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Mus musculus (laboratory mouse) Build 37.1 (Current)

BLAST The Mouse Genome

Chromosome: [ 1 ] 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 X Y MT

Master Map: Genes On Sequence

Summary of Maps

Region Displayed: 0-197M bp

Download/View Sequence/Evidence

Symbol

Description

minus

best RefSeq

nuclear receptor coactivator 2

plus

protein

similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI)

plus

best RefSeq

aldehyde oxidase 3-like 1

minus

best RefSeq

islet cell autoantigen 1-like

plus

best RefSeq

5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase

plus

best RefSeq

myogenin

minus

best RefSeq

transmembrane protein 183A

minus

mRNA

regulator of G-protein signaling like 1

minus

mRNA

predicted gene, EG240853

plus

mRNA

ankyrin repeat domain 45

minus

mRNA

RIKEN cDNA 4921528O07 gene

minus

mRNA

similar to ubiquinol-cytochrome c reductase binding protein

plus

best RefSeq

coatomer protein complex subunit alpha

plus

best RefSeq

C-reactive protein, pentraxin-related

minus

best RefSeq

olfactory receptor 1408

minus

best RefSeq

cDNA sequence BC094916

minus

best RefSeq

interferon activated gene 205

minus

best RefSeq

gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)

minus

best RefSeq

H2.0-like homeo box 1 (Drosophila)

minus

best RefSeq

synaptotagmin XIV

Sequence

Sequence

Sequence

Sequence

Sequence

Sequence

Sequence

Copa Gene

Aliases: xenin

Crp Gene

Hlx1 Gene

Aliases: Hlx

Myog Gene

Aliases: myo, MYF4

Ncoa2 Gene

Aliases: TIF2, SRC-2, TIF-2, GRIP-1, 9530095N19

Grem2 Gene

Aliases: Gremlin2

Tmem183a Gene

Ica1l Gene

Ankrd45 Gene

4921528O07Rik Gene

Atic Gene

Aox3l1 Gene

Aliases: Aoh3

Ifi205 Gene

Aliases: D3, D3cDNA

Rgsl1 Gene

Olfr1408 Gene

Aliases: MOR267-4

Syt14 Gene

Aliases: sytXIV

BC094916 Gene

EG240853 Gene

LOC666814 Gene

LOC100040778 Gene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

UniGene

Chromosome: 1
Position: 3,000,001 - 22,423,349 (19.4M)plus

Chromosome: 1
Position: 22,473,350 - 75,102,130 (52.6M)plus

Chromosome: 1
Position: 75,118,131 - 85,343,678 (10.2M)plus

Chromosome: 1
Position: 87,343,679 - 157,965,873 (70.6M)plus

Chromosome: 1
Position: 158,098,874 - 184,921,810 (26.8M)plus

Chromosome: 1
Position: 185,327,811 - 193,825,657 (8.5M)plus

Chromosome: 1
Position: 193,875,658 - 197,195,432 (3.3M)plus

Chromosome: 1
Position: 78,405,337 - 196,918,083 (118.5M)

Chromosome: 1
Position: 72,620,473 - 88,923,065 (16.3M)

Chromosome: 1
Position: 60,568,934 - 63,635,253 (3.1M)

Chromosome: 1
Position: 95,200,981 - 95,231,517 (30,537bp)

Chromosome: 1
Position: 3,000,001 - 202,526,509 (199.5M)

Chromosome: 1
Position: 95,236,555 - 152,271,386 (57M)

Chromosome: 1
Position: 3,000,001 - 197,195,432 (194.2M)

Chromosome: 1
Position: 174,012,934 - 174,052,455 (39,522bp)plus

Chromosome: 1
Position: 174,628,197 - 174,630,091 (1,895bp)plus

Chromosome: 1
Position: 186,551,022 - 186,556,487 (5,466bp)minus

Chromosome: 1
Position: 136,186,590 - 136,189,127 (2,538bp)plus

Chromosome: 1
Position: 13,129,240 - 13,364,164 (234.9K)minus

Chromosome: 1
Position: 176,763,916 - 176,851,950 (88,035bp)minus

Chromosome: 1
Position: 136,242,674 - 136,258,576 (15,903bp)minus

Chromosome: 1
Position: 60,045,912 - 60,099,931 (54,020bp)minus

Chromosome: 1
Position: 163,072,817 - 163,097,874 (25,058bp)plus

Chromosome: 1
Position: 164,954,437 - 165,015,796 (61,360bp)minus

Chromosome: 1
Position: 71,603,748 - 71,625,978 (22,231bp)plus

Chromosome: 1
Position: 58,335,170 - 58,436,108 (100.9K)plus

Chromosome: 1
Position: 175,942,129 - 175,961,886 (19,758bp)minus

Chromosome: 1
Position: 155,632,253 - 155,691,271 (59,019bp)minus

Chromosome: 1
Position: 175,060,414 - 175,061,346 (933bp)minus

Chromosome: 1
Position: 194,723,501 - 194,861,892 (138.4K)minus

Chromosome: 1
Position: 175,451,442 - 175,465,982 (14,541bp)minus

Chromosome: 1
Position: 161,098,219 - 161,098,826 (608bp)minus

Chromosome: 1
Position: 45,658,898 - 45,659,601 (704bp)plus

Chromosome: 1
Position: 172,855,282 - 172,855,791 (510bp)minus

Chromosome: 1
Position: 174,106,807 - 174,145,030 (38,224bp)

