Here is a list of all class members with links to the classes they belong to:
- x
: Vector, CFeatureTypesDlg, SeqItem
- X
: CVect4< T >, CVect3< T >, CVect2< T >, CQuat< T >, CGlPoint< T >, CBBox< N >
- x1
: GlZoomSpec::GlDim
- x2
: GlZoomSpec::GlDim
- x_Abort()
: CBDB_Transaction
- x_AbortConnection()
: CReader
- x_Absorb()
: CSubjectRanges
- x_AcceptRequest()
: CPoolOfThreads< TRequest >
- x_AccessState()
: CFeatureCheckPanel
- x_AccessViolationMessage()
: CNetScheduleHandler
- x_AcknowledgeBlastSequence()
: CAlignFormatUtil
- x_ActOnDescriptors()
: CCleanup_imp
- x_ActOnDescriptorsForMerge()
: CCleanup_imp
- x_ActOnSeqAnnots()
: CCleanup_imp
- x_ActualizeDeps()
: CNcbiTestApplication
- x_AdaptiveDepth()
: CSGSegmentMapJob
- x_Add()
: CDeleteSeqFeatCommand, CChangeSeqFeatCommand, CFlatSeqLoc, CSeqMap, CSeq_loc_Conversion_Set, CObjectIndex, CCompoundRWRegistry, CNetScheduleKeys
- x_AddAlign()
: CAlnTableDS
- x_AddAlignmentLayout()
: CAlignmentTrack
- x_AddAlignRanges()
: CPhrap_Contig
- x_AddAllFeaturesById()
: CTSE_Info
- x_AddAmbig()
: CAmbigDataBuilder
- x_AddAndClear()
: SCigarAlignment
- x_AddAnnotChunkId()
: CBioseq_Base_Info
- x_AddAnnotDescr()
: CAnalysisFileLoader
- x_AddAnnotPlace()
: CTSE_Split_Info, CTSE_Chunk_Info
- x_AddAnnotType()
: CTSE_Chunk_Info
- x_AddAssemblyChunkId()
: CBioseq_Info
- x_AddAssemblyInfo()
: CTSE_Split_Info, CTSE_Chunk_Info
- x_AddAttribute()
: CGFFReader
- x_AddAuthors()
: CReferenceItem
- x_AddBaseSegFeats()
: CPhrap_Contig
- x_AddBioseqChunkId()
: CBioseq_set_Info
- x_AddBioseqId()
: CTSE_Chunk_Info
- x_AddBioseqPlace()
: CTSE_Split_Info, CTSE_Chunk_Info
- x_AddBlock()
: CWriteDB_PackedBuffer< ALLOCSIZE >, CMemStore
- x_AddBlocksSet()
: CNCMMSizePool
- x_AddCategorizedDBs()
: CNetBLASTUIDataSource
- x_AddCDSmRNA_SNPLayout()
: CGeneModelTrack
- x_AddCDSProduct_FeatsLayout()
: CGeneModelTrack
- x_AddChildFolder()
: CProjectFolderPrx
- x_AddChildItem()
: CProjectFolderPrx
- x_AddChildItems()
: CProjectTreePanel
- x_AddChoice()
: CSeqdesc_CI
- x_AddClient()
: CWindowManager, CDockContainer, CFrameworkDemoGUI
- x_AddClientInfo_NoLock()
: CQueueClientInfoList
- x_AddClientInSplitter()
: CDockContainer
- x_AddClientInTab()
: CDockContainer
- x_AddClientToHiddenPos()
: CDockContainer
- x_AddColumnAliases()
: CAnalysisFile
- x_AddComment()
: CFlatGatherer
- x_AddConnection()
: CReader
- x_AddConnectionSlot()
: CReader, CId2Reader, CId1Reader, CCacheReader
- x_AddContig()
: CPhrapReader
- x_AddConversion()
: CSeq_loc_Mapper_Base
- x_AddConversionInfo()
: CReaderBase
- x_AddDefaultArgs()
: CNcbiApplication
- x_AddDefaultFieldsToShow()
: CBlastTabularInfo
- x_AddDesc()
: CArgDescriptions
- x_AddDescInfo()
: CTSE_Split_Info, CTSE_Chunk_Info
- x_AddDescrChunkId()
: CBioseq_Base_Info
- x_AddDummyTest()
: CNcbiTestApplication
- x_AddEnd()
: CSeqMap
- x_AddErrGetPut()
: SBDB_CacheUnitStatistics
- x_AddError()
: CNetBlastSubmittingJob
- x_AddExtraDllPath()
: CDllResolver
- x_AddFasta()
: CMakeBlastDBApp
- x_AddFeat_ids()
: CTSE_Chunk_Info
- x_AddFeature()
: CGuideTreeCalc, CGFFFormatter
- x_AddFeatureDesc()
: CGuideTreeCalc
- x_AddFeaturesById()
: CTSE_Info
- x_AddFeaturesLayout()
: CFeatureTrack
- x_AddFieldToShow()
: CBlastTabularInfo
- x_AddFilenameRow()
: CMultiFileInput
- x_AddFilenames()
: CMultiFileInput
- x_AddFilter()
: CSnpFilterUI
- x_AddFlavor()
: CClipboard
- x_AddFont()
: CPdfFontHandler
- x_AddFQ()
: IFlatQVal
- x_AddFTableBiosrcQuals()
: CFeatureItem
- x_AddFTableBondQuals()
: CFeatureItem
- x_AddFTableCdregionQuals()
: CFeatureItem
- x_AddFTableDbxref()
: CFeatureItem
- x_AddFTableExtQuals()
: CFeatureItem
- x_AddFTableGeneQuals()
: CFeatureItem
- x_AddFTableProtQuals()
: CFeatureItem
- x_AddFTablePsecStrQuals()
: CFeatureItem
- x_AddFTableQual()
: CFeatureItem
- x_AddFTableQuals()
: CFeatureItem
- x_AddFTableRegionQuals()
: CFeatureItem
- x_AddFTableRnaQuals()
: CFeatureItem
- x_AddFTableSiteQuals()
: CFeatureItem
- x_AddFullSeq_data()
: CCachedSequence
- x_AddGap()
: CSeqMap
- x_AddGBQualToFeature()
: CFeature_table_reader_imp
- x_AddGeneID()
: CGFFFormatter, CGFF3_Formatter
- x_AddGiInterval()
: CSplitParser
- x_AddGis()
: CWriteDB_IsamIndex
- x_AddGiString()
: CWriteDB_IsamIndex
- x_AddGiWhole()
: CSplitParser
- x_AddGoQuals()
: CFeatureItem
- x_AddGraph()
: CHitMatrixRenderer
- x_AddGraphs()
: CEpigenomicsTrack
- x_AddGraphToMap()
: CSGSeqGraphJob
- x_AddGSDBComment()
: CFlatGatherer
- x_AddHit()
: CCompartApp::CCompartment
- x_AddHIVModifiers()
: CAutoDefModifierCombo
- x_AddHour()
: CTime
- x_AddIconToImageList()
: CAppExplorerService
- x_AddId()
: CAlnStats< _TAlnIdVec >
- x_AddID()
: CFlatSeqLoc
- x_AddImageString()
: CPageList
- x_AddImprint()
: CReferenceItem
- x_AddInactiveImageString()
: CPageList
- x_AddIntergenicSpacerFeatures()
: CAutoDef
- x_AddInterval()
: CSplitParser
- x_AddIntervalToFeature()
: CFeature_table_reader_imp
- x_AddItem()
: CGBProjectTool, CFlatFileRetrieveJob, CFlatFeatureRetrieveJob, CItemSelectionPanel
- x_AddIter()
: CSyncQueue_ConstAccessGuard< Type, Container >
- x_AddJobRecord()
: CAppJobDispatcher
- x_AddKeyword()
: CKeywordsItem
- x_AddLandMarkFeaturesLayout()
: CGeneModelTrack
- x_AddLBCookie()
: CCgiApplication
- x_AddLevelRow()
: CTableSortMultiChoice
- x_AddLevels()
: CTableSortMultiChoice
- x_AddListenerToPool()
: CEventHandler
- x_AddLocal()
: CWriteDB_IsamIndex
- x_AddMainFeaturesLayout()
: CGeneModelTrack
- x_AddMasksForSeqId()
: CBuildDatabase
- x_AddMessage()
: CwxLogDiagHandler
- x_AddMiscRNAFeatures()
: CAutoDef
- x_AddMissingProteinMolInfo()
: CCleanup_imp
- x_AddMultiwayAlignment()
: CFastaReader
- x_AddNewEvent()
: CNCFileSystem
- x_AddNewRow()
: CColorPanel
- x_AddNewSegment()
: CMultiAligner
- x_AddNodesToMap()
: CDockLayoutTree
- x_AddNucleotidePattern()
: CSeqSearch
- x_AddObject()
: CAnnot_Collector
- x_AddObjectMapping()
: CAnnot_Collector
- x_AddObjectToSlot()
: CTimeLine< BV >
- x_AddOneRemoteSequence()
: CBuildDatabase
- x_AddOrgModString()
: CAutoDefModifierCombo
- x_AddPairwise()
: CMergedPairwiseAln
- x_AddPairwiseAlignments()
: CFastaReader
- x_AddPatent()
: CWriteDB_IsamIndex
- x_AddPattern()
: CSeqSearch, CFindRSites
- x_AddPdb()
: CWriteDB_IsamIndex
- x_AddPDBBlock()
: CDBSourceItem
- x_AddPIRBlock()
: CDBSourceItem
- x_AddPosition()
: CCpGIslands
- x_AddPostMappings()
: CAnnot_Collector
- x_AddPRFBlock()
: CDBSourceItem
- x_AddProductIdQuals()
: CFeatureItem
- x_AddProgramParams()
: CBLASTParams
- x_AddProject()
: CWorkspaceFolderPrx
- x_AddProtFeature()
: CPromote
- x_AddQual()
: CSourceFeatureItem, CFeatureItem
- x_AddQualCdsProduct()
: CFeatureItem
- x_AddQualCitation()
: CFeatureItem
- x_AddQualCodeBreak()
: CFeatureItem
- x_AddQualCodedBy()
: CFeatureItem
- x_AddQualCodonStart()
: CFeatureItem
- x_AddQualDb()
: CFeatureItem
- x_AddQualDbXref()
: CFeatureItem
- x_AddQualExceptions()
: CFeatureItem
- x_AddQualExpInv()
: CFeatureItem
- x_AddQualExt()
: CFeatureItem
- x_AddQualGeneXref()
: CFeatureItem
- x_AddQualifierToBioSrc()
: CFeature_table_reader_imp
- x_AddQualifierToCdregion()
: CFeature_table_reader_imp
- x_AddQualifierToFeature()
: CFeature_table_reader_imp
- x_AddQualifierToGene()
: CFeature_table_reader_imp
- x_AddQualifierToImp()
: CFeature_table_reader_imp
- x_AddQualifierToRna()
: CFeature_table_reader_imp
- x_AddQualityFeat()
: CPhrap_Read
- x_AddQualNote()
: CFeatureItem
- x_AddQualOldLocusTag()
: CFeatureItem
- x_AddQualOperon()
: CFeatureItem
- x_AddQualPartial()
: CFeatureItem
- x_AddQualProtActivity()
: CFeatureItem
- x_AddQualProtComment()
: CFeatureItem
- x_AddQualProtDesc()
: CFeatureItem
- x_AddQualProtEcNumber()
: CFeatureItem
- x_AddQualProteinConflict()
: CFeatureItem
- x_AddQualProteinId()
: CFeatureItem
- x_AddQualProtMethod()
: CFeatureItem
- x_AddQualProtNote()
: CFeatureItem
- x_AddQualPseudo()
: CFeatureItem
- x_AddQuals()
: CSourceFeatureItem, CFeatureItem, CFeatureItemBase
- x_AddQualsBond()
: CFeatureItem
- x_AddQualsCdregion()
: CFeatureItem
- x_AddQualSeqfeatNote()
: CFeatureItem
- x_AddQualsExt()
: CFeatureItem
- x_AddQualsGb()
: CFeatureItem
- x_AddQualsGene()
: CFeatureItem
- x_AddQualsProductId()
: CFeatureItem
- x_AddQualsProt()
: CFeatureItem
- x_AddQualsRegion()
: CFeatureItem
- x_AddQualsRna()
: CFeatureItem
- x_AddQualsSite()
: CFeatureItem
- x_AddQualTranslation()
: CFeatureItem
- x_AddQualTranslationException()
: CFeatureItem
- x_AddQualTranslationTable()
: CFeatureItem
- x_AddQuery()
: oligofar::CQueryHash
- x_AddQueueTask()
: CScheduler_MT
- x_AddRead()
: CPhrapReader
- x_AddReadLocFeats()
: CPhrap_Contig
- x_AddRecent()
: CSeqDBAtlas
- x_AddRemoteSequences()
: CBuildDatabase
- x_AddReplaceQual()
: CCleanup_imp
- x_AddRow()
: CLocationListCtrl
- x_AddRpsFreqsToCluster()
: CMultiAligner
- x_AddRptTypeQual()
: CFeatureItem
- x_AddRptUnitQual()
: CFeatureItem
- x_AddSavedName()
: CDataType
- x_AddScope()
: CScopeTransaction_Impl
- x_AddSegment()
: CSeqMap
- x_AddSegmentMapLayout()
: CSegmentMapTrack
- x_AddSeq_data()
: CTSE_Split_Info, CTSE_Chunk_Info
- x_AddSeq_dataChunkId()
: CBioseq_Info
- x_AddSeqEntries()
: CMakeBlastDBApp
- x_AddSequenceData()
: CMakeBlastDBApp
- x_AddSettingsSet()
: CThemeSet
- x_AddSetToList()
: CNCMMSizePool
- x_AddSNP()
: CSeq_annot_SNP_Info
- x_AddSnpsLayout()
: CSnpTrack
- x_AddSorted()
: CSnpFilterUI
- x_AddSPBlock()
: CDBSourceItem
- x_AddSplitSeqChunk()
: CCachedSequence
- x_AddStdString()
: CWriteDB_IsamIndex
- x_AddString()
: CWriteDB_IsamIndex
- x_AddStringData()
: CWriteDB_IsamIndex
- x_AddStringIds()
: CWriteDB_IsamIndex
- x_AddSubsourceString()
: CAutoDefModifierCombo
- x_AddSubtrack()
: CTrackContainer
- x_AddSynonym()
: CScope_Impl
- x_AddSystemView()
: CGBenchGUI
- x_AddTagFeats()
: CPhrap_Contig, CPhrap_Read
- x_AddTasks()
: CTaskViewModel
- x_AddTextId()
: CWriteDB_IsamIndex
- x_AddToExistingProject()
: CDataLoadingAppJob
- x_AddToIdx()
: CLDS_BuildIdIdx
- x_AddToLRUImpl()
: CNCMMDBPage
- x_AddToMustLeft()
: CNcbiTestTreeElement
- x_AddToMustRight()
: CNcbiTestTreeElement
- x_AddToProject()
: CDataMiningPanel
- x_AddToReadGroupNoLock()
: CQueue
- x_AddToRegistry()
: CODBCContext, CDBLibContext, CTLibContext
- x_AddToResults()
: CSequenceSearchJob, COrfSearchJob, CFeatureSearchJob, CCpgSearchJob, CComponentSearchJob, CFeatureSearchJob
- x_AddToSelection()
: CTextSelHandler, CLinearSelHandler
- x_AddToTaxidMap()
: CAltValidator
- x_AddTrace()
: CTracingHandler
- x_AddTraceIds()
: CWriteDB_IsamIndex
- x_AddTranslations()
: CSixFramesTransTrack
- x_AddTSE()
: CAnnot_Collector
- x_AddTSEAnnots()
: CDataSource
- x_AddTSEBioseqAnnots()
: CDataSource
- x_AddTSEOrphanAnnots()
: CDataSource
- x_AddTSESetWithAnnots()
: CScope_Impl
- x_AddUnloadedSeq_data()
: CSeqMap
- x_AddUseGiEntryInSeqalign()
: CSeqAlignFilter
- x_AddValue()
: CClipboard
- x_AddValueEx()
: CClipboard
- x_AddVariationsFromFeature()
: CSeqTextDataSource
- x_AddView()
: CFrameworkDemoGUI
- x_AddVolume()
: CSeqDBVolSet
- x_AddWhole()
: CSplitParser
- x_AddXref_ids()
: CTSE_Chunk_Info
- x_AddXX()
: CEmblFormatter
- x_AdjsutToMasterPane()
: CPhyloTreePane, CHitMatrixRenderer, CHitMatrixPane
- x_AdjustBottomRuler()
: CSeqTextPane
- x_AdjustColumns()
: CAlnSpanVertModel, CAlnTableDS
- x_AdjustCrossPane()
: CCrossAlnRenderer
- x_AdjustDay()
: CTime
- x_AdjustLeftRuler()
: CSeqTextPane
- x_AdjustProgram()
: CRemoteBlast
- x_AdjustSeqTypesToProt()
: CSeq_loc_Mapper_Base
- x_AdjustTime()
: CTime
- x_AdjustTimeImmediately()
: CTime
- x_AdjustToAlgoSelector()
: CCleanupAlignmentsParamsPanel
- x_AdjustToMaster()
: CSeqGraphicRenderer
- x_AdjustToMinScale()
: CSeqGraphicRenderer
- x_AdjustVisible()
: CAlnMultiWidget
- x_AdjustVisibleRect()
: CGlPane
- x_AdvanceChunkPtr()
: CNCMMChunksPool
- x_AdvanceEOLCRLF()
: CStreamLineReader
- x_AdvanceEOLSimple()
: CStreamLineReader
- x_AdvanceEOLUnknown()
: CStreamLineReader
- x_AdvanceGiList()
: CSeqDBIsam
- x_AdvanceIsamIndex()
: CSeqDBIsam
- x_Align()
: CSplicedAligner32, CSplicedAligner16, CPSSMAligner, CBandAligner, CNWAligner
- x_Align_Impl()
: CNgAligner
- x_AlignClusterQueries()
: CMultiAligner
- x_AlignFillerBlocks()
: CMultiAligner
- x_AlignInClusters()
: CMultiAligner
- x_AlignProfile()
: CPSSMAligner
- x_AlignProfileProfile()
: CMultiAligner
- x_AlignProfileProfileUsingHit()
: CMultiAligner
- x_AlignProgressive()
: CMultiAligner
- x_AlignPSSM()
: CPSSMAligner
- x_AlignSizeToPage()
: CNCMMCentral
- x_AlignToBottom()
: CNCMMCentral
- x_AlignToTop()
: CNCMMCentral
- x_Alloc()
: CSeqDB_BitSet
- x_AllocAlignedLongWay()
: CNCMMCentral
- x_Allocate()
: CSimpleBufferT< T, ResizeStrategy >
- x_AllocateBlock()
: CNCMMSizePool
- x_AllocateQueue()
: CQueueDataBase
- x_AllocBuffer()
: CScoringJob
- x_AllocConnection()
: CReader
- x_AllocHash()
: CNCMMDBPagesHash
- x_AllocType()
: CSeqDBVol
- x_Allowed()
: CPhyloTreeFilter_Depth, CPhyloTreeFilter_Distance, CPhyloTreeFilter_Export, CPhyloTreeFilter_Selector, IPhyloTreeFilter
- x_AllowHIVRule()
: CAutodefParamsPanel
- x_AllViewsItemSelected()
: CProjectTreePanel
- x_AlnRangeFromSeqRange()
: CAlignMarkHandler
- x_AlreadyContains()
: CQuerySet
- x_AnnotBrowserSelectionChanged()
: CwxAnnotConfigDlg
- x_Append()
: CTar, CGeneInfo, CStringUTF8
- x_AppendChar()
: CStringUTF8
- x_AppendEncoded()
: CGFF3_Formatter
- x_AppendFile()
: CTar
- x_AppendOptionForManager()
: COpenDlg
- x_AppendSubNode()
: CSeqDBAliasNode
- x_AppendToReadView()
: CGuiRegistry::CReadView
- x_AppendToView()
: CGuiRegistry
- x_ApplyFilter()
: CSnpTableJob, CSnpTableData
- x_ApplyInteractions()
: CBlastOptionsBuilder
- x_ApplyNegativeList()
: CSeqDBOIDList
- x_ApplyPatches()
: CDataLoaderPatcher
- x_ApplyToFrameContainer()
: CDockManager
- x_ApplyTranscript()
: CNWFormatter
- x_ApplyUserGiList()
: CSeqDBOIDList
- x_Approve()
: CRequestRateControl
- x_AreAllDescriptorsInSetIdentical()
: CCleanup_imp
- x_AreMastersBusy()
: CGridWorkerNode
- x_ArgsToBlastOptions()
: CBLASTParams
- x_ArgumentMatch()
: CNetServProtoParserBase
- x_AsBasicString()
: CStringUTF8
- x_AsBitString()
: CBase64BinaryDataType, COctetStringDataType
- x_AscendToRoot()
: CPhyloTreeDataSource
- x_AssertIndexValid()
: CSelectionControl
- x_AssertNotOpen()
: CGlPane
- x_AssertOrtho()
: CGlPane
- x_AssertRowValid()
: CObjectListTableModel, CSparseAlignment
- x_AssertValid()
: CObjectList
- x_AssertValidColumn()
: CObjectList
- x_AssertValidRow()
: CObjectList
- x_Assign()
: CPackString, CTSE_Lock, CHTMLException, CAlnVecMultiDataSource, CDB_MultiEx, CDB_SQLEx, CDB_RPCEx, CDB_Exception, CException, CPIDGuardException, CExprParserException, CCgiException
- x_AssignCmdParams()
: CNCMessageHandler
- x_AssignDefaultResFreqs()
: CMultiAligner
- x_AssignErrCode()
: CException
- x_AssignId()
: CMaskInfoRegistry
- x_AssignParams()
: CODBC_BCPInCmd, CODBC_RPCCmd, CODBC_LangCmd, CDBL_BCPInCmd, CDBL_CursorCmd, CDBL_RPCCmd, CDBL_LangCmd, CTL_BCPInCmd, CTL_CursorCmdExpl, CTL_CursorCmd, CTL_RPCCmd, CTL_LangCmd
- x_AssignParents()
: CFeatTree
- x_AssignParentsByOverlap()
: CFeatTree
- x_AssignParentsByRef()
: CFeatTree
- x_AssignRPSResFreqs()
: CMultiAligner
- x_AssignViewIndex()
: CGBDocument
- x_AtLeastOneProjectLoaded()
: CProjectTreePanel
- x_Attach()
: CSplitParser
- x_AttachAnnot()
: CScope_Impl, CBioseq_Base_Info
- x_AttachClusterTrees()
: CMultiAligner
- x_AttachContents()
: CSeq_entry_Info
- x_Attached()
: CTSE_Chunk_Info
- x_AttachEntry()
: CScope_Impl, CBioseq_set_Info
- x_AttachMap()
: CBioseq_Info
- x_AttachObject()
: CTSE_Info_Object
- x_AttachPage()
: CNCMMDBCache
- x_AttachProjectItem()
: CProjectPrx
- x_AttachProjectItems()
: CProjectPrx
- x_AttachToOM()
: CScope_Impl
- x_AttachToPool()
: CThreadPool_Controller
- x_AttachToProject()
: CProjectViewBase
- x_AttachTSE()
: CScopeInfo_Base, CBioseq_ScopeInfo
- x_AttachValue()
: CBlastOptionsRemote
- x_AttachView()
: CGBDocument
- x_AttribType()
: DTDParser
- x_AttribValue()
: DTDParser
- x_Authors()
: CGenbankFormatter
- x_AutoComplete()
: CAutoCompleteCombo
- x_AutoDetectGeneticCodes()
: CBlastQuerySourceOM
- x_AutoGuessFormat()
: CFileLoadManager
- x_AutoStartMonitoring()
: CNetBLASTUIDataSource
- x_Available()
: CwxClipboardHelper< wxString >, CwxClipboardHelper< T >
- x_BackgroundJob()
: CSGGenBankDS, CAnnotCompareDS
- x_Backspace()
: CTar
- x_BackTrace()
: oligofar::TAligner_SW< CQuery, CSubject >
- x_BackupEndPos()
: CSeqVector_CI
- x_BackupName()
: CRotatingLogStream
- x_BackupPos()
: CSeqVector_CI
- x_BackupSize()
: CSeqVector_CI
- x_Bad()
: CStaticArraySearchBase< KeyValueGetter, KeyCompare >
- x_BarcodeComment()
: CFlatGatherer
- x_BaseParentAttach()
: CTSE_Info_Object
- x_BaseParentDetach()
: CTSE_Info_Object
- x_BaseToIndex()
: CMatrixScoringMethod
- x_Begin()
: CSyncQueue< Type, Container >
- x_BeginNamespace()
: CObjectOStreamXml
- x_BestFont()
: CPhyloTreeLabel
- x_BindParam_ODBC()
: CStatementBase
- x_BinN()
: CDensityMap< CntType >
- x_BioseqSanityCheck()
: CBlastQuerySourceBioseqSet
- x_BlkSetHints()
: CTL_BCPInCmd
- x_BooleanSetOperation()
: CSeqDBIdSet
- x_BoxCharacters()
: CSequenceTextGraph
- x_Brighter()
: CPhyloTreeNode
- x_Broadcast()
: CSelectionService
- x_BrowserClicked()
: CFeatCheckBrowser
- x_Buf
: CConn_Streambuf, CRWStreambuf
- x_BufferGetColumn()
: CScoringJob
- x_BufferGetSeq()
: CScoringJob
- x_BuildAlignDataSource()
: CSGAlignmentJob
- x_BuildAlignment()
: CMultiAligner
- x_BuildAlignmentIterative()
: CMultiAligner
- x_BuildAncillaryData()
: CBl2Seq
- x_BuildDatabase()
: CMakeBlastDBApp
- x_BuildDeflinesFromBioseq()
: CWriteDB_Impl
- x_BuildFullTree()
: CMultiAligner
- x_BuildGetSeqPartsRequest()
: CBlastServices
- x_BuildGetSeqRequest()
: CBlastServices
- x_BuildGraph()
: CObjectConverter
- x_BuildHeaderFields()
: CWriteDB_GiMaskIndex, CWriteDB_ColumnIndex
- x_BuildHeaderStrings()
: CWriteDB_ColumnIndex
- x_BuildHtmlBar()
: CVecscreen
- x_BuildHtmlTable()
: CAlnGraphic
- x_BuildMaskAlgorithmList()
: CSeqDBImpl
- x_BuildMatrix()
: oligofar::TAligner_SW< CQuery, CSubject >
- x_BuildMetaData()
: CWriteDB_ColumnIndex
- x_BuildNonOverlappingRange()
: CVecscreen
- x_BuildObjectList()
: CLDBlockGlyph, CGwasGlyph, CBinsGlyph
- x_BuildQueryFromPssm()
: CBlastFormatterApp
- x_BuildTreeItems()
: CBLAST_DB_Dialog
- x_BuildVisibleBranch()
: CDockContainer
- x_BuildVisibleTree()
: CDockContainer
- x_byCount()
: CValuesCount
- x_BytesNeeded()
: CStringUTF8
- x_CacheEndPos()
: CSeqVector_CI
- x_CacheItems()
: CResultSet
- x_CacheOffset()
: CSeqVector_CI
- x_CachePos()
: CSeqVector_CI
- x_CacheSize()
: CSeqVector_CI
- x_CalcBioseqLength()
: CBioseq_Info
- x_CalcColorStep()
: CRgbaColorTable
- x_CalcConfigValue()
: CNcbiTestApplication
- x_CalcCoords()
: CNCBitMaskBase< num_elems >
- x_CalcDivergenceMatrix()
: CGuideTreeCalc
- x_CalcEmptyGrade()
: CNCMMBlocksSet, CNCMMSlab
- x_CalcFeatHistRecursive()
: CSGCalcFeatHistJob
- x_CalcFingerPrint64()
: CNWAligner
- x_CalcIntervals()
: CSGFeatureJob, CRnaCdsGroup, CAlignGlyph, CLayoutSwitchPoints, CLayoutSeqMap, CLayoutPWAlign, CLayoutObject, CLayoutFeat
- x_CalcLength()
: CSeqMap_CI_SegmentInfo
- x_CalcMaxLabelSize()
: CGlDrawScale
- x_CalcMemoryMode()
: CNCMMCentral
- x_CalcMinPanelSize()
: CRunToolDlg
- x_CalcNbins()
: CDensityMap< CntType >
- x_CalcRunLength()
: CDenMapRunIterator< CntType >
- x_CalcTextPos()
: CTextSelectItem
- x_Calculate()
: CPhyloSlantedCladogram, CPhyloRectCladogram, CPhyloRadial, CPhyloForce
- x_CalculateAlignmentScores()
: CScoringJob
- x_CalculateConsensusScores()
: CColumnScoringMethod
- x_CalculateEncoding()
: CWString
- x_CalculateHintRect()
: CDockContainer
- x_CalculateHitsRange()
: CHitMatrixDataSource
- x_CalculateLayout()
: CMapControl
- x_CalculateMasks()
: CBlastQuerySourceOM
- x_CalculateMinSizes()
: CSplitter
- x_CalculateNonConsensusScores()
: CColumnScoringMethod
- x_CalculateNumberOfSlices()
: CCachedSeqDataForRemote
- x_CalculateOffsetList()
: CSeqTextPane
- x_CalculatePosLabelsStep()
: CRuler
- x_CalculateRealTextWidth()
: CMapItem
- x_CalculateScore
: CAlnMixSegments, CAlnMix, CAlnMixMerger, CAlnMixMatches
- x_CalculateSequenceScores()
: CScoringJob
- x_CalculateTotalRangeCheckId()
: CSeq_loc
- x_CalcWindowStats()
: CCpGIslands
- x_CallUserFuncs()
: CNcbiTestApplication
- x_CanAddImmediateTask()
: CThreadPool_Impl
- x_CanBeSavedAsLink()
: CProjectService
- x_CancelAllTasks_OnThread()
: CSchedulerEngine
- x_CancelExecutingTasks()
: CThreadPool_Impl
- x_CancelJob()
: CRemoteAppDispatcher, CFeatureGraph
- x_CancelQueuedTasks()
: CThreadPool_Impl
- x_CancelSearch()
: CDataMiningPanel
- x_CancelSelRectMode()
: CHitMatrixGraph
- x_CancelTask_OnThread()
: CSchedulerEngine
- x_CanCombine()
: CHitClustering
- x_CanCommitRollBack()
: CScopeTransaction_Impl, IScopeTransaction_Impl
- x_CanCreateRowBased()
: CHitMatrixDataSource
- x_CanGetDescr()
: CBioseq_set_Info, CBioseq_Info, CBioseq_Base_Info
- x_CanInsertRng()
: CMergedPairwiseAln
- x_CanOptimize()
: CAlignGlyph
- x_CanPasteProjectFolder()
: CAppExplorerService
- x_CanRenderSeq()
: CAlnVecRow
- x_CanResolve()
: CSeqMap_CI
- x_CanShowPopup()
: CMessageSlot
- x_CanUpdateCutOrCopy()
: CProjectTreePanel, CAppExplorerCmdHandler
- x_CaptureMouse()
: CMouseZoomHandler
- x_CategorizeDBs()
: CNetBLASTUIDataSource
- x_CDShasLowQualityException()
: CDeflineGenerator
- x_ChangeCitationQualToCitationPub()
: CCleanup_imp
- x_ChangeCitSub()
: CCleanup_imp
- x_ChangeCurrentStatus()
: CBDB_Volumes
- x_ChangeGBDiv()
: CCleanup_imp
- x_ChangeGenBankBlocks()
: CCleanup_imp
- x_ChangeGroupStatus()
: CQueue
- x_ChangeImpFeatToCDS()
: CCleanup_imp
- x_ChangeImpFeatToProt()
: CCleanup_imp
- x_ChangeInsertionSeqToMobileElement()
: CCleanup_imp
- x_ChangeNoteQualToComment()
: CCleanup_imp
- x_ChangeSwitchPoint()
: CSeqGraphicPane
- x_ChangeToMix()
: CSeq_loc
- x_ChangeToPackedInt()
: CSeq_loc
- x_ChangeToPackedPnt()
: CSeq_loc
- x_ChangeTransposonToMobileElement()
: CCleanup_imp
- x_Check()
: CSeq_id_Other_Tree, CSeq_id_Named_annot_track_Tree, CSeq_id_Gpipe_Tree, CSeq_id_Tpd_Tree, CSeq_id_Tpe_Tree, CSeq_id_Tpg_Tree, CSeq_id_Prf_Tree, CSeq_id_Swissprot_Tree, CSeq_id_Pir_Tree, CSeq_id_GB_Tree, CSeq_id_Textseq_Tree, CSeq_id_Gi_Tree, CSeq_id_Gibbmt_Tree, CSeq_id_Gibbsq_Tree, CSeq_id_int_Tree, CSeq_id_not_set_Tree, CDiagFilter, CSoapMessage, CScopeInfo_Base, CBlobStorage_NetCache
- x_CheckAccess()
: CNetScheduleHandler
- x_CheckAdded()
: CTSE_ScopeInfo
- x_CheckAddr()
: CDebugDumpViewer
- x_CheckAdjusted()
: CSeqDBMapStrategy
- x_CheckArgs()
: CQueryFunctionEQ
- x_CheckAutoHelp()
: CArgDescriptions
- x_CheckBackward()
: CSeqVector_CI
- x_CheckCancelled()
: CTextRetrieveJob
- x_CheckChanges()
: CSnpFilterUI
- x_CheckCodingRegionEnds()
: CCleanup_imp
- x_CheckConfig()
: CRemoteBlast
- x_CheckConflictFlag()
: CCleanup_imp
- x_CheckConstructBuffers()
: CBDB_File
- x_CheckControls()
: CwxAnnotConfigDlg
- x_CheckDataStatus()
: COpenViewlDlgTask
- x_CheckDBInitialized()
: CNCBlobStorage
- x_CheckExecutionTimeout()
: CQueue
- x_CheckField()
: CCgiCookies, CCgiCookie
- x_CheckFlags()
: IRegistry
- x_CheckFlagsValidity()
: CSQLITE_Connection
- x_CheckForStructureLink()
: CShowBlastDefline
- x_CheckForward()
: CSeqVector_CI
- x_CheckGappedAlignmentResults()
: CPhiblastTestFixture
- x_CheckGenbankBlockTechKeywords()
: CCleanup_imp
- x_CheckGi()
: CSeq_annot_SNP_Info
- x_CheckGradeChange()
: CNCMMSizePool
- x_CheckHashContent()
: CCacheHashedContent
- x_CheckId()
: CSeq_loc
- x_CheckIncreasingBestEvalues()
: CPhiblastTestFixture
- x_CheckJobStatus()
: CRemoteAppDispatcher, CGridCgiApplication
- x_CheckLocation()
: CDebugDumpViewer
- x_CheckMemoryLimit()
: CSplicedAligner, CBandAligner, CNWAligner, CMMAligner
- x_CheckMolInfoConsistency()
: CCleanup_imp
- x_CheckNotValid()
: CSeq_loc_CI
- x_CheckOrFindOID()
: CSeqDBImpl
- x_CheckParameters()
: CBandAligner
- x_CheckReadOnly()
: CNCBlobStorage
- x_CheckResults()
: CRemoteBlast
- x_CheckSeqTypes()
: CSeq_loc_Mapper_Base
- x_CheckSequence()
: CNWAligner
- x_CheckSplitResults()
: CPhiblastTestFixture
- x_CheckStatus()
: CCgiSession_NetCache
- x_CheckStatusChange()
: CBDB_Volumes
- x_CheckStopped()
: CNCBlobStorage
- x_CheckStopPurge()
: CQueueDataBase
- x_CheckTimestampExpired()
: CDBAPI_Cache
- x_CheckTimeStampExpired()
: CBDB_Cache
- x_CheckToken()
: CAffinityDict
- x_CheckVersion()
: CNetScheduleHandler
- x_CheckVersions()
: CSeqDBVol
- x_CheckWhich()
: CSeq_entry_Info
- x_ChildLockAction()
: CCompoundRWRegistry, CTwoLayerRegistry, CCompoundRegistry, IRegistry, CEnvironmentRegistry
- x_Choice()
: CRemapClient_Base, CMLAClient_Base, CID2Client_Base, CID1Client_Base, CEntrez2Client_Base, CBlast4Client_Base, CXmlRetrieveJob, CGBenchService_Base
- x_ChoiceMember()
: CXmlRetrieveJob
- x_ChooseFontForSize()
: CSeqTextPane
- x_ChooseTickSpace()
: CRuler
- x_Clamp()
: CRgbaColor, CVisibleRangeEvent, CVisibleRange
- x_Class()
: CXmlRetrieveJob
- x_ClassMembers()
: CXmlRetrieveJob
- x_CleanData()
: CReferenceItem
- x_CleanGenbankBlockStrings()
: CCleanup_imp
- x_CleanOrgNameStrings()
: CCleanup_imp
- x_CleanOrphantBlobs()
: CDBAPI_Cache
- x_CleanParamMap()
: CQueueDataBase
- x_CleanPoolSpace()
: CNCMMChunksPool
- x_CleanQuals()
: CFeatureItem
- x_CleanRangeMaps()
: SIdAnnotObjs
- x_CleanStateSpans()
: CNCMessageHandler
- x_CleanTimeLine()
: CRequestRateControl
- x_Cleanup()
: CConn_Streambuf, CElementaryMatching, CSafeStaticPtr_Base, CAutoInitPtr_Base
- x_CleanUp()
: CSampleEditSaver, CString2Args
- x_Cleanup_AlignVec()
: CAlignCleanup
- x_Cleanup_AnchoredAln()
: CAlignCleanup
- x_CleanupConsSplice()
: CCleanup_imp
- x_CleanupExcept_text()
: CCleanup_imp
- x_CleanupRna()
: CCleanup_imp
- x_CleanupRptUnit()
: CCleanup_imp
- x_CleanUpTaxName()
: CAutoDefModifierCombo
- x_CleanupUnusedEntries()
: CDataSource
- x_CleanupUserString()
: CCleanup_imp
- x_CleanVolumes()
: CElementaryMatching
- x_Clear()
