Here is a list of all class members with links to the classes they belong to:

- s -

• s : tag_HtmlEntities, pythonpp::CSequnceProxy< T >, pythonpp::CDictProxy< T >, SNCBIFullScoreMatrix, tds_socket, names_blob_prefix_t
• s0 : nwaln_mrnaguide, _Seg_Gsm
• s1 : nwaln_mrnaguide
• s_altCount : oligofar::CNcbi8naBase
• s_BinarySearch() : CSeqDBGiMask
• s_BlastInterrupt() : CBLASTSeqToolJob
• s_BlastInterruptCallback() : CSplignJob
• s_char2event : CTrBase
• s_CleanupThreadsTls : CThread
• s_CompareCRefs() : SGlyphBySeqSize, SGlyphBySeqPos, CTrackProxy::STPSorterByID
• s_complement : oligofar::CNcbi8naBase, oligofar::CIupacnaBase
• s_ComputeStats() : CSplign
• s_ContainsType() : SIteratorFunctions
• s_convert2ag : oligofar::CQueryHash
• s_convert2eq : oligofar::CQueryHash
• s_convert2tc : oligofar::CQueryHash
• s_count : oligofar::CMappedAlignment, oligofar::CContig, oligofar::CSRead, oligofar::CQuery, oligofar::CHit
• s_CountNumberUniqueGIs() : CPsiBlastTestFixture
• s_CreateBlastArgDescriptions() : CBlastArgs
• s_CreateBlastOptions() : CBlastArgs
• s_CreateDefaultAligner() : CSplign
• s_CreateThread() : CThreadPool_ThreadImpl
• s_defaultScoreTbl : oligofar::CAlignerBase
• s_dibase2code : oligofar::CColorTwoBase
• s_DisabledPackages : CMsvcPrjProjectContext
• s_EnabledPackages : CMsvcPrjProjectContext
• s_Encode() : CAscii85
• s_end : BlastOffsetPair
• s_end_trim : LinkHSPStruct
• s_ExtractBlastArgs() : CBlastArgs
• s_fromIupacna : oligofar::CNcbi8naBase
• s_GenbankMol : CFlatItemFormatter
• s_GetCoverage() : CHitFilter< THit >
• s_GetDefaultCompartmentPenalty() : CSplign
• s_GetDefaultDropOff() : CElementaryMatching
• s_GetDefaultMaxGenomicExtent() : CSplign
• s_GetDefaultMaxIntron() : CCompartmentFinder< THit >
• s_GetDefaultMinCompartmentIdty() : CSplign
• s_GetDefaultMinCoverage() : CCompartmentFinder< THit >
• s_GetDefaultMinExonIdty() : CSplign
• s_GetDefaultPenalty() : CCompartmentFinder< THit >
• s_GetEffLenOpts() : CBlastSetupTestFixture
• s_GetEnvFlag() : CPackString
• s_GetFeatLabel() : CCompareFeats
• s_GetFileRange() : CSeqDBGiMask
• s_GetGeneId() : CCompareSeqRegions
• s_GetImplPointer() : CThreadPool_ThreadImpl, CThreadPool_Impl
• s_GetLock() : CParamBase
• s_GetLocLabel() : CCompareFeats
• s_GetOverlap() : CHitFilter< THit >
• s_GetScoringOpts() : CBlastSetupTestFixture
• s_GetShift() : CGlPane
• s_GetSpan() : CHitFilter< THit >
• s_id : distanceReportStr
• s_InitLegalQuals() : CSeqFeatData
• s_InitMandatoryQuals() : CSeqFeatData
• s_InitSubtypesTable() : CSeqFeatData
• s_IsConsensusSplice() : CNWFormatter::SSegment
• s_IsLowComplexity() : CElementaryMatching
• s_IsRasterFormat() : CPrintOptions
• s_IsVectorFormat() : CPrintOptions
• s_iTestBufferSize : CFormatGuess
• s_iupacnaTable : oligofar::CNcbi2naBase
• s_Key() : SAccGuide
• s_kingdom : SSeqDBTaxInfo
• s_left_left : distanceReportStr
• s_left_middle : distanceReportStr
• s_left_right : distanceReportStr
• s_LightIndex : CGlLight
• s_Lights : CGlLight
• s_locale : mu::Parser
• s_longestQueue : oligofar::CFilter
• s_max : BlastIntervalTree
• s_MergeAbutting() : CHitFilter< THit >
• s_min : BlastIntervalTree
• s_ModuleFileSuffix : CDataTypeModule
• s_msg : CAgpErr
• s_name : perfectHitStr, distanceReportStr
• s_ncbi2na_ncbi4na_2bases : oligofar::CPermutator8b
• s_ncbi2na_ncbi4na_4bases : oligofar::CPermutator8b
• s_ncbi8naTable : oligofar::CNcbi2naBase
• s_ObjMgr_QueryFactory_LocalDataFromBlastQueryVector() : CQueryDataTestFixture
• s_ObjMgr_QueryFactory_LocalDataFromTSeqLocVector() : CQueryDataTestFixture
• s_ObjMgrFree_QueryFactory_LocalDataFromBioseq() : CQueryDataTestFixture
• s_ObjMgrFree_QueryFactory_LocalDataFromBioseq_set() : CQueryDataTestFixture
• s_off : BlastOffsetPair
• s_off_trim : LinkHelpStruct
• s_offset : tracker::result
• s_offset_trim : LinkHSPStruct
• s_phrapProbTbl : oligofar::CScoreTbl
• s_PLowerSubj() : CCompartmentFinder< THit >::CCompartment
• s_PNullRef() : CHitFilter< THit >, CCompartmentFinder< THit >
• s_probtbl : oligofar::CScoreTbl
• s_ReadBlastHit() : CSplignApp
• s_right_left : distanceReportStr
• s_right_middle : distanceReportStr
• s_right_right : distanceReportStr
• s_RunGreedy() : CHitFilter< THit >
• s_RunLengthDecode() : CAlignShadow
• s_RunLengthEncode() : CAlignShadow
• s_smallestNcbi2na : oligofar::CNcbi8naBase
• s_SNP_Type_Label : SSNP_Info
• s_SpecialName : DTDParser
• s_SplignInterruptCallback() : CSplignJob
• s_start : BlastUngappedData, BlastOffsetPair
• s_static_tables_inited : oligofar::CPermutator8b
• s_TestPolyA() : CSplign
• s_TestSingleSubjectNuclMask() : CBlastSetupTestFixture
• s_TrackHit() : CHitFilter< THit >
• s_TypeStrToValue() : CHistConfParams
• s_TypeValueToStr() : CHistConfParams
• s_validate_consistency : oligofar::CMappedAlignment
• s_ValidateProtein130912() : CBlastSetupTestFixture
• sac : _Qry_Seq
• SAccGuide() : SAccGuide
• SafeCast() : CTypeConverter< T >
• SafeCast2() : CTypeConverter< T >
• SafeTruncate() : CBDB_RawFile
• safety_ : xml::ns
• SAffinityDictDB() : SAffinityDictDB
• SAffinityDictTokenIdx() : SAffinityDictTokenIdx
• SAffinityIdx() : SAffinityIdx
• SAffinityInfo() : SAffinityInfo
• SAlignedCompartment() : CSplign::SAlignedCompartment
• SAlignedSeq() : SAlignedSeq
• SAlignInfo() : CPhrap_Contig::SAlignInfo
• SAlignInOut() : CNWAligner::SAlignInOut
• SAlignment() : CAlnTableDS::SAlignment
• SAlignment_Row() : SAlignment_Segment::SAlignment_Row
• SAlignment_Segment() : SAlignment_Segment
• SAlignSmearSort() : SAlignSmearSort
• SAlignStats() : CContigAssembly::SAlignStats
• SAllocator() : CSplicedAligner::SAllocator< T >
• SAlternate() : IDictionary::SAlternate
• Same() : oligofar::CHashPopulator
• SameCacheParams() : ICache, CSQLITE3_Cache, CDBAPI_Cache, CBDB_Cache, CNetICacheClient
• SameHash() : CSeq_id_Textseq_Info::TKey
• SameHashNoVer() : CSeq_id_Textseq_Info::TKey
• sameScoreThreshold : LeaveOneOutParams
• SameSeq() : CSeqref
• SameStrand() : CAutoDefFeatureClause_Base, CAutoDefFeatureClause, SAlignment_Segment::SAlignment_Row
• SameTSE() : CSeqref
• sample_loc : dup_lookup_table::sample_loc, tracker
• sample_set : dup_lookup_table
• sample_set_type : dup_lookup_table
• SAnnotCompareFilter() : SAnnotCompareFilter
• SAnnotObject_Index() : SAnnotObject_Index
• SAnnotObjectsIndex() : SAnnotObjectsIndex
• SAnnotPiece() : SAnnotPiece
• SAnnotSelector() : SAnnotSelector
• SAnnotTypeSelector() : SAnnotTypeSelector
• SArgDependency() : CArgDescriptions::SArgDependency
• SAttributeValue() : CNCBINode::SAttributeValue
• SAutodefParams() : SAutodefParams
• Save() : CTestConfigMediator, CSimpleMakeFileContents, ViewerBase, COffsetData_Factory, COffsetList, CSubjectMap_Factory, CSubjectMap_Factory_TBase, CPhyloTreeDataSource, CColorTableMethod, CTemplateScoringMethod, CThemePreviewMediator, CThemeMediator, IConfigMediator, ITemplateUITool, CBookmark, CPluginBase, CGBProjectHandle, CProjectPrx, CBDB_BlobSplitStore< TBV, TObjDeMux, TL >, CBDB_BlobDeMuxPersistent, CBDB_RangeMap< TBV >, CBDB_ExtBlobStore< TBV >
• save_alphaSize : DState
• save_comments() : pcrecpp::Scanner
• save_comments_ : pcrecpp::Scanner
• save_curr : DState
• save_EOB : DState
• save_es : DState
• save_gBase : DState
• save_gLimit : DState
• save_gMinlen : DState
• save_gPerm : DState
• save_groupNo : DState
• save_groupPos : DState
• save_gSel : DState
• save_i : DState
• save_j : DState
• save_masked_regions() : CSymDustMasker
• save_N : DState
• save_nblock : DState
• save_nblockMAX : DState
• save_nextSym : DState
• save_nGroups : DState
• save_nSelectors : DState
• save_query_timeout : tds_socket
• save_start : recursion_info
• save_t : DState
• save_to_file() : xslt::impl::result, xml::document
• save_to_string() : xslt::impl::result, xml::document
• save_zj : DState
• save_zn : DState
• save_zt : DState
• save_zvec : DState
• SaveAlignment() : SequenceViewer
• SaveAlignments() : UpdateViewer
• SaveAnyFile() : CSearchHelper
• SaveAsciiPssm() : CPsiBlastAppArgs
• SaveASNData() : StructureSet
• SaveBeforeReturn() : mu::ParserTokenReader
• SaveBlob() : CProcessor_St_SE, CProcessor_ID1
• SaveBlobVersion() : CWriter, CCacheWriter
• SaveCheckpoint() : CPsiBlastAppArgs
• SaveCommand() : CFileDBEngine, IEditsDBEngine
• SaveConfig() : CAnnotWriteConfig
• SaveCurrentRange() : CSeqGraphicPane
• SaveCurrentSettings() : CTestSettings, CLayoutConfig, CFontConfig, CPhyloTreeScheme
• saved_max : recursion_info
• SaveData() : CProcessor_ID2
• SaveDataAndSkel() : CProcessor_ID2AndSkel
• SaveDialog() : ViewerWindowBase, ViewerBase, UpdateViewerWindow, UpdateViewer, StructureWindow, SequenceViewerWindow, SequenceViewer
• SavedIntermediateAlignments() : CBMARefinerTrial
• SaveFile() : CNcbiResourceInfoFile
• SaveHeader() : CDbIndex_Factory
• SaveIdDeMux() : CBDB_BlobSplitStore< TBV, TObjDeMux, TL >
• SaveInfo() : CTemplateScoringMethod, ITemplateUITool
• SaveIntermediateAlignments() : CBMARefinerTrial
• SaveLayout() : CWindowManager, CDockManager, CDockContainer, CWindowManagerService, IWindowManagerService
• SaveLocksTo() : CReaderRequestResult
• SaveMask() : CFastaReader
• SaveMasks() : CFastaReader
• SaveNoBlob() : CProcessor_St_SE
• SaveObject() : CLDS_Object
• SaveObjects() : CLDS_Object
• SaveOneFile() : CSearchHelper
• SavePairwiseFromMultiple() : AlignmentManager
• SavePendingStructures() : UpdateViewer
• SaveProfile() : CLayoutTrack
• SaveProject() : CPluginBase
• SavePssmToFile() : CPsiBlastApp
• SaveRequest() : CCgiApplication
• SaveResultToCache() : CCgiApplication
• SaveSeed() : CTrackedSeeds_Base< NHITS >
• SaveSeq_idAccVer() : CWriter, CCacheWriter
• SaveSeq_idBlob_ids() : CWriter, CCacheWriter
• SaveSeq_idGi() : CWriter, CCacheWriter
• SaveSeq_idLabel() : CWriter, CCacheWriter
• SaveSeq_idSeq_ids() : CWriter, CCacheWriter
• SaveSeqData() : CFastaReader
• SaveSettings() : CAnnotCompareFilterDlg, CGwasTrackLoadManager, CWigLoadManager, CGffLoadManager, CGffExporter, CGffExportPage, CFlatFileExporter, CFlatFileExportPage, CFASTAFormatLoadManager, CFastaExporter, CFastaExportPage, CBedLoadManager, CAgpLoader, CAgpExporter, CAgpExportPage, CPhyLoader, CPhyExporter, CPhyExportPage, CDotMatrixPanel, CAlignNeedlemanWunschPanel, SCreateNeedlemanWunschParams, CAsnExporter, CAsnExportPage, CMainFrame, CDialog, CSeqGraphicConfig, CHistParamsManager, CGeneModelConfig, CObjectListWidgetSel, CObjectListWidget, CGlWidgetBase, CWidgetDisplayStyle, CAlnMultiWidget, CSnpTableView, CGwasLoadParams, CAutodefParamsPanel, SAutodefParams, CWindowMaskerParams, CWindowMaskerPanel, CWigLoadParams, CFeatTableView, CGffLoadParams, CGffExportParams, CGenBankUILoadManager, CFlatFileExportParams, CFastaLoadParams, CFastaExportParams, CCleanupParams, CCleanupPanel, CBedLoadParams, CAgpLoadParams, CAgpExportParams, CTreeBuilderParams, CTreeBuilderPanel, CSplignParams, CSplignPanel, CPhyLoadParams, CNetBLASTUILoadManager, CMultiAlignView, CMergeAlignmentsParamsPanel, SMergeAlignmentsParams, CGroupAlignmentsParamsPanel, SGroupAlignmentsParams, CFindOverlapParams, CFindOverlapPanel, CCreateGeneModelParamsPanel, SCreateGeneModelParams, CCleanupAlignmentsParamsPanel, SCleanupAlignmentsParams, CBLASTToolManagerBase, CBLASTSearchOptionsPanel, CAlignSpanView, CUIToolRegistry, IRegSettings, CBookmarkManager, CWorkbench, CWindowManagerService, CViewManagerService, CTaskView, CTaskTablePanel, CItemSelectionPanel, CEventView, CEventTablePanel, CDiagConsoleView, CDiagConsolePanel, CDiagConsoleList, CVisibleRangeService, CFileLoadManager, CUIDataSourceService, CSeqLocFormBase, CSelectionView, CSelectionPanel, CSelectionService, CSearchFormBase, CProjectTreeView, CProjectService, SProjectSelectorParams, COpenViewManager, CConversionResultPanel, CParamsPanel, COpenDlg, IDMSearchForm, CDataMiningView, CDataMiningService, CDataMiningPanel, CAsnExportParams, CAppExplorerService, CAlgoToolManagerParamsPanel, CAlgoToolManagerBase
• SaveSettingsAsString() : CGeneModelConfig
• SaveSettingsToASN() : StyleSettings
• SaveSNPBlob() : CProcessor_St_SE_SNPT
• SaveStringGi() : CWriter, CCacheWriter
• SaveStringSeq_ids() : CWriter, CCacheWriter
• SaveToASNUserAnnotations() : StyleManager
• SaveToASNViewSettings() : OpenGLRenderer
• SaveTreeAs() : CGuideTree
• SaveWorkspace() : CProjectService
• sax_ : xml::impl::tree_impl
• sax_handler_ : xml::impl::epimpl
• SBaseTSE() : CTSE_Info::SBaseTSE
• SBDB_BvStore_Id() : SBDB_BvStore_Id< TBV >
• SBDB_CacheStatistics() : SBDB_CacheStatistics
• SBDB_CacheUnitStatistics() : SBDB_CacheUnitStatistics
• SBDB_TimeAccessStatistics() : SBDB_TimeAccessStatistics
• SBinMapped() : CBinsGlyph::SBinMapped
• sbjend : hitStr
• sbjGIs : hitStr
• sbjLen : hitStr
• sbjName : hitStr
• sbjstart : hitStr
• SBlastDbMaskData() : SBlastDbMaskData
• SBlastDbParam() : CBlastDbDataLoader::SBlastDbParam
• SBlastSequence() : SBlastSequence
• SBlastSetupData() : SBlastSetupData
• SBlobAccessDescr() : ICache::SBlobAccessDescr
• SBlobChunkLoc() : CBDB_ExtBlobMap::SBlobChunkLoc
• SBlobLoc() : CBDB_ExtBlobMap::SBlobLoc
• sbp : TestFixture, AascanTestFixture, AalookupTestFixture, BlastKappa_GappingParamsContext, BlastGapAlignStruct
• SBroadcastDlgParams() : SBroadcastDlgParams
• SBroadcastParams() : SBroadcastParams
• sc : CAnyIntron::CSIntronScore
• scache1 : CSRSearch_Impl< index_t >
• scache2 : CSRSearch_Impl< index_t >
• SCache_AttrDB() : SCache_AttrDB
• SCache_IdIDX() : SCache_IdIDX
• scache_set1 : CSRSearch_Impl< index_t >
• scache_set2 : CSRSearch_Impl< index_t >
• SCacheDescr() : SCacheDescr
• SCacheElement() : SCacheElement< TKey, TSize >
• SCacheKey() : CConvertCache::SCacheKey
• Scale : CImageUtil, CDB_Numeric, DBCOL
• scale : CHapmapJob::SParams, CGapJob::SParams, CBinsJob::SParams, CProSplignScaledScoring, CSnpJob::SParams, CLDBlockDS::SParams, tagSQL_NUMERIC_STRUCT, tdsnumeric, dbtypeinfo, DBNUMERIC, _cs_param, _cs_datafmt, _cs_numeric
• scale_factor : BlastKappa_SavedParameters, BlastScoreBlk, BlastRPSAuxInfo, BlastScoringParameters
• ScaleConst() : CWiggleTrack
• scaled_compress_table : BlastCompressedAaLookupTable
• scaled_pssm : _PSIInternalPssmData
• scaled_subst_matrix : CSubstMatrix
• scaledMatrix : PSSMWrapper
• ScaleLinear() : CWiggleTrack
• ScalePreference() : CDBUDRandomMapper
• SCALING_FACTOR : Threader
• scalingFactor : PSSMWrapper, PssmMakerOptions
• scan : CPkl2hdf5Application::pklSpectrum, CMsHdf5::MSMapEntry
• Scan() : CBDB_FileScanner, CExprParser
• scan_range : BlastInitialWordOptions
• scan_step : BlastMBLookupTable, BlastNaLookupTable, BlastSmallNaLookupTable
• ScanCheckHitsCore() : TestFixture
• SCandidateInfo() : CObjectsSniffer::SCandidateInfo
• ScanEndOfId() : CObjectIStreamAsn
• ScanMaxHitsTestCore() : TestFixture
• Scanner() : pcrecpp::Scanner
• ScanOffsetTestCore() : TestFixture
• ScanPackages() : CPkgManager
• ScanSequenceBuffer() : oligofar::CSeqScanner
• scansub_callback : BlastMBLookupTable, BlastNaLookupTable, BlastSmallNaLookupTable, BlastCompressedAaLookupTable, BlastAaLookupTable
• SCaseInsensitiveStrComp() : SCaseInsensitiveStrComp
• SCgiArg() : CCgiArgs::SCgiArg
• SCgiStatus() : SCgiStatus
• SChainMember() : SChainMember
• Schedule() : CWorkerNodeIdleThread
• scheme : SConnNetInfo
• SChunkTranslator() : SChunkTranslator
• scientific_name : SSeqDBTaxInfo