Chromosome: 1
Position: 63,210,971 - 63,242,683 (31,713bp)

Chromosome: 1
Position: 121,989,540 - 122,029,275 (39,736bp)

Chromosome: 1
Position: 20,781,894 - 20,810,978 (29,085bp)

Chromosome: 1
Position: 130,215,941 - 130,256,282 (40,342bp)

Chromosome: 1
Position: 45,419,295 - 45,566,285 (147K)

Chromosome: 1
Position: 88,405,180 - 88,447,847 (42,668bp)

Chromosome: 1
Position: 72,741,920 - 72,771,517 (29,598bp)

Chromosome: 1
Position: 58,443,598 - 58,479,722 (36,125bp)

Chromosome: 1
Position: 13,539,101 - 13,586,412 (47,312bp)

Chromosome: 1
Position: 87,781,308 - 87,814,770 (33,463bp)

Chromosome: 1
Position: 95,296,085 - 95,375,494 (79,410bp)

Chromosome: 1
Position: 174,012,660 - 174,069,311 (56,652bp)

Chromosome: 1
Position: 153,187,415 - 153,219,335 (31,921bp)

Chromosome: 1
Position: 182,722,066 - 182,757,108 (35,043bp)

Chromosome: 1
Position: 88,226,444 - 88,271,780 (45,337bp)

Chromosome: 1
Position: 187,182,005 - 187,252,239 (70,235bp)

Chromosome: 1
Position: 152,239,968 - 152,310,515 (70,548bp)

Chromosome: 1
Position: 127,270,568 - 127,341,019 (70,452bp)

Chromosome: 1
Position: 163,162,627 - 163,188,744 (26,118bp)

Chromosome: 1
Position: 71,617,877 - 71,699,808 (81,932bp)

Chromosome: 1
Position: 84,703,986 - 84,843,095 (139.1K)

Chromosome: 1
Position: 45,358,674 - 45,426,528 (67,855bp)

Chromosome: 1
Position: 134,252,285 - 134,289,344 (37,060bp)

Chromosome: 1
Position: 182,499,013 - 182,550,909 (51,897bp)

Chromosome: 1
Position: 55,025,658 - 55,100,576 (74,919bp)

Chromosome: 1
Position: 87,952,127 - 88,045,334 (93,208bp)

Chromosome: 1
Position: 154,601,362 - 154,629,505 (28,144bp)

Chromosome: 1
Position: 89,951,968 - 90,125,936 (174K)

Chromosome: 1
Position: 55,120,156 - 55,152,298 (32,143bp)

Chromosome: 1
Position: 16,078,380 - 16,110,279 (31,900bp)

Chromosome: 1
Position: 72,891,691 - 72,933,409 (41,719bp)

Chromosome: 1
Position: 180,241,036 - 180,286,547 (45,512bp)

Chromosome: 1
Position: 95,375,541 - 95,431,572 (56,032bp)

Summary of Maps:

Map 1: Assembly

Region Displayed: 0-197M bp

Download/View Sequence/Evidence

Total Assembly On Chromosome: 7 [5 not localized]

Assembly Labeled: 7 Total Assembly in Region: 7

Map 2: Contig

Region Displayed: 0-197M bp

Download/View Sequence/Evidence

Total Contigs On Chromosome: 7 [5 not localized]

Contigs Labeled: 7 Total Contigs in Region: 7

Map 3: Mus musculus UniGene Clusters

Region Displayed: 0-197M bp

Download/View Sequence/Evidence

Total Transcript alignments On Chromosome: 5098 [121 not localized]

UniGene Clusters Labeled: 34 Total Transcript alignments in Region: 5098

Histogram Data: Tick Width=397,571bp/pixel, Max Height=4742 transcripts (logarithmic scale)

Map 4: Genes On Sequence

Region Displayed: 0-197M bp

Download/View Sequence/Evidence

Total Genes On Chromosome: 1819 [28 not localized]

Genes Labeled: 20 Total Genes in Region: 1819

Mouse genome overview page (Build 37.1)
Mouse genome overview page (Build 36.1)

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