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Accession: PRJNA80011 ID: 80011

Cicer arietinum (chickpea)

Chickpea transcriptome pyrosequencing

See Genome Information for Cicer arietinum
The study is aimed at deep pyrosequencing of complete transcriptome of chickpea (Cicer arietinum) using Roche 454 GS FLX Titanium platform. The study involves sequencing of RNA samples from six different tissue samples of chickpea.
AccessionPRJNA80011
Data TypeTranscriptome or Gene expression
ScopeMonoisolate
OrganismCicer arietinum[Taxonomy ID: 3827]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Cicereae; Cicer; Cicer arietinum
PublicationsGarg R et al., "Gene discovery and tissue-specific transcriptome analysis in chickpea with massively parallel pyrosequencing and web resource development.", Plant Physiol, 2011 Aug;156(4):1661-78
SubmissionRegistration date: 20-Dec-2011
NIPGR
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Publications
PubMed1
PMC1
Other datasets
BioSample6
SRA Data Details
ParameterValue
Data volume, Gbases1
Data volume, Mbytes2746

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