• SCigarAlignment() : SCigarAlignment
• SClassInfo() : CFileCode::SClassInfo
• SCleanupAlignmentsParams() : SCleanupAlignmentsParams
• SCluster() : CAlignedFeatureGraph::SCluster
• scm_EmptyList : CSourceItem
• scm_ModeCmd : CSelectionPanel, CDataMiningPanel
• scm_Table : CNcbi8naAmbig, CNcbi4naAmbig, CIupacnaAmbig, C8naCmp, CIupacnaCmp, C4naReverse, CStdaaToEaa, CStdaaToIupacaa, CEaaToStdaa, CEaaToIupacaa, CIupacaaToStdaa, C8naTo2na, C8naToIupacna, C4naTo8na, C4naTo2naExpand, C4naToIupacna, C2naExpandToIupacna, C2naTo8na, C2naTo2naExpand, C2naToIupacna, CIupacnaTo8na, CIupacnaTo4na, CIupacnaTo2naExpand, CIupacnaTo2na, CIupacnaToIupacna
• scm_Table0 : C4naRevCmp, C2naRevCmp, C4naCmp, C2naReverse, C4naTo2na, C2naTo4na
• scm_Table1 : C4naRevCmp, C2naRevCmp, C4naCmp, C2naCmp, C2naReverse, C4naTo2na, C2naTo4na
• scm_Table2 : C2naRevCmp, C2naCmp, C2naReverse
• scm_Table3 : C2naRevCmp, C2naCmp, C2naReverse
• scm_Tables : C4naRevCmp, C2naRevCmp, C2naCmp, C2naReverse
• scm_Unclassified : CSourceItem
• scm_Unknown : CSourceItem
• SCmdLineArgListImpl() : SCmdLineArgListImpl
• SColMetaData() : CResultSetMetaData::SColMetaData
• SColumn : IAlnMultiHeaderContext::SColumn, CMultiAligner::SColumn, CMultiAligner
• SCommandDef : CNCMessageHandler
• SCommandMap : CNetScheduleHandler
• SCompartment() : SCompartment
• SConfigInfo() : SConfigInfo
• SConnInfo() : CReaderServiceConnector::SConnInfo
• SConstraint : CMultiAlignerOptions::SConstraint, CMultiAlignerOptions
• SConstScopedObject() : SConstScopedObject
• SCoordRect() : SCoordRect
• scope : CAnnotCompareDS::SRow, CAlnTableDS::SAlignment, SConstScopedObject, SScopedObject, _cs_objname, TreeOptions, CBlastSearchQuery, SSeqLoc
• Scope : CProjectFileWriter
• scopelen : _cs_objname
• score : PssmScorer, Cell, SGFFrec, SeqAlign, IDictionary::SAlternate, CGFFReader::SRecord, CDisplaySeqalign::SAlnInfo, CSGFeatureJob::SLandmarkFeat, CLDBlockGlyph::SValue, CSeqMasker, DP_AlignmentResult, BlastHSP, BlastGapAlignStruct, BlastUngappedData, BlastCompo_Alignment, SCompartment
• Score() : oligofar::TAlignerBase< CQuery, CSubject >, oligofar::IScore, oligofar::CDibaseScore< TCvtQry, TCvtSubj >, oligofar::CNcbipnaScore< TCvtQry, TCvtSubj >, oligofar::CNcbiqnaScore< TCvtQry, TCvtSubj >, oligofar::CNcbi8naScore< TCvtQry, TCvtSubj >, oligofar::CAligner, CHMM_State, CLorentz, CNullRegion, CMC_NonCodingRegion< order >, CNonCodingRegion, CMC3_CodingRegion< order >, CCodingRegion, CWAM_Stop, CWMM_Start, CWAM_Acceptor< order >, CWAM_Donor< order >, CTerminal, CMarkovChainArray< order >, CMarkovChain< 0 >, CMarkovChain< order >, CDictionaryUtil, CSeq_id, CGeneModel, CCDSInfo
• score_ : CSymDustMasker::perfect
• score_avg : Blast_ScoreFreq
• score_counts : CWinMaskCountsGenerator
• SCORE_DEV_THRESH_DEFAULT : CBMARefinerEngine
• score_edge : BlastHSPBestHitParams, BlastHSPBestHitOptions
• SCORE_FUNC : CBlastTabular
• SCORE_INVALID_OR_NOT_COMPUTED : ColumnScorer, RowScorer
• score_matrix_name : CProSplignOptions_Base
• score_max : Blast_ScoreFreq
• score_min : Blast_ScoreFreq
• SCORE_ON_BLAST_FAILURE : DM_BlastScore
• score_options : AascanTestFixture
• score_p3 : CSeqMasker
• score_type : CAlignmentSmear, CScoreVector< Key, Score >, CRawScoreVector< Key, Score >
• score_url : CShowBlastDefline::SDeflineInfo
• SCORE_WHEN_NO_SEQ_ALIGN : CSimpleB2SWrapper, CdBlaster
• ScoreAlignment() : oligofar::CMappedAlignment
• ScoreAlignments() : IAlignmentScorer, CCommonComponentScorer, CPctCoverageScorer, CPctIdentScorer, CBlastScorer
• scoreBlockPair() : BlockExtender
• ScoreCdnas() : CChainer::CChainerImpl, CChainer
• ScoreCDSes_FilterOutPoorAlignments() : CChainer::CChainerImpl, CChainer
• ScoreFromTranscript() : CSplicedAligner32, CSplicedAligner16, CPSSMAligner, CNWAligner
• ScoreMap : CAlignmentBasedRowSelector
• ScoreMapIt : CAlignmentBasedRowSelector
• ScoreMapRit : CAlignmentBasedRowSelector
• ScoreMapVT : CAlignmentBasedRowSelector
• ScoreMatrix() : ScoreMatrix
• scoreOneColumn() : PssmScorer
• ScoreRef() : oligofar::CScoreTbl
• ScoreRowByPSSM() : AlignmentUtility
• scores : SNCBIPackedScoreMatrix, CAlnTableDS::SAlignment, CSeqMaskerScoreMean
• scores_start : CSeqMaskerScoreMean
• ScoreToProb() : CCoiledCoil
• SCORING_MATRIX_DEFAULT : CSimpleB2SWrapper, CdBlaster
• scoringParams : BlastKappa_GappingParamsContext
• ScoringTerm : BlockExtender
• SCreateGeneModelParams() : SCreateGeneModelParams
• SCreateNeedlemanWunschParams() : SCreateNeedlemanWunschParams
• Screen() : CLDS_Query::CSequenceFinder
• Screen2Seq() : CSeqGraphicRenderer
• Screen2SeqWidth() : CSeqGraphicRenderer
• ScreenSequence() : CLDS_Query
• ScreenToSeq() : CRenderingContext
• script : ucd_record
• Scroll() : CCrossAlnRenderer, CCrossAlnPane, CGlWidgetBase, CAlnMultiWidget, IAlnMultiPaneParent, CGlPane
• ScrollTo() : SequenceViewerWidget
• ScrollToBottom() : CTextItemPanel
• ScrollToColumn() : ViewerWindowBase
• ScrollToPosition() : CSeqTextWidget, CSeqTextPane
• ScrollToRow() : ViewerWindowBase
• ScrollToSequencePosition() : CSeqTextWidget
• ScrollToSourcePosition() : CSeqTextWidget
• ScrollToText() : CSeqTextWidget
• SCSVExportParams() : SCSVExportParams
• SData() : CCgiEntry::SData
• SDatabaseScanData() : SDatabaseScanData
• SDataLoaderConfig() : SDataLoaderConfig
• SDBAPI_CacheDescr() : SDBAPI_CacheDescr
• SDbInfo() : CAlignFormatUtil::SDbInfo
• SDbSumInfo() : SDbSumInfo
• SDeletedJobsDB() : SDeletedJobsDB
• SDeltaSeqSummary() : SDeltaSeqSummary
• SDemoDB() : SDemoDB
• SDetails() : CHMMParameters::SDetails
• SDiagErrCodeDescription() : SDiagErrCodeDescription
• SDiagMessage() : SDiagMessage
• SDiagMessageData() : SDiagMessageData
• SDriverInfo : CPluginManager< TClass >::SDriverInfo, SDriverInfo, IClassFactory< TClass >
• SDrivers() : C_xDriverMgr::SDrivers
• SDubiousShortSequence() : SDubiousShortSequence
• sdvir : SRombergCbackArgs
• SE : CSRSearch
• sea : CAnyIntron
• Search() : CSearch< LEGACY, NHITS >, CBoyerMooreMatcher, CSeqSearch, CPluginBase, CDbIndex
• search() : CSRSearch_Impl< index_t >, CSRSearch
• search_in_bitblock() : bm::bvector< Alloc, MS >::enumerator
• search_in_gapblock() : bm::bvector< Alloc, MS >::enumerator
• SearchConditions() : CDB_ITDescriptor
• searchExact() : CSRSearch_Impl< index_t >
• SearchInt() : CSearch_Base< LEGACY, NHITS, derived_t >
• searchOneMismatch() : CSRSearch_Impl< index_t >
• searchsp_eff : BlastEffectiveLengthsOptions
• SearchTaxIdByName() : CTaxon1
• searchThreads : COMSSABase
• sec : CAnyIntron, CTime::TData, STimeoutTag
• secNum : ALICORD
• second : pair_base_member< Base, Member >, SStaticPair< FirstType, SecondType >, CSeqDB::TOffsetPair, tagSQL_DAY_SECOND, tagTIMESTAMP_STRUCT, tagTIME_STRUCT, tdsdaterec
• Second() : CTime
• second_hit_ : STrackedSeed< TWO_HIT >
• second_standard_freq : Blast_CompositionWorkspace
• second_template_type : BlastMBLookupTable
• second_type : SStaticPair< FirstType, SecondType >, pair_base_member< Base, Member >
• SecondContains() : CAlignRange< Position >
• secondNode : meSet
• section : SParamEnumDescription< TValue >, SParamDescription< TValue >
• seed : LeaveOneOutParams
• seeds_ : CSearch_Base< LEGACY, NHITS, derived_t >, CTrackedSeeds_Base< NHITS >
• Seek() : CMemStore, C_RA_Storage
• seek() : bm::decoder_base
• Seekg() : CStreamByteSourceReader, CByteSourceReader
• seekoff() : CIndentingStreambuf, CPushback_Streambuf, CConn_Streambuf, CRWStreambuf
• seekpos() : CIndentingStreambuf, CPushback_Streambuf
• SeekRead() : CBlastDbBlob
• SeekWrite() : CBlastDbBlob
• Seg : UnalignedSegReader
• seg : CAnyIntron
• SegMaskerApplication() : SegMaskerApplication
• segments : SCigarAlignment
• Segments() : CAlnMapPrinter
• segOptions : SBlastFilterOptions
• segs_ : CSubjectMap_Factory_TBase::SSeqInfo
• segsToSet() : ResidueProfiles
• Sel() : oligofar::CScoringFactory
• select() : SeqItem
• Select() : CScoringMethodSelector, CAlnScoringMethodSelector, CScoringMethodSelector, CDMToolSelector, CToupper_Base::C_Data, CTolower_Base::C_Data, CSubs_Base::C_E_Subs, CStrip_Base::C_E_Strip, CRule_Base::C_Data, CPad_Base::C_E_Pad, CObjectUrl_Base::C_Data, CObjectUrl_Base::C_Data::C_Rule, CObjectUrl_Base::C_Data::C_BaseData::C_Rule, CObjectList_Base::C_Data, CNormalize_Base::C_Data, CLink_Base::C_Selector, CApad_Base::C_E_Apad, CItem_Base::C_E_Item, CESummaryResult_Base::C_Data, CTranslationStack_Base::C_Data, CESearchResult_Base::C_Data, CLinkSetDb_Base::C_Data, CLinkSet_Base::C_Data, CLinkSet_Base::C_Data::C_Links::C_LL, CIdUrlSet_Base::C_Data, CIdCheckList_Base::C_II::C_E_II, CEInfoResult_Base, CT3StatusFlags_Base::C_Value, CT3Request_Base, CT3Reply_Base, CTaxon1_resp_Base, CTaxon1_req_Base, CSeq_submit_Base::C_Data, CSeqTestResults_Base::C_Source, CSeqTable_sparse_index_Base, CSeqTable_single_data_Base, CSeqTable_multi_data_Base, CID2S_Seq_loc_Base, CID2S_Chunk_Data_Base::C_Id, CID2S_Chunk_Content_Base, CID2S_Bioseq_Ids_Base::C_E, CSeq_entry_Base, CSeq_graph_Base::C_Graph, CSeq_loc_Base, CSeq_id_Base, CTrna_ext_Base::C_Aa, CSeqFeatData_Base, CRsite_ref_Base, CRNA_ref_Base::C_Ext, COrgName_Base::C_Name, CGenetic_code_Base::C_E, CFeat_id_Base, CCode_break_Base::C_Aa, CSeqEdit_Id_Base, CSeqEdit_Cmd_ReplaceAnnot_Base::C_Data, CSeqEdit_Cmd_RemoveAnnot_Base::C_Data, CSeqEdit_Cmd_ChangeSetAttr_Base::C_Data, CSeqEdit_Cmd_ChangeSeqAttr_Base::C_Data, CSeqEdit_Cmd_AddAnnot_Base::C_Data, CSeqEdit_Cmd_AddAnnot_Base::C_Search_param, CSeqEdit_Cmd_AddAnnot_Base::C_Search_param::C_Obj, CSeqEdit_Cmd_Base, CEMBL_dbname_Base, CSpliced_seg_modifier_Base, CSpliced_exon_chunk_Base, CSeq_align_Base::C_Segs, CScore_Base::C_Value, CProduct_pos_Base, CSeqdesc_Base, CSeq_hist_Base::C_Deleted, CSeq_ext_Base, CSeq_data_Base, CSeq_annot_Base::C_Data, CNumbering_Base, CDelta_seq_Base, CAnnotdesc_Base, CAnnot_id_Base, CRMRequest_Base, CRMReply_Base, CPub_set_Base, CPub_Base, CProject_item_Base, CProjdesc_Base, CPC_XRefData_Base, CPC_StereoCenter_Base, CPC_Source_Base, CPC_InfoData_Base::C_Value, CPC_CompoundType_Base::C_Id, CPC_ResultType_Base::C_Constraints, CPC_AssaySubmit_Base::C_Assay, CPC_AssayData_Base::C_Value, CPrintForm_Base, CNcbi_mime_asn1_Base, CEntrez_general_Base::C_Data, CBiostruc_seqs_aligns_cdd_Base::C_Seq_align_data, CResidue_pntrs_Base, CRegion_pntrs_Base::C_Region, CRegion_boundary_Base, CMove_Base, CChem_graph_pntrs_Base, CBiostruc_feature_set_descr_Base, CBiostruc_feature_Base::C_Location, CBiostruc_feature_Base::C_Property, CSurface_coordinates_Base::C_Surface, CModel_descr_Base, CModel_coordinate_set_Base::C_Coordinates, CCoordinates_Base, CAtomic_temperature_factors_Base, CResidue_graph_pntr_Base, CBiostruc_source_Base::C_Version_of_database, CBiostruc_id_Base, CBiostruc_descr_Base, CBiomol_descr_Base, CMla_request_Base, CMla_back_Base, CID2_Seq_id_Base, CID2_Request_Get_Blob_Info_Base::C_Blob_id, CID2_Request_Base::C_Request, CID2_Reply_Base::C_Reply, CID1server_request_Base, CID1server_back_Base, CGC_Replicon_Base::C_Sequence, CGC_GenomicPart_Base, CUser_field_Base::C_Data, CPerson_id_Base, CObject_id_Base, CInt_fuzz_Base, CDate_Base, CMaps_Base::C_Method, CEntrez2_boolean_element_Base, CE2Request_Base, CE2Reply_Base, CUpdate_comment_Base, CSeqTree_node_Base::C_Children, CFeature_evidence_Base, CCdd_pref_node_descr_Base, CCdd_id_Base, CCdd_descr_Base, CBlast4_value_Base, CBlast4_subject_Base, CBlast4_request_body_Base, CBlast4_reply_body_Base, CBlast4_queries_Base, CBlast4_cutoff_Base, CBlast4_common_options_db_restriction_by_organism_Base, CTitle_Base::C_E, CId_pat_Base::C_Id, CCit_art_Base::C_From, CAuth_list_Base::C_Names, CArticleId_Base, CAffil_Base, CFeatureTypesBrowser, CAlnMultiWidget, CUIToolRegistry::ISelector, CViewDescriptor_Base::C_Data, CViewDataLink_Base::C_Fingerprint, CProjectItem_Base::C_Item, CPluginValueConstraint_Base, CPluginValue_Base, CPluginReplyAction_Base, CPluginArg_Base::C_Data, CGBenchServiceRequest_Base, CGBenchServiceReply_Base, CDataHandleAction_Base::C_Action, CNetScheduleAdmin, CFilter_Base::C_FF::C_E_FF, CComponentList_Base::C_E_ComponentList::C_SAD, CSupDataDesc_Base::C_E_SupDataDesc, CSupDataArray_Base::C_FDIBSTU, CSpectrumInstrument_Base::C_E_SpectrumInstrument, CSpectrum_Base::C_SS::C_E_SS, CSource_Base::C_E, CSampleDescription_Base::C_E_SampleDescription, CProcessingMethod_Base::C_E, CIonSelection_Base::C_E, CDetector_Base::C_E, CAnalyzer_Base::C_E, CAdditional_Base::C_E, CActivation_Base::C_E, CAcquisition_Base::C_E_Acquisition, CMarkov_chain_params_Base::C_E_Probabilities, CGnomon_param_Base::C_Param
• select_value : CRangeMultimap< Mapped, Position >, CRangeMap< Mapped, Position >, CRangeMapBase< Traits >
• SelectAll() : CwxTableListCtrl, CSelectionControl
• selectAllCDs() : CDFamily
• SelectBaseStep() : CRegularGridGen
• SelectBasicScoreTables() : oligofar::CScoreTbl, oligofar::CAlignerBase
• SelectBestReadingFrame() : CGnomonEngine
• SelectBlocks() : BlockMultipleAlignment
• SelectBlocksIsOn() : ViewerWindowBase
• SelectByDistance() : StructureObject, StructureSet
• selectByGI() : SeqTree
• selectByRowID() : SeqTree
• selectByTax() : SeqTree
• selectCDs() : CDFamily
• SelectChoice() : CClassInfoHelper< C >
• SelectDatabases() : CBLAST_DB_Dialog
• SelectDataRow() : CFeatTableWidget
• SelectDefaultIds() : IHitMatrixDataSource, CHitMatrixDataSource
• SelectDelayBuffer() : CClassInfoHelper< C >
• selected : IDMSearchTool::TFilters, IDMSearchTool::TConversions, SeqItem, CDNode
• selected_only : SCSVExportParams
• SelectedAtom() : StructureSet
• selectedItem : CDDBookRefDialog
• selectedLeaves : TaxNode
• SelectedRange() : DisplayRowFromString, DisplayRowFromSequence, DisplayRowFromAlignment, DisplayRow, BlockMultipleAlignment
• SelectedRectangle() : ViewableAlignment, SequenceDisplay
• SelectFeature() : CFeatTableWidget
• SelectFormat() : CFileLoadOptionPanel
• SelectGenes() : CGeneSelector
• SelectGlyph() : CHitMatrixGraph
• SelectHitTest() : CCrossAlnRenderer
• SelectIds() : IHitMatrixDataSource, CHitMatrixDataSource
• Selecting() : CTextItemPanel
• SelectInputType() : CBLASTSearchOptionsPanel
• SelectionChangedCallback() : ShowHideManager, ShowHideCallbackObject