: CGetFeature, CAnnot_Collector, CSplitter, CSelectionControl, CSnpFilterUI, CObjectListTableModel, CObjectList, CHitMatrixDSBuilder, CHitMatrixDataSource, CAlnSpanVertModel, CSelListModelImpl< Item >, CAlignedFeatureGraph, CAlnMultiDSBuilder, CClipboard, CNcbiRegistry, CCompoundRWRegistry, CTwoLayerRegistry, CMemoryRegistry, IRWRegistry, CEnvironmentRegistry, CNetScheduleKeys, COStreamHelper
- x_Clear_NonBlocking()
: CSyncQueue< Type, Container >
- x_ClearAnnotCache()
: CScope_Impl
- x_ClearAnnotTypesSet()
: SAnnotSelector
- x_ClearBit()
: CSeqDBBitVector
- x_ClearBitRange()
: CSeqDBOIDList
- x_ClearCache()
: CSeqVector_CI
- x_ClearCacheOnEdit()
: CScope_Impl
- x_ClearCacheOnNewAnnot()
: CScope_Impl
- x_ClearCacheOnNewData()
: CScope_Impl
- x_ClearCacheOnNewDS()
: CScope_Impl
- x_ClearCacheOnRemoveAnnot()
: CScope_Impl
- x_ClearCacheOnRemoveData()
: CScope_Impl
- x_ClearClipboardData()
: CAppExplorerService
- x_ClearContent()
: CLayoutTrack, CGlyphContainer
- x_ClearDatabases()
: CNetBLASTUIDataSource
- x_ClearHandles()
: CSparseMultiDataSource, CAlnVecMultiDataSource
- x_ClearHaveSequence()
: CWriteDB_Impl
- x_ClearHits()
: CHitMatrixDataSource
- x_ClearItems()
: CSelListModelImpl< Item >, CAlnMultiModel
- x_ClearRecent()
: CSeqDBAtlas
- x_ClearScoreToParamsMap()
: CHitMatrixWidget
- x_ClearStatusBar()
: CGBenchGUI
- x_Clicked()
: CFeatureTypesBrowser
- x_ClipPosByRange()
: CTextSelHandler, CLinearSelHandler, CAlignMarkHandler
- x_Clone()
: CInvalidChoiceSelection, CBlobStateException, CDB_MultiEx, CDB_TruncateEx, CDB_ClientEx, CDB_TimeoutEx, CDB_DeadlockEx, CDB_SQLEx, CDB_RPCEx, CDB_DSEx, CParseTemplException< TBase >, CErrnoTemplException< TBase >, CErrnoTemplExceptionEx< TBase, PErrCode, PErrStr >, CCoreException, CException
- x_Close()
: CTar, CODBCContext, CDBLibContext, CTL_RPCCmd, CTLibContext, CBDB_RawFile, CBDB_Cache, CMemoryFileMap
- x_CloseAllViews()
: CGBenchGUI, CFrameworkDemoGUI
- x_CloseBlob()
: CSQLITE_Blob
- x_CloseClient()
: CWindowManager
- x_CloseConnection()
: CNCMessageHandler
- x_CloseDataSources()
: CUIDataSourceService
- x_CloseGap()
: CCustomizedFastaReader, CFastaReader
- x_CloseMask()
: CMaskFromFasta, CFastaReader
- x_CloseWorkspace()
: CGBenchGUI, CProjectTask
- x_ClrAmb()
: CSeqDBIdxFile
- x_ClrHdr()
: CSeqDBIdxFile
- x_ClrSeq()
: CSeqDBIdxFile
- x_CmdAlloc()
: CTL_Connection
- x_CmpSequenceData()
: CSplitQueryTestFixture
- x_CodeToFaultcodeEnum()
: CSoapFault
- x_CollapseSubtrees()
: CGuideTree
- x_CollectAllTests()
: CNcbiTestApplication
- x_CollectAllTo()
: CNCMMStats
- x_CollectBioseqs()
: CDataSource
- x_CollectBioSources()
: CFlatGatherer
- x_CollectBioSourcesOnBioseq()
: CFlatGatherer
- x_CollectNeeded()
: CFeatTree
- x_CollectSegments()
: CPrimaryItem
- x_CollectSourceDescriptors()
: CFlatGatherer
- x_CollectSourceFeatures()
: CFlatGatherer
- x_CollectTo()
: CNCServerStat
- x_ColorspaceUpdatePenalty()
: oligofar::CAligner
- x_ColorToUserField()
: CSGConfigUtils
- x_CombineLocs()
: CMaskedRangeSet
- x_CombineSplitQual()
: CCleanup_imp
- x_CombineWith()
: CRangeCollection< Position >
- x_CommentLine()
: CWig2tableApplication
- x_Common()
: CCleanup_imp
- x_CommonNodeSearch()
: CPhyloTreeDataSource
- x_CompactBuffer()
: CBufferedSockReaderWriter
- x_Compare()
: CPackString::SNode, CCompareSeq_locs
- x_CompareAdjacentSegTypes()
: CAlnMap
- x_CompareChainScores()
: CAlnMixSequences, CAlnMixMatches
- x_CompareCompLists()
: CCommonComponentScorer
- x_CompareFourIntRecords()
: CGeneFileWriter
- x_CompareInts()
: CCompareSeq_locs
- x_CompareOneAlign()
: CSeqAlignCmp
- x_CompareScores()
: CAlnMixSequences, CAlnMixMatches
- x_CompareSequenceData()
: CSequenceDataTester
- x_CompareStrings()
: CValidError_bioseq
- x_CompareTwoIntRecords()
: CGeneFileWriter
- x_Compartment2SeqAlign()
: CSplignFormatter
- x_CompartPair()
: CElementaryMatching
- x_CompartVolume()
: CElementaryMatching
- x_ComplementData()
: CBlastSeqVectorFromCSeq_data
- x_CompleteInsertion()
: CSelListModelImpl< Item >, CAlnMultiModel
- x_CompressFile()
: CCompression
- x_ComputeBlastTypePair()
: CBlastFormat
- x_ComputeChunkRanges()
: CQuerySplitter
- x_ComputeClusterTrees()
: CMultiAligner
- x_ComputeContextOffsets_NonTranslatedQueries()
: CQuerySplitter
- x_ComputeContextOffsets_TranslatedQueries()
: CQuerySplitter
- x_ComputeContextOffsetsForChunks()
: CQuerySplitter
- x_ComputeExpTime()
: CBDB_Cache
- x_ComputeFilters()
: CSeqDBOIDList
- x_ComputeHash()
: CWriteDB_Impl
- x_ComputeInformativeLength()
: oligofar::CQuery
- x_ComputeMasks()
: CSeqDBAliasFile
- x_ComputeOverlapValues()
: CCompareSeq_locs
- x_ComputePackOpt()
: CBDB_BufferManager
- x_ComputeProfileRangeAlignment()
: CMultiAligner
- x_ComputePssmForNextIteration()
: CPsiBlastTestFixture
- x_ComputeQueryChunkBounds()
: CSplitQueryTestFixture
- x_ComputeQueryContextsForChunks()
: CQuerySplitter
- x_ComputeQueryIndicesForChunks()
: CQuerySplitter
- x_ComputeSeqLength()
: CWriteDB_Impl
- x_ComputeSerializationSize()
: CBDB_ExtBlobMap
- x_ComputeTracebak()
: CTracebackTestFixture
- x_ComputeTree()
: CGuideTreeCalc, CMultiAligner
- x_ConfigCShowBlastDefline()
: CBlastFormat
- x_ConfigUIToolRegistry()
: CGBenchApplication
- x_ConfigureBottomRuler()
: CSeqTextPane
- x_ConfigureSubtracks()
: CFeaturePanel
- x_ConfigureSubtracks_Recursive()
: CFeaturePanel
- x_ConfigureTracks()
: CFeaturePanel
- x_ConnDescription()
: CId2ReaderBase, CId2Reader, CId1Reader
- x_Connect()
: CRPCClient< TRequest, TReply >, CRemapClient, CMLAClient_Base, CID2Client_Base, CID1Client_Base, CGBenchService, CODBC_Connection, CSysLog
- x_ConnectAtSlot()
: CReader, CId2Reader, CId1Reader, CCacheReader
- x_ConnectDocument()
: CProjectService
- x_ConnectURL()
: CRPCClient< TRequest, TReply >
- x_ConsolidateGaps()
: CAlnMixSegments
- x_ConsolidateListOfMasks()
: CMaskWriterBlastDbMaskInfo
- x_Consortium()
: CGenbankFormatter
- x_Construct()
: oligofar::CScoringFactory
- x_ConstructDataBuf()
: CBDB_File
- x_ConstructKeyBuf()
: CBDB_File
- x_Container()
: CXmlRetrieveJob
- x_Contains()
: CRangeCollection< Position >
- x_ContextInChunkToQueryIndex()
: CQueryDataPerChunk
- x_Convert()
: oligofar::CScoreTbl, CGBankLoadingJob
- x_Convert2()
: oligofar::CQueryHash
- x_Convert2naExpandTo2na()
: CSeqConvert_imp
- x_Convert2naExpandTo4na()
: CSeqConvert_imp
- x_Convert2naExpandTo8na()
: CSeqConvert_imp
- x_Convert2naExpandToIupacna()
: CSeqConvert_imp
- x_Convert2naTo2naExpand()
: CSeqConvert_imp
- x_Convert2naTo4na()
: CSeqConvert_imp
- x_Convert2naTo8na()
: CSeqConvert_imp
- x_Convert2naToIupacna()
: CSeqConvert_imp
- x_Convert4()
: oligofar::CQueryHash
- x_Convert4ag()
: oligofar::CQueryHash
- x_Convert4naTo2na()
: CSeqConvert_imp
- x_Convert4naTo2naExpand()
: CSeqConvert_imp
- x_Convert4naTo8na()
: CSeqConvert_imp
- x_Convert4naToIupacna()
: CSeqConvert_imp
- x_Convert4tc()
: oligofar::CQueryHash
- x_Convert8naTo2na()
: CSeqConvert_imp
- x_Convert8naTo2naExpand()
: CSeqConvert_imp
- x_Convert8naTo4na()
: CSeqConvert_imp
- x_Convert8naToIupacna()
: CSeqConvert_imp
- x_ConvertAlign()
: CSeq_align_Mapper_Base
- x_ConvertAlignCvt()
: CSeq_align_Mapper
- x_ConvertAmbig()
: CSeqportUtil_implementation
- x_ConvertContig()
: CPhrapReader
- x_ConvertEaaToIupacaa()
: CSeqConvert_imp
- x_ConvertEaaToStdaa()
: CSeqConvert_imp
- x_ConvertFullLenFeatureToDescriptor()
: CCleanup_imp
- x_ConvertFullLenPubFeatureToDescriptor()
: CCleanup_imp
- x_ConvertIupacaaToEaa()
: CSeqConvert_imp
- x_ConvertIupacaaToStdaa()
: CSeqConvert_imp
- x_ConvertIupacnaTo2na()
: CSeqConvert_imp
- x_ConvertIupacnaTo2naExpand()
: CSeqConvert_imp
- x_ConvertIupacnaTo4na()
: CSeqConvert_imp
- x_ConvertIupacnaTo8na()
: CSeqConvert_imp
- x_ConvertIupacnaToIupacna()
: CSeqConvert_imp
- x_ConvertOrgDescToSourceDescriptor()
: CCleanup_imp
- x_ConvertOrgFeatToSource()
: CCleanup_imp
- x_ConvertRow()
: CSeq_align_Mapper_Base
- x_ConvertRowCvt()
: CSeq_align_Mapper
- x_ConvertSegment()
: CSeq_align_Mapper_Base
- x_ConvertSegmentCvt()
: CSeq_align_Mapper
- x_ConvertStdaaToEaa()
: CSeqConvert_imp
- x_ConvertStdaaToIupacaa()
: CSeqConvert_imp
- x_ConvertToNcRNA()
: CCleanup_imp
- x_ConvertUpstream()
: CPhyloTreeDataSource
- x_ConvertUserObjectToAnticodon()
: CCleanup_imp
- x_ConvToDstDisc()
: CSeq_align_Mapper_Base
- x_CookColumns()
: CWriteDB_Impl
- x_CookData()
: CWriteDB_Impl
- x_CookHeader()
: CWriteDB_Impl
- x_CookIds()
: CWriteDB_Impl
- x_CookSequence()
: CWriteDB_Impl
- x_Copy()
: CSeqDB_BitSet, CNcbiTable< TValue, TRow, TColumn >, CAnyContentObject, CBlastDbBlob
- x_Copy2Pending()
: CCompartmentAccessor< THit >
- x_Copy_CBlastDatabaseOptions()
: CBlastOptionsLocal
- x_Copy_CBlastEffectiveLengthsOptions()
: CBlastOptionsLocal
- x_Copy_CBlastExtensionOptions()
: CBlastOptionsLocal
- x_Copy_CBlastHitSavingOptions()
: CBlastOptionsLocal
- x_Copy_CBlastInitialWordOptions()
: CBlastOptionsLocal
- x_Copy_CBlastScoringOptions()
: CBlastOptionsLocal
- x_Copy_CLookupTableOptions()
: CBlastOptionsLocal
- x_Copy_CPSIBlastOptions()
: CBlastOptionsLocal
- x_Copy_CQuerySetUpOptions()
: CBlastOptionsLocal
- x_CopyBits()
: CSeqDB_BitSet
- x_CopyCdregionToRNA()
: CPromote
- x_CopyCDSFromCDNA()
: CFlatGatherer
- x_CopyFrom()
: CAppJobProgress
- x_CopyLocalFile()
: CRemoteAppRequestMB_Impl
- x_CopyQueryToMsa()
: CPsiBlastInputData, CPsiBlastInputClustalW
- x_CorrectScale()
: CGlPane
- x_CorruptedDatabase()
: CNCBlob
- x_Count()
: oligofar::CBitHacks
- x_CountAdjacentNs()
: CValidError_bioseq
- x_CountAndSelectQualifyingAlignments()
: CPsiBlastInputData
- x_CountBits()
: CValidError_align
- x_CountMismatches()
: oligofar::CGuideFile
- x_CountNodes()
: CTaxTreeBrowser
- x_Create()
: CWGLDemoApp, CPrintOptionsDlg, CSaveImageDlg, CPrintDlg, CBDB_RawFile, CMemoryFileMap
- x_CreateAlign()
: CPhrap_Contig
- x_CreateAlignAll()
: CPhrap_Contig
- x_CreateAlignOptimized()
: CPhrap_Contig
- x_CreateAlignPairs()
: CPhrap_Contig
- x_CreateAlnStarts()
: CAlnMap
- x_CreateAlnVecDataSource()
: CAlnMultiDSBuilder
- x_CreateArg()
: CArgDescriptions
- x_CreateBioseq()
: CBlastInputReader
- x_CreateBioseqInfo()
: CTSE_ScopeInfo
- x_CreateBlastQueries()
: CMultiAligner
- x_CreateBlobInCache()
: CNCBlobStorage
- x_CreateButton()
: CDockPanel
- x_CreateColorTable()
: CColorTableMethod
- x_CreateContainerWindow()
: CDockContainer
- x_CreateContentXForm()
: CPageHandler
- x_CreateContextMenuBackbone()
: CProjectView
- x_CreateControls()
: CDockPanel, CDockContainer, CGlWidgetBase, CCrossAlnWidget
- x_CreateDataSource()
: CHitMatrixDSBuilder
- x_CreateDB()
: CBDB_RawFile
- x_CreateDefaultViews()
: CFrameworkDemoGUI
- x_CreateDenseg()
: CAlnMixMerger
- x_CreateDesc()
: CPhrapReader, CPhrap_Contig, CPhrap_Read
- x_CreateDisplayStyle()
: CAlnMultiModel
- x_CreateDocuments()
: CProjectService
- x_CreateDriver()
: CGBDataLoader
- x_CreateEditJob()
: CAutodefToolManager
- x_CreateEventHandler()
: CProjectView
- x_CreateExtensionPoint()
: CExtensionRegistry
- x_CreateFeat()
: CPhrap_Contig, CPhrap_Read
- x_CreateFeatHist()
: CSGFeatureJob
- x_CreateFeature()
: CDataMiningPanel
- x_CreateFeature1()
: CSGFeatureJob
- x_CreateFeature2()
: CGeneModelFeatJob, CSGFeatureJob
- x_CreateFeatures()
: CSGFeatureJob
- x_CreateFileArtProvider()
: CWorkbench
- x_CreateFlagBoxes()
: CMergeAlignmentsParamsPanel
- x_CreateFlatFileGenerator()
: CAsn2FlatApp, CAsn2FastaApp
- x_CreateFloatingToolBars()
: CGBenchGUI, CFrameworkDemoGUI
- x_CreateFonts()
: CPhyloTreeLabel
- x_CreateFrameAndContainer()
: CDockManager
- x_CreateGaugeIfNeeded()
: CMessageSlot
- x_CreateGeneFeatures()
: CGFFReader
- x_CreateGeneModels()
: CGeneModelFeatJob
- x_CreateGraph()
: CPhrap_Contig, CFeatureLoadingJob
- x_CreateGUI()
: CDemoApp, CDemoAlignScorePropsApp, CDemoApp, CDemoTableCtrlApp, CTestTreeApp, CSeqTextDemoApp, CSeqGraphicDemoApp, CDemoApp, CPhyloTreeDemoApp, CDemoFeatTableApp, CHitMatrixDemoApp, CDemoApp, CDemoThemeDlgApp, CDemoAlignTableApp, CAlignMultipleDemoApp, CCrossAlnDemoApp, CFrameworkDemoApp, CGBenchFeedbackAgent, CGBenchApp, CwxNCBIApp
- x_CreateHandles()
: CSparseMultiDataSource, CAlnVecMultiDataSource
- x_CreateHeaderFooter()
: CPageHandler
- x_CreateHistogram()
: CHitMatrixRenderer
- x_CreateHit()
: CHitMatrixDataSource
- x_CreateHit_Denseg()
: CHitMatrixDataSource
- x_CreateHit_Std()
: CHitMatrixDataSource
- x_CreateHits()
: CHitMatrixDataSource
- x_CreateHits_Diagonal()
: CHitMatrixDataSource
- x_CreateIds()
: CHitMatrixDataSource
- x_CreateIndex()
: CElementaryMatching
- x_CreateInfoItemIfNeeded()
: CTypeInfo
- x_CreateItems()
: CBLAST_DB_Dialog, CProjectServiceTestJob
- x_CreateIterator()
: CSeqVector
- x_CreateJob()
: CSequenceSearchTool, COrfSearchTool, CFeatureSearchTool, CEntrezSearchTool, CCpgSearchTool, CComponentSearchTool, CNetBLAST_DMSearchTool, CSearchToolBase
- x_CreateLayout()
: CPhyloTreeCGIApplication, CGuideTree, CLDBlockTrack, CHapmapTrack, CGapTrack, CBinsTrack
- x_CreateLevelTrack()
: CFeaturePanel
- x_CreateLitRequest()
: CEUtilsApp
- x_CreateLoadingJob()
: CCreateNeedlemanWunschToolManager, CAutodefToolManager, CWindowMaskerTool, CCleanupTool, CTreeBuilderTool, CSplignTool, CMergeAlignmentsToolManager, CGroupAlignmentsToolManager, CFindOverlapTool, CCreateGeneModelToolManager, CCleanupAlignmentsToolManager, CAlgoToolManagerBase
- x_CreateLog()
: CNetScheduleServer
- x_CreateMainFrame()
: CWorkbench
- x_CreateMapRanges()
: CFeatureGraph
- x_CreateMatcher()
: CDiagSyntaxParser
- x_CreateMenuBarMenu()
: CSnpTableView, CFeatTableView, CPhyTreeView, CMultiAlignView, CMPCrossAlignView, CDotMatrixView, CCrossAlignView, CAnnotCompareView, CAlignSpanView, CProjectViewBase
- x_CreateMergedChain()
: CNCMMReserve
- x_CreateMessageSlotPanel()
: CMessageSlotPopupWindow
- x_CreateModel()
: CAlnMultiWidget
- x_CreateNavigationToolbar()
: CProjectViewToolBatFactory
- x_CreateNCClient()
: CRemoteAppDispatcher
- x_CreateNewChain()
: CNCMMReserve
- x_CreateNewClient()
: CNetScheduleControl
- x_CreateNewDBPart()
: CNCBlobStorage
- x_CreateNewDBStructure()
: CNCBlobStorage
- x_CreateNextItem()
: CwxMainFrame
- x_CreateNSClient()
: CRemoteAppDispatcher
- x_CreateOneProject()
: CDataLoadingAppJob
- x_CreateOptionsHandle()
: CTblastxAppArgs, CTblastnAppArgs, CRPSTBlastnAppArgs, CRPSBlastAppArgs, CPsiBlastAppArgs, CBlastxAppArgs, CBlastpAppArgs, CBlastnAppArgs, CBlastAppArgs
- x_CreateOptionsPanelIfNeeded()
: CBLASTToolManagerBase
- x_CreateOusputSeqaligns()
: CSeqAlignFilter
- x_CreateOverflowReader()
: CBDB_Cache
- x_CreatePage()
: CPageHandler
- x_CreatePageClipObject()
: CPageHandler
- x_CreatePageXForm()
: CPageHandler
- x_CreatePane()
: CGlWidgetDemo, CSeqTextWidget, CSeqGraphicWidget, CPhyloTreeWidget, CHitMatrixWidget, CGlWidgetBase, CAlnMultiWidget, CCrossAlnWidget
- x_CreateParamsPanelIfNeeded()
: CCreateNeedlemanWunschToolManager, CAutodefToolManager, CWindowMaskerTool, CCleanupTool, CTreeBuilderTool, CSplignTool, CMergeAlignmentsToolManager, CGroupAlignmentsToolManager, CFindOverlapTool, CCreateGeneModelToolManager, CCleanupAlignmentsToolManager, CBLASTToolManagerBase, CAlgoToolManagerBase
- x_CreatePatternQueries()
: CMultiAligner
- x_CreatePopupMenu()
: CSeqGraphicWidget, CAlnMultiWidget
- x_CreatePrintersMarks()
: CPageHandler
- x_CreateProjectItemFromBlastResult()
: CNetBlastLoadingJob
- x_CreateProjectItemItem()
: CAppExplorerService
- x_CreateProjectItems()
: CGwasLoadJob, CWindowMaskerJob, CCleanupJob, CTreeBuilderJob, CSplignJob, CFindOverlapJob, CCreateNeedlemanWunschJob, CWigLoadJob, CGenBankLoadingJob, CFastaLoadJob, CBedLoadJob, CAgpLoadJob, CPhyLoadJob, CMergeAlignmentsJob, CGroupAlignmentsJob, CCreateGeneModelJob, CCleanupAlignmentsJob, CBLASTSeqToolJob, CNetBlastLoadingJob, CDataLoadingAppJob, CGBankLoadingJob, CAsnLoadJob
- x_CreateProjectPanelIfNeeded()
: CAutodefToolManager, CBLASTToolManagerBase, CAlgoToolManagerBase
- x_CreateProjectViewTreeItem()
: CAppExplorerService
- x_CreatePssmFromFreqRatios()
: CPssmEngine
- x_CreatePssmFromMsa()
: CPssmEngine
- x_CreatePssmScoresFromFrequencyRatios()
: CPsiBlastImpl
- x_CreateReader()
: CGBDataLoader
- x_CreateReaders()
: CGBDataLoader
- x_CreateReadGroup()
: CQueue
- x_CreateRemapData()
: CElementaryMatching
- x_CreateRemoteBlastIfNeeded()
: CNetBlastJobDescriptor
- x_CreateRow()
: CAlnMultiModel
- x_CreateScope()
: CEditBioseqSampleApp
- x_CreateScoreTable()
: CMatrixScoringMethod, CColumnScoringMethod
- x_CreateScoringMethodsMenu()
: CAlnMultiWidget
- x_CreateSelectionToolbar()
: CProjectViewToolBatFactory
- x_CreateSeparateProjects()
: CDataLoadingAppJob
- x_CreateSeq_align()
: CPhrap_Contig
- x_CreateSeq_feat()
: SSNP_Info
- x_CreateSeqAnnots()
: CAnalysisFileLoader
- x_CreateSeqFtable()
: CAnalysisFileLoader
- x_CreateSeqGraph()
: CAnalysisFileLoader
- x_CreateSeqRequest()
: CEUtilsApp
- x_CreateSparseDataSource()
: CAlnMultiDSBuilder
- x_CreateSSeqLoc()
: CBlastSampleApplication
- x_CreateStateChange()
: CObservable, CSelectionService, CProjectService
- x_CreateStorage()
: CNSInfoCollector
- x_CreateStorages()
: CNetCacheServer
- x_CreateStream()
: CNSJobInfo
- x_CreateString()
: CSnpBitfield2, CSnpBitfield1_2, CSnpBitfield
- x_CreateSubjectBioseq()
: CBlastFormat
- x_CreateSubsetAlign()
: CGuideTreeCalc
- x_CreateTaxRequest()
: CEUtilsApp
- x_CreateToolItems()
: CRunToolDlg
- x_CreateTreeItems()
: CBLAST_DB_Dialog
- x_CreateUID()
: CDiagContext
- x_CreateUniqueStr()
: CReferenceItem
- x_CreateValidAlign()
: CGuideTreeCalc
- x_CreateViewToolBar()
: CGBenchGUI, CFrameworkDemoGUI
- x_CreateWDir()
: IRemoteAppRequest_Impl
- x_CreateWidgets()
: CFeatureSearchForm, CComponentSearchForm
- x_CreateWindow()
: CSplineDemoUI, CGl3dDemoUI, CFontDemoUI, CAnnotCompareFilterDlg, CRenameDlg, CTrackCreatorUI, CSnpFilterUI, CSnpFilterListDialog, CSeqTextDlg, CSeqMarkerSetDlg, CHairlineOptionsDlg, CAnnotConfigDlg, CFeatureTypesDlg, CPhyloTreeFilterDlg, CFilterDialog, CSpanTableSettingsDialog
- x_CreateWriter()
: CGBDataLoader
- x_CreateWriters()
: CGBDataLoader
- x_CutOrCopy()
: CProjectTreePanel, CAppExplorerCmdHandler
- x_DB_CPut()
: CBDB_RawFile
- x_DB_Fetch()
: CBDB_RawFile
- x_DB_Put()
: CBDB_RawFile
- x_DBC_Fetch()
: CBDB_RawFile
- x_DbCleanup()
: CCleanup_imp
- x_DbToIndexName()
: CSeqDBAliasSets
- x_DDX_Context()
: CSeqLocFormBase
- x_Deallocate()
: CSimpleBufferT< T, ResizeStrategy >
- x_DeallocateBlock()
: CNCMMSizePool
- x_DebugValid()
: CSelectionControl
- x_DeclareDead()
: CEventHandler
- x_Decode()
: CAnyContentObject
- x_DecodeGeneticCode()
: COrfSearchJob
- x_DecompressBuffer()
: CNlmZipReader
- x_DecompressFile()
: CCompression
- x_DecorateProjectItem()
: CAppExplorerService
- x_DecSeg()
: CSeqVector_CI
- x_DeduceTarget()
: CAsn2FlatApp, CAsn2FastaApp
- x_DefaultByteLimit()
: CWriteDB_File
- x_DefaultScheme()
: CPhyloTreeScheme
- x_DefaultTimeout()
: CRemoteBlast
- x_DeflineSeqIdWrite()
: CDeflineProcess
- x_DeleteAllFilenames()
: CMultiFileInput
- x_DeleteAllItems()
: CSelectionControl
- x_DeleteAllJobs()
: CAnnotCompareDS
- x_DeleteAllLevels()
: CTableSortMultiChoice
- x_DeleteBlobFromCache()
: CNCBlobStorage
- x_DeleteDBPart()
: CNCBlobStorage
- x_DeleteFieldToShow()
: CBlastTabularInfo
- x_DeleteFilename()
: CMultiFileInput
- x_DeleteItem()
: CSelectionControl
- x_DeleteItems()
: CProjectServiceTestJob
- x_DeleteJob()
: CScoreCache, CSparseMultiDataSource, CAlnVecMultiDataSource
- x_DeleteLevel()
: CTableSortMultiChoice
- x_DeleteRow()
: CColorPanel, CLocationListCtrl
- x_DeleteScoringJob()
: CSGAlignmentDS
- x_DeleteSite()
: CGuiRegistry
- x_DeleteTlsData()
: CTlsBase
- x_DelimitedRead()
: CCgiEntryReaderContext
- x_DensegLength()
: CContigAssembly
- x_Deprecated()
: CSplitter
- x_DeregisterIcon()
: CLayoutTrack
- x_DescComments()
: CFlatGatherer
- x_DescentToChilds()
: CPhyloTreeDataSource
- x_DescribeClones()
: CDeflineGenerator
- x_Deserialize()
: CBlastTabular
- x_DeserializeBitVector()
: CNetScheduleHandler
- x_Destroy()
: CWGLDemoApp, CTrackingEnvHolder, CTlsBase
- x_DestroyCache()
: CSeqVector_CI
- x_DestroyEmptyLayout()
: CDockContainer
- x_DestroyFonts()
: CPhyloTreeLabel
- x_DestroyFrameAndContainer()
: CDockManager
- x_DestroyGauge()
: CMessageSlot
- x_DestroyGraphs()
: CHitMatrixRenderer
- x_DestroyGUI()
: CFrameworkDemoApp, CGBenchApp, CwxNCBIApp
- x_DestroyMainFrame()
: CWorkbench
- x_DestroyNode()
: CDockContainer
- x_Detach()
: CBioseq_set_EditHandle, CBioseq_EditHandle
- x_DetachAllViews()
: CGBDocument
- x_DetachAnnot()
: CBioseq_Base_Info
- x_DetachContents()
: CSeq_entry_Info
- x_DetachDS()
: CTSE_ScopeInfo
- x_DetachEntry()
: CBioseq_set_Info
- x_DetachFromFiles()
: CBDB_Transaction
- x_DetachFromOM()
: CScope_Impl
- x_DetachFromPool()
: CThreadPool_Controller
- x_DetachFromProject()
: CProjectViewBase
- x_DetachObject()
: CTSE_Info_Object
- x_DetachProjectItem()
: CProjectPrx
- x_DetachProjectItems()
: CProjectPrx
- x_DetachTSE()
: CScopeInfo_Base, CBioseq_ScopeInfo
- x_DetachView()
: CGBDocument
- x_DetectFormatVersion()
: CPhrapReader
- x_Diff()
: CDiagRangeCollection
- x_DiffChar()
: CSeqDBIsam
- x_DiffCharLease()
: CSeqDBIsam
- x_DiffSample()
: CSeqDBIsam
- x_DiffSecond()
: CDiagRangeCollection
- x_DimDisplay()
: CSeqGraphicRenderer
- x_DirExists()
: CMsvcSite
- x_DirtyAnnotIndex()
: CTSE_Info_Object
- x_DisableAnnotIndexWhenLoaded()
: CTSE_Chunk_Info
- x_Disconnect()
: CRPCClient< TRequest, TReply >, CMLAClient_Base, CID1Client_Base
- x_DisconnectAtSlot()
: CReader, CId2Reader, CId1Reader, CCacheReader
- x_DisconnectDocument()
: CProjectService
- x_DisconnectNodes()
: CDockLayoutTree
- x_DispatchEventToHandler()
: CGlWidgetPane
- x_DisplayAlnvec()
: CDisplaySeqalign
- x_DisplayAlnvecInfo()
: CDisplaySeqalign
- x_DisplayDefline()
: CShowBlastDefline
- x_DisplayDeflines()
: CBlastFormat
- x_DisplayDeflineTable()
: CShowBlastDefline
- x_DisplayMaster()
: CAlnGraphic
- x_DistributeEvenly()
: CSplitter
- x_Divide()
: CRegexpUtil
- x_DoAddToWorkbench()
: CViewManagerService
- x_DoAlloc()
: CNCMMCentral
- x_DoBackgroundWork()
: CNCBlobStorage, CNCMMCentral, CNCFileSystem
- x_DoBackTrace()
: CSplicedAligner32, CSplicedAligner16, CBandAligner, CNWAligner
- x_DoCallMmap()
: CNCMMCentral
- x_DoChooseNewWorkspaceName()
: CProjectTask
- x_DockPanelForClient()
: CDockContainer
- x_DocLayout()
: CPdf
- x_DoCloseFile()
: CNCFileSystem
- x_DoCloseWorkspace()
: CProjectTask
- x_DoCmd_Alive()
: CNCMessageHandler
- x_DoCmd_Get()
: CNCMessageHandler
- x_DoCmd_GetConfig()
: CNCMessageHandler
- x_DoCmd_GetOwner()
: CNCMessageHandler
- x_DoCmd_GetServerStats()
: CNCMessageHandler
- x_DoCmd_GetSize()
: CNCMessageHandler
- x_DoCmd_HasBlob()
: CNCMessageHandler
- x_DoCmd_Health()
: CNCMessageHandler
- x_DoCmd_IC_GetAccessTime()
: CNCMessageHandler
- x_DoCmd_IC_GetBlobsTTL()
: CNCMessageHandler
- x_DoCmd_IC_GetSize()
: CNCMessageHandler
- x_DoCmd_IC_IsOpen()
: CNCMessageHandler
- x_DoCmd_IC_Store()
: CNCMessageHandler
- x_DoCmd_IC_StoreBlob()
: CNCMessageHandler
- x_DoCmd_IsLock()
: CNCMessageHandler
- x_DoCmd_Monitor()
: CNCMessageHandler
- x_DoCmd_NotImplemented()
: CNCMessageHandler
- x_DoCmd_OK()
: CNCMessageHandler
- x_DoCmd_Put2()
: CNCMessageHandler
- x_DoCmd_Put3()
: CNCMessageHandler
- x_DoCmd_Remove()
: CNCMessageHandler
- x_DoCmd_Remove2()
: CNCMessageHandler
- x_DoCmd_Shutdown()
: CNCMessageHandler
- x_DoCmd_Version()
: CNCMessageHandler
- x_DoCommand()
: CNCMessageHandler
- x_DoConversion()
: COpenViewManager
- x_DoDeepCopy()
: CBlastOptionsLocal, CBlastOptionsRemote, CBlastOptions
- x_DoDefaultActionOnSelected()
: CMapControl
- x_DoDestroy()
: CBlastRPSAuxInfo
- x_DoDialogShowSpecial()
: CSnpTableView
- x_DoDistributeEvenly()
: CSplitter
- x_DoDragSeparator()
: CSplitter
- x_DoEnsureProjectSaved()
: CProjectTask
- x_DoFills()
: CDisplaySeqalign
- x_DoFinish()
: CScopeTransaction_Impl
- x_DoLensZoom()
: CSeqGraphicRenderer
- x_DoMoveColumn()
: CAlnMultiHeaderHandler
- x_DoMultiple()
: CAppHitFilter
- x_DoMultipleSections()
: CFlatGatherer
- x_DoOpenWorkspace()
: CProjectTask
- x_DoPairwise()
: CAppHitFilter
- x_DoPromoteCdregion()
: CPromote
- x_DoPromotePub()
: CPromote
- x_DoPromoteRna()
: CPromote
- x_DoRemoveViewFromWorkbench()
: CViewManagerService
- x_DoResize()
: CSplitter
- x_DoSaveProjectAs()
: CProjectTask
- x_DoSaveUserSelected()
: CProjectTask
- x_DoSaveWorkspaceOnly()
: CProjectTask
- x_DoSearch()
: CSequenceSearchJob, COrfSearchJob, CFeatureSearchJob, CEntrezSearchJob, CCpgSearchJob, CComponentSearchJob, CNetBLAST_DMSearchJob, CFeatureSearchJob, CSearchJobBase
- x_DoSelection()
: CSelectionVisitor
- x_DoSingleSection()
: CGFFGatherer, CGenbankGatherer, CFlatGatherer, CFtableGatherer, CFeatureGatherer, CEmblGatherer
- x_DoSubmatrix()
: CMMAligner
- x_DoTransition()
: CRunToolDlg, COpenViewDlg, COpenDlg
- x_DoubleLock()
: CSyncQueue< Type, Container >
- x_DoUpdate()
: CTSE_Info_Object, CTSE_Info, CSeq_annot_SNP_Info, CSeq_entry_Info, CSeq_annot_Info, CBioseq_set_Info, CBioseq_Info, CBioseq_Base_Info
- x_DoUpdateRowLines()
: CAlnMultiModel
- x_DoUpdateRowPositions()
: CAlnMultiModel
- x_DoUpdateRowsOrder()
: CAlnMultiModel
- x_DoUpdateSeq_inst()
: CSeqMap
- x_DoWithExternalHits()
: CCompartApp
- x_DoWriteToFile()
: CNCFileSystem
- x_Draw()
: CDummyGlyph, CVisRangeGlyph, CTranslationGlyph, CSwitchPointGlyph, CSeqGraphicRenderer, CSegmentGlyph, CSeqGlyph, CMatePairGlyph, CLayoutTrack, CLayoutGroup, CHistogramGlyph, CRnaCdsGroup, CGeneGroup, CFeaturePanel, CFeatGlyph, CCommentGlyph, CClonePlacementGlyph, CCdsGlyph, CAlignSmearGlyph, CAlignGlyph, CLDBlockGlyph, CGwasGlyph, CBinsGlyph
- x_DrawBackground()
: CMapItem, CGroupMapWidget::CGroupItem
- x_DrawBorder()
: CAlignGlyph
- x_DrawBoundary()
: CLayoutGroup
- x_DrawButton()
: CDockMarkerWindow
- x_DrawCheckbox()
: CSurveyBrowser
- x_DrawClientElements()
: CDockPanel
- x_DrawColorLegendBackGround()
: CLegendHandler
- x_DrawCorner()
: CPhyloRectCladogram
- x_DrawCornerCropMarks()
: CPageHandler
- x_DrawCrossAlignment()
: CCrossPanelIR
- x_DrawCrossedPanel()
: CCrossPanelIR
- x_DrawFeatureBar()
: CRnaCdsGroup, CFeatGlyph
- x_DrawFocusRect()
: CMapItem
- x_DrawHairLine()
: CFeaturePanel
- x_DrawHorzLabels()
: CAxisRenderer
