LOVD FAS homepage

General information
Gene name TNF receptor superfamily, member 6
Gene symbol FAS
Chromosome Location 10q24.1
Database location ncbivariation
Curator Julie Niemela
PubMed references View all (unique) PubMed references in the FAS database
Date of creation August 14, 2009
Last update July 08, 2013
Version FAS130708
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Reference sequence file Genomic reference sequence for describing sequence variants
Genomic refseq ID NG_009089.1
Transcript refseq ID NM_000043.4
Total number of unique DNA variants reported 97
Total number of individuals with variant(s) 122
Total number of variants reported 122
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Graphical displays and utilities
Summary tables Summary of all sequence variants in the FAS database, sorted by type of variant (with graphical displays and statistics)
UCSC Genome Browser Show variants in the UCSC Genome Browser (compact view)
Ensembl Genome Browser Show variants in the Ensembl Genome Browser (compact view)
NCBI Sequence Viewer Show distribution histogram of variants in the NCBI Sequence Viewer

Sequence variant tables
Unique sequence variants Listing of all unique sequence variants in the FAS database, without patient data
Complete sequence variant listing Listing of all sequence variants in the FAS database
Variants with no known pathogenicity Listing of all FAS variants reported to have no noticeable phenotypic effect (note: excluding variants of unknown effect)
Download table Download the full sequence variant table of the FAS database in tab-delimited text format.

Search the database
By type of variant View all sequence variants of a certain type
Simple search Query the database by selecting the most important variables (exon number, type of variant, disease phenotype)
Advanced search Query the database by selecting a combination of variables
Based on patient origin View all variants based on your patient origin search terms

Links to other resources
Homepage http://www3.niaid.nih.gov/topics/ALPS/
HGNC 11920
Entrez Gene 355
OMIM - Gene 134637
OMIM - Disease Autoimmune lymphoproliferative syndrome (ALPS)

Copyright & disclaimer
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We have used all reasonable efforts to ensure that the information displayed on these pages and contained in the databases is of high quality. We make no warranty, express or implied, as to its accuracy or that the information is fit for a particular purpose, and will not be held responsible for any consequences arising out of any inaccuracies or omissions. Individuals, organisations and companies which use this database do so on the understanding that no liability whatsoever either direct or indirect shall rest upon the curator(s) or any of their employees or agents for the effects of any product, process or method that may be produced or adopted by any part, notwithstanding that the formulation of such product, process or method may be based upon information here provided.