• SelectionName() : CToupper_Base::C_Data, CTolower_Base::C_Data, CSubs_Base::C_E_Subs, CStrip_Base::C_E_Strip, CRule_Base::C_Data, CPad_Base::C_E_Pad, CObjectUrl_Base::C_Data, CObjectUrl_Base::C_Data::C_Rule, CObjectUrl_Base::C_Data::C_BaseData::C_Rule, CObjectList_Base::C_Data, CNormalize_Base::C_Data, CLink_Base::C_Selector, CApad_Base::C_E_Apad, CItem_Base::C_E_Item, CESummaryResult_Base::C_Data, CTranslationStack_Base::C_Data, CESearchResult_Base::C_Data, CLinkSetDb_Base::C_Data, CLinkSet_Base::C_Data, CLinkSet_Base::C_Data::C_Links::C_LL, CIdUrlSet_Base::C_Data, CIdCheckList_Base::C_II::C_E_II, CEInfoResult_Base, CT3StatusFlags_Base::C_Value, CT3Request_Base, CT3Reply_Base, CTaxon1_resp_Base, CTaxon1_req_Base, CSeq_submit_Base::C_Data, CSeqTestResults_Base::C_Source, CSeqTable_sparse_index_Base, CSeqTable_single_data_Base, CSeqTable_multi_data_Base, CID2S_Seq_loc_Base, CID2S_Chunk_Data_Base::C_Id, CID2S_Chunk_Content_Base, CID2S_Bioseq_Ids_Base::C_E, CSeq_entry_Base, CSeq_graph_Base::C_Graph, CSeq_loc_Base, CSeq_id_Base, CTrna_ext_Base::C_Aa, CSeqFeatData_Base, CRsite_ref_Base, CRNA_ref_Base::C_Ext, COrgName_Base::C_Name, CGenetic_code_Base::C_E, CFeat_id_Base, CCode_break_Base::C_Aa, CSeqEdit_Id_Base, CSeqEdit_Cmd_ReplaceAnnot_Base::C_Data, CSeqEdit_Cmd_RemoveAnnot_Base::C_Data, CSeqEdit_Cmd_ChangeSetAttr_Base::C_Data, CSeqEdit_Cmd_ChangeSeqAttr_Base::C_Data, CSeqEdit_Cmd_AddAnnot_Base::C_Data, CSeqEdit_Cmd_AddAnnot_Base::C_Search_param, CSeqEdit_Cmd_AddAnnot_Base::C_Search_param::C_Obj, CSeqEdit_Cmd_Base, CEMBL_dbname_Base, CSpliced_seg_modifier_Base, CSpliced_exon_chunk_Base, CSeq_align_Base::C_Segs, CScore_Base::C_Value, CProduct_pos_Base, CSeqdesc_Base, CSeq_hist_Base::C_Deleted, CSeq_ext_Base, CSeq_data_Base, CSeq_annot_Base::C_Data, CNumbering_Base, CDelta_seq_Base, CAnnotdesc_Base, CAnnot_id_Base, CRMRequest_Base, CRMReply_Base, CPub_set_Base, CPub_Base, CProject_item_Base, CProjdesc_Base, CPC_XRefData_Base, CPC_StereoCenter_Base, CPC_Source_Base, CPC_InfoData_Base::C_Value, CPC_CompoundType_Base::C_Id, CPC_ResultType_Base::C_Constraints, CPC_AssaySubmit_Base::C_Assay, CPC_AssayData_Base::C_Value, CPrintForm_Base, CNcbi_mime_asn1_Base, CEntrez_general_Base::C_Data, CBiostruc_seqs_aligns_cdd_Base::C_Seq_align_data, CResidue_pntrs_Base, CRegion_pntrs_Base::C_Region, CRegion_boundary_Base, CMove_Base, CChem_graph_pntrs_Base, CBiostruc_feature_set_descr_Base, CBiostruc_feature_Base::C_Location, CBiostruc_feature_Base::C_Property, CSurface_coordinates_Base::C_Surface, CModel_descr_Base, CModel_coordinate_set_Base::C_Coordinates, CCoordinates_Base, CAtomic_temperature_factors_Base, CResidue_graph_pntr_Base, CBiostruc_source_Base::C_Version_of_database, CBiostruc_id_Base, CBiostruc_descr_Base, CBiomol_descr_Base, CMla_request_Base, CMla_back_Base, CID2_Seq_id_Base, CID2_Request_Get_Blob_Info_Base::C_Blob_id, CID2_Request_Base::C_Request, CID2_Reply_Base::C_Reply, CID1server_request_Base, CID1server_back_Base, CGC_Replicon_Base::C_Sequence, CGC_GenomicPart_Base, CUser_field_Base::C_Data, CPerson_id_Base, CObject_id_Base, CInt_fuzz_Base, CDate_Base, CMaps_Base::C_Method, CEntrez2_boolean_element_Base, CE2Request_Base, CE2Reply_Base, CUpdate_comment_Base, CSeqTree_node_Base::C_Children, CFeature_evidence_Base, CCdd_pref_node_descr_Base, CCdd_id_Base, CCdd_descr_Base, CBlast4_value_Base, CBlast4_subject_Base, CBlast4_request_body_Base, CBlast4_reply_body_Base, CBlast4_queries_Base, CBlast4_cutoff_Base, CBlast4_common_options_db_restriction_by_organism_Base, CTitle_Base::C_E, CId_pat_Base::C_Id, CCit_art_Base::C_From, CAuth_list_Base::C_Names, CArticleId_Base, CAffil_Base, CViewDescriptor_Base::C_Data, CViewDataLink_Base::C_Fingerprint, CProjectItem_Base::C_Item, CPluginValueConstraint_Base, CPluginValue_Base, CPluginReplyAction_Base, CPluginArg_Base::C_Data, CGBenchServiceRequest_Base, CGBenchServiceReply_Base, CDataHandleAction_Base::C_Action, CFilter_Base::C_FF::C_E_FF, CComponentList_Base::C_E_ComponentList::C_SAD, CSupDataDesc_Base::C_E_SupDataDesc, CSupDataArray_Base::C_FDIBSTU, CSpectrumInstrument_Base::C_E_SpectrumInstrument, CSpectrum_Base::C_SS::C_E_SS, CSource_Base::C_E, CSampleDescription_Base::C_E_SampleDescription, CProcessingMethod_Base::C_E, CIonSelection_Base::C_E, CDetector_Base::C_E, CAnalyzer_Base::C_E, CAdditional_Base::C_E, CActivation_Base::C_E, CAcquisition_Base::C_E_Acquisition, CMarkov_chain_params_Base::C_E_Probabilities, CGnomon_param_Base::C_Param
• selections : SeqItem
• selectItem : CDDRefDialog
• SelectItem() : CSelectionControl, CTextPanelContext
• SelectItems() : CSelectionControl
• SelectMatches() : CCompareSeqRegions
• selectMode : OpenGLRenderer
• selectNode() : SeqTree
• SelectNone() : CSeq_entry_EditHandle, CScope_Impl
• SelectObjByRect() : CSeqGraphicRenderer, CFeaturePanel
• SelectObject() : CSeqGraphicPane, CTextSelHandler, CSeqTextWidget, CSeqTextPane, CSeqGraphicWidget, CSeqGraphicRenderer, CSelectionVisitor
• SelectObjectSig() : CSeqGraphicRenderer
• SelectOptionByLabel() : COpenDlg
• selector : DState, EState
• selectorCode : LeaveOneOutParams
• selectorMtf : DState, EState
• SelectProjectByObjects() : SProjectSelectorParams
• SelectRadio() : CMenuItem
• SelectScreenStep() : CRegularGridGen
• SelectSelection() : CSelectionVisitor
• SelectSeq() : CSeq_entry_EditHandle, CSeq_entry_Info, CTSE_ScopeInfo, CScope_Impl
• SelectSeqLoc() : CSeqGraphicPane, CSeqGraphicWidget
• SelectSet() : CSeq_entry_EditHandle, CSeq_entry_Info, CTSE_ScopeInfo, CScope_Impl
• SelectSplit() : CBDB_BlobDeMuxSplit
• selectTaxNode() : TaxTreeData
• selectTaxTreeLeaf() : TaxTreeData
• SelectToolByName() : CDataMiningView, CDataMiningPanel
• selectX : OpenGLRenderer
• selectY : OpenGLRenderer
• SElement : CAttrRangeCollection< Attr, Position >
• SelEnd() : CTextItemPanel
• SelenocysteineToNote() : CFlatFileConfig
• self() : xml::node
• self_const_pointer_type : CTrSequence< bitst, bitsc >
• self_const_reference_type : CTrSequence< bitst, bitsc >
• self_pointer_type : CTrSequence< bitst, bitsc >
• self_reference_type : CTrSequence< bitst, bitsc >
• self_type : CTrSequence< bitst, bitsc >::C_ReverseIterator< Item >, CTrSequence< bitst, bitsc >, CTrVector< T >, mu::ParserErrorMsg, db_multimap< K, T >, db_map< K, T >
• SelfAlignedSeqCount() : CSeqIdAlignBitmap< TSeqAlignSeqIdVec >
• SelfClosedTag() : CObjectIStreamXml
• SelfCloseTagEnd() : CObjectOStreamXml
• SelMove() : CTextItemPanel
• SelStart() : CTextItemPanel
• sen : CAnyIntron
• Send() : CSequenceGotoDlg, CEventHandler, CDB_RPCCmd, CDB_LangCmd, CODBC_BCPInCmd, CODBC_RPCCmd, CODBC_LangCmd, CMySQL_LangCmd, I_BaseCmd, impl::CBaseCmd, CDBL_BCPInCmd, CDBL_RPCCmd, CDBL_LangCmd, CTL_BCPInCmd, CTL_RPCCmd, CTL_LangCmd, ctlib::Command, CRemoteAppResultSB_Executer, CRemoteAppRequestSB, CRemoteAppResultMB_Executer, CRemoteAppRequestMB, IRemoteAppResult_Executer, IRemoteAppRequest, CServer_Monitor, IServer_Monitor, CDatagramSocket
• send_data_started : _cs_command
• SendChunk() : CUTTPWriter, CDB_SendDataCmd, CODBC_SendDataCmd, I_SendDataCmd, impl::CSendDataCmd, CDBL_SendDataCmd, CTL_SendDataCmd
• SendCommand() : StructureWindow, FileMessenger
• SendControlSymbol() : CUTTPWriter
• SendData() : CDB_Connection, CODBC_Connection, CMySQL_Connection, I_Connection, impl::CConnection, CDBL_Connection, CTL_Connection, ctlib::Command
• SendDataCmd() : CDB_CursorCmd, CDB_Connection, CODBC_CursorCmdExpl, CODBC_CursorCmd, CODBC_Connection, CMySQL_Connection, I_Connection, I_CursorCmd, impl::CConnection, impl::CBaseCmd, CDBL_CursorCmd, CDBL_Connection, CTL_CursorCmdExpl, CTL_CursorCmd, CTL_Connection
• SendEditEvent() : CPhyloTreeWidget
• SendFeedback() : CFeedbackReport
• SendFeedbackReport() : CGBenchService
• SendInit() : CGBenchService
• SendInternal() : CTL_LRCmd
• SendMessage() : CServer_Monitor
• SendOrgRefList() : CTaxon3
• SendPendingCommands() : FileMessenger
• SendReply() : FileMessenger
• SendRequest() : CTaxon3, CTaxon1
• SendRow() : CDB_BCPInCmd, I_BCPInCmd
• SendSelChangedEvent() : CPhyloTreeWidget
• SendSql() : CStatement, CCallableStatement, ICallableStatement, IStatement
• SendString() : CServer_Monitor
• SendToBrowser() : CBrowserUtils
• SEntry : CMetaRegistry
• SEnumCInfo() : CEnumDataType::SEnumCInfo
• SEnvValue() : CNcbiEnvironment::SEnvValue
• Separate() : CLDS_GBReleaseReadHook
• SeparateStrands() : CAlignmentSmear
• Separator : CObjectOStream
• seq : pythonpp::CSequnceHelper< T >::const_iterator, pythonpp::CSequnceHelper< T >::iterator, TSimpleSeq, TrimAlignment, ProjectCDS, SSequence, CPSeq, CNSeq, BlastSeqSrcGetSeqArg, BlastCompo_QueryInfo
• seq1_index : CMultiAlignerOptions::SConstraint
• seq1_start : CAlnTableDS::SAlignment, CMultiAlignerOptions::SConstraint
• seq1_stop : CAlnTableDS::SAlignment, CMultiAlignerOptions::SConstraint
• seq2_index : CMultiAlignerOptions::SConstraint
• seq2_start : CAlnTableDS::SAlignment, CMultiAlignerOptions::SConstraint
• seq2_stop : CAlnTableDS::SAlignment, CMultiAlignerOptions::SConstraint
• seq_1 : CSRSearch::SSearchData
• seq_2 : CSRSearch::SSearchData
• seq_annot : SAnnotPiece
• Seq_annot_CanGetDb() : CSeq_annot_Handle
• Seq_annot_CanGetDesc() : CSeq_annot_Handle
• Seq_annot_CanGetId() : CSeq_annot_Handle
• Seq_annot_CanGetName() : CSeq_annot_Handle
• Seq_annot_GetDb() : CSeq_annot_Handle
• Seq_annot_GetDesc() : CSeq_annot_Handle
• Seq_annot_GetId() : CSeq_annot_Handle
• Seq_annot_GetName() : CSeq_annot_Handle
• Seq_annot_IsSetDb() : CSeq_annot_Handle
• Seq_annot_IsSetDesc() : CSeq_annot_Handle
• Seq_annot_IsSetId() : CSeq_annot_Handle
• Seq_annot_IsSetName() : CSeq_annot_Handle
• seq_arg : BlastKappa_SequenceInfo
• seq_citer_type : CSymDustMasker
• seq_data : SAnnotPiece
• seq_descr : SAnnotPiece
• seq_end_ : CSubjectMap_Factory::SLIdMapElement
• seq_entry_ : CSequenceIStream::CSeqData
• seq_from_index_ : CIndexedDb
• seq_id : SFastaFileMap::SFastaEntry, SLDS_SeqId_List
• seq_id_list : dup_lookup_table, SLDS_TablesCollection
• seq_id_list_type : dup_lookup_table
• seq_ids : CGuideTree::STreeInfo, SLDS_ObjectDB
• Seq_idToString() : CAliToSeq_align
• seq_index : CMultiAligner::SSegmentLoc
• seq_positions_ : CSequenceIStreamFasta
• seq_ranges : SSeqDB_SeqSrc_Data, BLAST_SequenceBlk
• seq_ranges_allocated : BLAST_SequenceBlk
• seq_src : BlastKappa_SequenceInfo
• seq_start : CDisplaySeqalign::SInsertInformation
• seq_start_ : CSubjectMap_Factory::SLIdMapElement, CSubjectMap_Factory_TBase::SSeqInfo
• seq_store_ : CSubjectMap_Factory_Base, CSubjectMap
• seq_store_start() : CSubjectMap_Factory_Base
• seq_t : CSymDustMasker
• seq_vector : SMultiSeqSrcNewArgs
• SeqAlign() : SeqAlign
• SeqAnnotList : ASNDataManager, AlignmentSet, AlignmentUtility
• SeqCount() : CSeqIdAlignBitmap< TSeqAlignSeqIdVec >
• seqdb : SSeqDB_SeqSrc_Data
• seqdb_ : CMaskBDBReader, CSequenceIStreamBlastDB
• SeqEntryFinalize() : CScopedProcess, CSeqEntryProcess
• SeqEntryHasSeqId() : CDUpdater
• SeqEntryInitialize() : CTitleProcess, CScopedProcess, CProsplignProcess, CGeneOverlapProcess, CFastaProcess, CDeflineProcess, CSeqEntryProcess
• seqEntryList : ASNDataManager
• SeqEntryList : SequenceSet, ASNDataManager, SequenceSet, AlignmentUtility
• SeqEntryProcess() : CTitleProcess, CProsplignProcess, CNullProcess, CMacroTestProcess, CGeneOverlapProcess, CFastaProcess, CDeflineProcess, CCleanupProcess, CSeqEntryProcess
• SeqFromIndex() : CIndexedDb
• seqid : dup_lookup_table, SGFFrec, CSeqDBGiList::SSeqIdOid
• seqId : SeqItem
• seqID : ALICORD
• SeqIdList : MoleculeIdentifier, Sequence
• seqIDs : MoleculeIdentifier, Sequence
• SeqidToBioseq() : CSeqDB
• SeqidToBioseqMap : SequenceTable
• SeqidToOid() : CRemoteBlastDbAdapter, CLocalBlastDbAdapter, CSeqDBIsam, IBlastDbAdapter, CSeqDB
• SeqIdToOid() : CSeqDBGiList
• SeqidToOids() : CSeqDBVol, CSeqDBImpl, CSeqDB
• SeqIdTypeToPriority() : CCdDbPriority
• SeqIdTypeToSource() : CCdDbPriority
• SeqIdTypeToSourceCode() : CCdDbPriority
• SeqItem() : SeqItem
• SeqLen() : CSeqScores
• seqlen : SDubiousShortSequence
• seqlist_id : SLDS_ObjectDB
• seqloc : TGenfo, CDisplaySeqalign::SAlnSeqlocInfo, CDisplaySeqalign::FeatureInfo, CBlastSearchQuery, SSeqLoc
• seqloc_array : BlastMaskLoc
• SeqLocCharOption : CDisplaySeqalign
• SeqLocColorOption : CDisplaySeqalign
• seqLocFrom : UnalignedInterval
• SeqLocIntersect() : CAutoDefExonListClause
• seqLocs : IndexAlnLocToSeqLocRow
• SeqLocString() : CGeneOverlapProcess
• seqLocTo : UnalignedInterval
• SeqLocToBioseq() : CSeqUtils
• seqmap_ : CIndexedDb
• seqName : TaxNode
• SeqNameMode : SeqTree
• seqnum : dup_lookup_table::sample_loc, CSRSearch::SSRResult
• SeqPtr() : CSeqScores
• seqs_ungapped_passed : BlastGappedStats
• SeqSpan() : CWiggleRecord, CWiggleTrack, CWiggleData
• SeqStart() : CWiggleRecord, CWiggleTrack, CWiggleData
• SeqStop() : CWiggleTrack
• SeqSwapper() : SeqSwapper
• SeqTInDels() : CSeqScores
• SeqToScreen() : CRenderingContext
• SeqToScreenX() : CRenderingContext
• SeqToScreenXInModelUnit() : CRenderingContext
• seqToUnseq : DState
• SeqTree() : SeqTree
• SeqTreeAPI() : SeqTreeAPI
• SeqTreeAsnizer() : SeqTreeAsnizer
• SeqTreeRootedLayout() : SeqTreeRootedLayout
• Sequence() : Sequence, CGBUserTypeReg, Sequence
• sequence : NodeData, DisplayRowFromSequence, Molecule, IndexAlnLocToSeqLocRow, BLAST_SequenceBlk
• sequence_allocated : BLAST_SequenceBlk
• sequence_data : SAlignRawSeq, SDubiousShortSequence
• sequence_gis : SeqAlign
• sequence_proximity() : CReadBlastApp
• sequence_start : BLAST_SequenceBlk
• sequence_start_allocated : BLAST_SequenceBlk
• sequence_type : CSymDustMasker
• sequenceAlignments : ASNDataManager
• sequenceArea : SequenceViewerWidget, SequenceViewerWidget_TitleArea
• SequenceBegin() : oligofar::CSeqVecProcessor::ICallback, oligofar::CSeqScanner, oligofar::CFilter, oligofar::CBitmaskBuilder
• SequenceBuffer() : oligofar::CSeqVecProcessor::ICallback, oligofar::CSeqScanner, oligofar::CFilter, oligofar::CBitmaskBuilder
• SequenceDisplay : SequenceDisplay, ViewerWindowBase, ViewerBase, UpdateViewerWindow, UpdateViewer, SequenceViewerWindow, SequenceViewer
• SequenceDNA() : CGBUserTypeReg
• SequenceEnd() : oligofar::CSeqVecProcessor::ICallback, oligofar::CSeqScanner, oligofar::CFilter, oligofar::CBitmaskBuilder
• SequenceList : UpdateViewer, SequenceViewer, SequenceSet, SequenceDisplay, ASNDataManager, BlockMultipleAlignment, SequenceSet, BlockMultipleAlignment
• SequenceMap : TaxonomyTreeNode
• SequencePosToSourcePos() : CSeqTextDataSource
• SequenceProtein() : CGBUserTypeReg
• sequences : SAlignFileRaw, TaxonomyTreeNode, BlockMultipleAlignment, SAlignmentFile, SequenceSet
• sequenceSet : StructureSet, AlignmentManager
• SequenceSet() : SequenceSet
• sequenceString : Sequence
• SequenceTable() : SequenceTable
• SequenceType() : CFormatGuess
• sequenceViewer : SequenceViewerWindow, AlignmentManager
• SequenceViewer : SequenceViewer, SequenceDisplay
• SequenceViewerList : Messenger
• sequenceViewers : Messenger
• SequenceViewerWidget : SequenceViewerWidget, SequenceViewerWidget_SequenceArea
• SequenceViewerWidget_SequenceArea() : SequenceViewerWidget_SequenceArea
• SequenceViewerWidget_TitleArea() : SequenceViewerWidget_TitleArea
• SequenceViewerWindow : SequenceViewerWindow, SequenceViewer
• sequenceWindow : SequenceViewer
• SequenceWindowsSave() : Messenger
• seqvector : SSeqDB_SVCISource
• serial : SHEAP_tag
• serial_iterator_type : bm::iterator_deserializer< BV, SerialIterator >
• serial_stream_be : bm::operation_deserializer< BV >
• serial_stream_current : bm::operation_deserializer< BV >
• serial_stream_iterator() : bm::serial_stream_iterator< DEC >
• serial_stream_le : bm::operation_deserializer< BV >
• Serialize() : CRemoteAppResultSB_Impl, CRemoteAppRequestSB_Impl, CRemoteAppResultMB_Impl, CRemoteAppRequestMB_Impl, IRemoteAppResult_Impl, IRemoteAppRequest_Impl, CBDB_BlobMetaContainer, CBDB_ExtBlobMap, CCgiRequest
• serialize() : bm::serializer< BV >
• SerializeFrom() : SSnpFilter
• serializer() : bm::serializer< BV >
• SerializeTo() : SSnpFilter
• Series : CMSBasicMatchedPeak
• SeriesChargePairList : CLadderContainer
• servcharset : tds_dblib_dbprocess
• server : _hdbc, _sql_error, tds_message, CNetScheduleAdmin::SServerQueueList
• server_addr : tds_login
• server_charset : tdsiconvinfo, tds_locale, tds_connection, tds_login
• server_name : impl::SLoginData, tds_connection, tds_login