- x_DrawIntervalBreaks()
: CSequenceTextGraph
- x_DrawItem()
: CMinPanelContainer
- x_DrawItemsRange()
: CMapControl
- x_DrawLabel()
: CFeatGlyph, CLDBlockLine
- x_DrawLabels()
: CRnaCdsGroup
- x_DrawMarker()
: CSeqMarkHandler, CMouseZoomHandler, CBookmarksHandler
- x_DrawMultiAlign()
: CAlignGlyph
- x_DrawNumber()
: CGradientPanel
- x_DrawPanelLink()
: CPageHandler
- x_DrawPWAlign()
: CAlignGlyph
- x_DrawPWAlignElemSequence()
: CAlignGlyph
- x_DrawRecursive()
: CGlTube< Curve >, CGlCurve< Curve >
- x_DrawRuler()
: CFeatGlyph
- x_DrawSelectionArea()
: CSelectionHelper
- x_DrawSeparationLines()
: CMapControl
- x_DrawSeparator()
: CSplitter, CMapItem, CDockSplitter
- x_DrawSequence()
: CTranslationGlyph, CCrossPanelIR
- x_DrawText()
: CMapItem
- x_DrawTicks()
: CMouseZoomHandler
- x_DrawTree()
: CPhyloSlantedCladogram, CPhyloRectCladogram, CPhyloRadial, CPhyloForce
- x_DrawTriangle()
: CPageHandler
- x_DrawVariations()
: CSequenceTextGraph
- x_Drop()
: CTSE_Lock
- x_drop_final
: AllCutoffScores
- x_drop_gap
: BlastRawCutoffs
- x_drop_gap_final
: BlastRawCutoffs
- x_drop_gapped
: AllCutoffScores
- x_drop_ungapped
: AllCutoffScores, BlastRawCutoffs
- x_DropAnnotObjects()
: CTSE_Chunk_Info, CSeq_annot_SNP_Info, CSeq_annot_Info
- x_DropBlob()
: CBDB_Cache
- x_DropBuffer()
: CPushback_Streambuf
- x_DropIllegalQuals()
: CFeatureItem
- x_dropoff
: BlastUngappedCutoffs, BlastInitialWordOptions, BlastCompo_GappingParams
- x_dropoff_init
: BlastUngappedCutoffs
- x_dropoff_max
: BlastInitialWordParameters
- x_DropOverflow()
: CBDB_Cache
- x_DropTSE()
: CDataSource
- x_DSAttach()
: CTSE_Split_Info, CTSE_Info_Object
- x_DSAttachContents()
: CTSE_Info_Object, CTSE_Info, CSeq_entry_Info, CSeq_annot_Info, CBioseq_set_Info, CBioseq_Info, CBioseq_Base_Info
- x_DSDetach()
: CTSE_Info_Object
- x_DSDetachContents()
: CTSE_Info_Object, CTSE_Info, CSeq_entry_Info, CSeq_annot_Info, CBioseq_set_Info, CBioseq_Info, CBioseq_Base_Info
- x_DSMapObject()
: CTSE_Info, CSeq_entry_Info, CSeq_annot_Info, CBioseq_set_Info, CBioseq_Info
- x_DSUnmapObject()
: CTSE_Info, CSeq_entry_Info, CSeq_annot_Info, CBioseq_set_Info, CBioseq_Info
- x_DumpBlob()
: CGridDebugContext
- x_DumpFields()
: CBDB_FileDumper
- x_DumpOutput()
: CAppHitFilter
- x_DumpPkgInfo()
: CAppPackagesDlg
- x_DumpRegSettings()
: CGBenchApp
- x_DumpRequest()
: CEUtilsApp
- x_DupFeatSeverity()
: CValidError_bioseq
- x_DupLocal()
: CBuildDatabase
- x_EditAndAddBioseq()
: CBuildDatabase
- x_EditHeaders()
: CBuildDatabase
- x_Empty()
: CTrackContainer, CSequenceTrack, CLayoutTrack, CGlyphContainer, CFeaturePanel, CCompoundRWRegistry, CTwoLayerRegistry, CCompoundRegistry, CMemoryRegistry, IRegistry, CEnvironmentRegistry
- x_EnableAddRename()
: CSnpFilterUI
- x_EnableAllTests()
: CNcbiTestApplication
- x_EnableAnnotIndex()
: CTSE_Chunk_Info
- x_EnableCopyDelete()
: CSnpFilterUI
- x_EnabledEditOK()
: CTrackCreatorUI
- x_EnableIcon()
: CLayoutTrack
- x_EnableSave()
: CSnpFilterUI
- x_Encoding_CSeq_data2CSeqUtil()
: CBlastSeqVectorFromCSeq_data
- x_End()
: CSyncQueue< Type, Container >
- x_EndDrag()
: CSplitter
- x_EndMess()
: CNcbiDiag
- x_EndModal()
: CRunToolDlg
- x_EndNamespace()
: CObjectOStreamXml
- x_EndOfPacket()
: CId2ReaderBase
- x_EndOfWhat()
: CDB_Exception
- x_EndRead()
: CBDB_File
- x_EndsWithStrain()
: CDeflineGenerator
- x_EndTypeNamespace()
: CObjectOStreamXml, CObjectIStreamXml
- x_EndWriteGBSet()
: CGBSeqFormatter
- x_EnsureAllDeps()
: CNcbiTestApplication
- x_EnsureBlobInfoRead()
: CNCBlobLockHolder
- x_EnsureChildOrder()
: CNcbiTestTreeElement
- x_EnsurePos()
: CFastaAlignmentBuilder
- x_Enumerate()
: CCompoundRWRegistry, CTwoLayerRegistry, CCompoundRegistry, CMemoryRegistry, IRegistry, CEnvironmentRegistry
- x_Equals()
: CSeq_id_Textseq_Tree, CRangeCollection< Position >, CAlignRangeCollection< TAlnRange >, CSparse_CI, CAlnVecIterator, CSparseIterator, CAlnVecIterator, CTempString
- x_Erase()
: CSeq_id_Textseq_Tree, CSyncQueue< Type, Container >
- x_EraseElement()
: CCache< TKey, TValue, THandler, TLock, TSize >
- x_EraseItem()
: CSelListModelImpl< Item >
- x_EraseLast()
: CCache< TKey, TValue, THandler, TLock, TSize >
- x_EraseMarkedItems()
: CSelListModelImpl< Item >, CAlnMultiModel
- x_Err
: CRWStreambuf
- x_Error()
: CWig2tableApplication, CGFFReader, CGff3Reader
- x_ErrorCodeToString()
: CPssmCreateTestFixture, CPssmEngine
- x_ErrPos
: CRWStreambuf
- x_EstimateMismatchCount()
: oligofar::CBatch
- x_EvalBoolean()
: CEntrez2ClientApp
- x_EvalExons()
: CCompartApp::CCompartment
- x_EvalFirst()
: CStringUTF8
- x_EvalNext()
: CStringUTF8
- x_EvaluateMinKey()
: CMergeVolumes
- x_ExceptionIsLegalForFeature()
: CFeatureItem
- x_Execute()
: CSFTranslationJob, CEpigenomicsJob, CLDBlockJob, CHapmapJob, CGapJob, CBinsJob, CSGCalcFeatHistJob, CSGFeatureJob, CSGSeqGraphJob, CSGSwitchPointJob, CSGSegmentsSeqIDJob, CSGSegmentMapJob, CSeqGraphicJob, CSGAlignScoringJob, CSGAlignmentJob, CSnpJob
- x_ExecuteNextTaskInQueue()
: CAppTaskService
- x_ExecuteReadyTasks_OnThread()
: CSchedulerEngine
- x_ExecuteSearch()
: CDataMiningPanel
- x_ExecuteSql()
: CSQLITE_Connection
- x_Exists()
: CMRUCache
- x_Exon2DS()
: CSplignFormatter
- x_Exp10()
: CGlDrawScale
- x_Expand()
: CLayoutTrack, CFeaturePanel, CDataTrack
- x_ExpandAliases()
: CSeqDBAliasNode
- x_ExpandCombinedQuals()
: CCleanup_imp
- x_ExpandHspRange()
: CSubjectRangesSet
- x_ExpandPattern()
: CSeqSearch
- x_ExpandRecursion()
: CFindRSites
- x_ExpandStackTrace()
: CStackTrace
- x_Extend()
: CMemoryFileMap
- x_ExtendDSWithWidths()
: CAlnMix
- x_ExtendedCleanupBioSource()
: CCleanup_imp
- x_ExtendedCleanupBioSourceDescriptorsAndFeatures()
: CCleanup_imp
- x_ExtendedCleanupBioSourceFeatures()
: CCleanup_imp
- x_ExtendedCleanupMolInfoDescriptors()
: CCleanup_imp
- x_ExtendedCleanupPubs()
: CCleanup_imp
- x_ExtendHit()
: CElementaryMatching, CCpGIslands
- x_ExtendSingleGeneOnmRNA()
: CCleanup_imp
- x_ExtendSubpath()
: CMMAligner
- x_ExtendToQueryEnd()
: oligofar::TAligner_SW< CQuery, CSubject >
- x_ExtractAlignmentData()
: CPsiBlastInputData, CPsiBlastInputClustalW
- x_ExtractAllData()
: CSeqDBIsam
- x_ExtractCScopesAndMasks()
: CQuerySplitter
- x_ExtractData()
: CSeqDBIsam
- x_ExtractDeflines()
: CWriteDB_Impl
- x_ExtractEntry()
: CTar
- x_ExtractNucProtDescriptors()
: CCleanup_imp
- x_ExtractPageData()
: CSeqDBIsam
- x_ExtractQueries()
: CBlastFormatterApp
- x_ExtractQueryForPssm()
: CPsiBlastInputData, CPsiBlastInputClustalW
- x_ExtractQueryFromMsa()
: CPsiBlastInputClustalW
- x_ExtractQueryFromPssm()
: CPsiBlastImpl
- x_ExtractQueryIds()
: CRemoteBlast
- x_ExtractSuffixFromInitials()
: CCleanup_imp
- x_ExtractUserSpecifiedMasks()
: CRemoteBlast
- x_FailJob()
: CGridWorkerNode
- x_FailJobs()
: CQueue
- x_FastaSeqIdWrite()
: CTitleProcess
- x_FastaToSeqLoc()
: CBlastFastaInputSource
- x_FaultcodeEnumToCode()
: CSoapFault
- x_FaultMustUnderstand()
: CSoapServerApplication
- x_FaultNoListeners()
: CSoapServerApplication
- x_FaultServer()
: CSoapServerApplication
- x_FaultVersionMismatch()
: CSoapServerApplication
- x_FeatComments()
: CFlatGatherer
- x_FeatureID()
: CGFFReader
- x_Fetch()
: CBDB_File
- x_FetchAll()
: CSnpTableJob
- x_FetchBlobAttributes()
: CBDB_Cache
- x_FetchBufferDecompress()
: CBDB_RawFile
- x_FetchData()
: CRemoteBlastDbAdapter
- x_FetchFirst_Prolog()
: CBDB_FileCursor
- x_FetchFtable()
: CSnpJob
- x_FetchGraphs()
: CSnpJob
- x_FetchIdLine()
: oligofar::CFastqFileReader
- x_FetchOnlySpecial()
: CSnpTableJob
- x_FetchReadData()
: oligofar::CFastqFileReader
- x_FileMRUList()
: CProjectLoadOptionPanel
- x_Fill()
: CSimpleBufferT< T, ResizeStrategy >
- x_FillBlobIdsFromCache()
: CNCBlobStorage
- x_FillBlock()
: CAsnRetrieveJob
- x_FillBuffer()
: CPushback_Streambuf, CCgiEntryReader
- x_FillCache()
: CSeqVector_CI
- x_FillCacheFromDBPart()
: CNCBlobStorage
- x_FillCacheFromDBVolume()
: CNCBlobStorage
- x_FillClass()
: CAsnRetrieveJob
- x_FillContainer()
: CAsnRetrieveJob
- x_FillDeflineAndId()
: CShowBlastDefline
- x_FillDescrAnnot()
: CLDS_Query
- x_FillDescrObj()
: CLDS_Query
- x_FillIdentityInfo()
: CDisplaySeqalign
- x_FillInserts()
: CDisplaySeqalign
- x_FillKnownStrands()
: CSeq_align_Mapper_Base
- x_FillList()
: CLocationPanel, CwxHistogramDlg
- x_FillLocList()
: CDisplaySeqalign
- x_FillNodeMapData()
: CGuideTreeCGIMap
- x_FillObjects()
: CObjectListWidgetSel
- x_FillProjectsList()
: CProjectSelectorPanel
- x_FillRecord()
: CQueue
- x_FillScoreMatrix()
: CCmdLineBlastXMLReportData
- x_FillSeqBuffer()
: CSeqDBImpl
- x_FillSeqData()
: CPhrap_Seq
- x_FillSeqid()
: CDisplaySeqalign
- x_FilterHasId()
: CSeqDBVol
- x_FilterItems()
: CBLAST_DB_Dialog, CItemSelectionPanel
- x_FilterSelected()
: CSnpFilterListDialog
- x_Finalize()
: CSQLITE_Statement
- x_FinalizeAlignedCompartment()
: CSplign
- x_FinalizeSetupDiag()
: CDiagContext
- x_Find()
: CRangeCollection< Position >, CLocalHookSetBase, CSeq_annot_Finder, CThreadPoolEngine, CSchedulerEngine, CAttrRangeCollection< Attr, Position >, CArgDescriptions, CArgs, CCgiArgs
- x_FindAlignmentSubsets()
: CMultiAligner
- x_FindAndCombine()
: CMaskedRangeSet
- x_FindAnnot()
: CwxAnnotConfigDlg, CAnnotConfigDlg
- x_FindBestJ()
: CMMAligner
- x_FindBestPath()
: CMultiAligner
- x_FindBestTSE()
: CDataSource_ScopeInfo, CDataSource
- x_FindBestTSEInIndex()
: CDataSource_ScopeInfo
- x_FindBioObject()
: CTSE_Info
- x_FindBioseq_Info()
: CScope_Impl, CDataSource
- x_FindBioseq_set_Info()
: CDataSource
- x_FindBioseqInfo()
: CTSE_ScopeInfo, CScope_Impl
- x_FindBlastDBPath()
: CSeqDBAliasSets
- x_FindByFingerprint()
: CDockLayoutTree
- x_FindChunk()
: CTSE_Split_Info
- x_FindClosestSeqPos()
: CAlnMap
- x_FindConservedColumns()
: CMultiAligner
- x_FindConsistentHitSubset()
: CMultiAligner
- x_FindConstraints()
: CMultiAligner
- x_FindDataSource()
: CObjectManager
- x_FindDbInfoFromAvailableDatabases()
: CBlastServices
- x_FindDesc()
: CBioseq_Base_Info
- x_FindDockDropTargetByPos()
: CDockContainer
- x_FindDomainHits()
: CMultiAligner
- x_FindFingerPrint64()
: CNWAligner
- x_FindFreeChain()
: CNCMMReserve
- x_FindInClusterConstraints()
: CMultiAligner
- x_FindIndexBounds()
: CSeqDBIsam
- x_FindInfo()
: CSeq_id_PDB_Tree, CSeq_id_Patent_Tree, CSeq_id_Giim_Tree, CSeq_id_General_Tree, CSeq_id_Local_Tree, CFeatTree
- x_FindInNegativeList()
: CSeqDBIsam
- x_FindItemByLabel()
: CItemSelectionPanel, CAppExplorerService
- x_FindItemByPanel()
: CMinPanelContainer
- x_FindItemByPos()
: CMinPanelContainer
- x_FindLargestEdge()
: CTree
- x_FindListeners()
: CSoapServerApplication
- x_FindListenersByName()
: CSoapServerApplication
- x_FindLocalHits()
: CMultiAligner
- x_FindLocalInClusterHits()
: CMultiAligner
- x_FindMatchByAcc()
: CSeq_id_Textseq_Tree
- x_FindMatchByName()
: CSeq_id_Textseq_Tree
- x_FindNextValidIdWithinRange()
: CMaskInfoRegistry
- x_FindNoncodingFeatureKeywordProduct()
: CAutoDefFeatureClause
- x_FindNuclLength()
: CWriteDB_Volume
- x_FindParent()
: CProjectFileWriter
- x_FindPatternHits()
: CMultiAligner
- x_FindQueryClusters()
: CMultiAligner
- x_FindQueryOccurrences()
: CPhiblastTestFixture
- x_FindRegion()
: CSeqDBAtlas
- x_FindRelationByName()
: CObjectConverter
- x_FindRPSHits()
: CMultiAligner
- x_FindRSite
: CFindRSites
- x_FindSampleToLeft()
: CTraceGraph
- x_FindSampleToRight()
: CTraceGraph
- x_FindSegment()
: CSeqMap, CDense_seg
- x_FindSeq()
: CPhrapReader
- x_FindSeq_annot_Info()
: CDataSource
- x_FindSeq_entry_Info()
: CDataSource
- x_FindSeq_feat()
: CTSE_Info
- x_FindSeq_id_Info()
: CScope_Impl
- x_FindSequenceFragments()
: CSeqTextPane
- x_FindStrInfo()
: CSeq_id_Textseq_Tree
- x_FindStrMatch()
: CSeq_id_Textseq_Tree
- x_FindSubItem()
: CMenuItem
- x_FindTSE_Info()
: CDataSource
- x_FindType()
: CSoapReadHook
- x_FindUsedGis()
: CTracebackSearchTestFixture
- x_FindVolName()
: CSeqDBVolSet
- x_Finish()
: CTrackCreatorUI, CAppJobTask, CProjectLoadOptionPanel
- x_FinishCommand()
: CNCMessageHandler
- x_FinishParsing()
: CSeq_annot_SNP_Info
- x_FinishReadingBlob()
: CNCMessageHandler
- x_FireCellUpdated()
: CwxAbstractTableModel
- x_FireDataChanged()
: CwxAbstractTableModel
- x_FireEvent()
: CProjectViewLinkManager
- x_FireRowsDeleted()
: CwxAbstractTableModel
- x_FireRowsInserted()
: CwxAbstractTableModel
- x_FireRowsUpdated()
: CwxAbstractTableModel
- x_FireStructureChanged()
: CwxAbstractTableModel
- x_FireTableChanged()
: CwxAbstractTableModel
- x_FireViewEvent()
: CGBDocument
- x_FirstDesc()
: CSeqdesc_CI
- x_FixCompression()
: CProcessor_ID2
- x_FixDataFormat()
: CProcessor_ID2
- x_FixEtAl()
: CCleanup_imp
- x_FixInitials()
: CCleanup_imp
- x_FixNucProtSources()
: CCleanup_imp
- x_FixPIDDbtag()
: CCleanup_imp
- x_FixProjectTitle()
: CProjectPrx
- x_FixProteinIDs()
: CCleanup_imp
- x_FixSegSetSource()
: CCleanup_imp
- x_FixSetSource()
: CCleanup_imp
- x_FixStrand()
: CBlastSeqVectorOM
- x_FixString()
: CSeqDBImpl
- x_FixSuffix()
: CCleanup_imp
- x_FlattenPubEquiv()
: CCleanup_imp
- x_Flush()
: CWriteDB_GiIndex, CWriteDB_IsamData, CWriteDB_IsamIndex, CWriteDB_GiMaskOffset, CWriteDB_GiMaskData, CWriteDB_SequenceFile, CWriteDB_HeaderFile, CWriteDB_IndexFile, CWriteDB_File, CWriteDB_ColumnIndex, CWriteDB_ColumnData, CDBAPI_CacheIWriter, CTar, CCgiEntryReader
- x_FlushAll()
: CSeqDBAtlas
- x_FlushComments()
: CFlatGatherer
- x_FlushCurChunk()
: CNCBlob
- x_FlushCurrentEntry()
: CCgiEntryReaderContext
- x_FlushNumericIndex()
: CWriteDB_IsamIndex
- x_FlushStateEventQueue()
: CAppJobDispatcher
- x_FlushStringIndex()
: CWriteDB_IsamIndex
- x_FlyCG_PtoR()
: CDeflineGenerator
- x_ForceComplete()
: CCgiEntry
- x_ForceSeqTypes()
: CSeq_loc_Mapper_Base
- x_ForceUnique()
: CCgiEntry
- x_ForEachProject()
: CWorkspaceFolderConstPrx
- x_ForEachProjectItem()
: CProjectFolderConstPrx
- x_ForegroundJob()
: CSGGenBankDS
- x_ForgetTSE()
: CScopeInfo_Base, CBioseq_ScopeInfo, CDataSource
- x_FormatAccession()
: CFlatItemFormatter
- x_FormatAlignment()
: CGFF3_Formatter
- x_FormatAttr()
: CGFFFormatter, CGFF3_Formatter
- x_FormatDBSourceID()
: CDBSourceItem
- x_FormatDenseg()
: CGFF3_Formatter
- x_FormatErrorMessage()
: CNetScheduleHandler
- x_FormatGBNoteQuals()
: CSourceFeatureItem
- x_FormatLabel()
: CAxisRenderer
- x_FormatLocation()
: CFtableFormatter
- x_FormatNoteQual()
: CSourceFeatureItem, CFeatureItem
- x_FormatNoteQuals()
: CSourceFeatureItem, CFeatureItem
- x_FormatOrganismLine()
: CGenbankFormatter
- x_FormatQual()
: CSourceFeatureItem, CFeatureItem
- x_FormatQuals()
: CSourceFeatureItem, CFeatureItem, CFeatureItemBase, CFtableFormatter
- x_FormatRefJournal()
: CFlatItemFormatter
- x_FormatRefLocation()
: CFlatItemFormatter
- x_FormatReply()
: CEntrez2ClientApp
- x_FormatSourceLine()
: CGenbankFormatter
- x_Found()
: CLocalHookSetBase, CSeqMap_CI
- x_FrameFromSeqLoc()
: CCleanup_imp
- x_Free()
: CWriteDB_IsamIndex, CSeqDBAtlas, CNcbiTable< TValue, TRow, TColumn >, CChecksum
- x_FreeAll_NoLock()
: CBucketPool< Value, Lock, RPool >
- x_FreeBlobIdLocks()
: CNCBlobStorage
- x_FreeBuffer()
: CScoringJob
- x_FreeHash()
: CNCMMDBPagesHash
- x_FreeItems()
: CTextViewRetrieveResult
- x_FromUserObject()
: CDockContainer, CBLASTParams
- x_Full_AddChildToContainer()
: CDockContainer
- x_Full_AddGrandChildrenAsSiblingsInContainer()
: CDockContainer
- x_Full_AddGrandChildrenToContainer()
: CDockContainer
- x_Full_AddSiblingInContainer()
: CDockContainer
- x_Full_CleanLayoutTree()
: CDockContainer
- x_Full_CleanLayoutTreeBranch()
: CDockContainer
- x_Full_DisconnectChildren()
: CDockContainer
- x_Full_ReduceContainer()
: CDockContainer
- x_Full_ReduceHiddenContainer_IfNeeded()
: CDockContainer
- x_Full_RemoveNode()
: CDockContainer
- x_Full_UnhideContainer_AddChildren()
: CDockContainer
- x_FuncCall()
: CAlignFilter
- x_FuseMolInfos()
: CCleanup_imp
- x_GarbageCollect()
: CSeqDBAtlas
- x_GatherAlignments()
: CFlatGatherer
- x_GatherBioseq()
: CFlatGatherer
- x_GatherCDSReferences()
: CFlatGatherer
- x_GatherCluster()
: CAlignedFeatureGraph
- x_GatherComments()
: CFlatGatherer
- x_GatherDescInfo()
: CCommentItem
- x_GatherFeatInfo()
: CCommentItem
- x_GatherFeatures()
: CFlatGatherer
- x_GatherFeaturesOnLocation()
: CFlatGatherer
- x_GatherIdentStats()
: CContigAssembly
- x_GatherInfo()
: CWGSItem, CVersionItem, CSourceItem, CSequenceItem, CSegmentItem, CReferenceItem, CPrimaryItem, COriginItem, CLocusItem, CKeywordsItem, CFlatItem, CGenomeProjectItem, CGenomeItem, CGapItem, CSourceFeatureItem, CFeatureItem, CFeatHeaderItem, CDeflineItem, CDBSourceItem, CDateItem, CContigItem, CLocalIdComment, CGsdbComment, CHistComment, CGenomeAnnotComment, CCommentItem, CBaseCountItem, CAlignmentItem, CAccessionItem
- x_GatherReferences()
: CFlatGatherer
- x_GatherRemark()
: CReferenceItem
- x_GatherSeqEntry()
: CFlatGatherer
- x_GatherSequence()
: CFlatGatherer
- x_GatherSourceFeatures()
: CFlatGatherer
- x_GatherWGS()
: CGenbankGatherer
- x_GBBSourceComment()
: CFlatGatherer
- x_GC()
: CLoadInfoMap< Key, Info >
- x_GC_CleanDBPart()
: CNCBlobStorage
- x_GC_CleanDBVolume()
: CNCBlobStorage
- x_GC_CollectPartsStatistics()
: CNCBlobStorage
- x_GC_DeleteExpired()
: CNCBlobStorage
- x_GC_IsDBPartEmpty()
: CNCBlobStorage
- x_Gene2Accn_Filter()
: CGeneFileWriter
- x_Gene2Accn_LineToRecord()
: CGeneFileWriter
- x_Gene2Accn_ParseLine()
: CGeneFileWriter
- x_Gene2Accn_ProcessFile()
: CGeneFileWriter
- x_Gene2PM_LineToRecord()
: CGeneFileWriter
- x_Gene2PM_ParseLine()
: CGeneFileWriter
- x_Gene2PM_ProcessFile()
: CGeneFileWriter
- x_GeneIdToGi()
: CGeneInfoFileReader
- x_GeneIdToOffset()
: CGeneInfoFileReader
- x_GeneInfo_LineToRecord()
: CGeneFileWriter
- x_GeneInfo_ParseLine()
: CGeneFileWriter
- x_GeneInfo_ProcessFile()
: CGeneFileWriter
- x_GenerateAutoLabel()
: CPhyloTreeLabel
- x_GenerateLabel()
: CPhyloTreeLabel, CGlDrawScale
- x_GenerateLabelPositions()
: CRuler
- x_GenerateLabels()
: CAxisRenderer
- x_GenerateNewGis()
: CSeqAlignFilter
- x_GenerateTextItemsFromObjects()
: CObjectTextWidget
- x_GenerateTexture()
: IPhyloTreeRenderer
- x_Get()
: CSeq_id_Other_Tree, CSeq_id_Named_annot_track_Tree, CSeq_id_Gpipe_Tree, CSeq_id_Tpd_Tree, CSeq_id_Tpe_Tree, CSeq_id_Tpg_Tree, CSeq_id_Prf_Tree, CSeq_id_Swissprot_Tree, CSeq_id_Pir_Tree, CSeq_id_GB_Tree, CSeq_id_Textseq_Tree, CSeq_id_Gi_Tree, CSeq_id_Gibbmt_Tree, CSeq_id_Gibbsq_Tree, CSeq_id_int_Tree, CStreamPathHookBase, CPathHook, CwxClipboardHelper< wxString >, CwxClipboardHelper< T >, CCompoundRWRegistry, CTwoLayerRegistry, CCompoundRegistry, CMemoryRegistry, IRegistry, CSafeStaticGuard, CEnvironmentRegistry
- x_GetAccVer()
: CScope
- x_GetActiveContainerByPos()
: CDockManager
- x_GetAlignedSeqIds()
: CHitMatrixDataSource
- x_GetAlignGlyphType()
: CAlignmentTrack
- x_GetAlignIter()
: CAnnotObject_Info
- x_GetAlignments()
: CSGAlignmentJob
- x_GetAlignmentScore()
: CAlignFilter
- x_GetAlignmentTooltip()
: CAlnVecRow
- x_GetAlignmentTooltip_Gap()
: CAlnVecRow
- x_GetAlignmentTooltip_General()
: CAlnVecRow
- x_GetAlignmentTooltip_Insert()
: CAlnVecRow
- x_GetAlignmentTooltip_Unaligned()
: CAlnVecRow
- x_GetAlignSmear()
: CSGAlignmentJob
- x_GetAllele()
: CSeq_annot_SNP_Info
- x_GetAlleleIndex()
: CSeq_annot_SNP_Info
- x_GetAln()
: CDiagHit
- x_GetAlnInfo()
: CVecscreen, CAlnGraphic
- x_GetAlnRange()
: CDiagHitElement
- x_GetAlnVecForSeqalign()
: CDisplaySeqalign
- x_GetAmb()
: CSeqDBIdxFile
- x_GetAmbChar()
: CSeqDBVol
- x_GetAmbigSeq()
: CSeqDBVol
- x_GetAnnotCount()
: CSeq_annot_Info
- x_GetAnnotId()
: CProjectFileWriter
- x_GetAnnotName()
: CAlignmentSmear
- x_GetAnnotNames()
: CAnnot_Collector
- x_GetAnnotObject_Info()
: CSeq_feat_Handle
- x_GetAnnotObject_InfoAny()
: CSeq_feat_Handle
- x_GetAnnotObjs()
: CTSE_Info
- x_GetAnnots()
: CSeq_annot_CI
- x_GetAnnotSelector()
: CDensityMapDS
- x_GetAnnotSet()
: CAnnotTypes_CI
- x_GetAPI()
: CNSInfoCollector
- x_GetAppExplorerService()
: CAppExplorerCmdHandler
- x_GetAppTaskService()
: CProjectCmdHandler, CAppExplorerCmdHandler
- x_GetAreaByVPPos()
: CSeqGraphicPane, CCrossAlnPane, CSeqTextPane, CPhyloTreePane, CHitMatrixPane, CGlWidgetPane, CAlnMultiPane
- x_GetAreaByWindowPos()
: CGlWidgetPane, CAlnMultiPane
- x_GetArgs()
: CGBenchApplication
- x_GetArraysCount()
: CComboChartDataSource
- x_GetAsnDefline()
: CSeqDBVol
- x_GetAssociatedGeneInfo()
: CFeatureItem
- x_GetAssociatedProtInfo()
: CFeatureItem
- x_GetAttrSep()
: CGFFFormatter, CGFF3_Formatter
- x_GetAvailableDatabases()
: CBlastServices
- x_GetBarHeight()
: CSequenceTrack
- x_GetBase()
: CSyncQueue_I< Type, Container, TNativeIterator >, ITSE_Assigner
- x_GetBaseFont()
: CPdfFontHandler
- x_GetBaseHeight()
: CAlnVecRow
- x_GetBaseInfo()
: CSeqdesc_CI, CSeq_descr_CI, CSeq_entry_Info
- x_GetBasePkgs()
: CPkgManager
- x_GetBaseWeight()
: CCache< TKey, TValue, THandler, TLock, TSize >
- x_GetBCPDataSize()
: CODBC_BCPInCmd
- x_GetBCPDataType()
: CODBC_BCPInCmd
- x_GetBinRange()
: CLDBlockGlyph, CGwasGlyph, CBinsGlyph
- x_GetBioseq()
: CTSE_Info, ITSE_Assigner
- x_GetBioseq_Info()
: CScope_Impl
- x_GetBioseq_Lock()
: CScope_Impl
- x_GetBioseq_set()
: CTSE_Info, ITSE_Assigner
- x_GetBioseq_set_Id()
: CBioseq_set_Info
- x_GetBioseq_set_Lock()
: CScope_Impl
- x_GetBioseqBinaryHeader()
: CWriteDB_Impl
- x_GetBioseqHandle()
: CSeqMap, CScope_Impl
- x_GetBioseqHandleFromTSE()
: CScope_Impl
- x_GetBit()
: CSeqDBBitVector
- x_GetBl2SeqHits()
: CSplignApp
- x_GetBlast4SearchRequestBody()
: CRemoteBlast
- x_GetBlobAccess()
: CNCBlobStorage
- x_GetBlobLoadInfo()
: CReaderRequestResult
- x_GetBottom()
: CSplitter
- x_GetButtonRect()
: CAlnVecRow
- x_GetCacheID()
: CSeqDBImpl
- x_GetCaptionPanelByWindow()
: CWindowManager
- x_GetCellIndex()
: CSplitter
- x_GetCGIContextParams()
: CBlastHitMatrixCGIApplication
- x_GetChain()
: CNCMMReserve, CNCMMChainsPool
- x_GetCharset()
: CCgiEntry
- x_GetCheckedMultiple()
: CwxTreeCtrlEx
- x_GetChildItems()
: CExplorerItem
- x_GetChildren()
: CFeatTree
- x_GetChunk()
: CNCMMChunksPool
- x_GetChunkIndex()
: CNCMMSlab
- x_GetChunks()
: CAlnMap
- x_GetChunksCnt()
: CNCMMBigBlockSet
- x_GetChunkToLoad()
: CSeqMap
- x_GetClassMark()
: CSeqDBImpl, CSeqDBMemLease, CRegionMap, CSeqDBLockHold
- x_GetCleanupInstances()
: CInstancedAligner
- x_GetClient()
: CTaxTreeTestDlg, CTraceChromatogramLoader
- x_GetClientLabelForMenu()
: CWindowManager
- x_GetClientsInNode()
: CDockContainer
- x_GetCmdFileName()
: CFileDBEngine
- x_GetCoding()
: CSeqVector_CI
- x_GetColor()
: CTemplateScoringMethod, CWidgetDisplayStyle, CComboChart
- x_GetColorArray()
: CSeriesBase
- x_GetColors()
: CSequenceTextGraph
- x_GetColumn()
: CTableFieldHandle_Base, CSplitter
- x_GetColumnId()
: CSeqDBImpl
- x_GetColumnType()
: CAlnMultiRenderer
- x_GetCommandName()
: CELink_Request
- x_GetComment()
: CCommentItem, CSeq_annot_SNP_Info, CCompoundRWRegistry, CTwoLayerRegistry, CCompoundRegistry, CMemoryRegistry, IRegistry, CEnvironmentRegistry
- x_GetCommentIndex()
: CSeq_annot_SNP_Info
- x_GetCompList()
: CCommonComponentScorer
- x_GetConfGraphH()
: CTraceGraph
- x_GetConfig()
: CHistogramGlyph
- x_GetConfigureEntry()
: CMsvcSite
- x_GetConnection()
: CId2Reader, CId1Reader
- x_GetConnectionArgs()
: CNetScheduleControl
- x_GetConsensusSeqVector()
: CAlnVec
- x_GetContainingFolder()
: CGBProject
- x_GetContext()
: CAlnMultiRenderer, CAlnMultiPane, CGlCgiImageApplication, CCgiApplication
- x_GetCount()
: CEntrez2ClientApp
- x_GetCreationOrder()
: CSafeStaticPtr_Base
- x_GetCtx()
: CEUtilsApp
- x_GetCType()
: CStatementBase
- x_GetCurDataSize()
: CStatementBase
- x_GetCurrentConnection()
: CId2Reader
- x_GetCurrentHitTrack()
: CSeqGraphicWidget
- x_GetCurrentMethodName()
: CAlnMultiWidget
- x_GetCurrentStyleView()
: CSettingsSet
- x_GetCurrentSubTask()
: CBlastSearchTask, CCompositeAppTask, CProjectLoadingTask
- x_GetCurrentViewField()
: CSettingsSet
- x_GetData()
: CStatementBase
- x_GetDataElement()
: CSeqDBIsam
- x_GetDataFileName()
: CNCBlobStorage
- x_GetDataPassword()
: CNcbiResourceInfoFile
- x_GetDataPtr()
: CODBC_BCPInCmd
- x_GetDataSize()
: oligofar::CSRead
- x_GetDataSource()
: CNetBLAST_DMSearchTool
- x_GetDataSourceDescr()
: CUIDataSourceService
- x_GetDataSourceFromDescr()
: CUIDataSourceService
- x_GetDataTerminator()
: CODBC_BCPInCmd
- x_GetDataTermSize()
: CODBC_BCPInCmd
- x_GetDateForBioseq()
: CLocusItem
- x_GetDBTree()
: CNetBLASTUIDataSource
- x_GetDbType()
: CDisplaySeqalign
- x_GetDeadLockDetect()
: CBDB_Env
- x_GetDefaults()
: CAnalysisFile
- x_GetDefinesEntry()
: CMsvcSite
- x_GetDeflineInfo()
: CShowBlastDefline
- x_GetDefMethodName()
: CAlnMultiWidget
- x_GetDeltaExtCompList()
: CCommonComponentScorer
- x_GetDescList()
: CBioseq_Base_Info
- x_GetDescr()
: CBioseq_set_Info, CBioseq_Info, CBioseq_Base_Info
- x_GetDescription()
: CAutoDefFeatureClause
- x_GetDescrTooltip()
: CAlnVecRow
- x_GetDiagSeverity()
: CDiagSyntaxParser
- x_GetDiagTS()
: CPSSMAligner, CNWAligner
- x_GetDistanceInstances()
: CInstancedAligner
- x_GetDockPanel()
: CDockManager, CDockContainer
- x_GetDocsums()
: CEntrez2ClientApp
- x_GetDocument()
: CProjectConstPrx
- x_GetDouble()
: CWig2tableApplication
- x_GetDriverName()
: CODBC_Connection
- x_GetDSInfo()
: CScope_Impl
- x_GetDSLocksCount()
: CTSE_ScopeInfo
- x_GetDstDendiag()
: CSeq_align_Mapper_Base
- x_GetDstDenseg()
: CSeq_align_Mapper_Base
- x_GetDstDisc()
: CSeq_align_Mapper_Base
- x_GetDstExon()
: CSeq_align_Mapper_Base
- x_GetDstPacked()
: CSeq_align_Mapper_Base
- x_GetDstSparse()
: CSeq_align_Mapper_Base
- x_GetDstSpliced()
: CSeq_align_Mapper_Base
- x_GetDstStd()
: CSeq_align_Mapper_Base
- x_GetDumpgnlLink()
: CDisplaySeqalign
- x_GetEffectiveRange()
: CAlnGraphic
- x_GetEmptySet()
: CNCMMSizePool
- x_GetEnabledTestsCount()
: CNcbiTestApplication
- x_GetEncode()
: CBioseqContext
- x_GetEncoded()
: CNcbiResourceInfo
- x_GetEnv()
: CRemoteAppJob
- x_GetErrCode()
: CException
- x_GetError()
: CCompressionStream, CId2ReaderBase
- x_GetExonDescription()
: CAutoDefFeatureClause
- x_GetExplorerItem()
: CProjectTreePanel
- x_GetExtra()
: CSeq_annot_SNP_Info
