughput sequencing was used to investigate the production of small RNAs from cultivated tomato cultivar M82 and its wild relative Solanum pennellii. More...
AccessionPRJNA131793; GEO: GSE23562
Data TypeTranscriptome or Gene expression
ScopeMultispecies
Publications
  • Shivaprasad PV et al., "A microRNA superfamily regulates nucleotide binding site-leucine-rich repeats and other mRNAs.", Plant Cell, 2012 Mar;24(3):859-74
  • Shivaprasad PV et al., "Extraordinary transgressive phenotypes of hybrid tomato are influenced by epigenetics and small silencing RNAs.", EMBO J, 2012 Jan 18;31(2):257-66
SubmissionRegistration date: 29-May-2012
Baulcombe Group, Plant Sciences, University of Cambridge
RelevanceUnknown
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments18
Publications
PubMed2
PMC2
Other datasets
BioSample18
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes67
SRA Data Details
ParameterValue
Data volume, Gbases7
Data volume, Mbytes4850

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