• servermsg : cs_diag_msg_svr
• ServerName() : CDB_Connection, I_Connection, impl::CConnection
• service : SServiceConnectorTag, SConnNetInfo
• session : SOCK_tag
• session_id : CNetScheduleJob
• set : bm::bvmini< N >, bm::miniset< A, N >, bm::bvector< Alloc, MS >, CSRSearch::CResCache, REG_tag, CAnyIntron
• Set() : CSimpleClipboard, CNamespace, CSeqDBFiltInfo, CSeqDBAutoFree, AnnotObjTrait< CSeq_graph >, AnnotObjTrait< CSeq_align >, AnnotObjTrait< CSeq_feat >, pythonpp::CObject, pythonpp::bind::CBase, CDB_UserHandler_Wrapper, Vector, CRegexp, COpenRange< Position >, CNcbiMatrix< T >, CIntervalTree, CAlignRange< Position >, CAliasBase< TPrim >, CConstObjectInfo, CDescription_Base, CToupper_Base, CTolower_Base, CRule_Base, CObjectList_Base, CNormalize_Base, CESummaryResult_Base, CTranslationStack_Base, CSeqDBIdSet_Vector, CAlnMixSequences, CAlnMixMatches, CAsnSizer, SRegisterLoaderInfo< TLoader >, CMappedFeat, DBFunc< CSeq_entry_EditHandle, CSeq_descr >, CHeapScope, DBFunc< Handle, CSeq_descr >, MemetoFunctions< TEditHandle, CSeq_descr >, DBFunc< THandle, T >, MemetoFunctions< TEditHandle, T >, DBFunc< CBioseq_set_EditHandle, CBioseq_set::TDate >, MemetoFunctions< CBioseq_set_EditHandle, CBioseq_set::TDate >, DBFunc< CBioseq_set_EditHandle, CBioseq_set::TColl >, MemetoFunctions< CBioseq_set_EditHandle, CBioseq_set::TColl >, DBFunc< CBioseq_set_EditHandle, CBioseq_set::TId >, MemetoFunctions< CBioseq_set_EditHandle, CBioseq_set::TId >, DBFunc< CBioseq_set_EditHandle, CBioseq_set::TClass >, MemetoFunctions< CBioseq_set_EditHandle, CBioseq_set::TClass >, DBFunc< CBioseq_set_EditHandle, CBioseq_set::TRelease >, MemetoFunctions< CBioseq_set_EditHandle, CBioseq_set::TRelease >, DBFunc< CBioseq_set_EditHandle, CBioseq_set::TLevel >, MemetoFunctions< CBioseq_set_EditHandle, CBioseq_set::TLevel >, DBFunc< CBioseq_EditHandle, CSeq_inst::THist >, MemetoFunctions< CBioseq_EditHandle, CSeq_inst::THist >, DBFunc< CBioseq_EditHandle, CSeq_inst::TExt >, MemetoFunctions< CBioseq_EditHandle, CSeq_inst::TExt >, DBFunc< CBioseq_EditHandle, CSeq_inst::TSeq_data >, MemetoFunctions< CBioseq_EditHandle, CSeq_inst::TSeq_data >, DBFunc< CBioseq_EditHandle, CSeq_inst::TFuzz >, MemetoFunctions< CBioseq_EditHandle, CSeq_inst::TFuzz >, DBFunc< CBioseq_EditHandle, CSeq_inst::TTopology >, MemetoFunctions< CBioseq_EditHandle, CSeq_inst::TTopology >, DBFunc< CBioseq_EditHandle, CSeq_inst::TLength >, MemetoFunctions< CBioseq_EditHandle, CSeq_inst::TLength >, DBFunc< CBioseq_EditHandle, CSeq_inst::TStrand >, MemetoFunctions< CBioseq_EditHandle, CSeq_inst::TStrand >, DBFunc< CBioseq_EditHandle, CSeq_inst::TMol >, MemetoFunctions< CBioseq_EditHandle, CSeq_inst::TMol >, DBFunc< CBioseq_EditHandle, CSeq_inst::TRepr >, MemetoFunctions< CBioseq_EditHandle, CSeq_inst::TRepr >, DBFunc< CBioseq_EditHandle, CSeq_inst >, MemetoFunctions< CBioseq_EditHandle, CSeq_inst >, CMappedGraph, CField_set_Base, CDependent_field_set_Base, CComment_set_Base, CTSeqSet_Base, CSequenceOfInt_Base, CSeq_test_result_set_Base, CID2S_Seq_map_Info_Base, CID2S_Seq_data_Info_Base, CID2S_Bioseq_set_Ids_Base, CID2S_Bioseq_Ids_Base, CTextseq_id, CSeq_loc_mix_Base, CSeq_loc_equiv_Base, CSeq_id, CPacked_seqint_Base, CRNA_qual_set_Base, CPCRReactionSet_Base, CPCRPrimerSet_Base, CPartialOrgName_Base, CMultiOrgName_Base, CGenetic_code_table_Base, CGenetic_code_Base, CClone_seq_set_Base, CSeq_align_set_Base, CScore_set_Base, CSeq_descr_Base, CSeg_ext_Base, CRef_ext_Base, CMap_ext_Base, CDelta_ext_Base, CAnnot_descr_Base, CRemap_result_Base, CPub_equiv_Base, CPC_Substances_Base, CPC_Conformers_Base, CPC_Compounds_Base, CPC_AssayContainer_Base, CMSSpectrumset_Base, CMSSearchSettingsSet_Base, CMSModSpecSet_Base, CMSBioseqSet_Base, CPrintTemplateSet_Base, CBiostruc_script_Base, CAlternate_conformation_ids_Base, CAtom_pntr_set_Base, CMim_entries_Base, CINSDTagsetRuleSet_Base, CINSDTags_Base, CINSDTagNames_Base, CINSDSet_Base, CID2_Request_Packet_Base, CID2_Params_Base, CID2_Blob_Seq_ids_Base, CID1server_debug_Base, CHG_CommentaryContainer_Base, CHG_AlignmentSet_Base, CGBTagsetRuleSet_Base, CGBTags_Base, CGBTagNames_Base, CGBSet_Base, CFeatDispGroupSet_Base, CFeatDefSet_Base, CEntrezgene_Set_Base, CCn3d_style_settings_set_Base, CCdd_tree_set_Base, CCdd_set_Base, CCdd_pref_node_descr_set_Base, CCdd_org_ref_set_Base, CCdd_id_set_Base, CCdd_descr_set_Base, CAlign_annot_set_Base, CBlast_def_line_set_Base, CBlast4_parameters_Base, CBlast4_get_sequences_reply_Base, CBlast4_get_seq_parts_reply_Base, CBlast4_get_programs_reply_Base, CBlast4_get_paramsets_reply_Base, CBlast4_get_parameters_reply_Base, CBlast4_get_matrices_reply_Base, CBlast4_get_databases_reply_Base, CBlast4_finish_params_reply_Base, CBlast4_get_search_strategy_reply_Base, CNodeSet_Base, CNodeFeatureSet_Base, CFeatureDictSet_Base, CTitle_Base, CPubStatusDateSet_Base, CArticleIdSet_Base, CSimpleClipboard, CSurveyBrowser, CLayoutGroup, CPhyNewickNode, CRgbaColor, mu::ParserToken< TBase, TString >, CClipboard, CGuiRegistry, CGuiRegistry::CReadWriteView, CPluginMessageChain_Base, CPluginInfoSet_Base, CPluginCache_Base, CPluginArgSet_Base, CAbstractProjectItem, CSettingsSet, impl::CDB_Params::SParam, CDBParams, impl::CDBBindedParams, CBDB_FieldLString, CBDB_FieldString, CBDB_FieldFixedByteString, CBDB_FieldSimpleFloat< T >, CBDB_FieldSimpleInt< T >, CTimeout, CTimeSpan, IRWRegistry, CThreadSystemID, CNcbiEnvironment, CMutableAtomicCounter, CAtomicCounter, CSafeStaticRef< T >, CSafeStaticPtr< T >, CParam< TDescription >, CAutoInitRef< T >, CAutoInitPtr< T >, CTrigger, CScoreVector< Key, Score >, CRawScoreVector< Key, Score >, CTaxNRItem, AMatrix_base, CRegexp_loc, CSource_Base, CProcessingMethod_Base, CIonSelection_Base, CDetector_Base, CAnalyzer_Base, CAdditional_Base, CActivation_Base, CGnomon_params_Base
• Set5PrimeCdsLimit() : CCDSInfo
• Set_AddToExistingProject() : CDataLoadingOptions
• set_all_one() : bm::blocks_manager< Alloc, MS >
• set_all_options() : pcrecpp::RE_Options
• set_all_zero() : bm::blocks_manager< Alloc, MS >
• set_ambig_unit() : CSeqMaskerIstat
• set_at() : CElementaryMatching::CBoolVector
• set_bit() : gap_vector, bm::bvector_mini< A >, bm::bvector< Alloc, MS >
• set_bit_and() : bm::bvector< Alloc, MS >
• set_bit_conditional() : bm::bvector< Alloc, MS >
• set_bit_conditional_impl() : bm::bvector< Alloc, MS >
• set_bit_no_check() : bm::bvector< Alloc, MS >
• set_block() : bm::blocks_manager< Alloc, MS >
• set_block_all_set() : bm::blocks_manager< Alloc, MS >
• set_block_bit() : bm::blocks_manager< Alloc, MS >
• set_block_gap() : bm::blocks_manager< Alloc, MS >
• set_block_ptr() : bm::blocks_manager< Alloc, MS >
• set_capacity() : array_set< T, Cmp >, array_map< K, V, Cmp, kCapacityIncrement >
• set_caseless() : pcrecpp::RE_Options
• Set_CharData() : CToupper_Base::C_Data, CTolower_Base::C_Data, CSubs_Base::C_E_Subs, CStrip_Base::C_E_Strip, CRule_Base::C_Data, CPad_Base::C_E_Pad, CNormalize_Base::C_Data, CApad_Base::C_E_Apad, CItem_Base::C_E_Item
• set_compression_level() : bm::serializer< BV >
• set_content() : xml::node
• Set_CreateNewProject() : CDataLoadingOptions
• Set_CreateSeparateProjects() : CDataLoadingOptions
• set_data() : xml::attributes, xml::attributes::attr
• Set_DecideLater() : CDataLoadingOptions
• set_doc_data() : xml::impl::doc_impl, xml::document
• set_doc_data_from_xslt() : xml::document
• set_dollar_endonly() : pcrecpp::RE_Options
• set_dotall() : pcrecpp::RE_Options
• set_encoding() : xml::document
• set_error_message() : xml::event_parser
• set_extended() : pcrecpp::RE_Options
• set_extra() : pcrecpp::RE_Options
• set_first_parent_() : tree< T, tree_node_allocator >::fixed_depth_iterator
• set_gap_levels() : bm::bvector< Alloc, MS >
• set_glen() : bm::blocks_manager< Alloc, MS >
• set_head() : tree< T, tree_node_allocator >
• set_is_standalone() : xml::document
• set_match_limit() : pcrecpp::RE_Options
• set_match_limit_recursion() : pcrecpp::RE_Options
• set_max_count() : CSeqMaskerIstat
• set_max_score : CWinMaskConfig
• set_min_count() : CSeqMaskerIstat
• set_min_score : CWinMaskConfig
• set_multiline() : pcrecpp::RE_Options
• set_name() : xml::node
• set_namespace() : xml::node, xml::attributes::attr
• set_new_blocks_strat() : bm::bvector< Alloc, MS >
• set_no_auto_capture() : pcrecpp::RE_Options
• set_node_data() : xml::node_set, xml::node
• set_optimization_data() : CSeqMaskerIstat
• set_parent_() : tree< T, tree_node_allocator >::sibling_iterator
• set_pos() : bm::encoder
• set_position : CBDB_ResultStoreBase::TResultSetPosition
• set_range() : bm::bvector< Alloc, MS >
• set_range_no_check() : bm::bvector< Alloc, MS >
• set_root_node() : xml::impl::doc_impl, xml::document
• set_save_comments() : pcrecpp::Scanner
• set_textend() : CSeqMaskerIstat
• set_threshold() : CSeqMaskerIstat
• set_ungreedy() : pcrecpp::RE_Options
• set_unit_size() : CSeqMaskerUsetSimple, CSeqMaskerUsetArray, CSeqMaskerIstat
• set_use_max_count() : CSeqMaskerIstat
• set_use_min_count() : CSeqMaskerIstat
• set_utf8() : pcrecpp::RE_Options
• set_version() : xml::document
• SetA() : CSeq_graph_Base, CSeq_bond_Base, CNum_real_Base, CLength_distribution_params_Base
• SetAa() : CTrna_ext_Base, CCode_break_Base
• SetAaPosition() : CFxnSet_Base::C_Attlist
• SetAbbr() : CMedlars_record_Base
• SetAbove() : CPC_StereoTShape_Base, CPC_StereoTrigonalBiPyramid_Base, CPC_StereoTetrahedral_Base
• SetAbr() : CTitle_Base::C_E
• SetAbstract() : CMedline_entry_Base, CCit_pat_Base
• SetAbundance() : CMSSpectrum_Base
• SetAc() : CPC_ResultType_Base
• SetAccelerated() : CGlUtils
• SetAcceptor() : CGnomon_param_Base::C_Param
• SetAcceptor_before_exon() : CSpliced_exon_Base
• SetAccession() : CExpectedError, CwxDemoTableCtrlFrame, CwxDemoFeatureTableFrame, CwxDemoAlignTableFrame, CValidErrItem_Base, CTextseq_id_Base, CTextannot_id_Base, CMSPepHit_Base, CINSDInterval_Base, CGBInterval_Base, CGene_commentary_Base, CPrimarySequence_Base::C_Attlist, CComponent_Base::C_Attlist, CGlobal_id_Base, CHit_Base, CCdCore, CSoftwareParam_Base::C_Attlist, CMzML_Base::C_Attlist, CCvParam_Base::C_Attlist
• SetAccession_version() : CINSDSeq_Base, CGBSeq_Base
• SetAccessionNumber() : CMzData_Base::C_Attlist
• SetAccessions() : CCdd_Viewer_Base
• SetAccessionValidator() : CObjectListWidgetSel
• SetAccessKey() : CHTMLNode
• SetAccver() : CTSeq_Base
• SetAcqNumber() : CAcquisition_Base::C_Attlist
• SetAcqSpecification() : CSpectrumSettings_Base
• SetAcquisition() : CAcquisitionList_Base, CAcquisition_Base, CAcqSpecification_Base
• SetAcquisitionList() : CSpectrumDescription_Base
• SetAcquisitionSettings() : CAcquisitionSettingsList_Base
• SetAcquisitionSettingsList() : CMzML_Base
• SetAction() : CPluginReply_Base, CDataHandleAction_Base, CDiagCollectGuard
• SetActionMode() : CSelectionVisitor
• SetActions() : CDataHandle_Base
• SetActivation() : CPrecursor_Base
• SetActive() : CCdd_org_ref_Base
• SetActive_finishing_bases() : CGC_Scaf_stats_Base::C_Composition
• SetActiveEnsemble() : AtomSet
• SetActiveTransaction() : CScope_Impl
• SetActivity() : CProt_ref_Base
• SetActivity_outcome_method() : CPC_AssayPanelMember_Base, CPC_AssayDescription_Base
• SetAdaptive() : CTrackContainer, CSGGenBankDS
• SetAdaptiveDepth() : SAnnotSelector
• SetAdaptiveDepthFlags() : SAnnotSelector
• SetAdaptiveMargins() : IPhyloTreeRenderer
• SetAdaptiveTrigger() : SAnnotSelector
• SetAdd_annot() : CSeqEdit_Cmd_Base
• SetAdd_desc() : CSeqEdit_Cmd_AddDesc_Base, CSeqEdit_Cmd_Base
• SetAdd_descr() : CSeqEdit_Cmd_AddDescr_Base, CSeqEdit_Cmd_Base
• SetAdd_id() : CSeqEdit_Cmd_AddId_Base, CSeqEdit_Cmd_Base
• SetAdd_to_MRU() : CPluginReplyAction_Base
• SetAdd_to_project() : CPluginReplyAction_Base
• SetAddElementFunctions() : CStlClassInfoFunctions_multiset< Container >, CStlClassInfoFunctions_set< Container >, CStlClassInfoFunctions< Container >, CContainerTypeInfo
• SetAdditional() : CInstrument_Base
• SetAdditionalDependencies() : CTool_Base::C_Attlist
• SetAdditionalIncludeDirectories() : CTool_Base::C_Attlist
• SetAdditionalLibraryDirectories() : CTool_Base::C_Attlist
• SetAdditionalOptions() : CTool_Base::C_Attlist
• SetAddPeriod() : CFlatStringQVal, CFormatQual
• SetAddress() : CContact_info_Base, CCvLookup_Base::C_Attlist
• SetAddthis() : CUpdate_comment_Base
• SetAdjustmentPolicy() : CGlPane
• SetAdjustToLimits() : CGlPane
• SetAdmin() : CDescription_Base
• SetAdvisor() : CWindowManager, CWindowManagerService, IWindowManagerService
• SetAdvParams() : CBLASTSearchParamsPanel
• SetAffil() : CAuthor_Base, CAuth_list_Base, CAffil_Base::C_Std
• SetAffinity() : CRPCClient< TRequest, TReply >, CPluginInfo_Base
• SetAffinityId() : CJob
• SetAffinityToken() : CJob
• SetAid() : CPC_XRefData_Base, CPC_StereoGroup_Base, CPC_Coordinates_Base, CPC_AtomString_Base, CPC_AtomSource_Base, CPC_Atoms_Base, CPC_AtomRadical_Base, CPC_AtomInt_Base, CPC_AssaySubmit_Base::C_Assay, CPC_AssayDescription_Base
• SetAid1() : CPC_DrawAnnotations_Base, CPC_Bonds_Base
• SetAid2() : CPC_DrawAnnotations_Base, CPC_Bonds_Base
• SetAid_source() : CPC_AssaySubmit_Base::C_Assay, CPC_AssayDescription_Base
• SetAidver() : CPC_AssaySubmit_Base::C_Assay
• SetAjdustRulerToSelection() : CSeqGraphicConfig
• SetAlgo_id() : CBlast_db_mask_info_Base
• SetAlgo_options() : CBlast_db_mask_info_Base
• SetAlgo_program() : CBlast_db_mask_info_Base
• SetAlgoCommand() : CPluginInfo
• SetAlgorithm() : CSequence_tree_Base
• SetAlgorithm_options() : CBlast4_get_request_info_reply_Base, CBlast4_queue_search_request_Base
• SetAlias() : CLDS_Database, CPluginIconInfo_Base
• SetAliases() : CMim_entry_Base, CMim_allelic_variant_Base, CHG_Gene_Base
• SetAlign() : CPad_Base::C_Attlist, CApad_Base::C_Attlist, CID2S_Seq_annot_Info_Base, CSeqEdit_Cmd_ReplaceAnnot_Base::C_Data, CSeqEdit_Cmd_RemoveAnnot_Base::C_Data, CSeqEdit_Cmd_AddAnnot_Base::C_Data, CSeqEdit_Cmd_AddAnnot_Base::C_Search_param::C_Obj, CSeq_annot_Base::C_Data, CAnnotdesc_Base, CHTMLNode
• SetAlign_group() : CPubdesc_Base
• SetAlign_id() : CClone_seq_Base
• SetAlign_len() : CHsp_Base
• SetAlign_res() : CAlign_stats_Base
• SetAlign_type() : CAlign_def_Base
• SetAlignannot() : CCdd_Base
• SetAligndata() : CChem_graph_alignment_Base
• SetAligned() : CPhrap_Seq
• SetAligner() : oligofar::CFilter, CSplign
• SetAlignerBase() : oligofar::TAlignerBase< CQuery, CSubject >
• SetAlignment() : CChem_graph_alignment_Base, CBiostruc_feature_Base::C_Location, CHG_Alignment_Base, CScoreCache
• setAlignment() : MultipleAlignment
• SetAlignments() : CBiostruc_align_Base, CBlast4_alignments_for_query_Base, CBlast4_get_search_results_reply_Base
• setAlignments() : BlockExtender
• SetAlignmentString() : oligofar::TAlignerBase< CQuery, CSubject >
• SetAlignOption() : CDisplaySeqalign
• SetAlignParam() : oligofar::CScoringFactory, CPassParam
• SetAligns() : CNum_ref_Base
• SetAlignseq() : CNcbi_mime_asn1_Base
• SetAlignstruc() : CNcbi_mime_asn1_Base
• SetAlignType() : CDisplaySeqalign
• SetAll() : CSurveyBrowser
• SetAll_alignments() : CBlast4_simple_results_Base
• SetAll_builds() : CRMRequest_Base, CRMReply_Base
• SetAll_scaf() : CGC_SequenceStats_Base
• SetAllele() : CGene_ref_Base, CFxnSet_Base::C_Attlist
• SetAllelicVariants() : CMim_entry_Base
• SetAllFlags() : CFastaOstream