- x_GetExtraIndex()
: CSeq_annot_SNP_Info
- x_GetExtraInfo()
: CFeatGlyph, CCdsGlyph
- x_GetFakeDataSource()
: CwxSettingsDlg, CSeqGraphicConfigPanel
- x_GetFastaReaderDeflines()
: CWriteDB_Impl
- x_GetFeatIndex()
: CSeq_feat_Handle
- x_GetFeatIter()
: CAnnotObject_Info
- x_GetFeatsOnCdsProduct()
: CFlatGatherer
- x_GetFeatureClauseProductEnding()
: CAutoDef
- x_GetFeatureClauses()
: CAutoDef
- x_GetFeatureCode()
: CObjectIndex
- x_GetFeatureId()
: CGuideTree
- x_GetFeatureInfo()
: CDisplaySeqalign
- x_GetFeaturesById()
: CTSE_Info
- x_GetFeaturesByLocus()
: CTSE_Info
- x_GetFeatureTypeWord()
: CAutoDefFeatureClause
- x_GetFeedbackAgentPath()
: CGBenchMonitorApp
- x_GetFileRange()
: CSeqDBColumn
- x_GetFilteredBinaryHeader()
: CSeqDBVol
- x_GetFilteredHeader()
: CSeqDBVol
- x_GetFiltInfo()
: CSeqDBImpl
- x_GetFirstDesc()
: CSeq_entry_Info, CBioseq_Base_Info
- x_GetFirstEndSegmentIndex()
: CSeqMap
- x_GetFirstFreePtr()
: CNCMMBlocksSet
- x_GetFlags()
: CAsn2FlatApp, CAsn2FastaApp, CGFFReader
- x_GetFolder()
: CDataLoadingAppJob
- x_GetFormat()
: CAsn2FlatApp, CAsn2FastaApp
- x_GetFrom()
: CAsn2FlatApp, CAsn2FastaApp
- x_GetGapCount()
: CAlnTableDS
- x_GetGeneID()
: CGFFFormatter
- x_GetGeneidLabel()
: CHG_Gene
- x_GetGeneLinkUrl()
: CDisplaySeqalign
- x_GetGeneName()
: CAutoDefFeatureClause
- x_GetGeneRefViaCDS()
: CDeflineGenerator
- x_GetGenericInterval()
: CAutoDefFeatureClause
- x_GetGenomicExtent()
: CSplign
- x_GetGi()
: CProjectFileWriter, CScope
- x_GetGlobalConfig()
: CLayoutTrack
- x_GetGPos()
: CRWStreambuf
- x_GetGraphIter()
: CAnnotObject_Info
- x_GetGraphName()
: CSGSeqGraphJob
- x_GetGroupIndex()
: CGroupMapWidget, CArgDescriptions
- x_GetGSRR()
: CRemoteBlast
- x_GetGuiRegistryPath()
: CAlignMultipleDemoApp, CFrameworkDemoApp, CGBenchApp, CwxNCBIApp
- x_GetHandler()
: CImageIO
- x_GetHdr()
: CSeqDBImpl, CSeqDBIdxFile
- x_GetHdrAsn1()
: CSeqDBVol
- x_GetHdrAsn1Binary()
: CSeqDBVol
- x_GetHeaders()
: CMsvcProjectMakefile
- x_GetHeaderSize()
: oligofar::CSRead
- x_GetHeight()
: CSplitter
- x_GetHelpUrl()
: IHelpHandler
- x_GetHitDeflineInfo()
: CShowBlastDefline
- x_GetHost()
: CMouseZoomHandler, CMinimapHandler, CAlnVecRow, CAlignMarkHandler
- x_GetIconIdxById()
: CLayoutTrack
- x_GetIconRect()
: CLayoutTrack
- x_GetIconState()
: CLayoutTrack
- x_GetIconsTooltip()
: CAlnVecRow
- x_GetId()
: CSeqDBIsam, CElementaryMatching
- x_GetIdIndex()
: CwxChooseSeqDlg
- x_GetIdLength()
: oligofar::CSRead
- x_GetIdObjects()
: CTSE_Info
- x_GetIdOffset()
: oligofar::CSRead
- x_GetIds()
: CValidError_align
- x_GetIdx()
: CSpliceRanker
- x_GetImageIndexByAlias()
: CAppExplorerService
- x_GetImpl()
: CScopeTransaction, CGBReleaseFile
- x_GetImplementation()
: CFeature_table_reader, CGen_code_table, CSeqportUtil
- x_GetIndex()
: CSeqMap_CI, CSeqMap_CI_SegmentInfo
- x_GetIndexByWindowPos()
: CSelectionControl, CMapControl
- x_GetIndexFileName()
: CNCBlobStorage
- x_GetIndexKeyOffset()
: CSeqDBIsam
- x_GetIndexString()
: CSeqDBIsam
- x_GetIndicator()
: CStatementBase
- x_GetInfo()
: CEntrez2ClientApp, CFeatTree, CSeq_entry_EditHandle, CSeq_entry_Handle, CSeq_annot_EditHandle, CSeq_annot_Handle, CBioseq_set_EditHandle, CBioseq_set_Handle, CBioseq_EditHandle, CBioseq_Handle, CSeq_id_Handle
- x_GetInput()
: CDebugDumpViewer
- x_GetInserts()
: CDisplaySeqalign
- x_GetInstance()
: CObjectFactory, CObjFingerprint
- x_GetIntergenicSpacerClauseList()
: CAutoDef
- x_GetInterval()
: CWorkerNodeIdleThread
- x_GetIntron()
: CFeatGlyph
- x_GetIStreamCache()
: CLDS_DataLoader
- x_GetITDescriptor()
: CODBC_CursorCmdExpl, CODBC_CursorCmd, CDBL_CursorCmd, CTL_CursorCmdExpl, CTL_CursorCmd
- x_GetItem()
: CMapControl, CSelListModelImpl< Item >, CAlnMultiModel, CDiagConsoleCache
- x_GetItemData()
: CThemeConfigPanelBase
- x_GetItemIndex()
: CSelListModelImpl< Item >, CAlnMultiModel
- x_GetItemInfo()
: CItemsInfo
- x_GetItems_Object()
: CObjectTextWidget
- x_GetItemsCount()
: CSelectionControl, CSelListModelImpl< Item >, CAlnMultiModel
- x_GetItemsFromIds()
: CProjectTreePanel
- x_GetItemShift()
: CMapItem, CGroupMapWidget::CGroupItem
- x_GetIterator()
: CSeqVector
- x_GetJobDetails()
: CGridJobStatus
- x_GetJobName()
: CXmlRetrieveJob, CTextRetrieveJob, CFlatFileRetrieveJob, CFlatFeatureRetrieveJob, CFastaRetrieveJob, CAsnRetrieveJob
- x_GetJobRecord()
: CAppJobDispatcher
- x_GetJobStatus()
: SNetScheduleAPIImpl
- x_GetJobTypeString()
: CProjectServiceTestJob
- x_GetKeys()
: CGuiRegistry::CReadView
- x_GetKeyState()
: CMouseZoomHandler
- x_GetKeywords()
: CFlatItemFormatter
- x_GetLabel()
: CAnalysisFileLoader, CPhyloTreeLabel
- x_GetLabels()
: CBlastHitMatrix
- x_GetLabelSize()
: CRuler
- x_GetLabelValue()
: CAxisRenderer
- x_GetLastEndSegmentIndex()
: CSeqMap
- x_GetLaterDate()
: CLocusItem
- x_GetLeft()
: CSplitter
- x_GetLen()
: CAlnMap
- x_GetLength()
: CAlignSeqTableModel
- x_GetLevelEnd()
: CSeqMap_CI_SegmentInfo
- x_GetLevelPos()
: CSeqMap_CI_SegmentInfo
- x_GetLevelRealEnd()
: CSeqMap_CI_SegmentInfo
- x_GetLevelRealPos()
: CSeqMap_CI_SegmentInfo
- x_GetLimitTSE()
: SSeqMapSelector
- x_GetLine()
: CWig2tableApplication
- x_GetLinearAlignments()
: CAlnMultiDSBuilder
- x_GetLineByVPY()
: CAlnMultiRenderer
- x_GetLineByWindowY()
: CAlnMultiRenderer, CAlnMultiPane
- x_GetLineNumber()
: CGFFReader
- x_GetLineRect()
: CAlnMultiRenderer, CAlnMultiPane
- x_GetLineType()
: CWiggleReader
- x_GetLinkCounts()
: CEntrez2ClientApp
- x_GetLinked()
: CEntrez2ClientApp
- x_GetLinks()
: CEntrez2ClientApp
- x_GetLoadedState()
: CThemeDlg
- x_GetLoaderByName()
: CObjectManager
- x_GetLoaderParams()
: CGBDataLoader
- x_GetLocal()
: CGuiRegistry
- x_GetLocation()
: CAsn2FlatApp, CAsn2FastaApp
- x_GetLocsIter()
: CAnnotObject_Info
- x_GetLongestProtein()
: CDeflineGenerator
- x_GetMainWindow()
: CGBenchGUI, CFrameworkDemoGUI
- x_GetMap()
: CPhyloTreeCGIApplication
- x_GetMappedRanges()
: CSeq_loc_Mapper_Base
- x_GetMappedSeq_loc()
: CSeq_loc_Mapper_Base
- x_GetMarker()
: CComboChart
- x_GetMarkRect()
: CSeqMarkHandler, CBookmarksHandler
- x_GetMarkString()
: CSeqDBImpl, CSeqDBMemLease, CRegionMap, CSeqDBLockHold
- x_GetMaskDataColumn()
: CSeqDBImpl
- x_GetMaskDataColumnId()
: CWriteDB_Impl
- x_GetMaskingStates()
: CFastaOstream
- x_GetMasks()
: CRemoteBlast
- x_GetMasterForPart()
: CBioseqContext
- x_GetMatches()
: CSequenceSearchJob, CObjectIndex
- x_GetMatchType()
: CVecscreen
- x_GetMate()
: oligofar::CSRead
- x_GetMatrixName()
: CPssmEngine
- x_GetMaxDataSize()
: CStatementBase
- x_GetMaxNum()
: CRuler
- x_GetMemberId()
: CAsnElementItem
- x_GetMemberObject()
: CAsnRetrieveJob
- x_GetMemoryFileSegment()
: CMemoryFileMap
- x_GetMessageError()
: CId2ReaderBase
- x_GetMetaFileName()
: CNCBlobStorage
- x_GetMetaphoneKeys()
: CSimpleDictionary
- x_GetMethodTrace()
: CTracingHandler
- x_GetMinimized()
: CSplitter
- x_GetMinVolumeId()
: CNCBlobStorage
- x_GetMismatchCount()
: CAlnTableDS
- x_GetMode()
: CAsn2FlatApp, CAsn2FastaApp
- x_GetModeByCommand()
: CSelectionPanel, CDataMiningPanel
- x_GetModel()
: CAlnMultiPane
- x_GetModifierIndexList()
: CAutoDef
- x_GetModule()
: SDiagMessage
- x_GetMolInfo()
: CBioseqContext
- x_GetMyDataSet()
: CThemePreviewMediator, CThemeMediator
- x_GetMyPanel()
: CThemePreviewMediator, CThemeMediator
- x_GetName()
: CTaxTreeBrowser
- x_GetNamedScore()
: CSeq_align
- x_GetNativeITDescriptor()
: CDBL_Connection, CTL_Connection
- x_GetNcbi4na_colorsp()
: oligofar::CQueryHash
- x_GetNcbi4na_ncbi8na()
: oligofar::CQueryHash
- x_GetNcbi4na_ncbipna()
: oligofar::CQueryHash
- x_GetNcbi4na_ncbiqna()
: oligofar::CQueryHash
- x_GetNcbi4na_quality()
: oligofar::CQueryHash
- x_GetNewOLTModel()
: CSequenceSearchJob, COrfSearchJob, CEntrezSearchJob, CCpgSearchJob, CNetBLAST_DMSearchJob, CSearchJobBase
- x_GetNewTag()
: CPhrapReader
- x_GetNextComp()
: CSplignApp
- x_GetNextCounter()
: CCache< TKey, TValue, THandler, TLock, TSize >
- x_GetNextDesc()
: CSeq_entry_Info, CBioseq_Base_Info
- x_GetNextInCmdMap()
: CNetServProtoParserBase
- x_GetNextJob()
: CGridWorkerNode
- x_GetNextPair()
: CSplignApp
- x_GetNextSegment()
: CSeqMap_CI_SegmentInfo
- x_GetNode()
: CGuideTree
- x_GetNodeFeature()
: CGuideTree
- x_GetNoncodingProductFeatProduct()
: CAutoDefFeatureClause
- x_GetNotCachedPartId()
: CNCBlobStorage
- x_GetNumericArray()
: CSeriesBase
- x_GetNumericData()
: CSeqDBIsam
- x_GetNumericKey()
: CSeqDBIsam
- x_GetNumericSample()
: CSeqDBIsam
- x_GetNumGaps()
: CDisplaySeqalign
- x_GetNumOIDs()
: CSeqDBVolSet, CSeqDBImpl
- x_GetNumPubMedLinksForGeneId()
: CGeneFileWriter
- x_GetNumSeqs()
: CSeqDBImpl, CAlnTableDS
- x_GetNumSeqsStats()
: CSeqDBImpl
- x_GetObject()
: CSeqMap, CSeq_entry_Info, CSeq_annot_Info, CBioseq_set_Info, CBioseq_Info
- x_GetObjectManager()
: CDataLoaderFactory
- x_GetOffsetForGeneId()
: CGeneFileWriter
- x_GetOffsetForVariations()
: CSeqTextPane
- x_GetOid()
: CSeqDBIsam, CBlastDbDataLoader
- x_GetOidList()
: CSeqDBImpl
- x_GetOidMask()
: CSeqDBOIDList
- x_GetOldTag()
: CPhrapReader
- x_GetOM()
: CSimpleOM
- x_GetOpenDict()
: CBDB_BlobDictStore< Key, Dictionary, Store >
- x_GetOpenStore()
: CBDB_BlobDictStore< Key, Dictionary, Store >
- x_GetOperationMode()
: CBlastDBAliasApp
- x_GetOpTypeByEvent()
: CTextSelHandler, CLinearSelHandler
- x_GetOpTypeByState()
: CLinearSelHandler
- x_GetOrganism()
: CAlignSeqTableModel
- x_GetOrgModLabel()
: CAutoDefModifierCombo
- x_GetOrgnameForTaxId()
: CGeneFileWriter
- x_GetOrgRef()
: CAlignGroup
- x_GetOriginMetricSizeV()
: CRuler
- x_GetOrigObject()
: CSnpTableView, CViewGraphic, CFeatTableView, CTextView, CPhyTreeView, CMultiAlignView, CMPCrossAlignView, CDotMatrixView, CCrossAlignView, CAnnotCompareView, CAlignSpanView, CProjectViewBase
- x_GetOutputSize()
: CCompressionStream
- x_GetPacked2naSeqData()
: CSeqVector
- x_GetPacked4naSeqData()
: CSeqVector
- x_GetPacked8SeqData()
: CSeqVector
- x_GetPageHeight()
: CPrintOptions
- x_GetPageNameByWindow()
: CDockNotebook, CDockContainer
- x_GetPageNumElements()
: CSeqDBIsam
- x_GetPageScaling()
: CPageHandler
- x_GetPageWidth()
: CPrintOptions
- x_GetPairType()
: oligofar::CSRead
- x_GetPane()
: CSeqTextWidget, CSeqGraphicWidget, CPhyloTreeWidget, CHitMatrixWidget, CGlWidgetBase, CAlnMultiWidget, CCrossAlnWidget
- x_GetPanel()
: CTextDataSource
- x_GetPanelNumber()
: CPanelGrid
- x_GetPanelOffset()
: CPageHandler
- x_GetParamName()
: CWig2tableApplication
- x_GetParamsAsRegSetting()
: CCreateNeedlemanWunschToolManager, CAutodefToolManager, CWindowMaskerTool, CCleanupTool, CTreeBuilderTool, CSplignTool, CMergeAlignmentsToolManager, CGroupAlignmentsToolManager, CFindOverlapTool, CCreateGeneModelToolManager, CCleanupAlignmentsToolManager, CAlgoToolManagerBase
- x_GetParamsPanel()
: CCreateNeedlemanWunschToolManager, CAutodefToolManager, CWindowMaskerTool, CCleanupTool, CTreeBuilderTool, CSplignTool, CMergeAlignmentsToolManager, CGroupAlignmentsToolManager, CFindOverlapTool, CCreateGeneModelToolManager, CCleanupAlignmentsToolManager, CAlgoToolManagerBase
- x_GetParamValue()
: CWig2tableApplication
- x_GetParent()
: CSeqGraphicPane, CGlPaneWidgetChildDemo, CCrossAlnPane, CFeatTree, CSeqTextPane, CPhyloTreePane, CHitMatrixPane, CAlnMultiPane
- x_GetParsedQuery()
: CEntrez2ClientApp
- x_GetPartialDenseg()
: CSeq_align_Mapper_Base
- x_GetPartNumber()
: CBioseqContext
- x_GetPartsFromReply()
: CBlastServices
- x_GetPendingTasksCount()
: CAppTaskServiceSlot
- x_GetPipeName()
: CGBenchPipe
- x_GetPlainSeq_feat()
: CSeq_feat_Handle
- x_GetPluginManager()
: CObjectManager
- x_GetPointerArray()
: CSeriesBase
- x_GetPos()
: CWig2tableApplication
- x_GetPositionLabel()
: CRuler
- x_GetPPos()
: CRWStreambuf
- x_GetProcessedSize()
: CCompressionStream
- x_GetProductId()
: CPromote
- x_GetProductName()
: CAutoDefNcRNAClause, CAutoDefFeatureClause
- x_GetProjectService()
: CWorkspaceConstPrx, CProjectCmdHandler
- x_GetProjectsLock()
: CWorkspaceConstPrx, CProjectService
- x_GetPropertyByName()
: CCgiRequest
- x_GetProteinId()
: CPromote
- x_GetProtOffset()
: CCdsGlyph
- x_GetPseudo()
: CFeatureItem
- x_GetPutativeMatches()
: CCompareSeqRegions
- x_GetQual()
: CFeatureItem
- x_GetQualityCodesIndex()
: CSeq_annot_SNP_Info
- x_GetQualityCodesOs()
: CSeq_annot_SNP_Info
- x_GetQualityCodesStr()
: CSeq_annot_SNP_Info
- x_GetQueries()
: CBlastDBCmdApp
- x_GetQuery()
: CPssmEngine
- x_GetQueryFeatureList()
: CDisplaySeqalign
- x_GetQueryLength()
: CPssmEngine
- x_GetQueueSize()
: CThreadPool_Impl
- x_GetRangeForMixLoc()
: CLayoutFeat
- x_GetRangeLength()
: CSeq_loc_Mapper_Base
- x_GetRangeMap()
: SIdAnnotObjs
- x_GetRangeMapCount()
: SIdAnnotObjs
- x_GetRawSegFromSeg()
: CAlnMap
- x_GetRawSegType()
: CAlnMap
- x_GetRawSegTypes()
: CAlnMap
- x_GetRawStart()
: CAlnMap
- x_GetRawStop()
: CAlnMap
- x_GetReader()
: CWinMaskCountsGenerator, SegMaskerApplication, CDustMaskApplication, CConvert2BlastMaskApplication, CBlobStorage_NetCache
- x_GetReaderManager()
: CGBDataLoader
- x_GetReaderName()
: CGBDataLoader
- x_GetReadView()
: CSettingsSet
- x_GetRecordByRow()
: CAlnMultiModel
- x_GetRecords()
: CGBDataLoader, CTSE_Split_Info, CTSE_Info, CTSE_Chunk_Info, CDataSource
- x_GetRecsSortedByLength()
: CAlignedFeatureGraph
- x_GetRefMinusStrand()
: CSeqMap
- x_GetRefPosition()
: CSeqMap
- x_GetRefSeqid()
: CSeqMap
- x_GetRegion()
: CSeqDBExtFile, CSeqDBAtlas
- x_GetRegisteredEngine()
: CAppJobDispatcher
- x_GetRegistryRef()
: CGuiRegistry
- x_GetReportName()
: CEFetch_Taxonomy_Request
- x_GetRepr()
: CBioseqContext
- x_GetRequest()
: CNSInfoCollector, CNSJobInfo
- x_GetRequestInfo()
: CRemoteBlast
- x_GetRequestInfoFromFile()
: CRemoteBlast
- x_GetRequestInfoFromRID()
: CRemoteBlast
- x_GetResource()
: CCgiApplication
- x_GetResult()
: CNSInfoCollector, CNSJobInfo
- x_GetRetModeName()
: CELink_Request, CEFetch_Request
- x_GetRetTypeName()
: CESearch_Request, CEFetch_Sequence_Request, CEFetch_Literature_Request
- x_GetRight()
: CSplitter
- x_GetRing()
: CGlTube< Curve >
- x_GetRow()
: CTableFieldHandle_Base, CSplitter
- x_GetRowByLine()
: CAlnMultiModel
- x_GetRowLength()
: CScoringJob
- x_GetRowSeqLoc()
: CMultiAlignView
- x_GetRowTooltip()
: CAlnMultiRenderer
- x_GetSampleHspStream()
: CTracebackSearchTestFixture
- x_GetScaledPageSize()
: CPageHandler
- x_GetScheduledJob()
: CSchedulerEngine
- x_GetScope()
: CBuildDatabase, CProjectViewBase
- x_GetScopeImpl()
: CScopeInfo_Base, CTSE_Handle, CSeq_entry_Handle, CSeq_annot_Handle, CBioseq_set_Handle, CBioseq_Handle
- x_GetScopeInfo()
: CTSE_Handle, CSeq_entry_EditHandle, CSeq_entry_Handle, CSeq_annot_EditHandle, CSeq_annot_Handle, CBioseq_set_EditHandle, CBioseq_set_Handle, CBioseq_EditHandle, CBioseq_Handle
- x_GetScore()
: CMultiAligner
- x_GetScoreInfo()
: CShowBlastDefline
- x_GetScoreInfoForTable()
: CShowBlastDefline
- x_GetScoreOneCol()
: CMultiAligner
- x_GetScoringMRUListName()
: CAlnMultiWidget
- x_GetScrollValueForSourcePos()
: CSeqTextWidget
- x_GetSearchPath()
: CMetaRegistry
- x_GetSearchResults()
: CRemoteBlast
- x_GetSection()
: CSettingsSet
- x_GetSegFromRawSeg()
: CAlnMap
- x_GetSegment()
: CSeqMap_CI, CSeqMap_CI_SegmentInfo, CSeqMap
- x_GetSegmentEndPosition()
: CSeqMap
- x_GetSegmentException()
: CSeqMap
- x_GetSegmentInfo()
: CSeqMap_CI
- x_GetSegmentLength()
: CSeqMap
- x_GetSegmentPosition()
: CSeqMap
- x_GetSegs()
: CDisplaySeqalign
- x_GetSelected()
: CProjectCmdHandler
- x_GetSelectedAnnotName()
: CwxAnnotConfigDlg, CAnnotConfigDlg
- x_GetSelectedClient()
: CDataMiningPanel
- x_GetSelectedClients()
: CWindowsDlg
- x_GetSelectedDBItem()
: CBLAST_DB_Dialog
- x_GetSelectedId()
: CwxChooseSeqDlg
- x_GetSelectedItems()
: CSelListModelImpl< Item >, CAppExplorerCmdHandler
- x_GetSelectedMRUFilenames()
: CProjectLoadOptionPanel
- x_GetSelectedTasks()
: CTaskTablePanel
- x_GetSelectedType()
: CScoreMethodsDlg
- x_GetSelectionRect()
: CSelectionHelper
- x_GetSelections()
: CFeatureCheckPanel
- x_GetSelfHitHspStream()
: CTracebackSearchTestFixture
- x_GetSelfLoc()
: CCompareSeqRegions
- x_GetSelfScores()
: CDistances
- x_GetSemPred()
: CBlockingQueue< TRequest >
- x_GetSeq()
: CSeqDBIdxFile, CSeqDBIter
- x_GetSeq_align()
: CSeq_align_Handle
- x_GetSeq_annot_Info()
: CSeq_feat_Handle
- x_GetSeq_annot_Lock()
: CScope_Impl
- x_GetSeq_annotCore()
: CSeq_annot_Handle
- x_GetSeq_data()
: CSeqMap
- x_GetSeq_entry_Lock()
: CScope_Impl
- x_GetSeq_feat()
: CDeleteSeqFeatCommand
- x_GetSeq_graph()
: CSeq_graph_Handle
- x_GetSeq_id_Info()
: CScope_Impl
- x_GetSeqalign()
: CMultiAligner
- x_GetSeqAlignIds()
: CHitMatrixDataSource
- x_GetSeqAnnot()
: CBlastHitMatrixCGIApplication
- x_GetSeqAnnotFromBlastResults()
: CNetBlastLoadingJob
- x_GetSeqBuffer()
: CSeqDBImpl
- x_GetSeqFromSeqData()
: CSeqportUtil_implementation
- x_GetSeqGI()
: CSeqDBImpl
- x_GetSeqHistCompList()
: CCommonComponentScorer
- x_GetSeqIdNoCheck()
: CBioObjectId
- x_GetSeqLeftSeg()
: CAlnMap
- x_GetSeqLength()
: CSeqDBImpl, CCompartApp, CAlnTableDS
- x_GetSeqMap()
: CSeqMap_CI, CSeqMap_CI_SegmentInfo
- x_GetSeqMatch()
: CDataSource_ScopeInfo, CDataSource
- x_GetSeqRangeSelection()
: CMultiAlignView
- x_GetSeqResidueOffset()
: CSeqDBVol
- x_GetSeqRightSeg()
: CAlnMap
- x_GetSeqsFromReply()
: CBlastServices
- x_GetSeqType()
: CSeqDBVol, CSeqDBExtFile
- x_GetSequence()
: CSeqDBVol, CSequenceSearchJob, CCrossPanelIR
- x_GetSequenceCoding()
: oligofar::CSRead
- x_GetSequenceLength()
: oligofar::CSRead
- x_GetSequenceOffset()
: oligofar::CSRead
- x_GetSequenceRowFromScrollLine()
: CSeqTextPane
- x_GetSequences()
: CBlastServices
- x_GetSeqVector()
: CSparseAln, CAlnVec
- x_GetServerContext()
: CCgiContext
- x_GetSessionIndexByID()
: CSearchToolBase
- x_GetSessionIndexByListener()
: CSearchToolBase
- x_GetSessionIndexByQuery()
: CSearchToolBase
- x_GetSetsCurrentStyleKey()
: CThemeSet
- x_GetShowDisplayLevel()
: CFeaturePanel
- x_GetSignalGraphH()
: CTraceGraph
- x_GetSingleSelectedItem()
: CProjectTreePanel
- x_GetSize()
: CSeqVector_CI
- x_GetSizeIndex()
: CNCDBStat
- x_GetSkipAfter()
: CSeqMap_CI_SegmentInfo
- x_GetSkipBefore()
: CSeqMap_CI_SegmentInfo
- x_GetSkipUnknownDefault()
: CObjectIStream
- x_GetSkipUnknownVariantsDefault()
: CObjectIStream
- x_GetSNP_annot_Info()
: CSeq_feat_Handle, CSeq_annot_Info
- x_GetSNP_Info()
: CSeq_feat_Handle, CTSE_Info
- x_GetSNP_InfoAny()
: CSeq_feat_Handle
- x_GetSNPFeatCount()
: CSeq_annot_Info
- x_GetSortName()
: CESearch_Request
- x_GetSourceFeatViaCDS()
: CDeflineGenerator
- x_GetSourceName()
: CGFFFormatter
- x_GetSourcePosForPortScrollValue()
: CSeqTextWidget
- x_GetSpanFigure()
: CNCServerStat
- x_GetSpecies()
: CAltValidator
- x_GetSplicedSeqTitle()
: CFeatGlyph
- x_GetSpliceScores()
: CSplicedAligner32, CSplicedAligner16, CSplicedAligner
- x_GetSQLType()
: CStatementBase
- x_GetStackTrace()
: CException
- x_GetStart()
: CScoringJob
- x_GetStartStop()
: CAlnTableDS
- x_GetState()
: CNCMessageHandler, CRemoteBlast
- x_GetStateByStatus()
: CThreadPoolEngine
- x_GetStatement()
: CNCDBFile
- x_GetStatus()
: CCompressionStream
- x_GetStatusNoLock()
: CJobStatusTracker
- x_GetStatusString()
: CAppJobDispatcher
- x_GetStop()
: CScoringJob
- x_GetStopFlag()
: CWorkerNodeIdleThread
- x_GetStrand()
: CSequenceDataTester
- x_GetStreamCount()
: CLDS_IStreamCache
- x_GetStrForPrimary()
: CPrimaryItem
- x_GetString()
: CConfig, CCgiCookie
- x_GetStringArray()
: CSeriesBase
- x_GetStringListQual()
: CFeatureItem
- x_GetStringQual()
: CFeatureItem
- x_GetStrm()
: COStreamHelper
- x_GetStyle()
: CAsn2FlatApp, CAsn2FastaApp
- x_GetStyleKey()
: CSettingsSet
- x_GetStyleName()
: CSettingsSet
- x_GetStyleSection()
: CSettingsSet
- x_GetStyleView()
: CSettingsSet
- x_GetSubjectSequence()
: CPssmCreateTestFixture, CPsiBlastInputData
- x_GetSubObject()
: CEditObjectDlg
- x_GetSubSeqMap()
: CSeqMap
- x_GetSubSourceLabel()
: CAutoDefModifierCombo
- x_GetSubstate()
: CMinimapHandler
- x_GetSybaseCmd()
: CTL_RowResult, CTL_BCPInCmd, CTL_Cmd
- x_GetSybaseConn()
: CTL_Connection
- x_GetSynonyms()
: CScope_Impl
- x_GetTag()
: CPhrapReader
- x_GetTaskProgressCallback()
: CTaskProgressReporter
- x_GetTaxDefline()
: CSeqDBVol
- x_GetTaxId()
: CAlignGroup
- x_GetTaxonomy()
: CSeqDBVol
- x_GetTaxonSpecies()
: CAltValidator
- x_GetTBHeight()
: CLayoutTrack
- x_GetTBRect()
: CLayoutTrack, CFeaturePanel
- x_GetTermHierarchy()
: CEntrez2ClientApp
- x_GetTermList()
: CEntrez2ClientApp
- x_GetTermPos()
: CEntrez2ClientApp
- x_GetText()
: CFastaSeqHdrItem, CSeqMarkHandler, CObjClipboard
- x_GetTextAreaSize()
: CAppTaskServiceSlot
- x_GetTextAreaWidth()
: CMapItem
- x_GetThreeColorScore()
: CColumnScoringMethod
- x_GetTicksLabelsSizeV()
: CRuler
- x_GetTitle()
: CMatePairGlyph, CFastaTitleItem, CAlignSeqTableModel
- x_GetTlsData()
: CTlsBase
- x_GetTo()
: CAsn2FlatApp, CAsn2FastaApp
- x_GetToken()
: CNetServProtoParserBase
- x_GetTool()
: CSequenceSearchForm, COrfSearchForm, CFeatureSearchForm, CEntrezSearchForm, CCpgSearchForm, CComponentSearchForm, CNetBLAST_DMSearchForm, CSearchFormBase
- x_GetTooltip()
: CAlignedFeatureGraph
- x_GetTooltipCITED()
: CBinsGlyph
- x_GetTooltipCLIN()
: CBinsGlyph
- x_GetTooltipGAP()
: CBinsGlyph
- x_GetTooltipGCAT()
: CBinsGlyph
- x_GetTooltipSequence()
: CAlnVecRow
- x_GetTop()
: CSplitter
- x_GetTopItems()
: CAppExplorerService
- x_GetTopOffset()
: CSeqMap_CI, CSeqMap_CI_SegmentInfo
- x_GetTotalLength()
: CSeqDBImpl
- x_GetTotalLengthStats()
: CSeqDBImpl
- x_GetTrackValues()
: CReaderBase
- x_GetTranscriptId()
: CPromote
- x_GetTranscriptID()
: CGFFFormatter
- x_GetTree()
: CSeq_id_Mapper
- x_GetTrimmedTestName()
: CNcbiTestApplication
- x_GetTSE_Info()
: CTSE_Handle, CAnnot_Collector
- x_GetTSE_Lock()
: CScope_Impl
- x_GetTSE_ScopeInfo()
: CScopeInfo_Base
- x_GetTSESetWithBioseqAnnots()
: CScope_Impl
- x_GetTSESetWithOrphanAnnots()
: CScope_Impl
- x_GetTwoColorScore()
: CColumnScoringMethod
- x_GetUids()
: CEntrez2ClientApp
- x_GetUndoManager()
: CProjectView
- x_GetUnnamedAnnotObjs()
: CTSE_Info
- x_GetUnnamedIdObjects()
: CTSE_Info
- x_GetUnsavedProjects()
: CProjectTask
- x_GetUpperDescriptors()
: CCleanup_imp
- x_GetUrl()
: CDisplaySeqalign
- x_GetUserCompList()
: CCommonComponentScorer
- x_GetValidInputData()
: CMultiAlignView
- x_GetValue()
: CTL_BCPInCmd, CTlsBase
- x_GetValueAt()
: CClipboard
- x_GetVar()
: CDataTypeModule
- x_GetVerifyData()
: CSerialObject
- x_GetVerifyDataDefault()
: CObjectOStream, CObjectIStream
- x_GetVersion()
: CSeq_id_Textseq_Tree
- x_GetView()
: CAsn2FlatApp, CAsn2FastaApp
- x_GetViewLabel()
: CAppExplorerService
- x_GetViewRegistryPath()
: CViewManagerService
- x_GetViews()
: CGBDocument
- x_GetVisRange()
: CDataTrack
- x_GetVolumeLength()
: CSeqDBImpl
- x_GetVolumeList()
: CDirTest, CDbTest
- x_GetVolumeName()
: CNCBlobStorage
- x_GetVolumeNames()
: CSeqDBAliasNode
- x_GetVPPosByWindowPos()
: CAlnMultiPane
- x_GetVScrollMax()
: CSeqTextWidget
- x_GetWidth()
: CSplitter
- x_GetWord()
: CWig2tableApplication
- x_GetWorkspaceLock()
: CProjectService
- x_GetWritable()
: CGuiRegistry
- x_GetWriter()
: CWinMaskConfig, SegMaskerApplication, CDustMaskApplication, CConvert2BlastMaskApplication
- x_GetWriterManager()
: CGBDataLoader
- x_GiToGeneId()
: CGeneInfoFileReader
- x_GiToOffset()
: CGeneInfoFileReader
- x_GoodSeg()
: CHitMatrixDataSource
- x_GPos
: CConn_Streambuf, CRWStreambuf
- x_Greater()
: CPhyloTreeNode
- x_GrowCell()
: CSplitter
- x_GuardedLock()
: CSyncQueue< Type, Container >
- x_GuardedUnlock()
: CSyncQueue< Type, Container >
- x_GuardProteinQuery()
: CPssmCreateTestFixture, CPssmEngine
- x_GuessFormat()
: CFileLoader
- x_HandleAccels()
: CGlWidgetPane
- x_HandleArgs()
: CGBenchApplication
- x_HandleError()
: CGlCgiImageApplication
- x_HandleKeyEvent()
: CPhyloTreePane
- x_HandlePanelCommand()
: CWindowManager
- x_HandleProcessError()
: CWorkerNodeRequest
- x_HandleRemote()
: CGBenchApplication
- x_Handlers_handle()
: CGlWidgetPane
- x_HandleRunJobError()
: CGridThreadContext
- x_HasAmbig()
: CSeqConvert_imp
- x_HasAmbigIupacna()
: CSeqConvert_imp
- x_HasAmbigNcbi4na()
: CSeqConvert_imp
- x_HasAmbigNcbi8na()
: CSeqConvert_imp
- x_HasEntry()
: CCompoundRWRegistry, CTwoLayerRegistry, CCompoundRegistry, CMemoryRegistry, IRegistry, CEnvironmentRegistry
- x_HasEvent()
: CStatusBarService
- x_HasIdObjects()
: CTSE_Info
- x_HasLimitTSE()
: SSeqMapSelector
- x_HasMatches()
: CObjectIndex
- x_HasNoThreads()
: CThreadPool_Impl
- x_HasOperon()
: CBioseqContext
- x_HasParts()
: CBioseqContext
- x_HasProject()
: CProjectViewBase
- x_HasQual()
: CFeatureItem
- x_HasResizableColumn()
: CAlnMultiHeaderHandler
- x_HasSNP_annot_Info()
: CSeq_annot_Info
- x_HasSourceFeats()
: CDeflineGenerator
- x_HasWorkspace()
: CGBenchGUI
- x_HaveGiList()
: CSeqDBVol
- x_HaveIdFilter()
: CSeqDBVol
- x_HaveMixedSeqTypes()
: CSeq_align_Mapper_Base
- x_HaveNegativeList()
: CSeqDBVol
- x_HaveSequence()
: CWriteDB_Impl
- x_HideNodes()
: CDockLayoutTree
- x_HidePopup()
: CMessageSlot
- x_HideShowInputs()
: CBLASTSearchParamsPanel
- x_HistoryComments()
: CFlatGatherer
- x_HitBoundary()
: CCgiEntryReader
- x_HitIconTest()
: CLayoutTrack
- x_HitRangeBorder()
: CAlignMarkHandler
- x_HitSelectedLine()
: CAlignMarkHandler
- x_HitTest()
: CTTWindow, CSplitter, CDockContainer, CTextSelHandler, CLinearSelHandler, CAlnMultiHeaderHandler, CAlignMarkHandler
- x_HitTestButton()
: CAlnVecRow
- x_HitTestItemBox()
: CSurveyBrowser
- x_HitTestSeparator()
: CSplitter
- x_HitTitleBar()
: CLayoutTrack
- x_HonorStandardSettings()
: CNcbiApplication
- x_HorzMoveSelectionBy()
: CMapControl
- x_Hour()
: CTimeSpan
- x_HTGSComments()
: CFlatGatherer
- x_HungerSemPred()
: CBlockingQueue< TRequest >
- x_IdComments()
: CFlatGatherer
- x_Identical()
: CCleanup_imp
- x_IdenticalModifierLists()
: CCleanup_imp
- x_IdentifyAlnMixSeq()
: CAlnMixSequences
- x_IdentifyPotentialAnchors()
: CAlnStats< _TAlnIdVec >
- x_IdentToOid()
: CSeqDBIsam
- x_Idle()
: CThreadPool_ServiceThread, CThreadPool_ThreadImpl
- x_IdsToBitSet()
: CSeqDBOIDList
