16S-Seq of Corn beer: Ecuadorian indigenous beer - SRA

SRX1600292: 16S-Seq of Corn beer: Ecuadorian indigenous beer
2 ILLUMINA (Illumina MiSeq) runs: 45,874 spots, 21M bases, 5.3Mb downloads

Design: DNA extraction from corn beer sample, 16S rDNA amplification and Illumina Sequencing

Submitted by: Universidad San Francisco de Quito

Study: Bacteria associated to human saliva are major microbial components of Ecuadorian indigenous beers (chicha)

PRJNA311720 • SRP070493 • All experiments • All runs

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Artisanal beers (chichas) are part of the indigenous culture in Ecuador. The fermentation process of these beers relay probably on microorganisms from fermenting substrates, environment and human microbiota. Therefore, the microbiota of chichas (including a type of beer produced after chewing boiled cassava) was analyzed using bTEFAP. Surprisingly, we found that Streptococcus salivarius and Streptococcus mutans (part of the human oral microbiota) were among the most abundant bacteria in chewed cassava and in non-chewed cassava beers.

Sample: Ecuadorian indigenous corn beer. Bacterial sequences

SAMN04505003 • SRS1310208 • All experiments • All runs

Organism: food fermentation metagenome

Library:

Name: >EE131201-002-939F

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Runs: 2 runs, 45,874 spots, 21M bases, 5.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR3187398	31,247	14.3M	3.6Mb	2016-03-01
SRR3202832	14,627	6.7M	1.7Mb	2016-03-04

ID:: 2260848

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