• SetAllGap() : CAlnReader
• SetAllNamedAnnots() : SAnnotSelector
• SetAllNull() : CBDB_BufferManager
• SetAllocFillMode() : CObject
• SetAllowDeadEntries() : CID1Client
• SetAllowedRange() : FloatingPointTextCtrl, IntegerTextCtrl
• SetAllWindowTitles() : Messenger
• SetAlnMgr() : CAlignDataSource
• SetAlnModel() : CAlnSpanWidget
• SetAlnQuality() : CMapLoc_Base::C_Attlist
• SetAlnRange() : CAlnMap::CAlnChunk
• SetAlpha() : CImage, CCn3d_color_Base, CRgbaColor
• SetAlphabet() : CAlnReader
• SetAlphabetSize() : CSparseKmerCounts
• SetAlt() : CInt_fuzz_Base
• SetAlt_conf_ids() : CConformation_ensemble_Base
• SetAlternate_conf_ids() : CAtomic_coordinates_Base
• SetAltObjId() : CAgpExportParams
• SetAltSpliced() : CAutoDefFeatureClause_Base
• SetAltSpliceFlag() : CAutoDef
• SetAltValue() : CBDB_QueryNode
• SetAlwaysTranslateCDS() : CFlatFileConfig
• SetAmbient() : CGlMaterial, CGlLight
• SetAmbiguities() : oligofar::CPermutator8b::C_Entry
• SetAmbiguous() : CMim_reference_Base
• SetAmin() : CFastIScore, CProt_pos_Base
• SetAnalyzer() : CComponentList_Base::C_E_ComponentList::C_SAD, CAnalyzerList_Base
• SetAnalyzerList() : CInstrument_Base
• SetAncestors() : CCdd_Base
• SetAnchor() : CAlnMap, COther_source_Base, CSparseMultiDataSource, CAlnVecMultiDataSource, IAlnMultiDataSource
• SetAnchorId() : CAlnUserOptions
• SetAnchorRow() : CAnchoredAln
• SetAndSaveBlobState() : CReadDispatcher
• SetAndSaveBlobVersion() : CReader, CReadDispatcher
• SetAndSaveNoBlob() : CReader
• SetAndSaveSeq_idAccVer() : CReader
• SetAndSaveSeq_idBlob_ids() : CReader
• SetAndSaveSeq_idGi() : CReader
• SetAndSaveSeq_idLabel() : CReader
• SetAndSaveSeq_idSeq_ids() : CReader
• SetAndSaveStringGi() : CReader
• SetAndSaveStringSeq_ids() : CReader
• SetAngle() : CCamera_Base, IPhyGraphicsNode
• SetAnisotropic() : CAtomic_temperature_factors_Base
• SetAnnot() : CBioseq_set_Base, CSeqEdit_Cmd_AttachAnnot_Base, CBioseq_Base, CPC_ResultType_Base, CGraphTrack, CGeneModelTrack, CFeatureTrack, CEpigenomicsDS, CAnnotWriteConfig, CAlignmentTrack, CSeqUtils, CProjectItem_Base::C_Item, CProjectAnnot_Base, IGBProject, CGBWorkspace_Base, CGBProjectHandle, CGBProject_ver2_Base, CGBProject_ver2, CGBProject_Base, CGBProject, CFolderInfo_Base
• SetAnnot_info() : CID2_Reply_Get_Blob_Id_Base
• SetAnnot_type() : CPluginValueConstraint_Base
• SetAnnot_type_mask() : CID2_Get_Blob_Details_Base
• SetAnnotation() : CPC_DrawAnnotations_Base, CMSMZHit_Base, CSeqTree_node_Base
• SetAnnotations() : CCn3d_user_annotations_Base
• SetAnnotConfigSettings() : CAnnotWriteConfig
• SetAnnotDescrMap() : CCdAnnotationInfo
• SetAnnotLevel() : CTrackContainer
• SetAnnotObjectRange() : CAnnotMapping_Info
• SetAnnots() : CSeq_submit_Base::C_Data, CID2S_Chunk_Data_Base, CTrackProxy
• SetAnnotSelector() : CFlatFileGenerator, CFlatFileContext, CBioseqContext
• SetAnnotType() : SAnnotTypeSelector, SAnnotSelector
• SetAnnotupd() : CSP_block_Base
• SetAnnWedge() : IPhyGraphicsNode
• SetAnticodon() : CTrna_ext_Base
• SetAnyContent() : CSoapHeader_Base, CSoapEnvelope_Base, CSoapDetail_Base, CSoapBody_Base, CMemberId, CMemberInfo
• SetApad() : CToupper_Base::C_Data, CTolower_Base::C_Data, CSubs_Base::C_E_Subs, CStrip_Base::C_E_Strip, CRule_Base::C_Data, CPad_Base::C_E_Pad, CNormalize_Base::C_Data, CApad_Base, CApad_Base::C_E_Apad
• SetApp_date() : CCit_pat_Base
• SetApp_log() : CGBenchFeedbackRequest_Base
• SetApp_number() : CId_pat_Base::C_Id, CCit_pat_Base
• SetAppendStatement() : CSQLITE_Blob
• SetApplicable_user_types() : CPluginInfo_Base
• SetApplicants() : CCit_pat_Base
• SetApplication() : CHTMLBasicPage
• SetApplicationName() : I_DriverContext, impl::CDriverContext, IDataSource
• SetAppName() : CRemoteAppRequestSB_Impl, CDiagContext, CRemoteAppRequestSB
• SetAppPkg() : CPkgManager
• SetAppRunTimeout() : IRemoteAppRequest_Impl, CRemoteAppRequestSB, CRemoteAppRequestMB, IRemoteAppRequest
• SetAppState() : CRequestContext, CDiagContext
• SetArgs() : CPluginCommand_Base
• SetArgSep() : mu::ParserTokenReader, mu::ParserBase
• SetArgsType() : CArgDescriptions
• SetArgument() : CEUtils_Request
• SetArgumentDescriptions() : CMbIndexArgs, CHspFilteringArgs, CDebugArgs, CRemoteArgs, CMTArgs, CFormattingArgs, CBlastDatabaseArgs, CQueryOptionsArgs, CPhiBlastArgs, CPsiBlastArgs, CSearchStrategyArgs, CPssmEngineArgs, CGapTriggerArgs, CGeneticCodeArgs, CFrameShiftArgs, CLargestIntronSizeArgs, CGappedArgs, CCompositionBasedStatsArgs, CDiscontiguousMegablastArgs, CNuclArgs, CFilteringArgs, CGenericSearchArgs, CMatrixNameArg, CWordThresholdArg, COffDiagonalRangeArg, CWindowSizeArg, CTaskCmdLineArgs, CProgramDescriptionArgs, CStdCmdLineArgs, IBlastCmdLineArgs
• SetArray() : CPluginArg_Base::C_Data
• SetArrayLength() : CBinaryDataArray_Base::C_Attlist
• SetArrayName() : CSupDataArrayBinary_Base, CSupDataArray_Base
• SetArticle() : CPub_set_Base, CPub_Base
• SetAscending() : CNum_cont_Base
• SetAsn1() : CPrintFormat_Base
• SetAsnFrom() : CMapLoc_Base::C_Attlist
• SetAsnTo() : CMapLoc_Base::C_Attlist
• SetAsnType() : CAsnExportParams
• SetAspectRatio() : CGlCamera
• SetAssay() : CPC_AssaySubmit_Base, CExchangeSet_Base
• SetAssay_group() : CPC_AssayDescription_Base
• SetAssemblerListingLocation() : CTool_Base::C_Attlist
• SetAssembly() : CID2S_Chunk_Data_Base, CSeq_hist_Base, CGC_GenomicPart_Base, CRs_Base
• SetAssembly_type() : CBiomol_descr_Base
• SetAssembly_units() : CGC_Assembly_Base
• SetAssemblySource() : CAssembly_Base::C_Attlist
• SetAssertEvidence() : CAgpExportParams
• SetAssignees() : CCit_pat_Base
• SetAsurl() : CPC_XRefData_Base
• SetAt() : CNWAligner::CBacktraceMatrix4
• SetATIntronCost() : CProSplignScoring
• SetATLMinimizesCRunTimeLibraryUsage() : CConfiguration_Base::C_Attlist
• SetAtom_chiral() : CPC_Count_Base
• SetAtom_chiral_def() : CPC_Count_Base
• SetAtom_chiral_undef() : CPC_Count_Base
• SetAtom_id() : CPC_MMDBSource_Base, CAtom_pntr_Base
• SetAtom_id_1() : CIntra_residue_bond_Base, CInter_residue_bond_Base
• SetAtom_id_2() : CIntra_residue_bond_Base, CInter_residue_bond_Base
• SetAtom_ids() : CAtom_pntrs_Base
• SetAtom_name() : CPC_MMDBSource_Base
• SetAtomic() : CCoordinates_Base
• SetAtomlabels() : CPC_Coordinates_Base
• SetAtoms() : CPC_Compound_Base, CChem_graph_pntrs_Base, CAtomic_coordinates_Base, CResidue_graph_Base
• SetAttach_annot() : CSeqEdit_Cmd_Base
• SetAttach_project() : CPluginReplyAction_Base
• SetAttach_seq() : CSeqEdit_Cmd_Base
• SetAttach_seqentry() : CSeqEdit_Cmd_Base
• SetAttach_set() : CSeqEdit_Cmd_Base
• SetAttachment() : CTextTableModel, CEvent
• SetAttachments() : CGBenchFeedbackRequest_Base
• SetAttenuation() : CGlLight
• SetAttlist() : CDataMember, CMemberId, CMemberInfo, CData_set_id_Base::C_Data_set_id_type, CData_set_id_type_Base, COperand_Base, CSubs_Base, CStrip_Base, CPad_Base, CObjectUrl_Base, CApad_Base, CItem_Base, CSs_Base, CRsStruct_Base, CRsLinkout_Base, CRs_Base, CRs_Base::C_E_MergeHistory, CRs_Base::C_Sequence, CRs_Base::C_Update, CRs_Base::C_Create, CRs_Base::C_Validation, CRs_Base::C_Het, CPrimarySequence_Base, CMapLoc_Base, CFxnSet_Base, CExchangeSet_Base, CExchangeSet_Base::C_Summary, CExchangeSet_Base::C_Query, CExchangeSet_Base::C_SourceDatabase, CComponent_Base, CBaseURL_Base, CAssembly_Base, CAssembly_Base::C_SnpStat, CAssay_Base, CAssay_Base::C_Taxonomy, CAssay_Base::C_Method::C_EMethod, CVisualStudioProject_Base, CTool_Base, CPlatform_Base, CFilter_Base, CFileConfiguration_Base, CFFile_Base, CConfiguration_Base, CUserParam_Base, CTargetList_Base, CSpectrumList_Base, CSpectrum_Base, CSourceFileRefList_Base, CSourceFileRef_Base, CSourceFileList_Base, CSourceFile_Base, CSource_Base, CSoftwareRef_Base, CSoftwareParam_Base, CSoftwareList_Base, CSoftware_Base, CSelectedIonList_Base, CScanWindowList_Base, CScan_Base, CSampleList_Base, CSample_Base, CRun_Base, CReferenceableParamGroupRef_Base, CReferenceableParamGroupList_Base, CReferenceableParamGroup_Base, CProcessingMethod_Base, CPrecursorList_Base, CPrecursor_Base, CMzML_Base, CInstrumentConfigurationList_Base, CInstrumentConfiguration_Base, CDetector_Base, CDataProcessingList_Base, CDataProcessing_Base, CCvParam_Base, CCvList_Base, CCv_Base, CComponentList_Base, CChromatogramList_Base, CChromatogram_Base, CBinaryDataArrayList_Base, CBinaryDataArray_Base, CAnalyzer_Base, CAcquisitionSettingsList_Base, CAcquisitionSettings_Base, CAcquisitionList_Base, CAcquisition_Base, CUserParam_Base, CSupDesc_Base, CSupDataDesc_Base, CSupDataArrayBinary_Base, CSupDataArray_Base, CSpectrumList_Base, CSpectrumInstrument_Base, CSpectrum_Base, CSoftware_Base, CSampleDescription_Base, CPrecursorList_Base, CPrecursor_Base, CMzData_Base, CData_Base, CCvParam_Base, CCvLookup_Base, CAnalyzerList_Base, CAcquisition_Base, CAcqSpecification_Base
• SetAttr() : pythonpp::CObject
• SetAttrib() : CSubSource_Base, COrgName_Base, COrgMod_Base
• SetAttribute() : CProvider_Base, CObjectUrl_Base, CObjUrl_Base, CCgiSession_NetCache, CNCBINode, CHTMLPopupMenu, ICgiSessionStorage, CCgiSession
• SetAttributeGlobal() : CHTMLPopupMenu
• SetAttributeOptional() : CNCBINode
• SetAttribution() : CBiostruc_feature_set_descr_Base, CModel_descr_Base, CBiostruc_descr_Base, CBiomol_descr_Base, CMim_entry_Base, CCdd_descr_Base
• SetAuth() : CWorkerNode
• SetAuthor() : CMim_edit_item_Base, CMim_cit_Base
• SetAuthority() : CINSDTagsetRules_Base, CINSDTagset_Base, CGBTagsetRules_Base, CGBTagset_Base
• SetAuthors() : CMim_reference_Base, CINSDReference_Base, CGBReference_Base, CCit_sub_Base, CCit_pat_Base, CCit_gen_Base, CCit_book_Base, CCit_art_Base
• SetAuthString() : SNetScheduleAPIImpl::CNetScheduleServerListener
• SetAutoClearInParams() : CStatement, IStatement
• SetAutoHideTrack() : CSeqGraphicConfig
• SetAutoIncRequestIDOnPost() : CRequestContext
• SetAutoLabels() : CPhyloTreeScheme
• SetAutomassadjust() : CMSSearchSettings_Base
• SetAutoRange() : CRuler
• SetAutorun() : CPluginInfo_Base
• SetAutoSelBroadcast() : CBroadcastDialog
• SetAutoSeparator() : CObjectOStream
• SetAutoVRBroadcast() : CBroadcastDialog
• SetAutoWrite() : CDiagContext
• SetAveragemass() : CMSModSpec_Base, CMSMassSet_Base
• SetAvglen() : CCdd_repeat_Base
• SetAvgLength() : CQueryFactoryInfo, CMultiSeqInfo
• SetAxis() : CReal_graph_Base, CInt_graph_Base, CByte_graph_Base
• SetAxis_bottom() : CCylinder_Base, CCone_Base
• SetAxis_top() : CCylinder_Base, CCone_Base
• SetAxisMax() : CHistogramGlyph
• SetAxisMin() : CHistogramGlyph
• SetB() : CSeq_graph_Base, CSeq_bond_Base, CNum_real_Base, CColor_prop_Base, CIsotropic_temperature_factors_Base
• SetB_11() : CAnisotropic_temperature_factors_Base
• SetB_12() : CAnisotropic_temperature_factors_Base
• SetB_13() : CAnisotropic_temperature_factors_Base
• SetB_22() : CAnisotropic_temperature_factors_Base
• SetB_23() : CAnisotropic_temperature_factors_Base
• SetB_33() : CAnisotropic_temperature_factors_Base
• SetBackboneStyle() : StyleDialog
• SetBackColor() : CAlnMultiRenderer, CAlnMultiPane, CLegend, CGraphPanel
• SetBackground_color() : CCn3d_style_settings_Base
• SetBackgroundColor() : SequenceViewerWidget, SequenceViewerWidget_SequenceArea, SequenceViewerWidget_TitleArea, CwxTableListCtrl, CLayoutAlign
• SetBackgroundJob() : CSGDataSource
• SetBackgroundLoading() : CSeqGraphicConfig
• SetBackLimit() : COStreamBuffer
• SetBackupLocation() : CBDB_Volumes
• SetBackupSuffix() : CDirEntry
• SetBall_radius() : CCn3d_style_settings_Base
• SetBand() : CBandAligner
• SetBandwidths() : CFindOverlapParams
• SetBarcodeIndent() : CFlatItemFormatter
• SetBarColor() : CTranslationConfig
• SetBarHeight() : CTranslationConfig, CSeqGraphicConfig
• SetBase() : CObjectUrl_Base::C_Data::C_BaseData
• SetBaseCmd() : CStatement
• SetBaseData() : CObjectUrl_Base::C_Data
• SetBaseDir() : CTar
• SetBaseItems() : CAutoCompleteCombo
• SetBases() : CSplice_site_Base
• SetBases_in_spanned_gaps() : CGC_Scaf_stats_Base::C_Composition
• SetBases_in_unspanned_gaps() : CGC_Scaf_stats_Base::C_Composition
• SetBaseTitle() : COpenDlg
• SetBaseUrl() : IHelpHandler
• SetBaseURL() : CEUtils_Request, CExchangeSet_Base, CBaseURL_Base
• SetBaseWidth() : CAlnSeqId, IAlnSeqId
• SetBasicRuntimeChecks() : CTool_Base::C_Attlist
• SetBatch() : CAssay_Base::C_Attlist
• SetBatchId() : CSs_Base::C_Attlist, CAssay_Base::C_Attlist
• SetBatchSleep() : CBDB_Cache
• SetBatchType() : CAssay_Base::C_Attlist
• SetBegin() : CRangeMapIterator< Traits >, CHG_Domain_Base
• SetBegin_date() : CEntrez2_dt_filter_Base
• SetBeginningGap() : CAlnReader
• SetBelieveDeflines() : CBlastInputSourceConfig
• SetBelow() : CPC_StereoTrigonalBiPyramid_Base, CPC_StereoTetrahedral_Base
• SetBEParams() : CBMARefinerTrial, CBMARefinerEngine
• SetBestHitOverhang() : CBlastOptionsLocal, CBlastOptions
• SetBestHitScoreEdge() : CBlastOptionsLocal, CBlastOptions
• SetBestQueryScore() : oligofar::TAlignerBase< CQuery, CSubject >
• SetBgColor() : CHTMLNode, CBoundaryParams
• SetBGCommentColor() : CSeqGraphicConfig
• SetBig_integer() : CBlast4_value_Base
• SetBig_integer_list() : CBlast4_value_Base
• SetBinary() : CPC_InfoData_Base::C_Value, CBinaryDataArray_Base
• SetBinaryDataArray() : CBinaryDataArrayList_Base
• SetBinaryDataArrayList() : CSpectrum_Base, CChromatogram_Base
• SetBinaryDataFormat() : CObjectOStreamJson
• SetBinomial() : COrgName_Base::C_Name
• SetBinomialName() : COrgRefCache
• SetBiomol() : CMolInfo_Base
• SetBioObjectId() : CTSE_Info_Object
• SetBioseq() : CCachedSeqDataForRemote, CwxAnnotConfigDlg, CBlast4_value_Base
• SetBioseq_id() : CSeqEdit_Id_Base
• SetBioseq_list() : CBlast4_value_Base
• SetBioseq_place() : CID2S_Chunk_Content_Base
• SetBioseq_set() : CID2S_Chunk_Data_Base::C_Id, CID2S_Bioseq_place_Info_Base, CBlast4_value_Base, CBlast4_queries_Base
• SetBioseq_sets() : CID2S_Seq_descr_Info_Base, CID2S_Seq_annot_place_Info_Base
• SetBioseqHandle() : CAlnSeqId, CHitMatrixSeqGraph
• SetBioseqs() : CID2S_Seq_descr_Info_Base, CID2S_Seq_assembly_Info_Base, CID2S_Seq_annot_place_Info_Base, CID2S_Chunk_Data_Base, CID2S_Bioseqs_Info_Base, CMSResponse_Base
• SetBioseqs_info() : CID2S_Split_Info_Base
• SetBioseqset_id() : CSeqEdit_Id_Base
• SetBioseqSetClass() : CUnsupportedEditSaver, CEditsSaver, IEditSaver
• SetBioseqSetColl() : CUnsupportedEditSaver, CEditsSaver, IEditSaver
• SetBioseqSetDate() : CUnsupportedEditSaver, CEditsSaver, IEditSaver
• SetBioseqSetId() : CUnsupportedEditSaver, CEditsSaver, IEditSaver
• SetBioseqSetLevel() : CUnsupportedEditSaver, CEditsSaver, IEditSaver
• SetBioseqSetRelease() : CUnsupportedEditSaver, CEditsSaver, IEditSaver
• SetBiosrc() : CSeqFeatData_Base
• SetBiostruc() : CResidue_graph_pntr_Base
• SetBiostruc_id() : COther_feature_Base, CReference_frame_Base, CBiostruc_graph_pntr_Base
• SetBiostruc_ids() : CRegion_similarity_Base, CChem_graph_alignment_Base
• SetBiostruc_residue_graph_set_id() : CBiostruc_residue_graph_set_pntr_Base
• SetBiostrucs() : CBiostruc_set_Base
• SetBiosystem() : CPC_XRefData_Base
• SetBioTree() : CPhyLoadParams
• SetBiotree() : CPhyTreeView
• SetBioTreeFeatureList() : CPhyTreeNode
• SetBipyramid() : CPC_StereoCenter_Base
• SetBit() : CSeqDB_BitSet, oligofar::CBitmaskBuilder, CSeqDBBitVector, CSeqTable_single_data_Base, CSeqTable_multi_data_Base
• SetBit_score() : CHsp_Base, CBlast4_simple_alignment_Base