- x_IdToStrKey()
: CSeq_id_PDB_Tree
- x_IdXrefsAreReciprocal()
: CValidError_bioseq
- x_IdXrefsNotReciprocal()
: CValidError_bioseq
- x_ImpFeatToCdRegion()
: CCleanup_imp
- x_ImportQuals()
: CFeatureItem
- x_Inapplicable_Method()
: CVariant
- x_IncludesMinus()
: CHandleRange
- x_IncludesPlus()
: CHandleRange
- x_IncSeg()
: CSeqVector_CI
- x_Indent()
: CTextItem
- x_IndentLine()
: CDebugDumpFormatterText
- x_IndexAnnotTSE()
: CTSE_Info, CDataSource
- x_IndexAnnotTSEs()
: CDataSource
- x_IndexBioseq()
: CTSE_Info, CTSE_ScopeInfo
- x_IndexBioseq_set()
: CTSE_Info
- x_IndexSeqTSE()
: CTSE_Info, CDataSource
- x_IndexTSE()
: CDataSource_ScopeInfo, CDataSource
- x_Info()
: CDebugDumpViewer, CGFFReader, CGff3Reader
- x_Init()
: CThreadPool_Impl, CChangeSeqFeatCommand, CMemStore, oligofar::CColorTwoBase, oligofar::CNcbipnaBase, CCgiTunnel2Grid, CCgi2RCgiApp, CGuideTreeCalc, CGuideTree, CMassArray, CSequenceDataTester, CString2Args, CThreadPool_Task, CTar, CReferenceItem, CBioseqContext, CAlnMix, CAlnMap, CAnnotTypes_CI, CSeq_id, CSiteList, CBondList, CFeatList, CSeq_align_Mapper_Base, CwxTableListCtrl, CSplitter, CMapItem, CMapControl, CTaxTreeDS_ObjMgr, CFeatureTypesBrowser, CSimpleScoringMethod, CQualityScoringMethod, CAlignDataSource, CAnnotCompare_AlignDS, CAlnSpanVertModel, CAlignedFeatureGraph, CGlDisplayList, CSelectionEvent, CDataMiningPanel, CSQLITE_Blob, CTempString, CTimeSpan, CTime, CTlsBase, CNcbiRegistry, CFileLock, CException, CDll, CDiagCollectGuard, CSafeStaticRef< T >, CSafeStaticPtr< T >, CAutoInitRef< T >, CAutoInitPtr< T >, CStringOrBlobStorageReader, CStringOrBlobStorageWriter, CCgiRequest, CCgiUserAgent, CCgiException, CMultiAligner, SDataLoaderConfig, CBlastTracebackSearch, CRemoteBlast, CBlastPrelimSearch, CSearchResultSet, CBl2Seq, CCompartmentAccessor< THit >, CSplignFormatter
- x_Init_wxApplication()
: CNCBIwxApplication
- x_InitAlign()
: CSeq_loc_Mapper_Base
- x_InitAlignDS()
: CGuideTreeCalc
- x_InitAligner()
: CMultiAligner
- x_InitAlignKeys()
: CSeq_annot_Info
- x_InitAlignList()
: CSeq_annot_Info
- x_InitAnnotKeys()
: CSeq_annot_Info
- x_InitAnnotList()
: CwxAnnotConfigDlg, CSeq_annot_Info, CAnnotConfigDlg
- x_InitAppData()
: CBlastHitMatrixCGIApplication
- x_InitAppJobDispatcher()
: CDemoTableCtrlApp, CDemoApp, CDemoFeatTableApp, CDemoAlignTableApp, CFrameworkDemoApp, CGBenchApp, CwxNCBIApp
- x_InitApplicationData()
: CBlastDBCmdApp
- x_InitBasic()
: CElementaryMatching
- x_InitBioseq_Info()
: CScope_Impl
- x_InitBitmaps()
: CDockMarkerWindow
- x_InitBlastDatabaseDataLoader()
: TestUtil::CBlastOM, CBlastScopeSource
- x_InitBlastDb()
: CBlastDbMetadata
- x_InitCDB()
: CDB_Exception
- x_InitColorspace()
: oligofar::CQuery
- x_InitColumn()
: CMultiAligner
- x_InitCommonParserVars()
: CNcbiTestApplication
- x_InitConnection()
: CId2FetchApp, CId2Reader
- x_InitCurrentWidget()
: CSelectionPanel, CDataMiningPanel
- x_InitData()
: SDiagMessage
- x_InitDatabases()
: CNetBLASTUIDataSource
- x_InitDataSourceTypes()
: CUIDataSourceService
- x_InitDBsInParams()
: CBLASTToolManagerBase
- x_InitDefaultDataSources()
: CUIDataSourceService
- x_InitDefline()
: CShowBlastDefline
- x_InitDeflineTable()
: CShowBlastDefline
- x_InitDeltaMap()
: CAlignMarkHandler
- x_InitErrCode()
: CObjectException, CException
- x_InitFeatDataInfo()
: CSeqFeatData
- x_InitFeatKeys()
: CSeq_annot_Info
- x_InitFeatList()
: CSeq_annot_Info
- x_InitFeatTable()
: CSeq_annot_Info
- x_InitFeatTableKeys()
: CSeq_annot_Info
- x_InitFeatTypes()
: CFeatureCreateDialog
- x_InitFeature_Recursive()
: CGeneModelTrack
- x_InitFilePools()
: CNCBlobStorage
- x_InitFilteringVector()
: CElementaryMatching
- x_InitFsaTable()
: CTrans_table
- x_InitFsaTransl()
: CTrans_table
- x_InitGBenchService()
: CGBenchApplication
- x_InitGenbankDataLoader()
: TestUtil::CBlastOM, CBlastScopeSource
- x_InitGeneticCodesCombo()
: CBLASTSearchParamsPanel
- x_InitGraphKeys()
: CSeq_annot_Info
- x_InitGraphList()
: CSeq_annot_Info
- x_InitGuiRegistry()
: CGBenchFeedbackAgent, CGBenchApp, CwxNCBIApp
- x_InitHTMLActiveArea()
: CSeqGlyph
- x_Initialize()
: CNCMMCentral, CLoadLockBlob_ids, CSeq_entry_I, CSeq_entry_CI, CSeq_annot_CI, CTSE_Info, CAnnot_Collector, CBioseq_CI, CAnnot_CI, CScoreBuilder
- x_Initialize0()
: CAnnot_Collector
- x_InitializeAlign()
: CSeq_loc_Mapper_Base
- x_InitializeAnnotTypesSet()
: SAnnotSelector
- x_InitializeBioseq()
: CSeq_loc_Mapper
- x_InitializeCache()
: CSeqVector_CI
- x_InitializeFeat()
: CSeq_loc_Mapper_Base
- x_InitializeLocs()
: CSeq_loc_Mapper_Base
- x_InitializeQueryInfo()
: CPssmEngine
- x_InitializeScoreBlock()
: CPssmEngine
- x_InitializeSeqMap()
: CSeq_loc_Mapper
- x_InitImplementation()
: CFeature_table_reader, CGen_code_table
- x_InitIndexTables()
: CAnnotType_Index
- x_InitInputReader()
: CBlastFastaInputSource
- x_InitInsertColumn()
: CMultiAligner
- x_InitInstance()
: CNCMMReserve
- x_InitItemProperties()
: CMapControl
- x_InitIterator()
: CSparse_CI, CSparseIterator
- x_InitLDS()
: CSampleLdsApplication
- x_InitLoadManagers()
: CUIDataSourceService
- x_InitLock()
: CNCBlobLockHolder
- x_InitLocsKeys()
: CSeq_annot_Info
- x_InitLocsList()
: CSeq_annot_Info
- x_InitMainFrame()
: CWorkbench
- x_InitMenuResources()
: CSnpTableView, CFeatTableView, CAlignSpanView
- x_InitMinitoringStage()
: CBlastSearchTask
- x_InitNcbi4naTables()
: oligofar::CScoreTbl
- x_InitNcbi8na()
: oligofar::CQuery
- x_InitNcbipna()
: oligofar::CQuery
- x_InitNcbiqna()
: oligofar::CQuery
- x_InitNucProtBitmaps()
: CSeqIdAlignBitmap< TSeqAlignSeqIdVec >
- x_InitObjectIndexList()
: CTSE_Chunk_Info
- x_InitObjectManager()
: CBlastHitMatrix
- x_InitOtherFeatList()
: CFeaturePanel
- x_InitPackages()
: CGBenchApplication
- x_InitParams()
: CMultiAlignerOptions, CMultiAligner
- x_InitParticipationVector()
: CElementaryMatching
- x_InitPattern()
: CBoyerMooreMatcher
- x_InitPort()
: CBlastHitMatrix
- x_InitPrefetch()
: CPrefetchTokenOld_Impl
- x_InitProbTbl()
: oligofar::CScoreTbl
- x_InitProc()
: CReferenceItem
- x_InitProjectParams()
: CMergeAlignmentsToolManager, CGroupAlignmentsToolManager, CAlgoToolManagerBase
- x_InitPubSeqConnection()
: CId2FetchApp
- x_InitQueries()
: CRemoteBlast
- x_InitRandomizer()
: CSeqVector_CI, CSeqVector
- x_InitScoreForPhrap()
: oligofar::CScoreParam
- x_InitScoretbl()
: oligofar::CScoreTbl
- x_InitSearch()
: CSeqDBIsam
- x_InitSeg()
: CSeqVector_CI
- x_InitSegment()
: CSparse_CI, CSparseIterator
- x_InitSeqDB()
: CLocalDbAdapter
- x_InitSequenceType()
: CSeqVector
- x_InitSession()
: CCgiContext
- x_InitSparse()
: CSeq_loc_Mapper_Base
- x_InitSpliced()
: CSeq_loc_Mapper_Base
- x_InitStaticTables()
: oligofar::CPermutator8b
- x_InitStorage()
: CCgiSampleApplication
- x_InitSubject()
: CPsiBl2Seq
- x_InitSubjIdentityTable()
: oligofar::CScoreParam
- x_InitTable()
: CwxChooseSeqDlg
- x_InitTexObj()
: CGlTexture
- x_InitTrackManager()
: CFeaturePanel
- x_InitTree()
: CExtraFeaturePanel, CFeatureCheckPanel
- x_InitTreeFeatures()
: CGuideTreeCalc
- x_InitTreeLabels()
: CGuideTree
- x_InitWidget()
: CDotMatrixView, CAnnotCompareView, CAlignSpanView
- x_InitWithDummyData()
: CPhyloTreeCGIApplication
- x_InitWithRealData()
: CPhyloTreeCGIApplication
- x_InNB()
: CBaseTextOStream, CStyledTextOStream
- x_InsertBlock()
: CMemStore
- x_InsertElement()
: CCache< TKey, TValue, THandler, TLock, TSize >
- x_InsertInUnnamedGroup()
: CMenuItem
- x_InsertItem()
: CSelectionControl, CSelListModelImpl< Item >, CAlnMultiModel
- x_InsertItems()
: CSelectionControl
- x_InsertPageBreak()
: CDebugDumpFormatterText
- x_InsertProjectHandle()
: CWorkspacePrx
- x_InsertSeg()
: CSeq_align_Mapper_Base
- x_Instance()
: CBV_PoolBlockAlloc< BA, Lock >, CInitRegistrar
- x_InstantiateNode()
: CDockContainer
- x_InstantiateNode_AddChildWindows()
: CDockContainer
- x_InternalUnlockTSE()
: CTSE_ScopeInfo_Base
- x_InterruptTask()
: CTaskProgressReporter
- x_Intersecting()
: CTranslationGlyph
- x_IntersectingStrands()
: CHandleRange
- x_Intersects()
: CRangeCollection< Position >
- x_IntersectWith()
: CRangeCollection< Position >
- x_InvalidateCache()
: CSeq_loc
- x_InvalidateRows()
: CAlnMultiRenderer
- x_InvalidateScores()
: CSeq_align_Mapper_Base
- x_InvertSingleItem()
: CSelectionControl
- x_IsActiveFin()
: CValidError_bioseq
- x_IsAllowedStrands()
: CContigAssembly
- x_IsAllowMismatch()
: CSeqSearch
- x_IsAmbig()
: CFindRSites
- x_IsAnyContentType()
: CClassTypeStrings
- x_IsArtificial()
: CValidError_bioseq
- x_IsAutoShutdownTime()
: CWorkerNodeIdleThread
- x_IsBetter()
: CDataSource_ScopeInfo, CSeq_id_Mapper
- x_IsBioSourceEmpty()
: CCleanup_imp
- x_IsBlobExistsInCache()
: CNCBlobStorage
- x_IsChanged()
: CSeqMap
- x_IsChromosome()
: CFeaturePanel
- x_IsCitSubPub()
: CCleanup_imp
- x_IsColoringEnabled()
: CHitMatrixGraph
- x_IsCommentLine()
: CWiggleReader, CGff3Reader
- x_IsDeltaLitOnly()
: CValidError_bioseq, CBioseqContext
- x_IsDescrSameForAllInPartsSet()
: CCleanup_imp
- x_IsDragging()
: CSplitter, CDockManager
- x_IsElastic()
: CDockContainer
- x_IsEmpty()
: CNcbiResourceInfo
- x_IsEndDesc()
: CSeq_entry_Info, CBioseq_Base_Info
- x_IsEndNextDesc()
: CBioseq_Base_Info
- x_IsExcluded()
: CSeq_annot_ftable_I, CSeq_annot_ftable_CI
- x_IsExpandPattern()
: CSeqSearch
- x_IsFeatureSuppressed()
: CAutoDef
- x_IsFilterSelected()
: CSnpFilterListDialog
- x_IsFiniteState()
: CAppTask
- x_IsFlagSet()
: CNCMessageHandler
- x_IsGeneInfoAvailable()
: CDisplaySeqalign
- x_IsGuarded()
: CSyncQueue< Type, Container >
- x_IsInGPS()
: CBioseqContext
- x_IsInNucProt()
: CBioseqContext
- x_IsInsert()
: CSparse_CI, CSparseIterator
- x_IsIsland()
: CCpGIslands
- x_IsItemSelected()
: CSelListModelImpl< Item >, CAlnMultiModel
- x_IsJobComplete()
: CTrackCreatorUI
- x_IsJobNeeded()
: CDataTrack, CSnpTrack, CLDBlockTrack, CHapmapTrack, CGapTrack, CBinsTrack
- x_IsJobRunning()
: CScoreCache, CSparseMultiDataSource, CAlnVecMultiDataSource
- x_IsJustTopStrand()
: CSeqSearch
- x_IsLinear()
: CAlnMultiDSBuilder
- x_IsLineUcscMetaInformation()
: CGFFReader
- x_IsMasterLineByWindowY()
: CAlnMultiPane
- x_IsMatch()
: CElementaryMatching
- x_IsMergeableBioSource()
: CCleanup_imp
- x_IsMicroRNA()
: CValidError_bioseq
- x_IsMinusStrand()
: CSeq_point, CSeq_interval, CPacked_seqpnt
- x_IsMonitored()
: CNCBlobStorage, CNCMessageHandler
- x_IsMultiArg()
: CArgDescriptions
- x_IsNewTaskAllowed()
: CThreadPool_Impl
- x_IsNucInput()
: CBLASTToolManagerBase
- x_IsNullType()
: CClassTypeStrings, CChoiceTypeStrings
- x_IsNullWithAttlist()
: CClassTypeStrings, CChoiceTypeStrings
- x_IsOrgModRequired()
: CAutoDef
- x_IsOverviewMode()
: CSnpTrack, CLDBlockTrack, CHapmapTrack, CGapTrack, CBinsTrack
- x_IsPart()
: CBioseqContext
- x_IsPatchNeeded()
: CDataLoaderPatcher
- x_IsPolyA()
: CAlignGlyph
- x_IsPopupShown()
: CMessageSlot
- x_IsProtein()
: CSequenceDataTester
- x_IsPseudo()
: CAutoDefFeatureClause
- x_IsPWAlign()
: CAlignGlyph
- x_IsQueryHalf()
: CCrossAlnPane
- x_IsRangeGap()
: CValidError_bioseq
- x_IsReallyInLRU()
: CNCMMDBPage
- x_IsRestrictionSet()
: CNetSchedule_AccessList
- x_IsRoot()
: CPhyloTreeNodeGroupper
- x_IsSameSeqAnnotDesc()
: CValidError_bioseq
- x_IsSavedName()
: CDataType
- x_IsScoringJobRunning()
: CSGAlignmentDS
- x_IsSeqLettersFit1()
: CCrossPanelIR
- x_IsSeqLettersFit2()
: CCrossPanelIR
- x_IsSet()
: CSeqDBOIDList
- x_IsSetDescr()
: CBioseq_set_Info, CBioseq_Info, CBioseq_Base_Info
- x_IsSetOldFormat()
: SDiagMessage
- x_IsSetProp()
: CRequestContext
- x_IsSpecial()
: CRPCClient< TRequest, TReply >
- x_IsSpliceSite()
: CSeqTextDataSource
- x_IsStdStatic()
: CSafeStaticPtr_Base
- x_IsStdXml()
: CObjectOStreamXml, CObjectIStreamXml
- x_IsStreamOk()
: CNetCacheWriter
- x_IsSubSrcRequired()
: CAutoDef
- x_IsSuitableForPartialFetching()
: CBlastTracebackSearch
- x_IsUnicodeClientAPI()
: CTL_BCPInCmd
- x_IsUnique()
: CAlignFilter
- x_IsUnknownRID()
: CRemoteBlast
- x_IsUpdatesLocked()
: CMapControl
- x_IsValid()
: CGwasTrackLoadManager, CAnnot_CI, CSeq_loc_CI
- x_IsValidChunk()
: CAlnVecIterator
- x_IsValidMolType()
: CBioseq_CI
- x_IterateExonParts()
: CSeq_loc_Mapper_Base
- x_IterateSeqAlignList()
: CAppHitFilter
- x_JobStopRequested()
: CGridCgiApplication
- x_Join()
: CRegexpUtil
- x_Journal()
: CGenbankFormatter
- x_KillNode()
: CWNJobsWatcher
- x_KindOfHuge()
: IPhyloTreeRenderer
- x_LastIntervalChangeBeforeEnd()
: CAutoDefFeatureClause_Base
- x_LaunchJob()
: CSGGenBankDS
- x_LaunchMultiThreadedSearch()
: CBlastPrelimSearch
- x_LaunchProjectLoadingTask()
: CProjectTask
- x_LaunchTask()
: CProjectCmdHandler, CAppExplorerCmdHandler
- x_LayerByPos()
: CLayeredLayout
- x_LayerBySize()
: CLayeredLayout
- x_Layout()
: CPhyloSlantedCladogram, IPhyloTreeRenderer, CPhyloRectCladogram, CPhyloRadial, CPhyloTreePane, CPhyloForce, CAlignedFeatureGraph, CAlnMultiRenderer
- x_LayoutColumns()
: CAlnMultiRenderer
- x_LayoutLabels()
: CAxisRenderer
- x_Left()
: oligofar::CSpacialRanges
- x_length()
: CTempXStr< _TChar >
- x_Less()
: CTempString
- x_Lim2Seq1()
: CCrossPanelIR
- x_Lim2Seq2()
: CCrossPanelIR
- x_LimitCollapsedSelection()
: CExpandItem
- x_LinkChildFolders()
: CGBWorkspace, CGBProjectHandle
- x_LinkedLayout()
: CAlignedFeatureGraph
- x_ListIncludesId()
: CSeqDBVol
- x_Load()
: CTestConfigMediator, CLDBlockJob, CHapmapJob, CGapJob, CBinsJob, CNSJobInfo, CTextPanel, CThemeMediator, CMetaRegistry, CCgiSession
- x_LoadAGP()
: CFileLoader
- x_LoadAlignedSeqFeats()
: CAlignmentTrack
- x_LoadAlignmentFeats()
: CSGAlignmentJob
- x_LoadAlignments()
: CSGAlignmentJob
- x_LoadAlignmentSettings()
: CAlignmentTrack
- x_LoadAlignSmearSettings()
: CAlignmentTrack
- x_LoadAnnot()
: CTSE_Split_Info, CTSE_Chunk_Info
- x_LoadASN()
: CTextPanel
- x_LoadAsnBinary()
: CFileLoader
- x_LoadAsnTextOrXml()
: CFileLoader
- x_LoadAssembly()
: CTSE_Split_Info, CTSE_Chunk_Info
- x_LoadBioseq()
: CTSE_Split_Info, CTSE_Chunk_Info
- x_LoadBlastDbDataLoaderConfig()
: SDataLoaderConfig
- x_LoadBlockBoundaries()
: CMultiAligner
- x_LoadCHPA()
: CGapJob
- x_LoadChunk()
: CTSE_Split_Info, CTSE_Info_Object, CTSE_Info
- x_LoadChunks()
: CTSE_Split_Info, CTSE_Info_Object, CTSE_Info
- x_LoadConstraints()
: CAppHitFilter
- x_LoadData()
: CSplitDataLoader, CBlastDbDataLoader, CProjectPrx
- x_LoadDataLoadersConfig()
: SDataLoaderConfig
- x_LoadDescr()
: CTSE_Split_Info, CTSE_Chunk_Info
- x_LoadFasta()
: CFileLoader
- x_LoadFastA()
: CTextPanel
- x_LoadFastXML()
: CTextPanel
- x_LoadFeatProducts()
: CSGFeatureJob
- x_LoadFeatSettings()
: CSeqGraphicConfig
- x_LoadFeatures()
: CSelectFeatureDlg, CGeneModelFeatJob, CSGFeatureJob
- x_LoadFeatureTypes()
: CSeqTextJob
- x_LoadFile()
: CFileLoader
- x_LoadFilter()
: CSnpFilterUI
- x_LoadFirst()
: CThemeMediator
- x_LoadFlatFile()
: CTextPanel
- x_LoadFrameContainer()
: CDockManager
- x_LoadFromRegistry()
: CSnpFilterUI
- x_LoadFtable()
: CLDBlockJob
- x_LoadGeneralData()
: CGBProjectTool
- x_LoadGFF()
: CGffLoadTask
- x_LoadGff()
: CFileLoader
- x_LoadGffData()
: CGBProjectTool
- x_LoadGWAS()
: CGapJob
- x_LoadHistSettings()
: CSeqGraphicConfig
- x_LoadIDs()
: CAppHitFilter
- x_LoadItem()
: CODBC_RowResult
- x_LoadJobDescriptors()
: CNetBLASTUIDataSource
- x_LoadLenFa()
: CAgpValidateApplication
- x_LoadLong()
: CWigBufferedLineReader, CBufferedLineReader
- x_LoadMatePairSettings()
: CAlignmentTrack
- x_LoadMessages()
: CDiagConsolePanel
- x_LoadMPPWAlignSettings()
: CAlignmentTrack
- x_LoadMultiAlignSettings()
: CAlignmentTrack
- x_LoadObject()
: CSeqMap
- x_LoadPackage()
: CPkgManager
- x_LoadPage()
: CSeqDBIsam
- x_LoadPkgList()
: CAppPackagesDlg
- x_LoadProfile_Recursive()
: CFeaturePanel
- x_LoadProjects()
: CProjectTask
- x_LoadPWAlignSettings()
: CAlignmentTrack
- x_LoadRemapData()
: CElementaryMatching
- x_LoadRepeatMasker()
: CFileLoader
- x_LoadSeq_entry()
: CTSE_Split_Info, CTSE_Chunk_Info
- x_LoadSeq_idBlob_idsSet()
: CId2ReaderBase
- x_LoadSeqIds()
: oligofar::CBatch
- x_LoadSeqLoc()
: CLocationPanel
- x_LoadSequence()
: CTSE_Split_Info, CTSE_Chunk_Info, CSplign
- x_LoadSettings()
: CwxSeqTextViewOptions, CSequenceSearchForm, COrfSearchForm, CFeatureSearchForm, CEntrezSearchForm, CCpgSearchForm, CDialog, CSixFramesTransTrack, CSequenceTrack, CSegmentMapTrack, CLayoutTrack, CGraphTrack, CGeneModelTrack, CFeatureTrack, CFeaturePanel, CEpigenomicsTrack, CAlignmentTrack, CwxChooseSeqDlg, CSnpTrack, CHapmapTrack, CGapTrack, CBinsTrack, CNetBLAST_DMSearchForm, CSearchFormBase, CRunToolDlg, CProjectSelectorDlg, COpenViewDlg
- x_LoadTemplate()
: CHTMLPage
- x_LoadTemplateLib()
: CHTMLPage
- x_LoadTemplateTool()
: CUIToolRegistry
- x_LoadTempTrackRecursive()
: CFeaturePanel
- x_LoadTools()
: CScoreMethodsDlg
- x_LoadTrackSettingsRecursive()
: CFeaturePanel
- x_LoadTSE()
: CLDS_DataLoader
- x_LoadUnloadProject()
: CProjectTreePanel, CProjectCmdHandler
- x_LoadViewSettings()
: CViewManagerService
- x_LoadWidgetValues()
: CwxAnnotConfigDlg, CAnnotConfigDlg
- x_LoadWindowLayout()
: CGBenchGUI
- x_LoadWorkspace()
: CProjectService
- x_Local2World()
: CSeqGlyph
- x_Lock()
: CSyncQueue< Type, Container >, CTSE_Lock
- x_lock
: BlastHSPStream
- x_LockAndValidate()
: CNCBlobLockHolder
- x_LockAndWait()
: CSyncQueue< Type, Container >
- x_LockAndWaitWhileEmpty()
: CSyncQueue< Type, Container >
- x_LockAndWaitWhileFull()
: CSyncQueue< Type, Container >
- x_LockInstanceGuard()
: CNCBlobStorage
- x_LockMatchSet()
: CScope_Impl
- x_LockTSE()
: CTSE_ScopeInfo_Base, CDataSource
- x_Locs_AddFeatSubtype()
: CAnnotObject_Info
- x_Log()
: CSQLITE3_Statement, CPipeProcessWatcher
- x_LogCompartmentStatus()
: CSplignApp
- x_LogIfError()
: CConn_Streambuf
- x_LogTask()
: CAppTaskService
- x_LookAtArgs()
: CCgiSampleApplication
- x_LookupFile()
: CSeqDBAtlas
- x_MainLoop()
: oligofar::CSeqScanner
- x_MakeAlias()
: CWriteDB_Impl
- x_MakeAliasName()
: CWriteDB_Impl
- x_MakeChanges()
: CEditAppJob, CAutodefJob
- x_MakeChromId()
: CWig2tableApplication
- x_MakeClusterResidueFrequencies()
: CMultiAligner
- x_MakeContentMask()
: CGBDataLoader
- x_MakeFileName()
: CWriteDB_File
- x_MakeFilenames()
: CSeqDBIsam
- x_MakeFillerBlocks()
: CMultiAligner
- x_MakeFreeTDSVersion()
: CODBC_Connection
- x_MakeFromString()
: CDB_Numeric
- x_MakeGetAnswer()
: CNetScheduleHandler
- x_MakeHandle()
: CTSE_Handle
- x_MakeHandles()
: CTSE_Handle
- x_MakeItem()
: CODBC_RowResult
- x_MakeLocalQueryData()
: IQueryFactory, CObjMgrFree_QueryFactory, CObjMgr_QueryFactory
- x_MakeLogMessage()
: CNetScheduleHandler
- x_MakeMolinfoDesc()
: CPromote
- x_MakeNewBioseq()
: CPromote
- x_MakeNewProtein()
: CPromote
- x_MakeNewRna()
: CPromote
- x_MakeObjName()
: CDBL_ITDescriptor
- x_MakePortMatchScrollValue()
: CSeqTextWidget
- x_MakeRemoteQueryData()
: IQueryFactory, CObjMgrFree_QueryFactory, CObjMgr_QueryFactory
- x_MakeStream()
: CTracebackTestFixture
- x_MakeString()
: CWString
- x_MakeUniqueItemName()
: CProjectPrx
- x_MakeUniqueStyleKey()
: CSettingsSet
- x_MakeUniqueStyleName()
: CSettingsSet
- x_MakeUTF8String()
: CWString
- x_MakeVisible()
: CSelectionControl, CMapControl
- x_MakeVisibleHorz()
: CAlnMultiWidget
- x_ManageCmdPipeline()
: CNCMessageHandler
- x_Map()
: CSeq_annot_Info, CDataSource
- x_Map_PackedInt_Element()
: CSeq_loc_Mapper_Base
- x_Map_PackedPnt_Element()
: CSeq_loc_Mapper_Base
- x_MapAnnotObject()
: CTSE_Info, CSeq_annot_Info
- x_MapChunkByFeatId()
: CTSE_Info
- x_MapChunkByFeatType()
: CTSE_Info
- x_MapDataPage()
: CSeqDBIsam
- x_MapFeatByGene()
: CSeq_annot_Info
- x_MapFeatById()
: CTSE_Info, CSeq_annot_Info
- x_MapFeatByLocus()
: CTSE_Info
- x_MapFeatIds()
: CSeq_annot_Info
- x_MapInterval()
: CSeq_loc_Mapper_Base
- x_MaplocComments()
: CFlatGatherer
- x_MapMask()
: CFastaOstream
- x_MapMemFiles()
: CGeneInfoFileReader
- x_MapNextRange()
: CSeq_loc_Mapper_Base
- x_MapPairToParam()
: CDB_ODBC_ConnParams
- x_MapSeq_align()
: CSeq_loc_Mapper_Base
- x_MapSeq_loc()
: CSeq_loc_Mapper_Base
- x_MapSNP_Table()
: CTSE_Info
- x_MarkChainFree()
: CNCMMReserve
- x_MarkCollapsedQueryNode()
: CGuideTree
- x_MarkItemForErase()
: CSelListModelImpl< Item >, CAlnMultiModel
- x_MarkListIfEmpty()
: CNCMMReserve
- x_MarkState()
: CAlignMarkHandler
- x_Mask()
: oligofar::CBitHacks
- x_MaskSequence()
: CWriteDB_Impl
- x_Match()
: CSequenceSearchJob, CFeatureSearchJob, CDiagStrErrCodeMatcher, CSeq_id_Mapper, CFeatureSearchJob, CAlignFilter
- x_Matches()
: CReferenceItem
- x_MatchGene()
: CAutoDefFeatureClause
- x_MatchLimitObject()
: CAnnot_Collector
- x_MatchLocIndex()
: CAnnot_Collector
- x_MatchRange()
: CAnnot_Collector
- x_MaxValueAndCount()
: CAnalysisFileLoader
- x_MayAcquireForReading()
: CRWLock
- x_MeasureItem()
: CMinPanelContainer
- x_MeasureTree()
: CPhyloTreeDataSource
- x_Medline()
: CGenbankFormatter
- x_MeetAltSpliceRules()
: CAutoDefFeatureClause_Base
- x_MeetsEvalueRequirements()
: CSeqAlignCmp
- x_Merge()
: CCleanup_imp, CAlnMixMerger
- x_MergeAdjacentAnnots()
: CCleanup_imp
- x_MergeAlignments()
: CMergeAligner
- x_MergeAndMovePubs()
: CCleanup_imp
- x_MergeAttributes()
: CGFFReader
- x_MergeCandidates()
: CMergeVolumes
- x_MergeChain()
: CNCMMReserve
- x_MergeChainIfValid()
: CNCMMReserve
- x_MergeCitSubs()
: CCleanup_imp
- x_MergeDifferentSeq()
: CAlnGraphic
- x_MergeDuplicateBioSources()
: CCleanup_imp
- x_MergeDuplicatePubs()
: CCleanup_imp
- x_MergeEqualBioSources()
: CFlatGatherer
- x_MergeInclusiveSeqalign()
: CVecscreen
- x_MergeItems()
: CMenuItem
- x_MergeLowerRankSeqalign()
: CVecscreen
- x_MergeMultipleDates()
: CCleanup_imp
- x_MergeObjects()
: CViewGraphic, CFeatTableView, CSeqTextView, CMultiAlignView
- x_MergeRecords()
: CGFFReader
- x_MergeSameSeq()
: CAlnGraphic
- x_MergeSeqalign()
: CVecscreen
- x_MergeSeqSegments()
: CSGSegmentMapJob
- x_MergeSite()
: CGuiRegistry
- x_MergeVolume()
: CMergeVolumes
- x_MinimizeGaps()
: CAlnMixSegments
- x_MinimizePub()
: CCleanup_imp
- x_Minute()
: CTimeSpan
- x_MkFlags()
: oligofar::CReaderFactory
- x_Modified()
: CCompoundRWRegistry, CTwoLayerRegistry, CCompoundRegistry, CMemoryRegistry, IRegistry, CEnvironmentRegistry
- x_ModifyItems()
: CProjectServiceTestJob
- x_ModifyState()
: CwxTreeCtrlEx
- x_ModToOrgMod()
: CCleanup_imp
- x_MonitorError()
: CNCBlobStorage
- x_MonitorJob()
: CNetScheduleHandler
- x_MonitorPost()
: CNCBlobStorage, CNCMessageHandler
- x_MouseInRightMargin()
: CTextSelHandler
- x_MouseToSeqPos()
: CTextSelHandler, CLinearSelHandler, CAlignMarkHandler
- x_Move()
: CSeqMap_CI_SegmentInfo, CLayoutTrackHandler
- x_MoveBlobInCache()
: CNCBlobStorage
- x_MoveCodingRegionsToNucProtSets()
: CCleanup_imp
- x_MoveColumn()
: CAlnMultiHeaderHandler
- x_MoveColumnSeparator()
: CAlnMultiHeaderHandler
- x_MoveDbxrefs()
: CCleanup_imp
- x_MoveDescriptor()
: CCleanup_imp
- x_MoveDragFrame()
: CDockManager
- x_MoveFeaturesOnPartsToCorrectSeqAnnots()
: CCleanup_imp
- x_MoveGeneQuals()
: CCleanup_imp
- x_MoveIdenticalPartDescriptorsToSegSet()
: CCleanup_imp
- x_MoveMapQualsToGeneMaploc()
: CCleanup_imp
- x_MoveProjectFolder()
: CAppExplorerService
- x_MoveSelectionBy()
: CSelectionControl, CSelListController< Item >
- x_MoveSelLineByPage()
: CSelListController< Item >
- x_MoveSeparator()
: CSplitter
- x_MoveToFloatingFrame()
: CDockManager
- x_MoveTrackDownRecursive()
: CLayoutTrackHandler
- x_MoveTrackUpRecursive()
: CLayoutTrackHandler
- x_mRNA_CDS_ToBePlaced()
: CAlignedFeatureGraph
- x_MultiAlignClusters()
: CMultiAligner
- x_NameComments()
: CFlatGatherer
- x_NameHasBadChars()
: CLocusItem
- x_Ncbipna2Ncbi4na
: oligofar::CQueryHash
- x_Ncbiqna2Ncbi4na
: oligofar::CQueryHash
- x_NeedAdjustTime()
: CTime
- x_NeedModule()
: CDiagCompileInfo
- x_NeedSNPs()
: CAnnot_Collector
- x_NeedsTrans()
: CBlastQueryFilteredFrames
- x_NeedToRefreshCachedDBs()
: CNetBLASTUIDataSource
- x_NeedToShow()
: CTrackContainer
- x_NeedUpdate()
: CTSE_Info_Object
- x_NewConnection()
: CId2Reader, CId1Reader
- x_NewEmptySet()
: CNCMMSizePool
- x_NewRecord()
: CGFFReader
- x_NewSplit()
: CSplitter
- x_NewWorkspace()
: CProjectTask
- x_NewWrite()
: SDiagMessage
- x_Next()
: CSeqdesc_CI, CSeqMap_CI, CSeq_descr_CI, CGBUserTypeParent_CI
- x_NextBaseCallAtPosition()
: oligofar::fourplanes::CHashIterator
- x_NextCacheSeg()
: CSeqVector_CI
- x_NextChunk()
: SCigarAlignment
- x_NextDesc()
: CSeqdesc_CI
- x_NextEntry()
: CBioseq_CI
- x_NextMappingRange()
: CSeq_loc_Mapper_Base
- x_NextSubTask()
: CBlastSearchTask, CCompositeAppTask, CProjectLoadingTask
- x_NextTempPriority()
: CGuiRegistry
- x_NextVisibleColumn()
: CAlnMultiHeaderHandler
- x_NextVolume()
: CBDB_SplitCursor< BDB_SplitStore, BDB_Vol >
- x_NodeSize()
: IPhyloTreeRenderer
- x_NoMoreObjects()
: CAnnot_Collector
- x_Normalize()
: CSeqDB_BitSet, CPhyloRadial, CPhyloForce, CGlDrawScale, CTimeSpan
- x_NormalizeMolInfo()
: CCleanup_imp
- x_NormalizeType()
: CAsnElementItem
- x_NormalizeTypeName()
: CObjectConverter
- x_NormToPixels()
: CMouseZoomHandler
- x_NormToScale()
: CMouseZoomHandler, CMinimapHandler
- x_NotGreater()
: CPhyloTreeNode
- x_NotifyChange()
: CEditAppJob
- x_NotifyDataSource()
: CNetBlastJobDescriptor
- x_NotifyFolderChange()
: CEditAppJob
- x_NotifyJobWatcher()
: CGridWorkerNode
- x_NotifyObservers()
: CAppJobEventTranslator, CObservable
- x_NotifyObserversNow()
: CObservable
- x_NotifyWidgetRangeChanged()
: CSeqGraphicPane, CAlnSpanWidget
- x_NotifyWidgetSelChanged()
: CSeqGraphicPane, CAlnSpanWidget
- x_npos()
: CTempXStr< _TChar >
- x_NumericSearch()
: CSeqDBIsam
- x_Object()
: CXmlRetrieveJob
- x_OccupyChain()
: CNCMMReserve
- x_OffsetToInfo()
: CGeneInfoFileReader
- x_OidOrder()
: CSeqDBMapStrategy
- x_OkToConsolidate()
: CAutoDefFeatureClause_Base
- x_OkToConvertToDescriptor()
: CCleanup_imp
- x_OkToMerge()
: CCleanup_imp
- x_OldWrite()
: SDiagMessage
- x_OnAddFilenames()
: CMultiFileInput
- x_OnAddLevels()
: CTableSortMultiChoice
- x_OnAllJobsFinished()
: CTrackContainer, CAllOtherFeaturesTrack
- x_OnAnnotClick()
: CAnnotConfigDlg
- x_OnAppJobNotification()
: CAnnotCompareDS
- x_OnBeginDrag()
: CWindowManager
