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    Homo sapiens collagen, type I, alpha 1 (COL1A1), RefSeqGene (LRG_1) on chromosome 17

    NCBI Reference Sequence: NG_007400.1

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      Analyze this sequence

      • Run BLAST
        Find regions of similarity between this sequence and other sequences using BLAST.
      • Pick Primers
        Design and test primers for this sequence using Primer-BLAST.
      • Highlight Sequence Features
        Opens the Highlight Feature Bar and highlights feature annotations from the FEATURES table of the record. The Highlight Feature Bar can be used to navigate to and highlight other features and provides links to display the highlighted region separately. Links in the FEATURES table will also highlight the corresponding region of the sequence. More...
      • Find in this Sequence
        Finds sub-sequences or patterns in the sequence and highlights the matching regions. The tool works with standard single letter nucleotide or protein codes including ambiguities and can match Prosite patterns in protein sequences. More...

      Articles about the COL1A1 gene

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      Variation viewer

      Reference sequence information

      • RefSeq mRNA
        See reference mRNA sequence for the COL1A1 gene (NM_000088.3).

      More about the COL1A1 gene

      Homologs of the COL1A1 gene

      Related information

      • Related Sequences
        Nucleotide sequences related by sequence similarity (BLAST) score to the current records.
      • Components (Core)
        Nucleotide records that are the components of the assembled sequence records in the current set.
      • Full text in PMC
        Free full-text articles in PubMed central that cite nucleotide records in the current set.
      • Gene
        Gene records referencing the current sequence records. Sequences included in Gene are added manually by NCBI.
      • GeneView in dbSNP
        Geneview in dbSNP showing nucleotide polymorphisms (SNPs) mapped to the genes associated with the current records.
      • HomoloGene
        Homologene clusters that contain the current RefSeq transcript sequences.
      • Map Viewer
        Graphical Map Viewer display of the current nucleotide records in assembled genomes. Records may be part of the assembly or mapped as alignment-based annotation.
      • mRNA
        mRNA sequence records that are annotated on the current genomic nucleotide sequences. The mRNA records represent aligned or predicted transcripts of the current records.
      • OMIM
        Online Mendelian Inheritance in Man articles that refer to nucleotide records in the current set.
      • Protein
        Protein translations of coding regions from sequence records in the current set.
      • PubMed (Weighted)
        PubMed articles associated with the current nucleotide records through the Gene database. These articles include Reference into Function, citations in related OMIM, and those associated with sequences in the Gene record.
      • SNP
        Single nucleotide polymorphisms (SNPs) mapped to the current records. Links may be provided through SNP data submission or through annotations on the nucleotide record.
      • Taxonomy
        NCBI Taxonomy entries and classification information for the source organisms of the current set of records.
      • UniSTS
        Genetic, physical, and sequence mapping reagents in the UniSTS database mapped on the current nucleotide records.

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