• SetBit_set() : CSeqTable_sparse_index_Base
• SetBitField() : CRs_Base::C_Attlist
• SetBitlist() : CPC_InfoData_Base::C_Value
• SetBits() : CGC_Assembly_Base
• SetBkColor() : CSeqGraphicConfig
• setBlank() : CSeqMaskerOstat
• SetBlast() : CSplignSimple
• SetBlast_mlogp() : CAlign_stats_Base
• SetBlast_name() : CTaxon2_data_Base
• SetBlast_name_lineage() : CT3Data_Base
• SetBlast_score() : CAlign_stats_Base
• SetBlastDatabaseArgs() : CBlastAppArgs
• SetBlastNameColorMap() : CGuideTree
• SetBlastParams() : CFindOverlapParams
• SetBlastpEvalue() : CMultiAlignerOptions
• SetBlastType() : CShowBlastDefline, CDisplaySeqalign
• SetBlob() : CID1SeqEntry_info_Base
• SetBlob_id() : CID2S_Request_Get_Chunks_Base, CID2S_Reply_Get_Split_Info_Base, CID2S_Reply_Get_Chunk_Base, CID2_Request_ReGet_Blob_Base, CID2_Request_Get_Blob_Info_Base, CID2_Request_Get_Blob_Info_Base::C_Blob_id, CID2_Reply_ReGet_Blob_Base, CID2_Reply_Get_Blob_Seq_ids_Base, CID2_Reply_Get_Blob_Id_Base, CID2_Reply_Get_Blob_Base
• SetBlob_info() : CID1SeqEntry_info_Base
• SetBlob_state() : CID2_Reply_Get_Blob_Id_Base, CID1blob_info_Base
• SetBlobCache() : CCacheHolder
• SetBlobData() : CWriteDB_Impl, CWriteDB
• SetBlobDeadTime() : CNCDBMetaFile, CNCDBFile
• SetBlobDumpFile() : CBDB_FileDumper
• SetBlobFormat() : CBDB_FileDumper
• SetBlobMap() : CBDB_BlobMetaContainer
• SetBlobOwner() : CNCBlobLockHolder
• SetBlobState() : CLoadLockBlob, CTSE_Info
• SetBlobTTL() : CNCBlobLockHolder
• SetBlobVersion() : CReaderRequestResult, CLoadLockBlob, CTSE_Info
• SetBlock() : CPrintForm_Base
• setBlockExtender() : DMAlignedOptimalScore
• SetBlockMultipleAlignment() : AlignmentUtility
• SetBlocks() : CCoreDef_Base
• SetBlocksToRealign() : MSAAInterface, BMARefinerInterface
• SetBlue() : CImage, CCn3d_color_Base, CRgbaColor
• SetBoaNodes() : CPhyloTreeScheme
• SetBody() : CSoapEnvelope_Base, CBlast4_request_Base, CBlast4_reply_Base
• SetBond() : CSeq_loc_Base, CSeqFeatData_Base
• SetBond_chiral() : CPC_Count_Base
• SetBond_chiral_def() : CPC_Count_Base
• SetBond_chiral_undef() : CPC_Count_Base
• SetBond_order() : CIntra_residue_bond_Base, CInter_residue_bond_Base
• SetBonds() : CPC_Compound_Base, CResidue_graph_Base
• SetBook() : CPub_set_Base, CPub_Base, CCit_proc_Base, CCit_art_Base::C_From
• SetBook_ref() : CFeature_evidence_Base, CCdd_descr_Base
• SetBookname() : CCdd_book_ref_Base
• SetBookTitle() : CMim_reference_Base
• SetBool() : CT3StatusFlags_Base::C_Value, CSeq_hist_Base::C_Deleted, CUser_field_Base::C_Data
• SetBoolean() : CPrintForm_Base, CBlast4_value_Base, CPluginValue_Base, CPluginValue, CPluginArg, CSupDataArray_Base::C_FDIBSTU
• SetBoolean_list() : CBlast4_value_Base
• SetBorderColor() : CLegend
• SetBottom() : CPC_StereoTShape_Base, CPC_StereoTrigonalBiPyramid_Base, CPC_StereoTetrahedral_Base, CPC_StereoPentagonalBiPyramid_Base, CPC_StereoOctahedral_Base, CGlRect< T >
• SetBottomPlane() : CGlCamera
• SetBoundary() : CRegion_pntrs_Base::C_Region
• SetBounds() : CSeq_align_Base
• SetBox() : CAlignShadow
• SetBranch_len() : CHG_Node_Base
• SetBrick() : CRegion_boundary_Base, CSurface_coordinates_Base::C_Surface
• SetBrief() : CProvider_Base
• SetBroadcast() : CDatagramSocket
• SetBroadcastBetweenProjects() : CBroadcastDialog
• SetBroadcastFlag() : CBroadcastVRChangeDialog
• SetBrowseInformation() : CTool_Base::C_Attlist
• SetBrowseInformationFile() : CTool_Base::C_Attlist
• SetBsannot() : CFeature_evidence_Base
• SetBtreeMinKeysPerPage() : CBDB_RawFile
• setbuf() : CCompressionStreambuf, CIndentingStreambuf, CByteStreamBuf, CPushback_Streambuf, CConn_Streambuf, CRWStreambuf
• SetBuffer() : CQueryEval_BV_Value< BV >, CGlOsContext, CBDB_Field
• SetBufferIdx() : CBDB_Field
• SetBufferManager() : CBDB_Field
• SetBufferSecurityCheck() : CTool_Base::C_Attlist
• SetBufferSize() : CDBLibContext, CBDB_Field
• SetBufPtr() : CQueryParserEnv, CBDB_QueryParserEnvironment
• SetBuild() : CRs_Base::C_Update::C_Attlist, CRs_Base::C_Create::C_Attlist
• SetBuild_date() : CEntrez2_info_Base, CGBenchVersionInfo_Base
• SetBuildCommandLine() : CTool_Base::C_Attlist
• SetBuilder() : CCrossAlnDemoDlg
• SetBuildId() : CSs_Base::C_Attlist, CRs_Base::C_E_MergeHistory::C_Attlist
• SetBuildLogFile() : CConfiguration_Base::C_Attlist
• SetBundle() : CBiostruc_seqs_aligns_cdd_Base::C_Seq_align_data
• SetBusy() : CCompressionProcessor
• SetButtonStates() : AnnotateDialog
• SetBV() : CQueryEval_BV_Value< BV >
• SetBval() : CPC_InfoData_Base::C_Value, CPC_AssayData_Base::C_Value
• SetBvec() : CPC_InfoData_Base::C_Value
• SetBy2Hit2Allele() : CRs_Base::C_Validation::C_Attlist
• SetByCluster() : CRs_Base::C_Validation::C_Attlist
• SetByDefault() : CBroadcastVRChangeDialog
• SetByFeaturePolicy() : SSeqMapSelector
• SetByFrequency() : CRs_Base::C_Validation::C_Attlist
• SetByHapMap() : CRs_Base::C_Validation::C_Attlist
• SetByOtherPop() : CRs_Base::C_Validation::C_Attlist
• SetByProduct() : SAnnotSelector
• SetByRow() : CPssm_Base
• SetByte() : CSeq_graph_Base::C_Graph
• SetBytes() : CSeqTableSetAnyFeatField, CSeqTableSetAnyLocField, CSeqTableSetExt, CSeqTableSetFeatField, CSeqTable_single_data_Base, CSeqTable_multi_data_Base, CCommonBytes_table_Base
• SetBytes2Go() : impl::CSendDataCmd
• SetBytesRd() : CRequestContext
• SetByteSwapped() : CBDB_BufferManager
• SetBytesWr() : CRequestContext
• SetC() : CChiral_center_Base
• SetCache() : CNCMMDBPage
• SetCached() : CReaderRequestResult
• SetCachePriority() : CBDB_BlobSplitStore< TBV, TObjDeMux, TL >, CBDB_RawFile
• SetCacheSize() : CLDS_IStreamCache, CSQLITE_Connection, CBDB_RawFile, CBDB_Env
• SetCafService() : CCgiApplication
• SetCalccharge() : CMSChargeHandle_Base
• SetCalcplusone() : CMSChargeHandle_Base
• SetCallingConvention() : CTool_Base::C_Attlist
• SetCamera() : CBiostruc_feature_Base::C_Property
• SetCamera_angle_rad() : CCn3d_view_settings_Base
• SetCamera_clip_far() : CCn3d_view_settings_Base
• SetCamera_clip_near() : CCn3d_view_settings_Base
• SetCamera_distance() : CCn3d_view_settings_Base
• SetCamera_look_at_X() : CCn3d_view_settings_Base
• SetCamera_look_at_Y() : CCn3d_view_settings_Base
• SetCamera_move() : CBiostruc_script_step_Base
• SetCanBlocksShrink() : BlockBoundaryAlgorithm
• SetCannonical_form() : CEntrez2_hier_node_Base
• SetCapacity() : CCache< TKey, TValue, THandler, TLock, TSize >
• SetCapacityLimit() : CResourcePool_Base< Value, Lock, CF >
• SetCaption() : CHG_Node_Base, CHG_Entry_Base, CHG_Commentary_Base
• SetCaretPos() : CTextItemPanel
• SetCase() : CQueryParserEnv, PNocase_Conditional_Generic< T >, CCgiArgs
• SetCaseFeature() : CSeqTextPaneConfig, CSeqTextConfig
• SetCategory() : CObjUrl_Base, CUser_object, CCdd_descr_Base, CViewTypeDescriptor
• SetCD() : CCdAnnotationInfo
• SetCdAccession() : CSequence_tree_Base
• SetCDBResultPtr() : CODBC_CursorResult
• SetCdcolor() : CCdd_Project_Base
• SetCdd() : CBiostruc_seqs_aligns_cdd_Base::C_Seq_align_data
• SetCdd_id() : CHG_Domain_Base
• SetCdd_name() : CHG_Domain_Base
• SetCDDDescription() : StructureSet, ASNDataManager
• SetCDDName() : StructureSet, ASNDataManager
• SetCDDNotes() : StructureSet, ASNDataManager
• SetCddPatterns() : CMultiAlignerOptions
• SetCddRid() : CShowBlastDefline, CDisplaySeqalign
• SetCde() : CTaxon1_name_Base
• SetCDMappedFrom() : CCdAnnotationInfo
• SetCDNASeqs() : CSplignParams
• SetCDNAStrand() : CSplignParams
• SetCdregion() : CSeqFeatData_Base
• SetCds() : CCdd_Project_Base
• SetCDS() : CSplicedAligner
• SetCdsConfig() : CCdsGlyph
• SetCdsInfo() : CGeneModel
• SetCelementid() : CCdd_book_ref_Base
• SetCellLimits() : CRegularGridGen
• SetCellNode() : CHTML_tc_Cache
• SetCellPadding() : CHTML_table
• SetCellSpacing() : CHTML_table
• SetCenter() : StructureSet, CPC_StereoTShape_Base, CPC_StereoTrigonalBiPyramid_Base, CPC_StereoTetrahedral_Base, CPC_StereoSquarePlanar_Base, CPC_StereoPentagonalBiPyramid_Base, CPC_StereoOctahedral_Base, CSphere_Base
• SetCentered() : CCommentGlyph
• SetCgiContext() : CShowBlastDefline, CDisplaySeqalign
• SetCgiMode() : CSeqGraphicRenderer, CFeaturePanel
• SetChain() : CPDB_seq_id_Base
• SetChange_seqattr() : CSeqEdit_Cmd_Base
• SetChange_setattr() : CSeqEdit_Cmd_Base
• SetChangeCalcTime() : CThreadPool_Controller_PID
• SetChanged() : CCleanupChange
• SetChangePredictTime() : CThreadPool_Controller_PID
• SetChannel() : CImage
• SetCharacterFont() : SequenceViewerWidget, SequenceViewerWidget_SequenceArea, SequenceViewerWidget_TitleArea
• SetCharacterSet() : CTool_Base::C_Attlist, CConfiguration_Base::C_Attlist
• SetCharAt() : TextRow
• SetCharge() : CMSSpectrumMatch, CMSBasicMatchedPeak, CPC_Compound_Base, CPC_Atoms_Base, CMSSpectrum_Base, CMSMZHit_Base, CMSHits_Base
• SetChargehandling() : CMSSearchSettings_Base
• SetCheck() : CTestCmdUI, CwxTreeCtrlEx, CGroupCheckboxes, CMenuItem, ICmdUI
• SetCheckMultiple() : CwxTreeCtrlEx
• SetCheckpoint() : CBDB_Cache
• SetCheckpointDelay() : CBDB_Cache
• SetCheckPointKB() : CBDB_Env
• SetCheckPointMin() : CBDB_Env
• SetCheckStrand() : CSeq_loc_Mapper_Base
• SetChemical_graph() : CBiostruc_Base
• SetChild_count() : CEntrez2_hier_node_Base
• SetChildObj() : CDBConnParams
• SetChildren() : CHG_Node_Base, CEntrez2_hier_node_Base, CSeqTree_node_Base, CSeqTree_node_Base::C_Children, CCdd_tree_Base, CCdd_Base, CLayoutGroup, CGlyphContainer, CRnaCdsGroup, CLayoutObject
• SetChildrenLayout() : CLayoutObject
• SetChildsDisplay() : IPhyGraphicsNode
• SetChildsNmb() : CPhyTreeNode
• SetChildsNmbEx() : CPhyTreeNode
• SetChiral_centers() : CResidue_graph_Base
• SetChoice() : CGroupRadioButtons
• SetChoiceNext() : CSequenceOfTypeInfo
• SetChoices() : CFormArgDesc
• SetChoiceVariant() : CObjectInfo
• SetChr() : CHG_Gene_Base
• SetChr_names() : CGC_Genome_Base
• SetChrom() : CWig2tableApplication
• SetChromatogram() : CChromatogramList_Base
• SetChromatogramList() : CRun_Base
• SetChromCount() : CAssembly_Base::C_SnpStat::C_Attlist
• SetChromosome() : CComponent_Base::C_Attlist
• SetChunk_id() : CID2S_Reply_Get_Chunk_Base
• SetChunkBounds() : CSplitQueryBlk
• SetChunkOverlapSize() : CSplitQueryBlk
• SetChunks() : CID2S_Split_Info_Base, CID2S_Request_Get_Chunks_Base
• SetChunkSize() : CNCStatTimer, SSplitterParams, CObjectMemoryPool
• SetCid() : CPC_XRefData_Base, CPC_CompoundType_Base::C_Id
• SetCit() : CSubmit_block_Base, CPatent_seq_id_Base, CSeq_feat_Base, CMedline_si_Base, CMedline_rn_Base, CMedline_entry_Base, CCit_let_Base, CCit_gen_Base
• SetCitation() : CAssay_Base
• SetCitationTitle() : CMim_reference_Base
• SetCitationType() : CMim_reference_Base
• SetCitlstpmids() : CMla_request_Base
• SetCitmatch() : CMla_request_Base, CMla_back_Base
• SetCitmatchpmid() : CMla_request_Base
• SetCity() : CAffil_Base::C_Std
• SetClass() : CBioseq_set_Info, CBioseq_set_EditHandle, CBioseq_set_Base, CRNA_gen_Base, CSeqEdit_Cmd_ChangeSetAttr_Base::C_Data, CSP_block_Base, CPDB_block_Base, CEMBL_block_Base, CUser_object_Base, CCit_pat_Base, CHTMLNode, CException, CNcbiDiag
• SetClass_name() : CPluginInfo_Base
• SetClassicalParentAccession() : CCdCore
• SetClassicalParentAccessionNew() : CCdCore
• SetClassMember() : CObjectInfo
• SetClassNamespace() : CClassTypeStrings
• SetCleanCommandLine() : CTool_Base::C_Attlist
• SetCleanupMode() : CWindowMaskerParams, CCleanupParams
• SetClient() : CSeqSearch
• SetClientCharset() : impl::CDriverContext, CTLibContext
• SetClientId() : CRemoteBlast
• SetClientID() : CVersionStruct_Base, CVersion_Base
• SetClientIP() : CJob, CRequestContext
• SetClientSID() : CJob
• SetClinicalSynopsis() : CMim_entry_Base
• SetClipRect() : CGlPane
• SetClone() : CSeqFeatData_Base
• SetClone_seq() : CClone_ref_Base
• SetClustal() : CAlnReader
• SetClusterIndex() : CAlignedFeatureGraph::SFeatRec
• SetClustering_Method() : CAlgorithm_type_Base
• SetClusteringThreshold() : CDistBasedClusterer
• SetClusters() : CBaseClusterer, CClusterer
• setCM() : CBlobStoreBase
• SetCmd() : CByteStreamBuf
• SetCmdID() : CUICommand
• SetCmdLine() : IRemoteAppRequest_Impl, CRemoteAppRequestSB, CRemoteAppRequestMB, IRemoteAppRequest
• SetCmp() : CBDB_IdFile, CBDB_File, CBDB_RawFile, CBDB_LobFile
• SetCode() : CCdregion_Base, CSeq_code_table_Base, CEMBL_dbname_Base, CMedlars_record_Base, CBlast4_error_Base
• SetCode_break() : CCdregion_Base
• SetCoden() : CTitle_Base::C_E
• SetCodes() : CSeq_code_set_Base
• SetCoding() : IBlastSeqVector, CBlastSeqVectorOM, CBlastSeqVectorFromCSeq_data, CSeqVector_CI, CSeqVector
• SetCoding_region() : CGnomon_param_Base::C_Param
• SetCodon() : CTrna_ext_Base
• SetCodonDrawChoice() : CSeqTextPaneConfig, CSeqTextConfig
• SetCodonState() : CTrans_table
• SetColl() : CBioseq_set_Info, CBioseq_set_EditHandle, CBioseq_set_Base, CSeqEdit_Cmd_ChangeSetAttr_Base::C_Data, CCit_book_Base
• SetCollectNames() : SAnnotSelector
• SetCollectSeq_annots() : SAnnotSelector
• SetCollectSeverity() : CDiagCollectGuard
• SetCollectTypes() : SAnnotSelector
• SetColor() : OpenGLRenderer, CBiostruc_feature_Base::C_Property, CHTMLNode, IWMClient, CGLTestWMClient, CTreeWMClient, CHTMLWMClient, CTextWMClient, CClockPanelWMClient, CTextSelHandler, CSeqTextConfig, CSGConfigUtils, CPhyloTreeScheme, CRuler, CLinearSelHandler, CColorTableMethod, CWidgetDisplayStyle, CGlBackground, CRegularGridRenderer, CGraphBase, CComboChart, CAxisRenderer, CTaskView, CEventView, CDiagConsoleView, CwxGLTestView, CSelectionView, CProjectViewBase, CProjectTreeView, CDataMiningView
• SetColor_scheme() : CCn3d_general_style_Base, CCn3d_backbone_style_Base
• SetColorForNoScore() : CMatrixScoringMethod, CColumnScoringMethod, CColorTableMethod, CTestSeqBasedMethod, CSNPScoringMethod, CSimpleScoringMethod, IScoringMethod, CQualityScoringMethod
• SetColorIndex() : CHitGlyph, CHitElemGlyph
• SetColoring_scope() : CAlgorithm_type_Base
• SetColoringMenuFlag() : StructureWindow
• SetColorScheme() : StyleSettings
• SetColorspace() : oligofar::CReaderFactory
• SetColorTheme() : CSeqGraphicConfig
• SetColSpan() : CHTML_tc
• SetColType() : CFilterSet
• SetColumn() : CSeqDBColumnFlush, CSeqTableLocColumns, CSorterByColumn, CFilter, CLayoutFeatLabel
• SetColumnAlign() : CwxTableListCtrl
• SetColumnFormatter() : CwxTableListCtrl
• SetColumnName() : CDB_ITDescriptor
• SetColumnNames() : CBDB_FileDumper
• SetColumnOrder() : CwxTableListCtrl
• SetColumnPos() : CAlnMultiRenderer
• SetColumns() : CSeq_table_Base, CMatrix_Base, CAlnMultiRenderer
• SetColumnsByStyle() : CAlnMultiRenderer
• SetColumnSeparator() : CBDB_FileDumper
• SetColumnsOrder() : CwxTableListCtrl
• SetColumnType() : CDB_ITDescriptor
• SetColumnUserData() : CAlnMultiRenderer
• SetColumnVisible() : CAlnMultiRenderer
• SetColumnWidth() : CHTML_table, CMapControl, CAlnMultiRenderer
• SetCombiningFileName() : CCodeGenerator
• SetCommand() : CELink_Request, CMapItem, CMenuItem, CPluginRequest_Base, CPluginRequest, CPluginInfo_Base, CPluginCommand_Base
• SetCommandLine() : CTool_Base::C_Attlist, CBlastAppArgs
• SetCommandMap() : CNetServProtoParser< Extra >, CNetServProtoParserBase
• SetCommands() : CCdd_Script_Base