- x_OnBrowse()
: CPrintOptionsDlg, CSaveImageDlg, CPrintDlg
- x_OnBrowserChange()
: CSnpFilterUI, CSnpFilterListDialog
- x_OnBtnAdd()
: CSnpFilterUI
- x_OnBtnCopy()
: CSnpFilterUI
- x_OnBtnDelete()
: CSnpFilterUI
- x_OnBtnDone()
: CSnpFilterUI
- x_OnBtnExport()
: CSnpFilterUI
- x_OnBtnImport()
: CSnpFilterUI
- x_OnBtnRename()
: CSnpFilterUI
- x_OnBtnSave()
: CSnpFilterUI
- x_OnCancel()
: CTrackCreatorUI, CSeqTextDlg, CSeqMarkerSetDlg, CHairlineOptionsDlg, CAnnotConfigDlg, CFeatureTypesDlg, CPhyloTreeFilterDlg, CMouseZoomHandler
- x_OnCancelFiltering()
: CFilterDialog
- x_OnChangePan()
: CMouseZoomHandler, CMinimapHandler
- x_OnChangeScale()
: CMouseZoomHandler
- x_OnChangeSelRange()
: CTextSelHandler, CLinearSelHandler, CAlignMarkHandler
- x_OnChangeZoomRectPan()
: CMouseZoomHandler, CMinimapHandler
- x_OnCheckAll()
: CFeatureTypesDlg
- x_OnChoice()
: CTrackCreatorUI
- x_OnChooseFeatTypes()
: CAnnotCompareFilterDlg
- x_OnClearAll()
: CFeatureTypesDlg
- x_OnClicked()
: CFeatureTypesBrowser
- x_OnClickExpandBtn()
: CAlnVecRow
- x_OnClose()
: CConn_Streambuf
- x_OnColorIconClicked()
: CFeaturePanel
- x_OnContentIconClicked()
: CGeneModelTrack, CAlignmentTrack
- x_OnContextAction()
: CFeatTableWidget
- x_OnCopy()
: CwxTableListCtrl, CSeqTextPane, CObjectListWidget, IClipboardHandler
- x_OnCustomSize()
: CSaveImageDlg
- x_OnDatabaseSelected()
: CBLAST_DB_Dialog
- x_OnDataSourceUpdated()
: CAnnotCompareWidget
- x_OnDecoratePopupMenu()
: CProjectView
- x_OnDecorationIconClicked()
: CFeaturePanel
- x_OnDeselectAll()
: CTrackContainerEvtHandler
- x_OnDoubleClick()
: CAnnotCompareWidget
- x_OnDrag()
: CWindowManager
- x_OnEdit()
: CTrackCreatorUI, CSnpFilterListDialog
- x_OnEndAction()
: CSeqMarkHandler
- x_OnEndDrag()
: CWindowManager, CDockManager
- x_OnEndMinimap()
: CMinimapHandler
- x_OnEndPan()
: CSeqGraphicPane, CMouseZoomHandler
- x_OnEndRectSelect()
: CSeqGraphicPane
- x_OnEndScale()
: CMouseZoomHandler
- x_OnEndSelRange()
: CTextSelHandler, CLinearSelHandler, CAlignMarkHandler
- x_OnEndZoomRect()
: CMouseZoomHandler
- x_OnEvent()
: CCgiApplication
- x_OnExit()
: CThreadInPool< TRequest >
- x_OnFileExit()
: CSplineDemoUI, CGl3dDemoUI
- x_OnFolderChanged()
: CProjectPrx
- x_OnGraphContentChanged()
: CAlnVecRow
- x_OnGraphSizeChanged()
: CAlnVecRow
- x_OnIconClicked()
: CTrackContainer, CSixFramesTransTrack, CSegmentMapTrack, CLayoutTrack, CGraphTrack, CGeneModelTrack, CFeatureTrack, CFeaturePanel, CEpigenomicsTrack, CAlignmentTrack, CSnpTrack, CLDBlockTrack, CHapmapTrack, CGapTrack, CBinsTrack
- x_OnIdle()
: CFrameworkDemoApp, CGBenchApp, CwxNCBIApp
- x_OnInputTypeChanged()
: CBLASTSearchOptionsPanel
- x_OnItemChanged()
: CProjectPrx
- x_OnJobCanceled()
: CScoreCache, CSearchToolBase
- x_OnJobCompleted()
: CTrackContainer, CSixFramesTransTrack, CSegmentMapTrack, CGraphTrack, CGeneModelTrack, CFeatureTrack, CEpigenomicsTrack, CDataTrack, CAlignmentTrack, CScoreCache, CFeatureGraph, CSnpTrack, CLDBlockTrack, CHapmapTrack, CGapTrack, CBinsTrack, CSearchToolBase
- x_OnJobDescrChanged()
: CNetBLASTUIDataSource
- x_OnJobFailed()
: CDataTrack, CScoreCache, CFeatureGraph, CSnpTrack, CLDBlockTrack, CHapmapTrack, CGapTrack, CBinsTrack, CSearchToolBase
- x_OnJobNotification()
: CFeatTableDS
- x_OnJobProgress()
: CScoreCache, CSparseMultiDataSource, CAlnVecMultiDataSource
- x_OnJobProgressNotify()
: CAppJobDispatcher
- x_OnJobStarted()
: CAppJobDispatcher
- x_OnJobStateChanged()
: CAppJobDispatcher
- x_OnJobStateChangedEvent()
: CAppJobDispatcher
- x_OnJobStateChangedNotify()
: CAppJobDispatcher
- x_OnJobStatusChange()
: CSchedulerEngine
- x_OnKeyDown()
: IPhyloTreeRenderer, CSelListController< Item >
- x_OnKeyUp()
: IPhyloTreeRenderer
- x_OnLabelIconClicked()
: CFeaturePanel
- x_OnLayoutChanged()
: CSeqGlyph, CLayoutTrack
- x_OnLayoutIconClicked()
: CGeneModelTrack, CFeatureTrack, CFeaturePanel, CAlignmentTrack
- x_OnLayoutPolicyChanged()
: CFeatureTrack, CAlignmentTrack
- x_OnLeftDown()
: CSelListController< Item >
- x_OnLeftUp()
: CSelListController< Item >
- x_OnLockAcquired()
: CRWLockHolder
- x_OnLockReleased()
: CRWLockHolder
- x_OnLockValidated()
: CNCBlobLockHolder
- x_OnMotion()
: CSelListController< Item >
- x_OnMouseDrag()
: IPhyloTreeRenderer
- x_OnMouseMove()
: CTextSelHandler, IPhyloTreeRenderer
- x_OnMousePush()
: IPhyloTreeRenderer
- x_OnMouseRelease()
: IPhyloTreeRenderer
- x_OnNBEnd()
: CDrawTextOStream, CStyledTextOStream, CCalcTextPosOStream
- x_OnNBStart()
: CStyledTextOStream, CCalcTextPosOStream
- x_OnNewItem()
: CDiagConsoleList
- x_OnNoProduct()
: CFilterDialog
- x_OnOK()
: CPrintOptionsDlg, CTrackCreatorUI, CSeqTextDlg, CHairlineOptionsDlg, CAnnotConfigDlg, CFeatureTypesDlg, CPhyloTreeFilterDlg, CSaveImageDlg, CPrintDlg
- x_OnOpChange()
: CTextSelHandler, CLinearSelHandler
- x_OnOptions()
: CPrintDlg
- x_OnPan()
: CSeqGraphicPane
- x_OnPaste()
: CSeqTextPane, IClipboardHandler
- x_OnProjectChanged()
: CWorkspaceConstPrx, CProjectService, CProjectPrx, CGBDocument
- x_OnProjectFolderProperties()
: CAppExplorerService
- x_OnProjectItemProperties()
: CAppExplorerService
- x_OnProjectProperties()
: CAppExplorerService
- x_OnRequestStatusChange()
: CThreadPoolEngine
- x_OnResetAll()
: CTextSelHandler, CLinearSelHandler, CAlignMarkHandler
- x_OnResize()
: CAlnMultiWidget
- x_OnRevertSelection()
: CTrackContainerEvtHandler
- x_OnRowMouseEvent()
: CAlnMultiPane
- x_OnRowSelect()
: CAnnotCompareWidget
- x_OnScoreIconClicked()
: CAlignmentTrack
- x_OnScrollX()
: CSeqTextWidget, CGlWidgetBase
- x_OnScrollY()
: CSeqTextWidget, CGlWidgetBase
- x_OnSelectAll()
: CTrackContainerEvtHandler
- x_OnSelectCursor()
: CTextSelHandler, IPhyloTreeRenderer, CHitMatrixGraph, CMouseZoomHandler, CMinimapHandler, CLinearSelHandler, CAlnMultiHeaderHandler, CAlignMarkHandler
- x_OnSelectFile()
: CPrintDlg
- x_OnSelectFormat()
: CPrintDlg
- x_OnSelectionChanged()
: CwxChooseSeqDlg
- x_OnSelectItem()
: CGroupMapWidget
- x_OnSelectPaper()
: CPrintOptionsDlg
- x_OnSelectPrint()
: CPrintDlg
- x_OnSet()
: CSeqMarkerSetDlg
- x_OnSetSelection()
: CSnpTableView, CViewGraphic, CFeatTableView, CTextView, CSeqTextView, CPhyTreeView, CMultiAlignView, CMPCrossAlignView, CDotMatrixView, CCrossAlignView, CAnnotCompareView, CAlignSpanView, CProjectView
- x_OnSettingsIconClicked()
: CGraphTrack, CEpigenomicsTrack
- x_OnShowPopup()
: CSeqTextPane, CPhyloTreePane
- x_OnShowPopupMenu()
: CProjectView
- x_OnSignal_OnThread()
: CSchedulerEngine
- x_OnSizeIconClicked()
: CFeaturePanel
- x_OnStartSel()
: CTextSelHandler, CLinearSelHandler, CAlignMarkHandler
- x_OnStatusUpdate()
: CAppTaskService
- x_OnStep()
: CPhyloTreeNodeGroupper, IPhyloTreeFilter, CPhyloTreeSorter, CPhyloTreeRectCalculator, CPhyloTreeCalculator, IPhyloTreeVisitor
- x_OnStepDown()
: CPhyloTreeNodeGroupper, CPhyloTreeCalculator, IPhyloTreeVisitor
- x_OnStepLeft()
: CPhyloTreeNodeGroupper, CPhyloTreeCalculator, IPhyloTreeVisitor
- x_OnStepRight()
: CPhyloTreeNodeGroupper, CPhyloTreeCalculator, IPhyloTreeVisitor
- x_OnSubjInputTypeChanged()
: CBLASTSearchOptionsPanel
- x_OnTaskCanceled()
: CAppTaskService
- x_OnToggleControlPoints()
: CSplineDemoUI
- x_OnToggleGroup()
: CGroupMapWidget
- x_OnToggleLines()
: CSplineDemoUI
- x_OnTogglePoints()
: CSplineDemoUI
- x_OnToggleTrack()
: CTrackContainerEvtHandler
- x_OnToolSelected()
: CRunToolDlg
- x_OnTopObjectFound()
: CAsnLoadJob
- x_OnUpdate()
: CPhyloTreeFilterDlg
- x_OnUpdateEvent()
: CObservable
- x_OnWakeUp()
: CAppJobTask
- x_OnWakeUpSignal()
: CAppTaskService
- x_OnWidgetGotFocus()
: CTextView
- x_OnWidgetLostFocus()
: CTextView
- x_OnWidgetPositionChanged()
: CTextView
- x_OnWidgetRangeChanged()
: CProjectView
- x_OnWidgetSelChanged()
: CProjectView
- x_OnWorkspaceChanged()
: CWorkspacePrx, CProjectService
- x_OnWorkspaceFolderChanged()
: CWorkspacePrx
- x_OnWorkspaceFolderProperties()
: CAppExplorerService
- x_OnWorkspaceProperties()
: CAppExplorerService
- x_OnXRotChanged()
: CGl3dDemoUI
- x_OnYRotChanged()
: CGl3dDemoUI
- x_OnZoom()
: CMouseZoomHandler
- x_OnZRotChanged()
: CGl3dDemoUI
- x_Open()
: SourceFile, CSeqDBGiMask, CArg_OutputFile, CArg_InputFile, CTar, CBDB_RawFile, CBDB_Env, CMemoryFileMap
- x_Open_SetViewport()
: CGlPane
- x_OpenAllColumns()
: CSeqDBVol
- x_OpenBlob()
: CSQLITE_Blob
- x_OpenDataSources()
: CUIDataSourceService
- x_OpenDataStream()
: CProcessor_ID2
- x_OpenDB()
: CLDS_Manager
- x_OpenDefaultView()
: CProjectService
- x_OpenIndexDB()
: CNCBlobStorage
- x_OpenIStream()
: CCleanupApp, CAsn2FlatApp, CAsn2FastaApp, CAnnotWriterApp
- x_OpenMask()
: CMaskFromFasta, CFastaReader
- x_OpenOrtho()
: CGlPane
- x_OpenPixels()
: CGlPane
- x_OpenProjects()
: CProjectTask
- x_OpenWorkspace()
: CProjectTask
- x_OptimizeSeq_loc()
: CSeq_loc_Mapper_Base
- x_OptimizeStatusMatrix()
: CQueueDataBase
- x_Organelle()
: CEmblFormatter
- x_OrganelleName()
: CDeflineGenerator
- x_OrganisClassification()
: CEmblFormatter
- x_OrganismSource()
: CEmblFormatter
- x_OrgModToSubtype()
: CCleanup_imp
- x_OrientAlign()
: CContigAssembly
- x_OutOfBounds()
: CSeqDBIsam
- x_OutputSeq()
: CDisplaySeqalign
- x_Overhead()
: CWriteDB_IndexFile
- x_Pack()
: CSeqConvert_imp
- x_PackElementIndex()
: CCache< TKey, TValue, THandler, TLock, TSize >
- x_PackName()
: CTar
- x_PackNewAmbig()
: CAmbigDataBuilder
- x_PackOldAmbig()
: CAmbigDataBuilder
- x_Pad()
: CFlatItemFormatter
- x_PairedReads()
: oligofar::CFastqFileReader, oligofar::CSolexaFileReader
- x_Pan()
: CGl3dWindow, CSplineWindow, CGl3dWindow
- x_ParamMatrix()
: CCurveBezier
- x_Parent2Local()
: CSeqGlyph
- x_ParentAttach()
: CSeq_annot_SNP_Info, CSeq_entry_Info, CSeq_annot_Info, CBioseq_set_Info, CBioseq_Info, CBioseq_Base_Info
- x_ParentDetach()
: CSeq_annot_SNP_Info, CSeq_entry_Info, CSeq_annot_Info, CBioseq_set_Info, CBioseq_Info, CBioseq_Base_Info
- x_Parse()
: CDiagStrErrCodeMatcher, CCgiUserAgent
- x_ParseAlignRecord()
: CGFFReader
- x_ParseAndPlace()
: CGFFReader
- x_ParseBlobKey()
: CNetCacheKey
- x_ParseBrowserLine()
: CReaderBase
- x_ParseBrowserLineToSeqEntry()
: CGff3Reader
- x_ParseCodeBreak()
: CCleanup_imp
- x_ParseConfigLine()
: CSplitQueryTestFixture
- x_ParseDateComment()
: CGFFReader
- x_ParseExtraArgs()
: SDiagMessage
- x_ParseFeatRecord()
: CGFFReader
- x_ParseFeature()
: CMicroArrayReader
- x_ParseFeatureInterval()
: CGFFReader
- x_ParseFeatureTableLine()
: CFeature_table_reader_imp
- x_ParseFilteringAlgorithmSpec()
: CMaskingFmtSpecHelper
- x_ParseGraphData()
: CWiggleReader
- x_ParseHeader()
: oligofar::CGuideSamFile
- x_ParseLocation()
: CSplitParser
- x_ParseOptionsString()
: CBlastArgs
- x_ParsePAXHeader()
: CTar
- x_ParseStructuredComment()
: CGFFReader
- x_ParseTags()
: CNetScheduleHandler, CJob
- x_ParseTimestampParam()
: CNCBlobStorage
- x_ParseToken()
: CCgiUserAgent
- x_ParseTrackData()
: CWiggleReader
- x_ParseTrackLine()
: CReaderBase, CMicroArrayReader
- x_ParseTrackLineToSeqEntry()
: CGff3Reader
- x_ParseTrnaString()
: CFeature_table_reader_imp
- x_ParseTypeComment()
: CGFFReader
- x_ParseV2Attributes()
: CGFFReader
- x_ParseV3Attributes()
: CGFFReader
- x_PartialDeserialize()
: CBlastTabular
- x_PartialSerialize()
: CBlastTabular, CAlignShadow
- x_Paste()
: CAppExplorerService
- x_PasteItem()
: CAppExplorerService
- x_PasteProjectFolder()
: CAppExplorerService
- x_PasteProjectItem()
: CAppExplorerService
- x_PatchLock()
: CDataLoaderPatcher
- x_PatchLockSet()
: CDataLoaderPatcher
- x_PerformCheckPointNoLock()
: CBDB_Cache
- x_Pick()
: CSeqDBMapStrategy
- x_PidLock()
: CBDB_Cache
- x_PlaceAlignment()
: CGFFReader
- x_PlaceCluster()
: CAlignedFeatureGraph
- x_PlaceFeature()
: CGFFReader, CAlignedFeatureGraph
- x_PlaceSeq()
: CGFFReader
- x_PollEngines()
: CAppJobDispatcher
- x_PollUntilDone()
: CRemoteBlast
- x_Pop()
: CSeqMap_CI
- x_Pop_NonBlocking()
: CSyncQueue< Type, Container >
- x_PopEntry()
: CBioseq_CI
- x_PopEvtHandler()
: CGBenchGUI
- x_PopStackPath()
: CObjectStack
- x_PopulateBioseq_HandleSet()
: CScope_Impl
- x_PopulateRows()
: CAlnSpanVertModel
- x_PopulateTree()
: CTaxTreeBrowser
- x_PostAttachToProject()
: CDotMatrixView, CCrossAlignView, CAnnotCompareView, CAlignSpanView, CProjectView
- x_PostCheck()
: CArgDescriptions
- x_PostProcess()
: CPhyloTreeCGIApplication, CGlCgiImageApplication
- x_PostUpdateEvent()
: CObservable
- x_PPos
: CConn_Streambuf, CRWStreambuf
- x_PreAttachToProject()
: CDotMatrixView, CCrossAlignView, CAnnotCompareView, CAlignSpanView, CProjectView
- x_PreCheck()
: CArgDescriptions
- x_PreCreateSparseDataSource()
: CAlnMultiDSBuilder
- x_PredictAGSites
: CAntigenic
- x_PredictRegions()
: CCoiledCoil
- x_PredictSignalSeq
: CSignalSeq
- x_PreferredDescrHeight()
: CMapItem
- x_PreferredLabelHeight()
: CMapItem
- x_PreferredSeparatorHeight()
: CMapItem, CGroupMapWidget::CGroupItem
- x_PrefetchDesc()
: CBioseq_Base_Info
- x_Prepare()
: CSQLITE_Statement
- x_PrepareBlastQueryStructures()
: CSplitQueryTestFixture
- x_PrepareMenu()
: CSnpTableWidget
- x_PrepareProjectItem()
: CBLASTSeqToolJob, CNetBlastLoadingJob, CDataLoadingAppJob
- x_PrepareSearch()
: CSearchJobBase
- x_PrepareSockStream()
: CNCMessageHandler
- x_PrepFilePoolsToDelete()
: CNCBlobStorage
- x_PreProcess()
: CPhyloTreeCGIApplication, CAlnMultiCGIApplication, CCgiFontTestApp, CBlastHitMatrix, CGlCgiImageApplication
- x_PreprocessValues()
: CWig2tableApplication
- x_PreserveDestinationLocs()
: CSeq_loc_Mapper_Base
- x_PreserveNormalSize()
: CSplitter
- x_Prev()
: CSeqMap_CI
- x_PrevCacheSeg()
: CSeqVector_CI
- x_Primitive()
: CXmlRetrieveJob
- x_Print()
: CSeqDB_FilterTree, CDiagStrErrCodeMatcher
- x_PrintAliasesAsXml()
: CArgDescriptions
- x_PrintAlignmentLength()
: CBlastTabularInfo
- x_PrintBegin()
: CHTMLOpenElement
- x_PrintBitScore()
: CBlastTabularInfo
- x_PrintBlastDatabaseInformation()
: CBlastDBCmdApp
- x_PrintClustal()
: CMultiAlnPrinter
- x_PrintComment()
: CArgDescriptions
- x_PrintDefLine()
: CDisplaySeqalign
- x_PrintDynamicFeatures()
: CDisplaySeqalign
- x_PrintEvalue()
: CBlastTabularInfo
- x_PrintFastaPlusGaps()
: CMultiAlnPrinter
- x_PrintFeatures()
: CDisplaySeqalign
- x_PrintField()
: CBlastTabularInfo
- x_PrintFieldNames()
: CBlastTabularInfo
- x_PrintFrames()
: CBlastTabularInfo
- x_PrintGapOpenings()
: CBlastTabularInfo
- x_PrintGaps()
: CBlastTabularInfo
- x_PrintItems()
: CProjectServiceTestJob
- x_PrintJobStat()
: CQueue
- x_PrintLine()
: CPdf
- x_PrintMatrix()
: oligofar::TAligner_SW< CQuery, CSubject >
- x_PrintMessage()
: CDiagContext
- x_PrintMismatches()
: CBlastTabularInfo
- x_PrintNewickTree()
: CGuideTree
- x_PrintNexus()
: CMultiAlnPrinter
- x_PrintNumIdentical()
: CBlastTabularInfo
- x_PrintNumPositives()
: CBlastTabularInfo
- x_PrintOneQueryFooter()
: CBlastFormat
- x_PrintPatterns()
: CAgpValidateReader
- x_PrintPercentIdentical()
: CBlastTabularInfo
- x_PrintPercentPositives()
: CBlastTabularInfo
- x_PrintPhylipInterleaved()
: CMultiAlnPrinter
- x_PrintPhylipSequential()
: CMultiAlnPrinter
- x_PrintPolygon()
: CPdf
- x_PrintQueryAccession()
: CBlastTabularInfo
- x_PrintQueryAccessionVersion()
: CBlastTabularInfo
- x_PrintQueryEnd()
: CBlastTabularInfo
- x_PrintQueryFrame()
: CBlastTabularInfo
- x_PrintQueryGi()
: CBlastTabularInfo
- x_PrintQuerySeq()
: CBlastTabularInfo
- x_PrintQuerySeqId()
: CBlastTabularInfo
- x_PrintQueryStart()
: CBlastTabularInfo
- x_PrintScore()
: CBlastTabularInfo
- x_PrintServerStats()
: CNetCacheServer
- x_PrintShortJobStat()
: CQueue
- x_PrintStructuredReport()
: CBlastFormat
- x_PrintSubjectAccession()
: CBlastTabularInfo
- x_PrintSubjectAccessionVersion()
: CBlastTabularInfo
- x_PrintSubjectAllAccessions()
: CBlastTabularInfo
- x_PrintSubjectAllGis()
: CBlastTabularInfo
- x_PrintSubjectAllSeqIds()
: CBlastTabularInfo
- x_PrintSubjectEnd()
: CBlastTabularInfo
- x_PrintSubjectFrame()
: CBlastTabularInfo
- x_PrintSubjectGi()
: CBlastTabularInfo
- x_PrintSubjectSeq()
: CBlastTabularInfo
- x_PrintSubjectSeqId()
: CBlastTabularInfo
- x_PrintSubjectStart()
: CBlastTabularInfo
- x_PrintTabularReport()
: CBlastFormat
- x_PrintTemplate()
: CHTMLPage
- x_PrintText()
: CPageHandler, CPdf
- x_PrintTo()
: CPdfObject
- x_PrintTop()
: CAlnGraphic
- x_PrintTotals()
: CAgpValidateReader
- x_PrivateFunc()
: CMyClass
- x_ProcessAlign()
: CAnnotObject_Info
- x_ProcessAuth()
: CWNCTConnectionHandler
- x_ProcessComparison()
: CXcompareAnnotsApplication
- x_ProcessData()
: CId2FetchApp
- x_ProcessDenseg()
: CPsiBlastInputData
- x_ProcessDownstream()
: CwxTreeCtrlEx
- x_ProcessEntry()
: CTar
- x_ProcessFeat()
: CAnnotObject_Info
- x_ProcessGetBlob()
: CId2ReaderBase
- x_ProcessGetBlobId()
: CId2ReaderBase
- x_ProcessGetBlobSeqIds()
: CId2ReaderBase
- x_ProcessGetChunk()
: CId2ReaderBase
- x_ProcessGetSeqId()
: CId2ReaderBase
- x_ProcessGetSeqIdSeqId()
: CId2ReaderBase
- x_ProcessGetSplitInfo()
: CId2ReaderBase
- x_ProcessGetStringSeqId()
: CId2ReaderBase
- x_ProcessGraph()
: CAnnotObject_Info
- x_ProcessInputData()
: CMakeBlastDBApp
- x_ProcessInputStream()
: CCgiRequest
- x_ProcessLandMarkFeatures()
: CGeneModelFeatJob
- x_ProcessLocation()
: CHandleRangeMap, CSeq_loc_CI
- x_ProcessMappingRange()
: CXcompareAnnotsApplication
- x_ProcessMappingRanges()
: CXcompareAnnotsApplication
- x_ProcessMaskData()
: CMakeBlastDBApp
- x_ProcessOneOption()
: CRemoteBlast, CBlastOptionsBuilder
- x_ProcessOptions()
: CRemoteBlast, CBlastOptionsBuilder
- x_ProcessPacket()
: CId2ReaderBase
- x_ProcessPair()
: CSplignApp, CCompartApp
- x_ProcessQueryString()
: CCgiRequest
- x_ProcessQueue()
: CWNCTConnectionHandler
- x_ProcessReply()
: CId2ReaderBase
- x_ProcessRequest()
: CId2FetchApp, CId2ReaderBase, CWNCTConnectionHandler
- x_ProcessResponse()
: CRADispatcherClient
- x_ProcessResult()
: CTextDataSource
- x_ProcessResultInternal()
: CTL_Connection
- x_ProcessSearchRequest()
: CBlastDBCmdApp
- x_ProcessSeqAlignSetFromFile()
: CXcompareAnnotsApplication
- x_ProcessSingleQuery()
: CBlastDBCmdApp
- x_ProcessSoapRequest()
: CSoapServerApplication
- x_ProcessTermSegm()
: CSplign
- x_ProcessTypeNamespace()
: CObjectOStreamXml
- x_ProcessUpstream()
: CwxTreeCtrlEx
- x_ProcessWsdlRequest()
: CSoapServerApplication
- x_ProjectNotSaved()
: CProjectTask
- x_PromoteCdregion()
: CPromote
- x_PromoteFeatures()
: CPromote
- x_PromoteMergeableSource()
: CCleanup_imp
- x_PromotePub()
: CPromote
- x_PromoteRna()
: CPromote
- x_PropagateCommonState()
: CPhyloTreeDataSource
- x_PSIMatrix2Asn1()
: CPssmEngine
- x_Publish()
: CWriteDB_Impl
- x_Pubmed()
: CGenbankFormatter
- x_PurgeRowListMap()
: CAlnMultiRenderer
- x_PurgeUnconditional()
: CQueueDataBase
- x_Push()
: CSeqMap_CI, CSeq_annot_CI
- x_Push_NonBlocking()
: CSyncQueue< Type, Container >
- x_Pushback()
: CStreamUtils
- x_PushEntry()
: CBioseq_CI
- x_PushEvtHandler()
: CGBenchGUI
- x_PushExonPart()
: CSeq_align_Mapper_Base
- x_PushLocToDstMix()
: CSeq_loc_Mapper_Base
- x_PushMappedRange()
: CSeq_loc_Mapper_Base
- x_PushRangesToDstMix()
: CSeq_loc_Mapper_Base
- x_PushSeg()
: CSeq_align_Mapper_Base
- x_PushSourceRange()
: CSeq_loc_Mapper_Base
- x_PushStackPath()
: CObjectStack
- x_Put()
: CBDB_LobFile, CNcbiDiag
- x_PutChain()
: CNCMMChainsPool
- x_PutChunk()
: CNCMMChunksPool
- x_PutIntoFilter()
: CDiagSyntaxParser
- x_PutSemPred()
: CBlockingQueue< TRequest >
- x_Query_Op()
: CAlignFilter
- x_Query_Range()
: CAlignFilter
- x_QueryBioseqToSSeqLoc()
: CBlastFormatterApp
- x_QueryMaskingLocationsToNetwork()
: CRemoteBlast
- x_Random()
: CAmbigDataBuilder
- x_RangeMapIsEmpty()
: SIdAnnotObjs
- x_RangemapLoop()
: oligofar::CSeqScanner
- x_RangeToSeq_loc()
: CSeq_loc_Mapper_Base
- x_RankAndStore()
: CCompartApp
- x_Read()
: CResultZBtSrcX, CNlmZipReader, CSeq_annot_SNP_Info_Reader, CNcbiRegistry, CCompoundRWRegistry, IRWRegistry
- x_ReadAffIdx_NoLock()
: CQueue
- x_ReadAliasFile()
: CSeqDBAliasNode
- x_ReadAliasSetFile()
: CSeqDBAliasSets
- x_ReadAndProcess()
: CTar
- x_ReadAndProcessFile()
: CGeneFileWriter
- x_ReadAnnotDesc()
: CBinsJob
- x_ReadArchive()
: CTar
- x_ReadAsciiMsa()
: CPsiBlastInputClustalW
- x_ReadAuthMessage()
: CNCMessageHandler
- x_ReadBlobChunk()
: CNCMessageHandler
- x_ReadBlobChunkLength()
: CNCMessageHandler
- x_ReadBlobCoordsFromCache()
: CNCBlobStorage
- x_ReadBlobKeyFromCache()
: CNCBlobStorage
- x_ReadBlobSignature()
: CNCMessageHandler
- x_ReadBuffer()
: CWigBufferedLineReader, CBufferedLineReader
- x_ReadBytes()
: CSeqDBExtFile
- x_ReadCache()
: CBDB_ExtBlobStore< TBV >
- x_ReadCachedDBs()
: CNetBLASTUIDataSource
- x_ReadCacheFile()
: CMRUCache
- x_ReadColumnHeaders()
: CAnalysisFile
- x_ReadCommand()
: CNCMessageHandler
- x_ReadConfiguration()
: CNcbiTestApplication
- x_ReadContig()
: CPhrapReader
- x_ReadCRLF()
: CBufferedSockReaderWriter
- x_ReadData()
: CAnalysisFileLoader, CProcessor_ID2
- x_ReadDataLine()
: CAnalysisFile
- x_ReadEntryInfo()
: CTar
- x_ReadExtraGis()
: CSeqAlignFilter
- x_ReadFastaFile()
: CAppNWA
- x_ReadFastaSequences()
: CGFFReader
- x_ReadFastaSetId()
: CSplignApp
- x_ReadFieldInfo()
: CQueue
- x_ReadFields()
: CSeqDBGiMask, CSeqDBColumn
- x_ReadFromFile()
: CRpsAuxFile
- x_ReadInputHits()
: CAppHitFilter
- x_ReadIntFixed()
: CBlastDbBlob
- x_ReadLastBlobCoords()
: CNCBlobStorage
- x_ReadLine()
: CImageIOGif, CSeqDBAliasNode, CWiggleReader, CGff3Reader
- x_ReadMetaData()
: CSeqDBColumn
- x_ReadMultipartHeaders()
: CCgiEntryReaderContext
- x_ReadOldFormatData()
: CPhrapReader
- x_ReadOldSequence()
: CPhrapReader
- x_ReadPssmFromFile()
: CPsiBlastTestFixture, CPsiBl2SeqTestFixture
- x_ReadQueryBoundsPerChunk()
: CSplitQueryTestFixture
- x_ReadRaw()
: CBlastDbBlob
- x_ReadRead()
: CPhrapReader
- x_ReadRegistryInfo()
: CAnalysisFile
- x_ReadRepeated()
: CTransmissionReader
- x_ReadReply()
: CId2FetchApp
- x_ReadResponseId()
: CRADispatcherClient
- x_ReadSegSet()
: CFastaReader
- x_ReadSeqEntriesFromFile()
: CPsiBlastTestFixture, CPsiBl2SeqTestFixture
- x_ReadSeqLens()
: CCompartApp
- x_ReadSeqsToAlign()
: CFastaReader
- x_ReadSplitQueryInfoForTest()
: CSplitQueryTestFixture
- x_ReadStart()
: CTransmissionReader
- x_ReadStorageParams()
: CNCBlobStorage
- x_ReadString()
: CBlastDbBlob
- x_ReadSwapped()
: CSeqDBExtFile
- x_ReadTag()
: CPhrapReader
- x_ReadToolInfo()
: CUIToolRegistry
- x_ReadURLEncodedEntry()
: CCgiEntryReaderContext
- x_ReadValues()
: CSeqDBAliasNode
- x_ReadVarInt()
: CBlastDbBlob
- x_ReadVectorOfVectorsForTest()
: CSplitQueryTestFixture
- x_ReadWA()
: CPhrapReader
- x_ReadZipHeader()
: CNlmZipReader
- x_RealAdd()
: CSeq_annot_EditHandle
- x_RealAddId()
: CBioseq_EditHandle
- x_RealAddSeq_descr()
: CSeq_entry_EditHandle, CBioseq_set_EditHandle, CBioseq_EditHandle
- x_RealAddSeqdesc()
: CSeq_entry_EditHandle, CBioseq_set_EditHandle, CBioseq_EditHandle
- x_RealignBlocks()
: CMultiAligner
- x_RealignSequences()
: CMultiAligner
- x_reallocate_if_necessary()
: CSeqDB::TSequenceRanges
- x_RealRemove()
: CSeq_graph_Handle, CSeq_feat_EditHandle, CSeq_align_Handle
- x_RealRemoveId()
: CBioseq_EditHandle
- x_RealRemoveSeqdesc()
: CSeq_entry_EditHandle, CBioseq_set_EditHandle, CBioseq_EditHandle
- x_RealReplace()
: CSeq_graph_Handle, CSeq_feat_EditHandle, CSeq_align_Handle
- x_RealResetClass()
: CBioseq_set_EditHandle
- x_RealResetColl()
: CBioseq_set_EditHandle
- x_RealResetDate()
: CBioseq_set_EditHandle
- x_RealResetDescr()
: CSeq_entry_EditHandle, CBioseq_set_EditHandle, CBioseq_EditHandle
- x_RealResetId()
: CBioseq_set_EditHandle, CBioseq_EditHandle
- x_RealResetInst()
: CBioseq_EditHandle
- x_RealResetInst_Ext()
: CBioseq_EditHandle
- x_RealResetInst_Fuzz()
: CBioseq_EditHandle
- x_RealResetInst_Hist()
: CBioseq_EditHandle
- x_RealResetInst_Length()
: CBioseq_EditHandle
- x_RealResetInst_Mol()
: CBioseq_EditHandle
- x_RealResetInst_Repr()
: CBioseq_EditHandle
- x_RealResetInst_Seq_data()
: CBioseq_EditHandle
- x_RealResetInst_Strand()
: CBioseq_EditHandle
- x_RealResetInst_Topology()
: CBioseq_EditHandle
- x_RealResetLevel()
: CBioseq_set_EditHandle
- x_RealResetRelease()
: CBioseq_set_EditHandle
- x_RealSetClass()
: CBioseq_set_EditHandle
- x_RealSetColl()
: CBioseq_set_EditHandle
- x_RealSetDate()
: CBioseq_set_EditHandle
- x_RealSetDescr()
: CSeq_entry_EditHandle, CBioseq_set_EditHandle, CBioseq_EditHandle
- x_RealSetId()
: CBioseq_set_EditHandle
- x_RealSetInst()
: CBioseq_EditHandle
- x_RealSetInst_Ext()
: CBioseq_EditHandle
- x_RealSetInst_Fuzz()
: CBioseq_EditHandle
- x_RealSetInst_Hist()
: CBioseq_EditHandle
- x_RealSetInst_Length()
: CBioseq_EditHandle
- x_RealSetInst_Mol()
: CBioseq_EditHandle
- x_RealSetInst_Repr()
: CBioseq_EditHandle
- x_RealSetInst_Seq_data()
: CBioseq_EditHandle
- x_RealSetInst_Strand()
: CBioseq_EditHandle
- x_RealSetInst_Topology()
: CBioseq_EditHandle
- x_RealSetLevel()
: CBioseq_set_EditHandle
- x_RealSetRelease()
: CBioseq_set_EditHandle
- x_RebuildObjectIndex()
: CSnpTableView, CFeatTableView, CMultiAlignView
- x_RecalculateOffsets()
: CSeqTextPane
- x_ReceiveMainBlob()
: CId1Reader
- x_ReceiveReply()
: CId2ReaderBase, CId2Reader, CId1Reader
- x_RecurseDescriptorsForMerge()
: CCleanup_imp
- x_RecurseForDescriptors()
: CCleanup_imp
- x_RecurseForSeqAnnots()
: CCleanup_imp
- x_Recycle()
: impl::CDriverContext
- x_RedrawControls()
: CGlWidgetBase, CAlnMultiWidget
- x_ReduceStreamCountTo()
: CLDS_IStreamCache
- x_RefCounterError()
: CPackString
- x_Reference()
: CGenbankFormatter
- x_RefillPool()
: CNCMMChunksPool
- x_Refresh()
: CTaxTreeBrowser
- x_RefSeqComments()
: CFlatGatherer
- x_RefTSEMatch()
: CSeqMap_CI
- x_RegionComments()
: CFlatGatherer
- x_Register()
: CObjFingerprint
- x_RegisterAccelerators()
: CGBenchGUI, CFrameworkDemoGUI
- x_RegisterAliases()
: CwxMainFrame
- x_RegisterBioObject()
: CTSE_Info
- x_RegisterClient()
: CWindowManager
- x_RegisterCommands()
: CSnpPackage, CSeqEditPackage, CSeqPackage, CAlignPackage, CGBenchGUI, CFrameworkDemoGUI
- x_RegisterExtensionFactories()
: CViewManagerService
- x_RegisterHandler()
: CGlWidgetPane
- x_RegisterIcon()
: CLayoutTrack
- x_RegisterImageAliases()