• SetComment() : CSubmit_block_Base, CSeq_graph_Base, CSeqFeatData_Base, CSeq_feat_Base, CSeqdesc_Base, CPubdesc_Base, CAnnotdesc_Base, CProjdesc_Base, CPC_Substance_Base, CPC_Atoms_Base, CPC_AssayTargetInfo_Base, CPC_AssayResults_Base, CPC_AssayPanelMember_Base, CPC_AssayDescription_Base, CPC_AnnotatedXRef_Base, CINSDSeq_Base, CID1blob_info_Base, CGBSeq_Base, CGene_commentary_Base, CAssay_Base, CUpdate_comment_Base, CFeature_evidence_Base, CCdd_descr_Base, CProjectHistoryItem_Base, CProjectDescr_Base, CFolderInfo_Base, IRWRegistry, CCdCore, CSupDataDesc_Base::C_Attlist, CSampleDescription_Base::C_Attlist, CGeneModel
• setComment() : CSeqMaskerOstat
• SetCommentaries() : CHG_Entry_Base, CHG_CommentarySet_Base
• SetCommentBottomMargin() : CSeqGraphicConfig
• SetCommentFont() : CSeqGraphicConfig
• SetCommentRepeatDist() : CSeqGraphicConfig
• SetComments() : CEntrezgene_Base, CFeatureCreateDialog, CGBenchToolResults_Base, CSpectrumDesc_Base, CSoftware_Base
• SetCommentsIfEmpty() : DTDParser
• SetCommentTopMargin() : CSeqGraphicConfig
• SetCommNote() : CMim_reference_Base
• SetCommon() : COrg_ref_Base
• SetCommon_bytes() : CSeqTable_multi_data_Base
• SetCommon_string() : CSeqTable_multi_data_Base
• SetCommunicationTimeout() : CNetService, CNetScheduleAPI, CNetICacheClient, CNetCacheAPI
• SetComp() : CSeq_graph_Base
• SetComp_based_statistics() : CBlast4_common_options_Base
• SetCompact() : CHTML_dl, CHTMLListElement
• SetCompartmentPenalty() : CSplign
• SetCompileAs() : CTool_Base::C_Attlist
• SetComplemented() : CPhrap_Seq
• SetCompleted() : CNetBlastDMSearchFormPanel
• SetCompleteness() : CMolInfo_Base
• SetCompleteResponse() : CGridCgiContext
• SetCompletionTime() : CSoftware_Base::C_Attlist
• SetComplexity() : CEFetch_Sequence_Request
• SetCompoAdjustMode() : CSimpleB2SWrapper
• SetComponent() : CAssembly_Base
• SetComponent_count() : CGC_Scaf_stats_Base
• SetComponent_span_count() : CGC_Scaf_stats_Base
• SetComponentList() : CInstrumentConfiguration_Base, CComponentList_Base
• SetComponentRanges() : CSegmentGlyph, CLayoutSeqMap
• SetComponents() : CPrintFormBlock_Base
• SetComponentType() : CComponent_Base::C_Attlist
• SetComposition() : CGC_Scaf_stats_Base
• SetCompositionBasedStats() : CBlastOptionsLocal, CBlastOptions, CBlastAdvancedProteinOptionsHandle
• SetCompound() : CPDB_block_Base, CPC_Substance_Base
• SetCompPenalty() : CSplignParams
• SetCompressed() : CVariantInfo, CMemberId, CMemberInfo
• SetCompression() : CAnalysisFileLoader
• SetCompressor() : CBDB_RawFile, CBDB_ExtBlobStore< TBV >
• SetComps() : CSeq_code_table_Base
• SetComputedCharge() : CMSPeak
• SetConcentration() : CPC_ConcentrationAttr_Base
• SetConcordant() : CClone_ref_Base
• SetCondition() : CBDB_FileCursor
• SetCone() : CRegion_boundary_Base, CSurface_coordinates_Base::C_Surface
• SetConf_ensembles() : CAtomic_coordinates_Base
• SetConfGraphState() : CTraceGraph
• SetConfidence() : CClone_seq_Base, CTraceData
• SetConfidential() : CID1blob_info_Base
• SetConfig() : CwxSettingsDlg, CHistConfigDlg, CwxHairlineDlg, CExtraFeaturePanel, CContentCheckDialog, CSequenceTextGraph, CTranslationGlyph, CSeqGraphicPreview, CSegmentGlyph, CMatePairGlyph, CLayoutTrack, CLayoutGroup, CRnaCdsGroup, CFeatGlyph, CClonePlacementGlyph, CAlignSmearGlyph, CAlignGlyph, CLayoutHistogram
• SetConfigCache() : CPhyloTreeWidget
• SetConfigManager() : CHistogramGlyph
• SetConfigName() : CHistConfigDlg
• SetConfigObject() : CAnnotConfigUtils
• SetConfiguration() : CConfigurations_Base
• SetConfigurations() : CVisualStudioProject_Base
• SetConfigurationType() : CTool_Base::C_Attlist, CConfiguration_Base::C_Attlist
• SetConfirmedStartStopForCompleteProteins() : CChain
• SetConflict() : CCdregion_Base
• SetConformers() : CPC_Coordinates_Base
• SetConn() : CDB_ResultProcessor
• SetConnContext() : CEUtils_Request
• SetConnectionFactory() : CDbapiConnMgr
• SetConnections() : CCn3d_style_settings_Base
• SetConnectionTimeout() : CDBConnectionFactory
• SetConnMode() : CNetScheduleAPI, CNetCacheAPI
• SetConnType() : CServer_ConnectionPool
• SetConnValidator() : CDBDefaultConnParams, CDBConnParamsBase, impl::CDBConnParamsBase
• SetConservedCutoffScore() : CMultiAlignerOptions
• SetConsidermult() : CMSChargeHandle_Base
• SetConsortium() : CINSDReference_Base, CPerson_id_Base, CGBReference_Base
• SetConstIteratorFunctions() : CContainerTypeInfo
• SetConstraint() : CArgDescMandatory, CPluginCommand, CPluginArgSet, CPluginArg_Base, CArgDesc, CArgDescriptions
• SetConstraints() : CPssmParameters_Base, CPC_ResultType_Base, CFeatureCreateDialog
• SetConstructMethod() : CTreeBuilderParams
• SetCont() : CNumbering_Base
• SetContact() : CSubmit_block_Base, CContact_info_Base, CFileDescription_Base, CAdmin_Base
• SetContactInfo() : CContact_Base
• SetContainerMaxSize() : CBDB_ExtBlobStore< TBV >
• SetContent() : CPageHandler, CESearchResult_Base::C_Data::C_Info, CID2S_Chunk_Info_Base
• SetContentConf() : CSeqTextConfig
• SetContents() : CSurface_coordinates_Base, CDensity_coordinates_Base
• SetContentType() : CCgiResponse, CCgiEntry
• SetContext() : CQueryParserEnv, CFlatItemFormatter, CAlnMultiRenderer, CAlnMultiPane, CAlnMultiHeader, CPluginMessage_Base, CPluginCommand_Base
• SetContextFilter() : CTreeIteratorTmpl< LevelIterator >
• SetContextMenuEventPropagation() : CwxTableListCtrl
• SetContig() : CINSDSeq_Base, CGBSeq_Base
• setcontig() : setcontig
• SetContigLabel() : CComponent_Base::C_Attlist
• SetController() : CSearchFormBase, IDMSearchForm
• SetControls() : StyleDialog
• SetConv() : oligofar::CHashPopulator
• SetConversion() : CSeq_loc_Conversion
• SetConverter() : CGlDrawScale
• SetConvertionTable() : oligofar::CScoringFactory
• SetCookie() : CEntrez2_request_Base, CEntrez2_reply_Base
• SetCoordinate_indices() : CRegion_coordinates_Base
• SetCoordinate_units() : CModel_space_Base
• SetCoordinates() : CIdDeMux< TBV, TBVFact >, CModel_coordinate_set_Base
• SetCoordinatesFast() : CIdDeMux< TBV, TBVFact >
• SetCoordMapper() : CSGGenBankDS
• SetCoords() : CPC_Compound_Base
• SetCopyCDSFromCDNA() : CFlatFileConfig
• SetCopyFunction() : CTypeInfo, CVariantInfo, CMemberInfo
• SetCopyGeneToCDNA() : CFlatFileConfig
• SetCopyMissingFunction() : CMemberInfo
• SetCopyright() : CMim_entry_Base
• SetCore() : CGBProject_Base, CSupportInfo
• SetCore_genes() : CHG_Entry
• SetCoreCutoff() : CCompoundRWRegistry, CCompoundRegistry
• SetCorner_000() : CBrick_Base
• SetCorner_001() : CBrick_Base
• SetCorner_010() : CBrick_Base
• SetCorner_011() : CBrick_Base
• SetCorner_100() : CBrick_Base
• SetCorner_101() : CBrick_Base
• SetCorner_110() : CBrick_Base
• SetCorner_111() : CBrick_Base
• SetCorrectedQuery() : CESpellResult_Base
• SetCount() : CSageData, CESearchResult_Base::C_Data::C_Info, CDbInfo_Base, CID2S_Gi_Range_Base, CPC_Compound_Base, CEntrez2_term_Base, CEntrez2_docsum_list_Base, CEntrez2_boolean_reply_Base, CCdd_repeat_Base, CTargetList_Base::C_Attlist, CSpectrumList_Base::C_Attlist, CSourceFileRefList_Base::C_Attlist, CSourceFileList_Base::C_Attlist, CSoftwareList_Base::C_Attlist, CSelectedIonList_Base::C_Attlist, CScanWindowList_Base::C_Attlist, CSampleList_Base::C_Attlist, CReferenceableParamGroupList_Base::C_Attlist, CPrecursorList_Base::C_Attlist, CInstrumentConfigurationList_Base::C_Attlist, CDataProcessingList_Base::C_Attlist, CCvList_Base::C_Attlist, CComponentList_Base::C_Attlist, CChromatogramList_Base::C_Attlist, CBinaryDataArrayList_Base::C_Attlist, CAcquisitionSettingsList_Base::C_Attlist, CAcquisitionList_Base::C_Attlist, CSpectrumList_Base::C_Attlist, CPrecursorList_Base::C_Attlist, CAnalyzerList_Base::C_Attlist, CAcqSpecification_Base::C_Attlist
• SetCount_only() : CEntrez2_get_links_Base
• SetCounter() : CSeqIdGenerator, CPhyTreeNode, CGBProject_ver2_Base, CGBProject_Base
• SetCountFunctions() : CStlClassInfoFunctions_vec< Container >, CStlClassInfoFunctions< Container >, CContainerTypeInfo
• SetCountry() : CPatent_priority_Base, CId_pat_Base, CCit_pat_Base, CAffil_Base::C_Std
• SetCounts() : CBlastTabularInfo
• SetCovalent_unit() : CPC_Count_Base
• SetCoverage() : CGC_Assembly_Base
• SetCPPDir() : CCodeGenerator
• SetCprt() : CImprint_Base
• SetCr_date() : CHG_Entry_Base
• SetCrc32() : CViewDataLink_Base::C_Fingerprint
• SetCreate() : CRs_Base, CRs_Base::C_Create
• SetCreate_date() : CSeqdesc_Base, CAnnotdesc_Base, CINSDSeq_Base, CGBSeq_Base, CGene_track_Base, CGene_commentary_Base, CCdd_pref_node_descr_Base, CCdd_descr_Base, CProjectDescr_Base, CProjectAnnot_Base, CFolderInfo_Base
• SetCreate_project() : CPluginReplyAction_Base
• SetCreate_release() : CINSDSeq_Base, CGBSeq_Base
• SetCreate_single_project() : CPluginReplyAction_Base
• SetCreated() : CSP_block_Base, CProjectEditDlg
• SetCreated_by() : CBlast4_get_request_info_reply_Base
• SetCreateDate() : CSeq_annot, CProjectItem, CProjectDescr, IGBProject, CGBProjectHandle, CGBProject_ver2, CGBProject, CFolderInfo
• SetCreateFunction() : CTypeInfo, CAliasTypeInfo
• SetCreateGeneFeats() : CGffLoadParams
• SetCreateMode() : CwxMainFrame
• SetCreateTime() : CWorkspacePrx, CProjectPrx
• SetCreation_date() : CEMBL_block_Base
• SetCreationDate() : CMim_entry_Base
• SetCross_reference() : CPIR_block_Base
• SetCStyleBigInt() : CObjectOStreamAsnBinary
• SetCsubelementid() : CCdd_book_ref_Base
• SetCTermExt() : DistanceMatrix
• setCTermExt() : BlockExtender
• SetCTerminalExt() : CAlgorithm_type_Base
• SetCtgId() : CComponent_Base::C_Attlist
• SetCtrl() : CCdd_Viewer_Base
• SetCullingLimit() : CBlastOptionsLocal, CBlastOptionsHandle, CBlastOptions
• SetCulture() : CTool_Base::C_Attlist
• SetCuration_status() : CCdd_descr_Base
• SetCurrent() : CAssembly_Base::C_Attlist, CTime
• SetCurrent_id() : CGene_track_Base
• SetCurrent_node() : CHG_Node_Base
• SetCurrent_version() : CGBenchInitReply_Base
• SetCurrentCell() : CHTML_table
• SetCurrentContext() : CIdMapperConfig
• SetCurrentGroup() : CArgDescriptions
• SetCurrentItemNum() : CTL_RowResult
• SetCurrentMethod() : CAlnMultiModel
• SetCurrentNode() : CPhyloTreeDataSource
• SetCurrentSeq() : CFastaReader
• SetCurrentStringId() : CStringListCtrl
• SetCurrentStyle() : CThemeConfigPanelBase, IThemeConfigPanelBase
• SetCurrentStyleByDesc() : CThemeConfigPanelBase
• SetCurrentStyleKey() : CSettingsSet
• SetCurrentStyleName() : CSettingsSet
• SetCurrentValue() : oligofar::IProgressIndicator, oligofar::CProgressIndicator
• SetCurrRenderer() : CPhyloTreeWidget
• SetCurrRendererIdx() : CPhyloTreePane
• SetCurrTheme() : CSeqGraphicConfig
• SetCursor() : CFltkUtils
• SetCursorDeclared() : impl::CBaseCmd
• SetCursorName() : CODBC_LangCmd
• SetCursorOpen() : impl::CBaseCmd
• SetCustomMallocFuncs() : CSQLITE_Global
• SetCustomPageCache() : CSQLITE_Global
• SetCuthi() : CMSSearchSettings_Base
• SetCutinc() : CMSSearchSettings_Base
• SetCutlo() : CMSSearchSettings_Base
• SetCutoff() : CMSSearchSettings_Base, CBlast4_value_Base, CGlLight
• SetCutoff_list() : CBlast4_value_Base
• SetCutoffScore() : CBlastOptionsLocal, CBlastOptionsHandle, CBlastOptions
• SetCv() : CCvList_Base, CCv_Base
• SetCvLabel() : CCvParam_Base::C_Attlist, CCvLookup_Base::C_Attlist
• SetCvList() : CMzML_Base
• SetCvLookup() : CMzData_Base, CCvLookup_Base
• SetCvParam() : CTarget_Base, CSpectrumDescription_Base, CSpectrum_Base, CSourceFile_Base, CSource_Base, CSelectedIon_Base, CScanWindow_Base, CScan_Base, CSample_Base, CRun_Base, CReferenceableParamGroup_Base, CProcessingMethod_Base, CIsolationWindow_Base, CInstrumentConfiguration_Base, CFileContent_Base, CDetector_Base, CCvParam_Base, CContact_Base, CChromatogram_Base, CBinaryDataArray_Base, CAnalyzer_Base, CActivation_Base, CAcquisitionSettings_Base, CAcquisitionList_Base, CAcquisition_Base, CSupDataDesc_Base::C_E_SupDataDesc, CSpectrumInstrument_Base::C_E_SpectrumInstrument, CSource_Base::C_E, CSampleDescription_Base::C_E_SampleDescription, CProcessingMethod_Base::C_E, CIonSelection_Base::C_E, CDetector_Base::C_E, CCvParam_Base, CAnalyzer_Base::C_E, CAdditional_Base::C_E, CActivation_Base::C_E, CAcquisition_Base::C_E_Acquisition
• SetCvRef() : CSoftwareParam_Base::C_Attlist, CCvParam_Base::C_Attlist
• SetCwd() : CDir
• SetCylinder() : CRegion_boundary_Base, CSurface_coordinates_Base::C_Surface
• SetD() : CSupDataArrayBinary_Base
• SetDarkColor() : CGlBackground
• setData() : AlignedDM
• SetData() : DTDEntity, CwxCSVExportDlg, CGwasTrackParamsPanel, CWigParamsPanel, CResolveIdDlg, CGffParamsPanel, CGffExportPage, CFlatFileExportPage, CFASTAFormatParamsPanel, CFastaExportPage, CBedParamsPanel, CAgpLoadPage, CAgpExportPage, CPhyLoadPage, CPhyExportPage, CAsnExportPage, oligofar::CHashPopulator, CImage, CAutoPtrTypeInfo< Data >, CConstRefTypeInfo< Data >, CRefTypeInfo< Data >, CStlClassInfo_auto_ptr< Data >, CDelayBuffer, CObjectUrl_Base, CESearchResult_Base, CLinkSetDb_Base, CLinkSet_Base, CIdUrlSet_Base, CT3Reply_Base, CSeq_submit_Base, CSeqTable_column_Base, CID2S_Sequence_Piece_Base, CID2S_Chunk_Base, CSeqFeatXref_Base, CSeq_feat_Base, CSeqEdit_Cmd_ReplaceAnnot_Base, CSeqEdit_Cmd_RemoveAnnot_Base, CSeqEdit_Cmd_ChangeSetAttr_Base, CSeqEdit_Cmd_ChangeSeqAttr_Base, CSeqEdit_Cmd_AddAnnot_Base, CSeq_annot_Base, CProject_Base, CPC_Coordinates_Base, CPC_Conformer_Base, CPC_AssaySubmit_Base, CPC_AssayResults_Base, CEntrez_general_Base, CMedlars_record_Base, CID2S_Reply_Get_Split_Info_Base, CID2S_Reply_Get_Chunk_Base, CID2_Reply_ReGet_Blob_Base, CID2_Reply_Get_Blob_Base, CID2_Reply_Data_Base, CUser_object_Base, CUser_field_Base, CEntrez2_link_set_Base, CBlast4_seq_part_data_Base, CTextItemPanel, CSnpTableData, CEventAttachmentFor< T >, CLDFilterDialog, CWindowMaskerPanel, CCleanupPanel, CTreeBuilderPanel, CSplignPanel, CFindOverlapPanel, CFilter, CBookmark, CViewDescriptor_Base, CPluginArg_Base, IGBProject, CGBProjectHandle, CGBProject_ver2_Base, CGBProject_ver2, CGBProject, CGBenchFeedbackAttachment_Base, CAbstractProjectItem_Base, CBroadcastDialog, CExplorerItemEx< TData >, CAppExplorerDataObject, CVariant, DistanceMatrix, CSupDataArrayBinary_Base::C_D, CMzArrayBinary_Base, CIntenArrayBinary_Base, CData_Base
• SetData_compression() : CID2_Reply_Data_Base
• SetData_format() : CID2_Reply_Data_Base
• SetData_plugin() : CProjectItem_Base, CGBProject_ver2_Base, CGBProject_Base
• SetData_set_id_name() : CData_set_id_Base
• SetData_set_id_num() : CData_set_id_Base
• SetData_set_id_type() : CData_set_id_Base, CData_set_id_Base::C_Data_set_id_type, CData_set_id_type_Base, CData_set_id_Base
• SetData_set_id_uids() : CData_set_id_Base
• SetData_set_id_uids_E() : CData_set_id_Base::C_Data_set_id_uids::C_E_EData_set_id_uids, CData_set_id_uids_Base
• SetData_set_id_version() : CData_set_id_Base
• SetData_set_id_weight() : CData_set_id_Base
• SetData_size() : CEntrez2_link_set_Base, CEntrez2_link_info_Base
• SetData_source() : CBiostruc_history_Base
• SetData_type() : CID2_Reply_Data_Base
• SetDatabase() : CConnection, CSubObjectSelector_Base, CObjectSelector_Base, CESpellResult_Base, CEUtils_Request, CLDS_DataLoader, CGlobal_id_Base, CBlast4_get_seq_parts_request_Base, CBlast4_get_request_info_reply_Base, CBlast4_subject_Base, CBlast4_get_sequences_request_Base, CBlast4_database_info_Base, CBLASTSearchOptionsPanel, IConnection, CRemoteBlast
• SetDatabase_entry_date() : CBiostruc_source_Base
• SetDatabase_entry_history() : CBiostruc_source_Base
• SetDatabase_entry_id() : CBiostruc_source_Base
• SetDatabase_name() : CBlast4_queue_search_request_lite_Base