: CFrameworkDemoGUI
- x_RegisterImageHandlers()
: CwxNCBIApp
- x_RegisterLoader()
: CObjectManager
- x_RegisterStdTracks()
: CFeaturePanel
- x_RegisterUserTypes()
: CGBenchGUI
- x_RegReadBool()
: CNetCacheServer
- x_RegReadInt()
: CNetCacheServer
- x_RegReadString()
: CNetCacheServer
- x_RegUnregClient()
: SNetScheduleExecuterImpl
- x_Rehash()
: oligofar::CBatch
- x_ReinitFeatureTrack()
: CAllOtherFeaturesTrack
- x_ReinitSubtracks()
: CTrackContainer, CAllOtherFeaturesTrack
- x_ReinitTrack()
: CTrackContainer
- x_Release()
: CInitGuard, AutoArray< X, Del >, AutoPtr< X, Del >, CDiagContext_Extra
- x_ReleaseAll()
: CAnnot_Collector
- x_ReleaseAllChains()
: CNCMMChainsPool
- x_ReleaseAllChunks()
: CNCMMChunksPool
- x_ReleaseConnection()
: CReader
- x_ReleaseLastLoadLock()
: CDataSource
- x_ReleaseLastLock()
: CDataSource
- x_ReleaseLastTSELock()
: CDataSource
- x_ReleaseLock()
: CNCBlobLockHolder, CYieldingRWLock
- x_ReleaseMouse()
: CMouseZoomHandler
- x_Reload()
: CMetaRegistry
- x_ReloadIDLists()
: CwxChooseSeqDlg
- x_ReloadMessages()
: CDiagConsoleList
- x_Relock()
: CTSE_Lock
- x_RemapAnnotObject()
: CSeq_annot_Info
- x_RemapGeneRefs()
: CGFFReader
- x_Remark()
: CGenbankFormatter
- x_RemoteBlast()
: CRemotePssmSearch, CRemoteSeqSearch
- x_Remove()
: CDeleteSeqFeatCommand, CObjectIndex
- x_RemoveAnnotObjs()
: CTSE_Info
- x_RemoveAsn2ffGeneratedComments()
: CCleanup_imp
- x_RemoveChild()
: CSplitter
- x_RemoveChildren()
: CProjectFolderPrx
- x_RemoveClient()
: CWindowManager
- x_RemoveConnection()
: CReader
- x_RemoveConnectionSlot()
: CReader, CId2Reader, CId1Reader, CCacheReader
- x_RemoveDescrByType()
: CCleanup_imp
- x_RemoveDescrForAllInSet()
: CCleanup_imp
- x_RemoveDuplicatePubsFromBioseqsInSet()
: CCleanup_imp
- x_RemoveEmptyFeatureAnnots()
: CCleanup_imp
- x_RemoveEmptyFeatures()
: CCleanup_imp
- x_RemoveEmptyGenbankDesc()
: CCleanup_imp
- x_RemoveEmptyPubs()
: CCleanup_imp
- x_RemoveEmptyTitles()
: CCleanup_imp
- x_RemoveExtraGis()
: CSeqAlignFilter
- x_RemoveFileFromList()
: CNCFileSystem
- x_RemoveFilter()
: CSnpFilterUI
- x_RemoveFromFolder()
: CWorkspacePrx
- x_RemoveFromHistory()
: CScope_Impl
- x_RemoveFromIdMap()
: CObjectIndex
- x_RemoveFromLRUImpl()
: CNCMMDBPage
- x_RemoveFromReadGroup()
: CQueue
- x_RemoveFromRegistry()
: CODBCContext, CDBLibContext, CTLibContext
- x_RemoveFromSelection()
: CTextSelHandler, CLinearSelHandler
- x_RemoveGeneXref()
: CCleanup_imp
- x_RemoveImpSourceFeatures()
: CCleanup_imp
- x_RemoveIter()
: CSyncQueue_ConstAccessGuard< Type, Container >
- x_RemoveJob()
: CTextDataSource
- x_RemoveJobRecord()
: CAppJobDispatcher
- x_RemoveLastInfoLock()
: CScopeInfo_Base
- x_RemoveLastLock()
: CSeq_id_Info
- x_RemoveMarkedGeneXref()
: CCleanup_imp
- x_RemoveMarkedGeneXrefs()
: CCleanup_imp
- x_RemoveMultipleTitles()
: CCleanup_imp
- x_RemoveNucProtSetTitle()
: CCleanup_imp
- x_RemoveOldestStream()
: CLDS_IStreamCache
- x_RemoveOptionalFeatures()
: CAutoDef
- x_RemovePIDXrefs()
: CCleanup_imp
- x_RemovePosition()
: CCpGIslands
- x_RemoveProjectFolder()
: CAppExplorerService
- x_RemoveProjectItem()
: CAppExplorerService
- x_RemoveProjects()
: CProjectTask
- x_RemovePseudoProducts()
: CCleanup_imp
- x_RemovePubMatch()
: CCleanup_imp
- x_RemoveQuals()
: CFeatureItem
- x_RemoveSetFromList()
: CNCMMSizePool
- x_RemoveSiteRefImpFeats()
: CCleanup_imp
- x_RemoveTags()
: CQueue
- x_RemoveTaskFromQueue()
: CThreadPool_Impl
- x_RemoveTaskImpl()
: CScheduler_MT
- x_RemoveToken()
: CAffinityDict
- x_RemoveTransaction()
: CBDB_RawFile
- x_RemoveUnnecessaryGeneXrefs()
: CCleanup_imp
- x_RemoveView()
: CProjectService
- x_RemoveWDir()
: IRemoteAppRequest_Impl
- x_RemoveWorkspaceFolder()
: CAppExplorerService
- x_Render()
: CSeqGraphicPane, CRulerDemoPanel, CGlPaneWidgetChildDemo, CGlInfoWindow, CGl3dWindow, CFontWindow, CCrossAlnPane, CGlInfoWindow, CGuideTree, CBlastHitMatrix, CGLTestWMClient, CGLCanvas, CSeqTextPane, CPhyloSlantedCladogram, IPhyloTreeRenderer, CPhyloRectCladogram, CPhyloRadial, CPhyloTreePane, CPhyloForce, CHitMatrixPane, CAlnMultiRenderer, CAlnMultiPane
- x_RenderAdaptiveMargins()
: IPhyloTreeRenderer
- x_RenderAlign()
: CAlnVecRow
- x_RenderAlignScores()
: CAlnVecRow
- x_RenderAlignSegments()
: CAlnVecRow
- x_RenderAllPosLabels()
: CRuler
- x_RenderAlnPos()
: CAlnVecRow
- x_RenderAveragableScores()
: CAlignGlyph, CAlnVecRow
- x_RenderAxisAndGrid()
: CHitMatrixRenderer, CHitMatrixPane
- x_RenderBackground()
: CRuler
- x_RenderBarChart()
: CComboChart
- x_RenderBottomRuler()
: CSeqTextPane
- x_RenderBox()
: CAlnMultiHeader
- x_RenderCodons()
: CSeqTextPane
- x_RenderCodonTick()
: CSeqTextPane
- x_RenderConfGraph()
: CTraceGraph
- x_RenderContainers()
: CHitMatrixRenderer, CHitMatrixPane
- x_RenderContent()
: CSeqTextPane, CSequenceTrack, CLayoutTrack, CGlyphContainer, CPhyloTreePane, CHitMatrixPane, CLDBlockLine
- x_RenderContour()
: CTraceGraph
- x_RenderCurveSegment()
: CTraceGraph
- x_RenderDescr()
: CAlnVecRow
- x_RenderEmptyBox()
: CAlnVecRow
- x_RenderEndPos()
: CAlnVecRow
- x_RenderEventHandler()
: CHitMatrixGraph
- x_RenderFeature()
: CAlignedFeatureGraph
- x_RenderFeatureExtras()
: CSeqTextPane
- x_RenderFirstRow()
: CTTWindow
- x_RenderFoundLocations()
: CSeqTextPane
- x_RenderFrame()
: CLayoutTrack
- x_RenderGraph()
: CAlnVecRow
- x_RenderGraphs()
: CAlnMultiRenderer
- x_RenderHairLineSelections()
: CFeaturePanel
- x_RenderHeader()
: CAlnMultiRenderer
- x_RenderHeaderHandler()
: CAlnMultiPane
- x_RenderHistogram()
: CHistogramGraph
- x_RenderHits()
: CHitMatrixGraph
- x_RenderHorzPosLabel()
: CRuler
- x_RenderIcon()
: CLayoutTrack
- x_RenderIconExpand()
: CAlnVecRow
- x_RenderIcons()
: CAlnVecRow
- x_RenderIconStrand()
: CAlnVecRow
- x_RenderImage()
: CPhyloTreeCGIApplication, CGuideTree, CBlastHitMatrix
- x_RenderImageFromCache()
: CPhyloTreeCGIApplication
- x_RenderInserts()
: CAlnVecRow
- x_RenderIntensityGraphs()
: CTraceGraph
- x_RenderItem()
: CLegend
- x_RenderItems()
: CAlnMultiRenderer, CLegend
- x_RenderItemsRange()
: CAlnMultiRenderer
- x_RenderLeftRuler()
: CSeqTextPane
- x_RenderLine()
: IPhyloTreeRenderer
- x_RenderLinePlot()
: CComboChart
- x_RenderMark()
: CAlnMultiPane
- x_RenderMasterRow()
: CAlnMultiRenderer
- x_RenderMinimap()
: CMinimapHandler
- x_RenderMouseZoomHandler()
: CPhyloTreePane, CHitMatrixPane
- x_RenderMoveMode()
: CAlnMultiHeaderHandler
- x_RenderNode()
: IPhyloTreeRenderer
- x_RenderNonAveragableScores()
: CAlignGlyph, CAlnVecRow
- x_RenderOpSymbol()
: CTextSelHandler
- x_RenderOriginAndMetric()
: CRuler
- x_RenderPage()
: CPhyloTreeCGIApplication
- x_RenderPan()
: CMouseZoomHandler
- x_RenderPath()
: CHitMatrixGraph
- x_RenderPercentBarChart()
: CComboChart
- x_RenderPosLabel()
: CRuler
- x_RenderProgressBar()
: CLayoutTrack
- x_RenderProgressPanel()
: CAlnMultiPane
- x_RenderRange()
: CTextSelHandler, CRuler
- x_RenderRectSelHandler()
: CSeqGraphicPane
- x_RenderResizeMode()
: CAlnMultiHeaderHandler
- x_RenderRow()
: CAlnMultiRenderer
- x_RenderRuler()
: CRulerDemoPanel, CAlnMultiRenderer
- x_RenderScale()
: CRuler, CMouseZoomHandler
- x_RenderSecondRow()
: CTTWindow
- x_RenderSelectedFeatures()
: CTextSelHandler
- x_RenderSelection()
: IPhyloTreeRenderer, CHitMatrixGraph, CAlnMultiPane
- x_RenderSelHandler()
: CGlPaneWidgetChildDemo, CSeqTextPane, CPhyloTreePane, CHitMatrixPane
- x_RenderSeqEnd()
: CAlnVecRow
- x_RenderSeqLength()
: CAlnVecRow
- x_RenderSeqStart()
: CAlnVecRow
- x_RenderSequence()
: CSequenceTextGraph, CSequenceTrack, CAlnVecRow
- x_RenderSignalGraph()
: CTraceGraph
- x_RenderSpline()
: IPhyloTreeRenderer
- x_RenderStackedBarChart()
: CComboChart
- x_RenderStartPos()
: CAlnVecRow
- x_RenderStatusText()
: CFeatureGraph
- x_RenderStream()
: CNSInfoRenderer
- x_RenderString()
: CNSInfoRenderer
- x_RenderText()
: CFlatFileHeader, CTextItem, CPlainTextItem, CXmlBaseItem, CInfoItem, CFlatFileTextItem, CFlatFileSeqBlockCollapsed, CFlatFileFeatureCollapsed, CFastaTitleItem, CFastaSeqHdrItem, CFastaSeqBlockItem, CAsnHeaderPrimitive, CAsnHeaderItem, CAsnElementItem, CAsnBlockEndItem, CTraceGraph
- x_RenderTextCell()
: CAlnVecRow
- x_RenderThirdRow()
: CTTWindow
- x_RenderTitleBar()
: CLayoutTrack, CFeaturePanel
- x_RenderUnaligned()
: CAlnVecRow
- x_RenderVertPosLabel()
: CRuler
- x_RenderView()
: CCgiTunnel2Grid, CCgi2RCgiApp
- x_RenderXml()
: CXmlVersionItem, CXmlValueItem, CXmlOpenTagItem, CXmlDoctypeItem, CXmlCloseTagItem, CXmlClosedBlock, CXmlBaseItem
- x_RenderZoomHandler()
: CAlnMultiPane
- x_RenderZoomRect()
: CMouseZoomHandler
- x_Replacer()
: CSeqFormatter, CBlastDbFormatter
- x_ReportAppInfo()
: CGBenchApplication
- x_ReportConError()
: CODBCContext
- x_ReportDuplicatePubLabels()
: CValidError_bioseq
- x_ReportDupOverlapFeaturePair()
: CValidError_bioseq
- x_ReportError()
: CAppJobTask
- x_ReportErrors()
: CBlastSearchTask
- x_ReportException()
: CNCMessageHandler
- x_ReportInvalidInputData()
: CProjectViewBase
- x_ReportNewDataConflict()
: CScope_Impl
- x_ReportTaskFailure()
: CAppTaskService
- x_ReportToDebugger()
: CException
- x_ReportUnresolvedIds()
: CBuildDatabase
- x_ReportVersion()
: CGBenchApplication
- x_RequestedType()
: CSeqdesc_CI
- x_RequestToCancel()
: CThreadPool_Task
- x_RequestUpdate()
: CSplitter
- x_RerootTree()
: CTree
- x_Reserve()
: CBlastDbBlob
- x_Reset()
: oligofar::TAligner_SW< CQuery, CSubject >, CGFFReader, CAlnMix, CAlnMixMerger, CSeq_annot_ftable_I, CSeq_annot_ftable_CI, CTlsBase
- x_reset_all()
: CSeqDB::TSequenceRanges
- x_ResetBackup()
: CSeqVector_CI
- x_ResetBioseq_setId()
: CTSE_Info
- x_ResetBioseqId()
: CTSE_Info
- x_ResetCache()
: CSeqVector_CI
- x_ResetDescr()
: CBioseq_set_Info, CBioseq_Info, CBioseq_Base_Info
- x_ResetDirtyAnnotIndex()
: CTSE_Info_Object, CDataSource
- x_ResetDirtyAnnotIndexNoParent()
: CTSE_Info_Object, CTSE_Info
- x_ResetFields()
: CBlastTabularInfo
- x_ResetFilterTab()
: CSnpFilterUI
- x_ResetFlags()
: CAlignRangeCollection< TAlnRange >
- x_ResetHandler()
: CFileDiagHandler
- x_ResetLock()
: CScopeInfo_Base
- x_ResetMenuBar()
: CWindowManager
- x_ResetMinKey()
: CMergeVolumes
- x_ResetObjAnnot()
: CBioseq_set_Info, CBioseq_Info, CBioseq_Base_Info
- x_ResetObjectWidget()
: CSelectionPanel
- x_ResetOwner()
: CThreadPool_Task
- x_ResetPosition()
: oligofar::fourplanes::CHashIterator
- x_ResetQueryDs()
: CBl2Seq
- x_ResetRowListMap()
: CAlnMultiRenderer
- x_ResetSelObjects()
: CSelectionPanel
- x_ResetSeqMap()
: CBioseq_Info
- x_ResetSequenceData()
: CWriteDB_Impl
- x_ResetState()
: CAppJob, CEditAppJob, CNetBlastMonitoringJob, CNetBlastSubmittingJob, CDataLoadingAppJob
- x_ResetSubjectDs()
: CBl2Seq
- x_ResetTargetChoice()
: CSelectionPanel
- x_ResetTSE_Lock()
: CTSE_ScopeInfo
- x_ResetValue()
: CBlastOptionsRemote
- x_Resize()
: CSeqDBBitVector, CSplitter
- x_ResizeAllCells()
: CSplitter
- x_ResizeCache()
: CSeqVector_CI
- x_ResizeToCell()
: CSplitter
- x_Resolve()
: CSeqMap_CI
- x_ResolveFromSource()
: CBuildDatabase
- x_ResolveGis()
: CBuildDatabase
- x_ResolveId()
: CId1Reader
- x_ResolveID()
: CGFFReader
- x_ResolveLoc()
: CGFFReader
- x_ResolveNames()
: CSeqDBAliasNode
- x_ResolveNewID()
: CGFFReader
- x_ResolveNewSeqName()
: CGFFReader
- x_ResolveRemoteId()
: CBuildDatabase
- x_ResolveSegmentLength()
: CSeqMap
- x_ResolveSegmentPosition()
: CSeqMap
- x_ResolveSeq_id()
: CScope_Impl
- x_ResolveSeqName()
: CGFFReader
- x_RestartSearch()
: CDataMiningPanel
- x_RestoreAdded()
: CTSE_ScopeInfo
- x_RestoreAttrs()
: CTar
- x_RestoreOutputExceptions()
: CCgiResponse
- x_RestoreViews()
: CProjectService
- x_Result()
: CSocketReaderWriter
- x_Results()
: CDBL_Connection
- x_Results2SeqAlign()
: CBl2Seq
- x_RetakeCreateLock()
: CNCBlobLockHolder
- x_RetRegionNonRecent()
: CSeqDBAtlas
- x_RetrieveBlobAttributes()
: CBDB_Cache
- x_RetrieveSessionId()
: CCgiRequest
- x_RetrieveTimeStamp()
: CDBAPI_Cache
- x_RetSeq()
: CSeqDBIter
- x_RetSeqBuffer()
: CSeqDBImpl
- x_ReturnJob()
: CGridWorkerNode
- x_Reverse()
: oligofar::TAligner_SW< CQuery, CSubject >
- x_ReverseFuzzLim()
: CMappingRange
- x_ReverseRangeOrder()
: CSeq_loc_Mapper_Base
- x_RevokeDataLoader()
: CObjectManager
- x_Right()
: oligofar::CSpacialRanges
- x_Rotate()
: CGl3dWindow, CSplineWindow, CGl3dWindow
- x_RotateDBParts()
: CNCBlobStorage
- x_Roundup()
: CRegionMap
- x_Run()
: CUIDataSourceTask, CNamedPipeProcessTask, CGBenchApplication, CNCBIwxApplication, CXmlRetrieveJob, CTextRetrieveJob, CFlatFileRetrieveJob, CFlatFeatureRetrieveJob, CFastaRetrieveJob, CAsnRetrieveJob, CEditAppJob, CNetBlastMonitoringJob, CNetBlastSubmittingJob, CAppTask, CProjectTask, CProjectServiceTestTask, CDataLoadingAppJob, CExportDlgTask, COpenViewlDlgTask, CRunToolDlgTask, COpenDlgTask, CMultiAligner, CSplign, CNWAligner, CMMAligner
- x_RunAligner()
: CInstancedAligner
- x_RunBanded()
: CSimpleBandedAligner
- x_RunBandedGlobal()
: CSimpleBandedAligner
- x_RunBtm()
: CMMAligner
- x_RunCleanup()
: CInstancedAligner
- x_RunCurrentSubTask()
: CBlastSearchTask, CCompositeAppTask, CProjectLoadingTask
- x_RunFastCGI()
: CCgiApplication
- x_RunMMGlobal()
: CInstancedAligner
- x_RunNewJob()
: CRemoteAppDispatcher
- x_RunOnCompartment()
: CSplign
- x_RunOnPair()
: CAppNWA
- x_RunSplign()
: CSplignApp
- x_RunTerm()
: CMMAligner
- x_RunTop()
: CMMAligner
- x_SafeToFinalize()
: CDBLibContext, CTLibContext
- x_SameTSE()
: CTSE_ScopeInfo
- x_Save()
: CProjectTask
- x_SaveAlignmentSettings()
: CAlignmentTrack
- x_SaveAlignSmearSettings()
: CAlignmentTrack
- x_SaveBlob()
: CDBAPI_CacheIWriter
- x_SaveConfig()
: CGBenchApplication
- x_SaveConfiguration()
: CSequenceTrack, CSegmentMapTrack, CGeneModelTrack, CAlignmentTrack
- x_SaveContextData()
: SDiagMessage
- x_SaveDataObject()
: CId2FetchApp
- x_SaveDefaultScoringMethod()
: CSeqGraphicWidget
- x_SaveDefaultWindowLayout()
: CGBenchGUI
- x_SaveFeatSettings()
: CSeqGraphicConfig
- x_SaveGuiRegistry()
: CGBenchFeedbackAgent, CGBenchApp, CwxNCBIApp
- x_SaveHistSettings()
: CSeqGraphicConfig
- x_SaveJobDescriptors()
: CNetBLASTUIDataSource
- x_SaveMatePairSettings()
: CAlignmentTrack
- x_SaveMultiAlignSettings()
: CAlignmentTrack
- x_SaveObjectOffset()
: CPdfObjectWriter
- x_SaveProfile_Recursive()
: CFeaturePanel
- x_SavePWAlignSettings()
: CAlignmentTrack
- x_SaveRemoved()
: CTSE_ScopeInfo
- x_SaveSettings()
: CwxSeqTextViewOptions, CSequenceSearchForm, COrfSearchForm, CFeatureSearchForm, CEntrezSearchForm, CCpgSearchForm, CDialog, CSixFramesTransTrack, CSequenceTrack, CSegmentMapTrack, CLayoutTrack, CGraphTrack, CGeneModelTrack, CFeatureTrack, CFeaturePanel, CEpigenomicsTrack, CAlignmentTrack, CwxChooseSeqDlg, CNetBLAST_DMSearchForm, CSearchFormBase, CRunToolDlg, CProjectSelectorDlg, COpenViewDlg
- x_SaveSplitterLayout()
: CDockContainer
- x_SaveStates()
: CSeqGraphicWidget, CGlWidgetBase
- x_SaveTrackSettingsRecursive()
: CFeaturePanel
- x_SaveViewSettings()
: CViewManagerService
- x_SaveWidgetValues()
: CwxAnnotConfigDlg, CAnnotConfigDlg
- x_ScaleToFitLimits()
: CGlPane
- x_ScaleToNorm()
: CMouseZoomHandler, CMinimapHandler
- x_ScanTotals()
: CSeqDBImpl
- x_SchedQueueChanged()
: CScheduler_MT
- x_ScheduleTask_OnThread()
: CSchedulerEngine
- x_Scope()
: CPromote
- x_Search()
: CElementaryMatching
- x_SearchAll()
: CAnnot_Collector
- x_SearchComponents()
: CFeatureSearchJob
- x_SearchDataNumeric()
: CSeqDBIsam
- x_SearchDataNumericMulti()
: CSeqDBIsam
- x_SearchErrors()
: CRemoteBlast
- x_SearchFeatures()
: CFeatureSearchJob
- x_SearchFirstAmbiguousPosition()
: oligofar::fourplanes::CHashIterator
- x_SearchIndexNumeric()
: CSeqDBIsam
- x_SearchIndexNumericMulti()
: CSeqDBIsam
- x_SearchInProgress()
: CDataMiningPanel
- x_SearchLoc()
: CAnnot_Collector
- x_SearchMapped()
: CAnnot_Collector
- x_SearchMaster()
: CAnnot_Collector
- x_SearchNegativeMulti()
: CSeqDBIsam
- x_SearchObjects()
: CAnnot_Collector
- x_SearchRange()
: CAnnot_Collector
- x_SearchSegments()
: CAnnot_Collector
- x_SearchSequence()
: CSequenceSearchJob
- x_SearchTSE()
: CAnnot_Collector
- x_SearchTSE2()
: CAnnot_Collector
- x_Second()
: CTimeSpan
- x_SecondRowFits()
: CAlnMixMerger
- x_SeekCURR()
: CMemStore
- x_SeekHEAD()
: CMemStore
- x_SeekTAIL()
: CMemStore
- x_Select()
: CSeqMap_CI, CSeq_entry_Info
- x_SelectAll()
: CSelectionControl
- x_SelectBaseStep()
: CCrossPanelIR
- x_SelectBestTaxid()
: CTaxIdSet
- x_SelectByPoint()
: IPhyloTreeRenderer, CHitMatrixGraph
- x_SelectByRect()
: CSeqGraphicPane, IPhyloTreeRenderer, CHitMatrixGraph
- x_SelectClients()
: CWindowsDlg
- x_SelectCompatibleInputObjects()
: CCreateNeedlemanWunschToolManager, CAutodefToolManager, CWindowMaskerTool, CCleanupTool, CTreeBuilderTool, CSplignTool, CMergeAlignmentsToolManager, CGroupAlignmentsToolManager, CFindOverlapTool, CCreateGeneModelToolManager, CCleanupAlignmentsToolManager, CBLASTToolManagerBase
- x_SelectFocusedItem()
: CSelectionControl, CSelListController< Item >
- x_SelectGraph()
: CwxHistogramDlg
- x_SelectionUpdated()
: CFilterDialog
- x_SelectItem()
: CSelectionControl, CSelListModelImpl< Item >, CAlnMultiModel
- x_SelectItems()
: CSelectionControl
- x_SelectManager()
: COpenDlg
- x_SelectPaper()
: CPrintOptionsDlg
- x_SelectProjectByParams()
: CProjectSelectorPanel
- x_SelectRows()
: CMultiAlignView
- x_SelectSeq()
: CScope_Impl
- x_SelectSet()
: CScope_Impl
- x_SelectSingleItem()
: CSelectionControl
- x_SelectTo()
: CSelectionControl, CSelListController< Item >
- x_SelfCleanup()
: CSafeStaticRef< T >, CSafeStaticPtr< T >, CAutoInitRef< T >, CAutoInitPtr< T >
- x_Send()
: CStatement
- x_SendCommand()
: CSeqTextPane, CPhyloTreePane, CAlnMultiPane
- x_SendData()
: CODBC_Connection, CDBL_Connection, CTL_CmdBase, CTL_Connection
- x_SendDataChangedEvent()
: CEditCommand
- x_SendJobCmdWaitResponse()
: SNetScheduleAPIImpl
- x_SendPacket()
: CId2ReaderBase, CId2Reader
- x_SendRequest()
: CId1Reader, CRemoteBlast
- x_SendRequestPacket()
: CId2FetchApp
- x_SendSelectionEvent()
: CSelectionControl, CMapControl
- x_SeparateByTaxId()
: CAlignGroup
- x_SeparateObjects()
: CLayeredLayout
- x_Seq2Lim1()
: CCrossPanelIR
- x_Seq2Lim2()
: CCrossPanelIR
- x_SeqDescMatch()
: CCleanup_imp
- x_SeqDragPos()
: CSeqMarkHandler
- x_SeqIdToGiNumber()
: CValidError_feat, CCleanupApp, CAsn2FlatApp, CAsn2FastaApp
- x_SeqLoc_To_DeltaExt()
: CBioseq
- x_SeqToProduct()
: CCdsGlyph
- x_Serialize()
: CFeatureCheckDialog
- x_SerializeBitVector()
: CNetScheduleHandler, CBDB_BvSplitDictStore< Key, Dictionary, BvStore, BV >
- x_Set()
: CMaskedRangeSet, CDonorAcceptorMatrix, CSeq_annot_Handle, CScopeTransaction, CwxClipboardHelper< wxBitmap >, CwxClipboardHelper< wxString >, CwxClipboardHelper< T >, CCompoundRWRegistry, CTwoLayerRegistry, CMemoryRegistry, IRWRegistry, CEnvironmentRegistry
- x_SetActiveClient()
: CWindowManager
- x_SetAlgoOpts()
: CRemoteBlast
- x_SetAnnot()
: CBioseq_Base_Info
- x_SetAnnotObjs()
: CTSE_Info
- x_SetArgs()
: CUrl
- x_SetBaseName()
: CMasterContext
- x_SetBiomol()
: CLocusItem, CAutoDefFeatureClause
- x_SetBioseq_setId()
: CTSE_Info
- x_SetBioseqChunkId()
: CTSE_Split_Info, CSeq_entry_Info
- x_SetBioseqId()
: CTSE_Info
- x_SetBioseqIds()
: CTSE_Info
- x_SetBioSrc()
: CDeflineGenerator
- x_SetBit()
: CSeqDBBitVector
- x_SetBlobRequest()
: CId1Reader
- x_SetBounds()
: CSeqDBMapStrategy
- x_SetBrowserRegion()
: CReaderBase
- x_SetByteSwapped()
: CBDB_File, CBDB_RawFile
- x_SetChanged()
: CSeqMap
- x_SetChangedSeqMap()
: CBioseq_Info
- x_SetChars()
: CAlnVecPrinter
- x_SetChoice()
: CSeqdesc_CI
- x_SetChoices()
: CSeqdesc_CI
- x_SetChunk()
: CSeqMap
- x_SetClearStatusNoLock()
: CJobStatusTracker
- x_SetClient()
: CDockPanel
- x_SetClientIpProperty()
: CCgiRequest
- x_SetComment()
: CCommentItem, CCompoundRWRegistry, CTwoLayerRegistry, CMemoryRegistry, IRWRegistry, CEnvironmentRegistry
- x_SetCommentWithURLlinks()
: CCommentItem
- x_SetConnAttributesBefore()
: CODBC_Connection
- x_SetContainedId()
: CTSE_Split_Info
- x_SetContext()
: CFlatItem
- x_SetContextData()
: CId2ReaderBase
- x_SetCurrentEntry()
: CSeq_entry_I, CSeq_entry_CI
- x_SetCurrentFormat()
: CFileLoadOptionPanel
- x_SetCurrentPanel()
: CRunToolDlg, COpenViewDlg, COpenDlg
- x_SetCurrHandler()
: CGlWidgetPane
- x_SetCursor()
: CTextSelHandler, CLinearSelHandler
- x_SetDatabase()
: CRemoteBlast
- x_SetDataBases()
: CNetBLASTUIDataSource
- x_SetDataHandle()
: CProjectView
- x_SetDate()
: CLocusItem, CStartItem
- x_SetDBLoadJobId()
: CNetBLASTUIDataSource
- x_SetDeflinesFromBinary()
: CWriteDB_Impl
- x_SetDescr()
: CBioseq_set_Info, CBioseq_Info, CBioseq_Base_Info
- x_SetDetails()
: CId2ReaderBase
- x_SetDimensions()
: CMedia
- x_SetDirtyAnnotIndex()
: CTSE_Info_Object, CDataSource
- x_SetDirtyAnnotIndexNoParent()
: CTSE_Info_Object, CTSE_Info
- x_SetDivision()
: CLocusItem
- x_SetEntries()
: CSelListModelImpl< Item >, CAlnMultiModel
- x_SetEntry()
: CSeqdesc_CI, CSeq_annot_CI
- x_SetExclude_blobs()
: CId2ReaderBase
- x_SetFeatureDisplayData()
: CMicroArrayReader
- x_SetFeatureInfo()
: CDisplaySeqalign
- x_SetFeatureLocation()
: CMicroArrayReader
- x_SetFieldDelimiter()
: CBlastTabularInfo
- x_SetFieldsToShow()
: CBlastTabularInfo
- x_SetFileType()
: CSeqDBExtFile
- x_SetFinishStatus()
: CLayoutTrack
- x_SetFlag()
: CNCMessageHandler
- x_SetFlags()
: CAlignRangeCollection< TAlnRange >, CDeflineGenerator
- x_SetFont()
: CFontDemoUI
- x_SetFormat()
: SDiagMessage
- x_SetFragment()
: CUrl
- x_Setg()
: CCgiIbuffer
- x_SetGi()
: CSeq_annot_SNP_Info
- x_SetGraphs()
: CHitMatrixRenderer
- x_SetHandler()
: CFileDiagHandler
- x_SetHaveSequence()
: CWriteDB_Impl
- x_SetHost()
: CUrl
- x_SetHoverPos()
: CTextSelHandler
- x_SetHttpMethod()
: CEUtilsApp
- x_SetId()
: CBioseqContext
- x_SetIdleState()
: CThreadPool_ThreadImpl
- x_SetIdObjects()
: CTSE_Info
- x_SetIndexString()
: CCgiArgs_Parser
- x_SetItemData()
: CThemeConfigPanelBase
- x_SetItems()
: CSelectionControl
- x_SetJobKey()
: CGridJobStatus
- x_SetLastTruncated()
: CSeq_loc_Mapper_Base
- x_SetLayoutLevel()
: CFeaturePanel
- x_SetLength()
: CLocusItem
- x_SetLinkAndMbit()
: CBuildDatabase
- x_SetLoadedState()
: CThemeDlg
- x_SetLoadLock()
: CDataSource
- x_SetLocation()
: CBioseqContext
- x_SetLock()
: CScopeInfo_Base, CDataSource
- x_SetMapper()
: CBioseqContext
- x_SetMaskingLocationsForQueries()
: CRemoteBlast
- x_SetMatch()
: CDataSource_ScopeInfo
- x_SetMate()
: oligofar::CSRead
- x_SetMinusStrand()
: IBlastSeqVector, CBlastSeqVectorOM, CBlastSeqVectorFromCSeq_data
- x_SetModifiedFlag()
: CCompoundRWRegistry, CTwoLayerRegistry, CCompoundRegistry, CMemoryRegistry, IRegistry, CEnvironmentRegistry
- x_SetMolInfoTechForConflictCDS()
: CCleanup_imp
- x_SetMsg()
: CAlignmentTrack
- x_SetMultiMode()
: CMultiFileInput
- x_SetName()
: CLocusItem, CNamedPipe
- x_SetNamedScore()
: CSeq_align
- x_SetNeedUpdate()
: CTSE_Info_Object
- x_SetNeedUpdateContents()
: CSeq_entry_Info
- x_SetNeedUpdateParent()
: CTSE_Info_Object, CBioseq_Base_Info
- x_SetNoComma()
: CAsnRetrieveJob
- x_SetNon_locking()
: CPrefetchTokenOld_Impl
- x_SetNoParent()
: CFeatTree
- x_SetNotCachedPartId()
: CNCBlobStorage
- x_SetNumParts()
: CMasterContext
- x_SetObjAnnot()
: CBioseq_set_Info, CBioseq_Info, CBioseq_Base_Info
- x_SetObject()
: CFlatItem, CSeqMap, CSeq_entry_Info, CSeq_annot_Info, CBioseq_set_Info, CBioseq_Info, CAnnotObject_Info
- x_SetObjectPos()
: CLayeredLayout, CColumnLayout
- x_SetOneParam()
: CBlastOptionsRemote, CRemoteBlast
- x_SetOwner()
: CThreadPool_Task
- x_SetPageHitId()
: CCgiRequest
- x_SetParam()
: CBlastOptionsRemote
- x_SetParams()
: CId1Reader
- x_SetParent()
: CFeatTree
- x_SetParentDirtyAnnotIndex()
: CTSE_Info_Object
- x_SetPassword()
: CUrl
- x_SetPath()
: CUrl
- x_SetPathHooks()
: CObjectOStream, CObjectIStream, CObjectStack
- x_SetPattern()
: CSplign
- x_SetPlusStrand()
: IBlastSeqVector, CBlastSeqVectorOM, CBlastSeqVectorFromCSeq_data
- x_SetPort()
: CUrl
- x_SetPortLimits()
: CGlWidgetDemo, CSeqTextWidget, CSeqGraphicWidget, CPhyloTreeWidget, CHitMatrixWidget, CGlWidgetBase, CAlnMultiWidget, CCrossAlnWidget
- x_SetPos()
: CSeqVector_CI
- x_SetPrefix()
: CDeflineGenerator
- x_SetProducts()
: CGFFReader
- x_SetProjectFilename()
: CWorkspacePrx
- x_SetProp()
: CRequestContext
- x_SetQuoteFlags()
: CBDB_FileDumper
- x_SetRawSegType()
: CAlnMap
- x_SetRawSegTypes()
: CAlnMap
- x_SetRegion()
: CSeqDBMemLease
- x_SetRegistry()
: CGuiRegistry, CODBCContext, CDBLibContext, CTLibContext
- x_SetResolve()
: CId2ReaderBase
- x_SetRootWindow()
: CDockContainer
- x_SetRulerText()
: CSeqTextPane, CHitMatrixRenderer
- x_SetScheme()
: CUrl
- x_SetScoreMatrix()
: CMultiAligner
- x_SetScoringMethod()
: CAlnMultiWidget
- x_SetScrollPosition()
: CSeqTextWidget
- x_SetSearchPath()
: CMetaRegistry
- x_SetSegment()
: CSeqMap
- x_SetSegmentData()
: CSeqMap
- x_SetSegmentGap()
: CSeqMap
- x_SetSegmentRef()
: CSeqMap
- x_SetSelectedIds()
: CwxChooseSeqDlg
- x_SetSelectedTasks()
: CTaskTablePanel
- x_SetSelections()
: CFeatureCheckPanel, CProjectTreePanel
- x_SetSeq_data()
: CSeqMap
- x_SetSeqFeatProduct()
: CPromote
- x_SetSeqFrame()
: CAlnMixMerger
- x_SetSession()
: CCgiResponse, CCgiRequest
- x_SetSetsCurrentStyleKey()
: CThemeSet
- x_SetShowDisplayLevel()
: CFeaturePanel
- x_SetSingleMode()
: CMultiFileInput
- x_SetSkip()
: CFlatItem, CCommentItem
- x_SetSNP_annot_Info()
: CSeq_annot_Info
- x_SetSource()
: CSourceItem
- x_SetStartStatus()
: CLayoutTrack
- x_SetState()
: CNCMessageHandler, CwxTreeCtrlEx, CMenuItem
- x_SetStates()
: CThemeDlg
- x_SetStatus()
: CBlockingQueue< TRequest >::CQueueItem, CQueueItemBase, CThreadPool_Task, CLayoutTrack
- x_SetStatusText()
: CAppJob, CNetBlastMonitoringJob, CNetBlastSubmittingJob
- x_SetStrand()
: CBlastSeqVectorOM, CLocusItem
- x_SetStream()
: CRPCClient< TRequest, TReply >
- x_SetSubjectRangesForPartialFetching()
: CBlastTracebackSearch
- x_SetSubSeqMap()
: CSeqMap
- x_SetSuffix()
: CDeflineGenerator
- x_SetTaskCompleted()
: CTaskProgressReporter
- x_SetTaskName()
: CTaskProgressReporter
- x_SetTaskTotal()
: CTaskProgressReporter
- x_SetText()
: CMessageSlot
- x_SetTime()
: CTime
- x_SetTimeMTSafe()
: CTime
- x_SetTimestamp()
: CSQLITE3_Cache
- x_Settle()
: CSeqdesc_CI, CSeq_annot_ftable_I, CSeq_annot_ftable_CI, CSeq_descr_CI, CSeq_annot_CI, CBioseq_CI
- x_SettleNext()
: CSeqMap_CI
- x_SettlePrev()
: CSeqMap_CI
- x_SetTopology()
: CLocusItem
- x_SetTotalLoc()
: CWig2tableApplication
- x_SetTrackData()
: CWiggleReader, CReaderBase, CMicroArrayReader
- x_SetTrackDataToSeqEntry()
: CGff3Reader
- x_SetTransaction()
: CBDB_RawFile
- x_SetTSE_Lock()
: CTSE_ScopeInfo
- x_Setup()
: CSeqDBOIDList, CPhyloTreeFilterDlg
- x_SetupArgDescriptions()
: CGBenchFeedbackAgentApp, CGBenchApplication, CNCBIwxApplication
- x_SetupArgs()
: CCgiSampleApplication, CGridCgiSampleApplication, CCgiSampleApplication, CCgiTunnel2Grid, CCgi2RCgiApp
- x_SetupAxes()
: CPhyloTreePane, CHitMatrixRenderer
- x_SetupBlastOptions()
: CSplignApp
- x_SetupBoostReporters()
: CNcbiTestApplication
- x_SetupColumns()
: CSequenceSearchJob, COrfSearchJob, CFeatureSearchJob, CCpgSearchJob, CComponentSearchJob, CSearchJobBase
- x_SetupContext()
: CAlnMultiHeaderHandler
- x_SetupErrorReporter()
: CODBC_Connection
- x_SetupGapAlign()
: CTracebackTestFixture
- x_SetupGLContext()
: CGLCanvas
- x_SetupGraphTypes()
: CHitMatrixRenderer
- x_SetupHSPList()
: CPhiblastTestFixture
- x_SetupMain()
: CTracebackTestFixture
- x_SetupModelLimits()
: CCrossAlnRenderer, CSeqGraphicRenderer
- x_SetupPatternInfo()
: CPhiblastTestFixture
- x_SetupResults()
: CPhiblastTestFixture
- x_SetupScene()
: CGl3dWindow
- x_SetupSeqFeat()
: CFeature_table_reader_imp
- x_SetupSequenceBlk()
: CPhiblastTestFixture
- x_SetupStatusBar()
: CGBenchGUI, CwxMainFrame
- x_SetupStdio()
: CNcbiApplication
- x_SetupTabs()
: CSnpFilterUI
- x_SetupViewPorts()
: CCrossAlnRenderer, CSeqGraphicRenderer
- x_SetUser()
: CUrl
- x_SetValue()
: CTlsBase
- x_SetValues()
: oligofar::CHit
- x_SetVector()
: CSeqVector_CI
- x_SetVisibleRange()
: CSnpTableView, CFeatTableView
- x_ShiftToFitLimits()
: CGlPane
- x_ShouldRetry()
: CRPCClient< TRequest, TReply >
- x_ShowConfigFile()
: CCgiSessionSampleApplication
- x_ShowContextMenu()
: CDockPanel
- x_ShowDecoratedPopupMenu()
: CGlWidgetBase
- x_ShowIcon()
: CLayoutTrack
- x_ShowPopup()
: CMessageSlot
- x_ShowSingletonView()
: CGBenchGUI, CFrameworkDemoGUI
- x_ShowTitle()
: CLayoutTrack
- x_ShowToolBar()
: CWindowManagerService
- x_ShowTrack()
: CTrackContainer
- x_ShowTypewordFirst()
: CAutoDefFeatureClause
- x_ShrinkCell()
: CSplitter
- x_Shutdown()
: CNetCacheWriter
- x_ShutDownServices()
: CWorkbench
- x_ShutDownToolBars()
: CWindowManagerService
- x_SimpleLayout()
: CAlignedFeatureGraph
- x_SimpleMatch()
: CSelectionEvent
- x_SimpleSort()
: CPointerPot
- x_SimplifyTSeqLocVector()
: CBl2Seq
- x_Size()
: IBlastSeqVector, CBlastSeqVectorOM, CBlastSeqVectorFromCSeq_data
- x_SizesToSplitPositions()
: CSplitter
- x_SkeletalTestResult()
: CSeqTest
- x_Skip()
: CTar
- x_SkipClass()
: CBioseq_CI
- x_SkipFeature()
: CFlatGatherer
- x_SkipTag()
: CPhrapReader
- x_SkipType()
: CAlnMap
- x_SkipWS()
: CWig2tableApplication
- x_SlideToHit()
: CCpGIslands
- x_SmearBtnClicked()
: CAnnotConfigDlg
- x_SoftUpdate()
: CPhyloTreeWidget
- x_Sort()
: CAnnot_Collector
- x_SortAndUnique()
: CSeqDBIdSet
- x_SortChunkPtrs()
: CNCMMReserve
- x_SortDescriptions()
: CAutoDefSourceGroup
- x_SortModifierListByRank()
: CAutoDef
- x_SortRows()
: CAlnMultiModel
- x_SortSegs()
: CSeq_align_Mapper_Base
- x_SparseStringToOids()
: CSeqDBIsam
- x_Split()
: CSplitter
- x_SplitAligns()
: CSplitDataLoader
- x_SplitAnnot()
: CSplitDataLoader
- x_SplitAttach()
: CTSE_Chunk_Info
- x_SplitDescr()
: CSplitDataLoader
- x_SplitFeats()
: CSplitDataLoader
- x_SplitGraphs()
: CSplitDataLoader
- x_SplitKeyValuePair()
: CGFFReader
- x_SplitPositionsToSizes()
: CSplitter
- x_SplitQualifyingHits()
: CSplign
- x_SplitSeq()
: CSplitDataLoader
- x_SplitSeqAlign()
: CBlastFormat
- x_SplitSeqData()
: CSplitDataLoader
- x_SplitSet()
: CSplitDataLoader
- x_StartCommand()
: CNCMessageHandler
- x_StartDecompressor()
: CNlmZipReader
- x_StartDrag()
: CSplitter
- x_StartEditing()
: CSeqMap
- x_StartFilterJob()
: CSnpTableModel
- x_StartJob()
: CFeatureGraph, CAppJobDispatcher
- x_StartLoadJob()
: CSnpTableModel
- x_StartMonitor()
: CGBenchApplication
- x_StartMoving()
: CLayoutTrackHandler
- x_StartOfWhat()
: CDB_Exception
- x_StartPlain()
: CNlmZipReader
- x_StartRead()
: CBDB_File
- x_StartReadingBlob()
: CNCMessageHandler
- x_StartRequest()
: CDiagContext
- x_StartRetrivingTask()
: CNetBlastMonitoringJob
- x_StartTask()
: CNetBLASTUIDataSource
- x_StartWriteGBSet()
: CGBSeqFormatter
- x_StartWritingBlob()
: CNCMessageHandler
- x_State()
: CFastaAlignmentBuilder
- x_StatisticsNew()
: CNetScheduleHandler
- x_StatusText()
: CAppTaskServiceSlot
- x_Step()
: CSeq_annot_ftable_I, CSeq_annot_ftable_CI, CSeq_descr_CI
- x_StopMonitor()
: CGBenchApplication
- x_StopMoving()
: CLayoutTrackHandler
- x_Store()
: CBDB_Cache
- x_StoreMerger()
: CMergeVolumes
- x_StorePattern()
: CSeqSearch
- x_StringIsJustQuotes()
: CFeature_table_reader_imp
- x_StringSearch()
: CSeqDBIsam
- x_StringToUTF8()
: CWString
- x_StripProtXrefs()
: CCleanup_imp
- x_StrOStreamToTextOStream()
: CGBSeqFormatter
- x_StrToPtr()
: CDebugDumpViewer
- x_SubmitSearch()
: CRemoteBlast
- x_Subtract()
: CRangeCollection< Position >
- x_SubtractFromFocus()
: CFlatGatherer
- x_SubtypeCleanup()
: CCleanup_imp
- x_SummarizeBooleanOp()
: CSeqDBIdSet
- x_SwapBits()
: oligofar::CBitHacks
- x_SwapCache()
: CSeqVector_CI
- x_SwitchCurrentDBPart()
: CNCBlobStorage
- x_SwitchToActiveState()
: CMouseZoomHandler
- x_SwitchToIdleState()
: CAlnMultiHeaderHandler
- x_SwitchToMoveMode()
: CAlnMultiHeaderHandler
- x_SwitchToReadyState()
: CMouseZoomHandler, CMinimapHandler
- x_SwitchToResizeMode()
: CAlnMultiHeaderHandler
- x_SwithToActiveState()
: CMinimapHandler
- x_SyncRegistryAndEnvironment()
: CGBenchApplication
- x_SyncSettings()
: CFeaturePanel
- x_SyncTableSettings()
: CDataMiningPanel
- x_SyncWithDir()
: CLDS_File
- x_TagCleanup()
: CCleanup_imp
- x_TaskFinished()
: CThreadPool_ThreadImpl
- x_TerminateEventMode()
: CStatusBarService
- x_TerminateHintMode()
: CStatusBarService
- x_TermValue()
: CAlignFilter
- x_TestAlignments()
: CHitMatrixDSBuilder, CAlnMultiDSBuilder
- x_TestAllCdregions()
: CSeqTest
- x_TestAndSelectAlign()
: CHitMatrixDataSource
- x_TestAndSelectAligns()
: CHitMatrixDataSource
- x_TestCContextTranslator()
: CSplitQueryTestFixture
- x_TestFormat()
: CFormatGuess
- x_TestForNode()
: IPhyloTreeRenderer
- x_TestGuiRegistry()
: CGBenchApplication
- x_TestHits()
: CPhyloTreeCGIApplication
- x_TestInput()
: CFormatGuess
- x_TestLocalStrand()
: CSequenceDataTester
- x_TestLowerCaseMaskWith()
: CBlastFilterTest
- x_TestNumericSample()
: CSeqDBIsam
- x_TestRangeList()
: CVecscreenTest
- x_TestSeqalign()
: CVecscreenTest
- x_TestSingleNucleotide_Local()
: CSequenceDataTester
- x_TestSingleNucleotide_Remote()
: CSequenceDataTester
- x_TestSingleProtein_Local()
: CSequenceDataTester
- x_TestSingleProtein_Remote()
: CSequenceDataTester
- x_TestSingleSequence_Local()
: CSequenceDataTester
- x_TestSingleSequence_Remote()
: CSequenceDataTester
- x_TestSingleTranslatedNucl_Local()
: CSequenceDataTester
- x_TextAlongAxis()
: CRuler
- x_TextPosChanged()
: CTextItemPanel
- x_Throw()
: CSQLITE3_Statement
- x_ThrowException()
: CDll
- x_ThrowExceptionOnLogicError()
: CPsiBlastIterationState
- x_ThrowNotValid()
: CSeq_loc_CI
- x_ThrowOutOfRange()
: CSeqVector_CI
- x_ThrowSanityCheck()
: CException
- x_ThrowUnsetValue()
: CTableFieldHandle_Base, CSeqTableColumnInfo
- x_Throwx()
: CBlastOptionsRemote, CBlastOptions
- x_TimeLineSlot()
: CTimeLine< BV >
- x_Title()
: CGenbankFormatter
- x_TitleFromBioSrc()
: CDeflineGenerator
- x_TitleFromNC()
: CDeflineGenerator
- x_TitleFromNM()
: CDeflineGenerator
- x_TitleFromNR()
: CDeflineGenerator
- x_TitleFromPatent()
: CDeflineGenerator
- x_TitleFromPDB()
: CDeflineGenerator
- x_TitleFromProtein()
: CDeflineGenerator
- x_TitleFromSegSeq()
: CDeflineGenerator
- x_TitleFromWGS()
: CDeflineGenerator
- x_ToArchiveName()
: CTar
- x_ToCString()
: CString2Args
- x_ToDisplay()
: CRuler
- x_ToFilesystemPath()
: CTar
- x_Tokenize()
: CSeqDBAliasNode
- x_TokenizeCmdLine()
: CString2Args
- x_TokenizeFilteringArgs()
: CFilteringArgs
- x_ToLower()
: CWriteDB_IsamIndex
- x_ToModel()
: CRuler
- x_TopBlank()
: CSeqTextPane
- x_TopNext()
: CSeqMap_CI
- x_TopPrev()
: CSeqMap_CI
- x_ToSphere()
: CGlArcBall
- x_ToUserObject()
: CDockContainer, CBLASTParams
- x_Traceback()
: CTracebackSearchTestFixture
- x_TransferFlags()
: CMergeAlignmentsParamsPanel
- x_TransferResults()
: CScoreCache, CSearchJobBase
- x_Transform()
: CSeqFormatter
- x_Translate()
: CSFTranslationJob, CAnalysisFileLoader
- x_TranslateFacility()
: CSysLog
- x_TranslateFlags()
: CSysLog
- x_TranslateFromUserList()
: CSeqDBGiListSet
- x_TranslateGisFromUserList()
: CSeqDBGiListSet
- x_TranslateOffsets()
: CSubjectRangesSet
- x_TranslateTisFromUserList()
: CSeqDBGiListSet
- x_Trim()
: CGBUserTypeParent_CI
- x_TrimMatrix()
: CGuideTreeCalc
- x_tRNAClauseFromNote()
: CAutoDef
- x_Truncate()
: CGlBitmapFont
- x_TruncateDB()
: CDBAPI_Cache, CBDB_Cache
- x_TruncateOverlaps()
: CMergedPairwiseAln
- x_TryGetDouble()
: CWig2tableApplication
- x_TryGetDoubleSimple()
: CWig2tableApplication
- x_TryGetPos()
: CWig2tableApplication
- x_TryInit()
: CNcbiApplication
- x_TryMain()
: CNcbiApplication
- x_TryPlaceCDSFeature()
: CAlignedFeatureGraph
- x_TSEAttach()
: CTSE_Split_Info, CTSE_Info_Object, CTSE_Chunk_Info
- x_TSEAttachContents()
: CTSE_Info_Object, CSeq_entry_Info, CSeq_annot_Info, CBioseq_set_Info, CBioseq_Info, CBioseq_Base_Info
- x_TSEDetach()
: CTSE_Split_Info, CTSE_Info_Object
- x_TSEDetachContents()
: CTSE_Info_Object, CSeq_entry_Info, CSeq_annot_Info, CBioseq_set_Info, CBioseq_Info, CBioseq_Base_Info
- x_Tuneup()
: CFastLocalTime
- x_Type()
: ASNParser, DTDParser
- x_Uncache()
: CSettingsSet
- x_UncacheAll()
: CSettingsSet
- x_UnderlineInterval()
: CSeqTextPane
- x_UngetLine()
: CWig2tableApplication
- x_UngetTag()
: CPhrapReader
- x_UnhideFullContainer()
: CDockContainer
- x_Unindex()
: CSeq_id_PDB_Tree, CSeq_id_Patent_Tree, CSeq_id_Giim_Tree, CSeq_id_General_Tree, CSeq_id_Local_Tree, CSeq_id_Textseq_Tree, CSeq_id_Gi_Tree, CSeq_id_int_Tree, CSeq_id_not_set_Tree, CSeq_id_Which_Tree
- x_UnindexAnnotTSE()
: CTSE_Info, CDataSource
- x_UnindexAnnotTSEs()
: CDataSource
- x_UnindexBioseq()
: CTSE_ScopeInfo
- x_UnindexSeqTSE()
: CTSE_Info, CDataSource
- x_UnindexTSE()
: CDataSource_ScopeInfo, CDataSource
- x_Unlink()
: CNCMMReserve
- x_UnloadData()
: CProjectPrx
- x_UnLoadProjects()
: CProjectTask
- x_Unlock()
: CSyncQueue< Type, Container >, CTSE_Lock
- x_UnlockInstanceGuard()
: CNCBlobStorage
- x_Unmap()
: CDataSource
- x_UnmapAnnotObject()
: CTSE_Info, CSeq_annot_Info
- x_UnmapAnnotObjects()
: CTSE_Info, CSeq_annot_SNP_Info, CSeq_annot_Info
- x_UnmapFeatByGene()
: CSeq_annot_Info
- x_UnmapFeatById()
: CTSE_Info, CSeq_annot_Info
- x_UnmapFeatByLocus()
: CTSE_Info
- x_UnmapFeatIds()
: CSeq_annot_Info
- x_UnmapMemFiles()
: CGeneInfoFileReader
- x_UnmapSNP_Table()
: CTSE_Info
- x_UnpackData()
: CImageIOGif
- x_UnregisterBioObject()
: CTSE_Info
- x_UnRegisterClient()
: CWindowManager
- x_UnregisterHandler()
: CGlWidgetPane
- x_UnRegisterTools()
: CDataMiningService
- x_UnsetChars()
: CAlnVecPrinter
- x_UnsetFlag()
: CNCMessageHandler
- x_UnsetProp()
: CRequestContext
- x_Update()
: CPageHandler, CAppTaskServiceSlot, CChecksum, CTSE_Info_Object, CClockPanelWMClient, CSnpTableData, CSeqTextWidget, CSeqGraphicWidget, CPhyloTreeWidget, CHitMatrixWidget, CGlWidgetBase, CCrossAlnWidget, CSnpTableView, CSnpTableModel, CFeatTableView, CAlignSpanView
- x_UpdateAccessTime()
: CDBAPI_Cache, CBDB_Cache
- x_UpdateActiveClient()
: CWindowManager
- x_UpdateAddBtn()
: CObjectListWidgetSel
- x_UpdateAnnotIndex()
: CTSE_Split_Info, CTSE_Info_Object, CTSE_Chunk_Info
- x_UpdateAnnotIndexContents()
: CTSE_Info_Object, CTSE_Info, CTSE_Chunk_Info, CSeq_annot_SNP_Info, CSeq_entry_Info, CSeq_annot_Info, CBioseq_set_Info, CBioseq_Base_Info
- x_UpdateBlob()
: CDBAPI_Cache
- x_UpdateBoundingBox()
: CDummyTrack, CDummyGlyph, CVisRangeGlyph, CTranslationGlyph, CSwitchPointGlyph, CSequenceTrack, CSegmentGlyph, CSeqGlyph, CMatePairGlyph, CLayoutTrack, CLayoutGroup, CHistogramGlyph, CGlyphContainer, CRnaCdsGroup, CFeatGlyph, CCommentGlyph, CClonePlacementGlyph, CCdsGlyph, CAlignSmearGlyph, CAlignGlyph, CLDBlockGlyph, CGwasGlyph, CBinsGlyph
- x_UpdateBrowser()
: CSnpFilterListDialog
- x_UpdateBuffer()
: CScoringJob
- x_UpdateButtons()
: CWindowsDlg, CRunToolDlg, COpenViewDlg, COpenDlg
- x_UpdateCacheDown()
: CSeqVector_CI
- x_UpdateCacheUp()
: CSeqVector_CI
- x_UpdateChoices()
: CTrackCreatorUI
- x_UpdateCollapsedState()
: CBLAST_DB_Dialog
- x_UpdateCombo()
: CAdvancedFileInput
- x_UpdateComplete()
: CTSE_Info_Object
- x_UpdateConfig()
: CwxSettingsDlg
- x_UpdateContentLabel()
: CProjectViewBase
- x_UpdateCore()
: CTSE_Split_Info, CTSE_Info_Object
- x_UpdateData()
: CAnnotCompareFilterDlg, CTrackContainer, CSixFramesTransTrack, CSegmentMapTrack, CGraphTrack, CGeneModelTrack, CFeatureTrack, CEpigenomicsTrack, CDataTrack, CAlignmentTrack, CSnpTrack, CLDBlockTrack, CHapmapTrack, CGapTrack, CBinsTrack
- x_UpdateDataSourceTree()
: CAppExplorerService
- x_UpdateDB_GetJobNoLock()
: CQueue
- x_UpdateDB_PutResultNoLock()
: CQueue
- x_UpdateDelta()
: CAlignMarkHandler
- x_UpdateDescription()
: CScoreMethodsDlg, CScoringMethodsDlg
- x_UpdateElement()
: CCache< TKey, TValue, THandler, TLock, TSize >
- x_UpdateFileList()
: CSequenceSearchForm
- x_UpdateFilterStatusText()
: CBLAST_DB_Dialog
- x_UpdateGiInSeqalign()
: CSeqAlignFilter
- x_UpdateGraphColor()
: CHitMatrixRenderer
- x_UpdateHandleSeq_id()
: CScope_Impl
- x_UpdateId()
: CSeq_loc
- x_UpdateIds()
: CGffLoadTask
- x_UpdateItems()
: CSelectionControl, CMapControl, CAppExplorerService
- x_UpdateItemsRange()
: CSelectionControl, CMapControl
- x_UpdateItemToIndex()
: CSelectionControl
- x_UpdateKozak()
: COrfSearchForm
- x_UpdateLayout()
: CDockMarkerWindow, CDataTrack, CSnpTrack, CLDBlockTrack, CHapmapTrack, CGapTrack, CBinsTrack
- x_UpdateListBox()
: CSnpFilterListDialog
- x_UpdateListener()
: CWindowManager
- x_UpdateLoadedSet()
: CId2ReaderBase
- x_UpdateLocation()
: CDataMiningView
- x_UpdateMappingByPane()
: CRuler
- x_UpdateMapWidget()
: CItemSelectionPanel
- x_UpdateMarks()
: CAlignMarkHandler
- x_UpdateMessageField()
: CStatusBarService
- x_UpdateMinScale()
: CAlnMultiModel
- x_UpdateMsg()
: CTrackContainer
- x_UpdateName()
: CSeq_annot_Info
- x_UpdateNBRect()
: CBaseTextOStream
- x_UpdateNcbipnaScore()
: oligofar::CQueryHash
- x_UpdateNcbiqnaScore()
: oligofar::CQueryHash
- x_UpdateObjectKeys()
: CSeq_annot_Info
- x_UpdateObserversNow()
: CObservable
- x_UpdateOnCoordsChanged()
: CAlnMultiModel
- x_UpdateOnDataChanged()
: CAlnMultiWidget, CAlnMultiModel
- x_UpdateOnRowHChanged()
: CAlnMultiWidget
- x_UpdateOnStylesChanged()
: CAlnMultiWidget
- x_UpdateOnSwitchMaster()
: CAlnMultiWidget
- x_UpdateOnVisibilityChanged()
: CAlnMultiModel
- x_UpdateOnZoom()
: CCrossAlnPane, CGlWidgetBase, CAlnMultiWidget
- x_UpdateOptions()
: CPrintOptionsDlg, CSaveImageDlg, CPrintDlg
- x_UpdateOwnerStatOnDelete()
: CBDB_Cache
- x_UpdatePageTreeRoot()
: CPageHandler
- x_UpdatePane()
: CSeqTextWidget, CSeqGraphicWidget, CPhyloTreeWidget, CHitMatrixWidget, CCrossAlnWidget
- x_UpdatePanelFont()
: CTextPanel
- x_UpdatePos()
: CBaseTextOStream
- x_UpdatePosLabelsStep()
: CRuler
- x_UpdatePreferredHeights()
: CMapItem
- x_UpdateProgress()
: CTrackCreatorUI
- x_UpdateProject()
: CAppExplorerService
- x_UpdateProject_Views()
: CAppExplorerService
- x_UpdateProjectFolder()
: CAppExplorerService
- x_UpdateProjectFolder_Folders()
: CAppExplorerService
- x_UpdateProjectFolder_Items()
: CAppExplorerService
- x_UpdateProjectItem()
: CAppExplorerService
- x_UpdateProjectMatrices()
: CGlPane
- x_UpdateProjectWindowsFolder()
: CAppExplorerService
- x_UpdateQualifiers()
: CFeatureCreateDialog
- x_UpdateReadAccessTime()
: CBDB_Cache
- x_UpdateRegion()
: CSplitter
- x_UpdateRowHeight()
: CAlnVecRow
- x_UpdateScoreMap()
: CHitMatrixDataSource
- x_UpdateScrollbars()
: CSeqTextWidget, CGlWidgetBase
- x_UpdateSeg()
: CSeqVector_CI
- x_UpdateSelectedRow()
: CwxPhyloEditDlg
- x_UpdateSelection()
: CAlignMarkHandler
- x_UpdateSelectionScope()
: CDataMiningView
- x_UpdateSeq_feat()
: SSNP_Info
- x_UpdateSeq_featData()
: SSNP_Info
- x_UpdateSeq_inst()
: CSeqMap
- x_UpdateSetBtns()
: CEditStylesDlg
- x_UpdateState()
: CAlignMarkHandler
- x_UpdateStatusMessage()
: CFeatTableView, CAlignSpanView
- x_UpdateStyleColumns()
: CAlnMultiWidget
- x_UpdateTable()
: CWindowsDlg
- x_UpdateThemeOptions()
: CwxSettingsDlg
- x_UpdateThemes()
: CwxSettingsDlg
- x_UpdateTitle()
: COpenDlg
- x_UpdateToolbar()
: CTextPanel
- x_UpdateToolCombo()
: CDataMiningView
- x_UpdateTotalRange()
: CSeq_loc
- x_UpdateTypeHash()
: CFeatTableDS
- x_UpdateUI()
: CObjectListWidgetSel, CDiagConsolePanel
- x_UpdateViewPanel()
: COpenViewDlg
- x_UpdateViewType()
: CTextPanel
- x_UpdateVisRangeLayout()
: CViewGraphic
- x_UpdateWidget()
: CDataMiningPanel
- x_UpdateWidgetAndTool()
: CDataMiningPanel
- x_UpdateWiggleSet()
: CWiggleReader
- x_UpdateWindowsMenu()
: CWindowManager
- x_UpdateWindowsTree()
: CAppExplorerService
- x_UpdateWithoutStudies()
: CSnpTableData
- x_UpdateWithStudies()
: CSnpTableData
- x_UpdateWorkspaceFolder()
: CAppExplorerService
- x_UpdateWorkspaceFolder_Folders()
: CAppExplorerService
- x_UpdateWorkspaceFolder_Projects()
: CAppExplorerService
- x_UpdateWorkspaceTree()
: CAppExplorerService
- x_Upper()
: CSeqDBIsam
- x_UseOID()
: CSeqDBDemo_ChunkIteration
- x_UserFieldToColor()
: CSGConfigUtils
- x_UserUnlockTSE()
: CTSE_ScopeInfo_Base
- x_UsingAutoSort()
: CAlnMultiModel
- x_UTF8ToString()
: CWString
- x_Valid()
: CSeqdesc_CI
- x_Validate()
: CPsiBlastImpl, CStaticArraySearchBase< KeyValueGetter, KeyCompare >, CwxChooseSeqDlg, CStringUTF8
- x_ValidateAbuttingRNA()
: CValidError_bioseq
- x_ValidateAbuttingUTR()
: CValidError_bioseq
- x_ValidateAlignPercentIdentity()
: CValidError_align
- x_ValidateBarcode()
: CValidError_bioseq
- x_ValidateCall()
: CWorkspaceConstPrx, CProjectConstPrx
- x_ValidateCdregionCodebreak()
: CValidError_feat
- x_ValidateCDSmRNAmatch()
: CValidError_bioseq
- x_ValidateChunkBounds()
: CSplitQueryTestFixture
- x_ValidateCodeBreakNotOnCodon()
: CValidError_feat
- x_ValidateCompletness()
: CValidError_bioseq
- x_ValidateContextOffsetsPerChunkAssignment()
: CSplitQueryTestFixture
- x_ValidateDendiag()
: CValidError_align
- x_ValidateDenseg()
: CValidError_align
- x_ValidateDim()
: CValidError_align
- x_ValidateFastaLike()
: CValidError_align
- x_ValidateFile()
: CAgpValidateApplication
- x_ValidateFilteringAlgorithm()
: CMaskingFmtSpecHelper
- x_ValidateFlags()
: CAlignRangeCollection< TAlnRange >
- x_ValidateIndex()
: ILocalQueryData
- x_ValidateInput()
: CGenBankLoadOptionPanel, CNetBLASTLoadOptionPanel, CSaveDlg
- x_ValidateLocalQueryData()
: CSplitQueryTestFixture
- x_ValidateLock()
: CNCBlobLockHolder
- x_ValidateLocusTagGeneralMatch()
: CValidError_bioseq
- x_ValidateMoleculeType()
: CBlastInputReader
- x_ValidateMultiplePubs()
: CValidError_bioseq
- x_ValidateOptions()
: CBLASTToolManagerBase, CBLASTSeqToolManager, CBLASTSearchToolManager
- x_ValidatePackage()
: CPkgManager
- x_ValidatePacked()
: CValidError_align
- x_ValidatePages()
: CValidError_imp
- x_ValidateParams()
: CSequenceSearchJob, COrfSearchJob, CFeatureSearchJob, CEntrezSearchJob, CCpgSearchJob, CComponentSearchJob, CCreateNeedlemanWunschToolManager, CAutodefToolManager, CWindowMaskerTool, CCleanupTool, CTreeBuilderTool, CSplignTool, CNetBLAST_DMSearchJob, CMergeAlignmentsToolManager, CGroupAlignmentsToolManager, CFindOverlapTool, CCreateGeneModelToolManager, CCleanupAlignmentsToolManager, CBLASTToolManagerBase, CFeatureSearchJob, CSearchJobBase, CAlgoToolManagerBase
- x_ValidatePssmVsGi129295()
: CPsiBl2SeqTestFixture
- x_ValidatePssmVsGi40456275()
: CPsiBl2SeqTestFixture
- x_ValidatePssmVsGi7450545()
: CPsiBl2SeqTestFixture
- x_ValidatePubFeatures()
: CValidError_bioseq
- x_ValidateQueries()
: CMultiAligner
- x_ValidateQueriesPerChunkAssignment()
: CSplitQueryTestFixture
- x_ValidateQueryContextsPerChunkAssignment()
: CSplitQueryTestFixture
- x_ValidateQueryInfoForChunk()
: CSplitQueryTestFixture
- x_ValidateQueryInMsa()
: CPsiBlastInputClustalW
- x_ValidateQuerySeqLocsPerChunk()
: CSplitQueryTestFixture
- x_ValidateSegmentGap()
: CValidError_align
- x_ValidateSeqFeatLoc()
: CValidError_feat
- x_ValidateSeqId()
: CValidError_align
- x_ValidateSeqLength()
: CValidError_align
- x_ValidateSourceFeatures()
: CValidError_bioseq
- x_ValidateState()
: CwxTreeCtrlEx
- x_ValidateStd()
: CValidError_align
- x_ValidateStrand()
: CValidError_align
- x_ValidateTitle()
: CValidError_bioseq
- x_ValidateUserHits()
: CMultiAligner
- x_ValidateUsingFiles()
: CAgpValidateApplication
- x_ValidDesc()
: CSeqdesc_CI
- x_ValidNeighboursOnFirstDim()
: CMergedPairwiseAln
- x_ValidNeighboursOnSecondDim()
: CMergedPairwiseAln
- x_Value()
: ASNParser, DTDParser
- x_Verify()
: oligofar::CScoring, CMemoryFile, CMemoryFileSegment
- x_Verify_AssignType()
: CVariant
- x_VerifyFaultObj()
: CSoapMessage
- x_VerifyFrame()
: CBlastQueryFilteredFrames
- x_VerifyFrameEnded()
: CDebugDumpContext
- x_VerifyFrameStarted()
: CDebugDumpContext
- x_VerifyProgressNotNull()
: CAppJobDispatcher
- x_VerifySettings()
: CSeqGraphicConfig
- x_ViewsUpdateItemRange()
: CSelListModelImpl< Item >
- x_ViewsUpdateItems()
: CSelListModelImpl< Item >
- x_Visible_AddChildToContainer()
: CDockContainer
- x_Visible_RemoveNode()
: CDockContainer
- x_Visible_ReplaceChildWithContainer()
: CDockContainer
- x_Visible_ReplaceContainerWithChild()
: CDockContainer
- x_Visible_V()
: CSeqGlyph
- x_WaitForBlobLock()
: CNCMessageHandler
- x_WaitForDBLoadJob()
: CNetBLASTUIDataSource
- x_WaitForPoolStop()
: CThreadPool_ServiceThread
- x_WaitForPredicate()
: CThreadPool_Impl, CBlockingQueue< TRequest >
- x_Warn()
: CGFFReader, CGff3Reader
- x_WGSComment()
: CFlatGatherer
- x_WindowAvgScores()
: CScoringJob
- x_WorkOnThread()
: CSchedulerEngine
- x_World2Local()
: CSeqGlyph
- x_WrapAlignmentInSeqAnnot()
: CBlastFormat
- x_WrapDescription()
: CSaveDlg
- x_WrapOutputLine()
: CAlignFormatUtil
- x_Write()
: CSeq_annot_SNP_Info_Reader, CBDB_File, SDiagMessage
- x_WriteArchive()
: CTar
- x_WriteBlobData()
: CNCMessageHandler
- x_WriteCacheFile()
: CMRUCache
- x_WriteClassNamespace()
: CObjectOStreamXml
- x_WriteCloseTag()
: CXmlTagWriter, CTextTagWriter, ITagWriter
- x_WriteEntryInfo()
: CTar
- x_WriteErrorToMonitor()
: CNetScheduleHandler
- x_WriteExtraGis()
: CSeqAlignFilter
- x_WriteFile()
: CProjectFileWriter
- x_WriteFileHeader()
: CGBSeqFormatter
- x_WriteGBSeq()
: CGBSeqFormatter
- x_WriteGtf()
: CProjectFileWriter
- x_WriteHeader()
: CWriteDB_IsamIndex
- x_WriteIndent()
: CXmlTagWriter
- x_WriteIndexFile()
: CElementaryMatching
- x_WriteIntFixed()
: CBlastDbBlob
- x_WriteIntFixed_LE()
: CBlastDbBlob
- x_WriteObject()
: CProjectFileWriter
- x_WriteOctetString()
: CXmlValueItem
- x_WriteOverflow()
: CBDB_CacheIWriter
- x_WritePacket()
: CTransmissionWriter
- x_WriteRaw()
: CBlastDbBlob
- x_WriteSeqIds()
: CFastaOstream
- x_WriteSeqTitle()
: CFastaOstream
- x_WriteSequence()
: CFastaOstream
- x_WriteStream()
: CXmlTagWriter, CTextTagWriter, ITagWriter
- x_WriteString()
: CObjectOStreamJson, CBlastDbBlob, CXmlValueItem
- x_WriteTag()
: CXmlTagWriter, CTextTagWriter, ITagWriter
- x_WriteText()
: CXmlTagWriter, CTextTagWriter, ITagWriter
- x_WriteToStream()
: CStringOrBlobStorageWriter
- x_WriteVarInt()
: CBlastDbBlob
- x_XrefInGeneXref()
: CFlatXrefQVal
- x_Zoom()
: CGl3dWindow, CSplineWindow, CGl3dWindow
- x_ZoomAll()
: CGlWidgetBase
- x_ZoomIn()
: CPhyloTreeWidget, CGlWidgetBase
- x_ZoomOut()
: CPhyloTreeWidget, CGlWidgetBase
- x_ZoomToHits()
: CHitMatrixWidget
- x_ZoomToRange()
: CAlnMultiWidget
- xCancel()
: CODBC_SendDataCmd
- xCheck4MoreResults()
: CODBC_RPCCmd, CODBC_LangCmd
- xCMSPeak()
: CMSPeak
- xfer_init
: DB_BCPINFO, _cs_blkdesc
- xflags
: gz_header_s
- xGetBlobOStream()
: CResultSet
- xGetData()
: CODBC_RowResult
- xLangCmd()
: CODBC_Connection, CTL_Connection
- xmlattr_
: xml::impl::ait_impl
- xmlchar_helper()
: xml::impl::xmlchar_helper
- XMLDataGenerator()
: CMsvcTools
- XmlEncode()
: NStr
- XmlMemberSeparator()
: CChoiceDataType, CDataContainerType, CDataMemberContainerType
- xmlnode_
: xml::impl::node_impl, xml::attributes::pimpl, xml::impl::ait_impl
- XmlTagName()
: CDataType
- Xor()
: mu::ParserInt
- xorig
: BitmapCharRec
- xpath_expression()
: xml::xpath_expression
- xpos
: GlZoomSpec::PixelDim
- xratio
: GlZoomSpec
- xRepulsion
: CPhyloForce::calc_two_forces
- XSDEntityLexer()
: XSDEntityLexer
- XSDLexer()
: XSDLexer
- XSDParser()
: XSDParser
- xsgetn()
: CCompressionStreambuf, CIndentingStreambuf, CPushback_Streambuf, CConn_Streambuf, CRWStreambuf
- xslt::stylesheet
: xml::document
- xslt_result_
: xml::impl::doc_impl
- xSpring
: CPhyloForce::calc_two_forces
- xsputn()
: CCompressionStreambuf, CPushback_Streambuf, CConn_Streambuf, CRWStreambuf
- xsum
: LinkHSPStruct, BlastHSPLink
- xWrite()
: CMSPeak
- xx_unused_CCoreException()
: CCoreException
- xx_unused_CDB_ClientEx()
: CDB_ClientEx
- xx_unused_CDB_DeadlockEx()
: CDB_DeadlockEx
- xx_unused_CDB_DSEx()
: CDB_DSEx
- xx_unused_CDB_MultiEx()
: CDB_MultiEx
- xx_unused_CDB_RPCEx()
: CDB_RPCEx
- xx_unused_CDB_SQLEx()
: CDB_SQLEx
- xx_unused_CDB_TimeoutEx()
: CDB_TimeoutEx
- xx_unused_CDB_TruncateEx()
: CDB_TruncateEx
- XY()
: IPhyGraphicsNode
Generated on Wed Dec 9 07:48:56 2009 for NCBI C++ ToolKit by
1.4.6
Modified on Wed Dec 09 08:18:44 2009 by modify_doxy.py rev. 173732