• SetDatabase_reference() : CINSDSeq_Base, CGBSeq_Base
• SetDatabaseMaskingSupport() : CBlastDatabaseArgs
• SetDatabaseName() : CDB_Connection, impl::CConnection, CDBDefaultConnParams, CDBConnParamsBase, impl::CDBConnParamsBase, CSearchDatabase
• SetDatabaseNameEnv() : CDBEnvConnParams
• SetDatabaseParameter() : CDbapiSampleApp
• SetDatabaseParameters() : CTestArguments
• SetDataChanged() : StructureSet, ASNDataManager
• SetDataCommand() : CPluginInfo
• SetDataHandle() : CPluginValue_Base, CPluginValue, CPluginObject
• SetDataId() : CStlOneArgTemplate
• SetDataLoaderConfig() : CBlastInputSourceConfig
• SetDataLogging() : CSocketAPI, CSocket
• SetDataMember() : CDataType
• SetDataObject() : CFolderEditDlg
• SetDataOffset() : CAliasTypeInfo
• SetDataPointer() : CAliasTypeInfo
• SetDataProcessing() : CDataProcessingList_Base, CDescription_Base
• SetDataProcessingList() : CMzML_Base
• SetDataProcessingRef() : CSpectrum_Base::C_Attlist, CChromatogram_Base::C_Attlist, CBinaryDataArray_Base::C_Attlist
• SetDataRowsSelected() : CwxTableListCtrl
• SetDataSize() : CBDB_Field
• SetDataSource() : CCrossAlnRenderer, CCrossAlnPane, SAnnotSelector, CTaxTreeBrowser, CSequenceTickGraph, CSeqTextWidget, CSequenceTextGraph, CSeqGraphicPreview, CFastaTextDisplay, CPhyloTreeWidget, CHitMatrixWidget, CHistogramGraph, CFeatTableWidget, CAnnotCompareWidget, CAlnTableWidget, CAlnMultiWidget, CAlnMultiModel, CCrossPanelIR, CCrossAlnWidget, CSnpTableWidget, CScatterGraph, CPieGraph, CLegend, CGraphBase, IGraph, CComboChart
• SetDatatype() : CPC_Urn_Base
• SetDataUnchanged() : ASNDataManager
• SetDate() : CNCBI_Sample_ASN_Type_Base, CBioseq_set_Info, CBioseq_set_EditHandle, CSeq_test_result_Base, CBioseq_set_Base, CSeqEdit_Cmd_ChangeSetAttr_Base::C_Data, CPIR_block_Base, CPDB_replace_Base, CGB_block_Base, CSeq_hist_rec_Base, CSeq_hist_Base::C_Deleted, CProjdesc_Base, CPC_InfoData_Base::C_Value, CPC_DBTracking_Base, CPC_AssayResults_Base, CBiostruc_replace_Base, CRs_Base::C_Update::C_Attlist, CRs_Base::C_Create::C_Attlist, CExchangeSet_Base::C_Query::C_Attlist, CPubStatusDate_Base, CPatent_priority_Base, CMeeting_Base, CImprint_Base, CCit_sub_Base, CCit_gen_Base, CProjectHistoryItem_Base, CGBenchFeedbackRequest_Base
• SetDate_issue() : CCit_pat_Base
• SetDateRange() : CBDB_Volumes
• SetDateType() : CESearch_Request, CELink_Request
• SetDay() : CMim_date_Base, CDate_std_Base, CTime
• SetDb() : CWrapperUpper, CGiimport_id_Base, CRsite_ref_Base, CProt_ref_Base, COrg_ref_Base, CGene_ref_Base, CSeq_annot_Base, CPC_Source_Base, CMSSearchSettings_Base, CDbtag_Base, CEntrez2_term_query_Base, CEntrez2_term_pos_Base, CEntrez2_id_list_Base, CEntrez2_id_Base, CEntrez2_hier_query_Base, CEntrez2_boolean_exp_Base, CBlastOutput_Base
• SetDb_count() : CEntrez2_info_Base
• SetDb_descr() : CEntrez2_db_info_Base
• SetDb_info() : CEntrez2_info_Base
• SetDb_len() : CStatistics_Base
• SetDb_menu() : CEntrez2_db_info_Base
• SetDb_name() : CEntrez2_db_info_Base
• SetDb_num() : CStatistics_Base
• SetDb_restriction() : CBlast4_common_options_Base
• SetDb_to() : CEntrez2_link_info_Base
• SetDbFilteringAlgorithmId() : CRemoteBlast
• SetDbFrom() : CLinkSet_Base, CELink_Request
• SetDbGeneticCode() : CBlastOptionsLocal, CTBlastxOptionsHandle, CTBlastnOptionsHandle, CRPSTBlastnOptionsHandle, CBlastOptions
• SetDbgInfo() : CStatementBase
• SetDbInfo() : CEInfoResult_Base
• SetDbLength() : CBlastOptionsLocal, CSimpleB2SWrapper, CBlastOptionsHandle, CBlastOptions
• SetDbList() : CEInfoResult_Base
• SetDBMap() : CBLAST_DB_Dialog
• SetDbName() : CConnection, CDbInfo_Base, CShowBlastDefline, CDisplaySeqalign
• SetDbname() : CEMBL_xref_Base, CINSDXref_Base, CGBXref_Base
• SetDbref() : CSP_block_Base
• SetDBScanInfo() : CBlastTracebackSearch
• SetDbSeqNum() : CBlastOptionsLocal, CBlastOptionsHandle, CBlastOptions
• SetDbSnpBuild() : CPrimarySequence_Base::C_Attlist, CExchangeSet_Base::C_Attlist, CAssembly_Base::C_Attlist
• SetDbSnpOrgAbbr() : CExchangeSet_Base::C_SourceDatabase::C_Attlist
• SetDBT_Size() : CBDB_BufferManager
• SetDbtag() : CPerson_id_Base
• SetDbTo() : CLinkSetDb_Base
• SetDbType() : CShowBlastDefline, CDisplaySeqalign
• SetDburl() : CPC_XRefData_Base
• SetDbversion() : CMSResponse_Base
• SetDbxref() : CSeq_feat_Base, CSeqdesc_Base
• SetDdbj() : CSeq_id_Base
• SetDead() : CTL_CmdBase, CTL_Connection, ctlib::Connection
• SetDebugInformationFormat() : CTool_Base::C_Attlist
• SetDecoder() : CStringPairs< TContainer >
• SetDecorateStyle() : CSeqGraphicConfig
• SetDecSep() : mu::Parser
• SetDef() : CHit_Base
• SetDefault() : CBitStringFunctions, CAnyContentFunctions, CCharVectorFunctions< Char >, CCharPtrFunctions< T >, CStringFunctions< T >, CPrimitiveTypeInfoIntFunctions< T >, CNullBoolFunctions, CPrimitiveTypeFunctions< T >, DTDElement, CDataMember, CTypeInfo, CVoidTypeFunctions, CTimeFunctions, CStlOneArgTemplate, CStlClassInfoFunctions< Container >, CPrimitiveTypeInfo, CPointerTypeInfo, CMemberInfo, CEnumeratedTypeInfo, CClassTypeInfo, CChoiceTypeInfo, COldAsnTypeInfo, COctetStringTypeInfo, CSequenceOfTypeInfo, CAliasTypeInfo, CSeqTable_column_Base, CPluginArg_Base, CFormArgDesc, CDB_UserHandler, CExceptionReporter, CParam< TDescription >
• SetDefaultArrayLength() : CSpectrum_Base::C_Attlist, CChromatogram_Base::C_Attlist
• SetDefaultAutoIncRequestIDOnPost() : CRequestContext
• SetDefaultCddPatterns() : CMultiAlignerOptions
• SetDefaultCurrentStyle() : CSettingsSet
• SetDefaultDTDFilePrefix() : CObjectOStreamXml
• SetDefaultFlags() : CObjectConverter
• SetDefaultfunc() : CUserFormat_Base
• SetDefaultFunction() : CHookData< Hook, Function >
• SetDefaultInstrumentConfigurationRef() : CRun_Base::C_Attlist
• SetDefaultLabeling() : StyleSettings
• SetDefaultMemoryBound() : CSeqDBImpl, CSeqDBAtlas, CSeqDBMapStrategy, CSeqDB
• SetDefaultMethod() : CAlnMultiModel
• SetDefaultMode() : CDirEntry
• SetDefaultModeGlobal() : CDirEntry
• SetDefaultNamespace() : CCodeGenerator
• SetDefaultNamespaceName() : CSoapServerApplication, CSoapHttpClient
• SetDefaultObjectNamespaceName() : CSoapMessage
• SetDefaultPriority() : CDataSource
• SetDefaultRequest() : CRemapClient_Base, CID2Client_Base, CEntrez2Client_Base, CBlast4Client_Base
• SetDefaults() : CBlastOptionsHandle, CBlastNucleotideOptionsHandle
• SetDefaultSchemaNamespace() : CObjectOStreamXml
• SetDefaultScoringMethods() : CSGAlignmentDS
• SetDefaultsMode() : CBlastOptionsRemote, CBlastOptions
• SetDefaultSorter() : CwxTableListCtrl
• SetDefaultStringEncoding() : CObjectOStreamXml, CObjectOStreamJson, CObjectIStreamXml
• SetDefaultStyle() : CBaseTextOStream, CStyledTextOStream, CCalcCharsOStream, CCalcSizeOStream, CCalcNBPosOStream, CRowStyleCatalog
• SetDefaultValue() : SPluginParams
• SetDefaultValues() : SPluginParams
• SetDefaultVisibleRangePolicy() : CVisibleRangeEvent, CVisibleRange, CProjectViewLinkManager
• SetDefiniteSites() : CREnzResult
• SetDefinition() : CINSDSeq_Base, CGBSeq_Base
• SetDefline() : CTSeq_Base, CMSPepHit_Base
• SetDeflines() : CWriteDB_Impl, CWriteDB
• SetDefs() : CFeatDefGroupSet_Base
• SetDelayBuffer() : CVariantInfo, CMemberInfo
• SetDelayIndex() : CChoiceTypeInfo
• SetDelete() : CSeq_submit_Base::C_Data
• SetDeleted() : CSeq_hist_Base
• SetDeleteList() : CFileDeleteAtExit
• SetDeleteReadOnlyFiles() : CFileAPI
• SetDeletions() : oligofar::TAlignerBase< CQuery, CSubject >
• SetDelta() : CMSBasicMatchedPeak, CLadder, CSeq_ext_Base
• SetDendiag() : CSeq_align_Base::C_Segs
• SetDenseg() : CSeq_align_Base::C_Segs
• SetDensity() : CDensity_coordinates_Base, CCoordinates_Base, CHsp_Base
• SetDensity_units() : CModel_space_Base
• SetDependency() : CArgDescriptions
• SetDependent_rules() : CComment_rule_Base
• SetDeposition() : CPDB_block_Base
• SetDepth() : CImage, CSGGenBankDS, CSegmentMapTrack
• SetDesc() : CProt_ref_Base, CGene_ref_Base, CSeq_annot_Base, CPluginArg_Base, CGBenchFeedbackRequest_Base
• SetDescr() : CFeedbackReport, CUnsupportedEditSaver, CSeq_entry_EditHandle, CSeq_entry_Info, CBioseq_Base_Info, CEditsSaver, IEditSaver, CBioseq_set_EditHandle, CBioseq_EditHandle, CID2S_Chunk_Data_Base, CSeq_entry, CBioseq_set_Base, CImp_feat_Base, CSeqEdit_Cmd_AddAnnot_Base::C_Search_param, CBioseq_Base, CProject_descr_Base, CProject_Base, CPC_AssayTargetInfo_Base, CPC_AssaySubmit_Base::C_Assay, CPC_AssayPanel_Base, CPC_AssayDRAttr_Base, CBiostruc_feature_set_Base, CAlign_stats_Base, CModel_coordinate_set_Base, CBiostruc_model_Base, CResidue_graph_Base, CMolecule_graph_Base, CBiostruc_set_Base, CBiostruc_residue_graph_set_Base, CBiostruc_graph_Base, CBiostruc_annot_set_Base, CBiostruc_Base, CGC_Sequence_Base, CGC_Genome_Base, CGC_Assembly_Base, CCit_sub_Base, CMapItem, CProjectItem_Base, IGBProject, CGBWorkspace_Base, CGBProjectHandle, CGBProject_ver2_Base, CGBProject_ver2, CGBProject_Base, CGBProject, CWorkspaceFolderPrx, CWorkspacePrx, CProjectItemPrx, CProjectFolderPrx, CProjectEditDlg, CProjectPrx, CFolderEditDlg
• SetDescr_level() : CID2_Get_Blob_Details_Base
• SetDescr_type_mask() : CID2_Get_Blob_Details_Base
• SetDescription() : pythonpp::CExtType, CDbInfo_Base, CAutoDefParsedClause, CPC_DBTracking_Base, CPC_ResultType_Base, CPC_AssayPanelMember_Base, CPC_AssayDescription_Base, CMim_allelic_variant_Base, CHG_Commentary_Base, CCn3d_user_annotation_Base, CUpdate_align_Base, CReject_id_Base, CCdd_tree_Base, CCdd_pref_nodes_Base, CCdd_pref_node_descr_Base, CCdd_Base, CAlign_annot_Base, CBlast4_database_info_Base, CTemplateScoringMethod, CUIObject, ITemplateUITool, CMessageHistoryInfo_Base, CEventRecord, CDiagErrCodeInfo, CTool_Base::C_Attlist, CMzData_Base
• SetDescrText() : CStatusMessageSlotPanel
• SetDestination() : CPluginMessage_Base
• SetDestroyTimeout() : CThreadPool_Impl, CThreadPool
• SetDetail() : CSoapFault_Base
• SetDetect64BitPortabilityProblems() : CTool_Base::C_Attlist
• SetDetector() : CComponentList_Base::C_E_ComponentList::C_SAD, CInstrument_Base
• SetDiag() : CSpliced_exon_chunk_Base
• SetDiagNode() : CCommentDiagHandler
• SetDiagnosticsTesting() : CwxMainFrame, CFrameworkDemoGUI
• SetDialog() : CFileLoadManager
• SetDictionary() : CPhyTreeNode, CSearchControl, CSearchFormBase, IDMSearchForm
• SetDiffuse() : CGlMaterial, CGlLight
• SetDim() : CAnchoredAln, CStd_seg_Base, CSeq_align_Base, CPacked_seg_Base, CDense_seg_Base, CDense_diag_Base
• SetDimension() : CRegion_similarity_Base, CChem_graph_alignment_Base
• SetDirect() : CAlignRange< Position >
• SetDirectDB() : CBDB_Env
• SetDirection() : CGlLight
• SetDirectLog() : CBDB_Env
• SetDirty() : CSeqGraphicConfig, CHistParams, CGBWorkspace, CGBProjectHandle
• SetDirtyFlag() : CGBProject_ver2
• SetDirtyState() : IPhyGraphicsNode
• SetDisabled() : CHTML_option, CHTML_optgroup, CProjectItem_Base, CGBProjectHandle_Base
• SetDisableSpecificWarnings() : CTool_Base::C_Attlist
• SetDisc() : CSeq_align_Base::C_Segs
• SetDiscard() : CID2_Reply_Base
• SetDiscardCurrObject() : CObjectIStream, CObjectsSniffer
• SetDisco_megablast_options() : CBlast4_common_options_nucleotide_query_Base
• SetDiscontinue_date() : CGene_track_Base
• SetDiskInitialized() : CNCFileSystem
• SetDispatchedServer() : CDBConnectionFactory::CRuntimeData
• SetDispatcher() : CAppJobEventTranslator, IAppJobListener
• SetDisplay_name() : CGC_Assembly_Base
• SetDisplay_str() : CMaps_Base
• SetDisplaygroup() : CFeatDef_Base
• SetDisplayLine() : CSeqTextVariationGraph
• SetDisplayMode() : CTaxTreeBrowser
• SetDisplayOptions() : CRuler
• SetDisplayStyle() : IAlignRow, CAlnVecRow
• SetDisplayType() : CSeqTextDisplayChoiceList
• SetDist() : CPhyNodeData
• SetDistance() : CCamera_Base, CSeqTree_node_Base, CCdd_Base, CPhyNewickNode
• SetDistanceMethod() : CTreeBuilderParams
• SetDistanceMode() : CGuideTree
• SetDistances() : CHG_Entry_Base, CDistanceMatrix_Base
• SetDistFromRoot() : CPhyTreeNode
• SetDistMat() : SLC_TreeAlgorithm, NJ_TreeAlgorithm, TreeAlgorithm
• SetDistMatrix() : CClusterer
• SetDistMethod() : CGuideTreeCalc
• SetDistRendering() : IPhyloTreeRenderer
• SetDiv() : CTaxon1_data_Base, COrgName_Base, CGB_block_Base, CEMBL_block_Base, CAffil_Base::C_Std
• SetDiv_ranks() : CTriangle_Base
• SetDivision() : CINSDSeq_Base, CGBSeq_Base
• SetDivision_changed() : CT3RefreshFlags_Base
• SetDlgAttrs() : CMultiFileInput
• SetDlgParent() : CMultiFileInput
• SetDlgTitle() : CMultiFileInput
• SetDllNamePrefix() : CPluginManager_DllResolver
• SetDllStdSearchPath() : C_xDriverMgr, C_DriverMgr, CPluginManager< TClass >
• SetDn() : CPC_AssayDRAttr_Base
• SetDNAScoringMethod() : CSGAlignmentDS
• SetDo_not_explode() : CEntrez2_boolean_term_Base
• SetDo_not_translate() : CEntrez2_boolean_term_Base
• SetDoc_count() : CEntrez2_db_info_Base
• SetDoc_type() : CId_pat_Base, CCit_pat_Base
• SetDockContainer() : IDockableWindow, CDockPanel, CDockSplitter, CDockNotebook, CFloatingFrame
• SetDocRootURL() : CClassCode
• SetDocSum() : CESummaryResult_Base::C_Data
• SetDocsum_data() : CEntrez2_docsum_Base
• SetDocsum_field_count() : CEntrez2_db_info_Base
• SetDocsum_fields() : CEntrez2_db_info_Base
• SetDocumentation() : CBlast4_task_info_Base
• SetDoHTML() : CFlatFileConfig
• SetDoi() : CArticleId_Base
• SetDomain() : CChem_graph_alignment_Base, CCgiCookie
• SetDomainResFreqBoost() : CMultiAlignerOptions
• SetDomains() : CHG_Gene_Base
• SetDone() : CGetOpt
• SetDonor() : CGnomon_param_Base::C_Param
• SetDonor_after_exon() : CSpliced_exon_Base
• SetDoSelectAll() : CObjectListWidgetSel
• SetDouble() : CObjectList, CPluginValue_Base, CPluginValue, CPluginArg, CBDB_FieldSimpleFloat< T >, IBDB_FieldConvert, FloatingPointSpinCtrl, CSupDataArray_Base::C_FDIBSTU
• SetDoublenum() : CMSSearchSettings_Base
• SetDoublewin() : CMSSearchSettings_Base
• SetDownload_path() : CGBenchVersionReply_Base
• SetDoxygenComments() : CClassCode
• SetDoxygenGroup() : CClassCode
• SetDoxygenGroupDescription() : CCodeGenerator
• SetDoxygenIngroup() : CCodeGenerator
• SetDr() : CPC_AssayPanelMember_Base, CPC_AssayDescription_Base
• SetDr_id() : CPC_ConcentrationAttr_Base
• SetDraft_bases() : CGC_Scaf_stats_Base::C_Composition
• SetDrawAxes() : CGraphPanel
• SetDrawGrid() : CGraphPanel
• SetDrawLines() : CScatterGraph
• SetDriverName() : CDbapiSampleApp, CDBDefaultConnParams, CDBConnParamsBase, impl::CDBConnParamsBase
• SetDropOff() : CElementaryMatching
• SetDSContext() : CSeqGraphicRenderer, CFeaturePanelDS, CFeaturePanel, CAlignmentTrack
• SetDstLoc() : CSeq_loc_Conversion
• SetDt() : CRemap_reply_Base, CEntrez2_reply_Base
• SetDTDFileName() : CObjectOStreamXml
• SetDTDFilePrefix() : CObjectOStreamXml
• SetDTDPublicId() : CObjectOStreamXml
• SetDumpnames4class() : CTaxon1_resp_Base, CTaxon1_req_Base
• SetDustFiltering() : CBlastOptionsLocal, CBlastOptions, CBlastNucleotideOptionsHandle
• SetDustFilteringLevel() : CBlastOptionsLocal, CBlastOptions, CBlastNucleotideOptionsHandle
• SetDustFilteringLinker() : CBlastOptionsLocal, CBlastOptions, CBlastNucleotideOptionsHandle
• SetDustFilteringWindow() : CBlastOptionsLocal, CBlastOptions, CBlastNucleotideOptionsHandle
• SetE_value() : CBlast4_simple_alignment_Base, CBlast4_cutoff_Base
• SetEatGaps() : CProSplignOutputOptions
• SetEc() : CProt_ref_Base
• SetEData_set_id_uids() : CData_set_id_Base::C_Data_set_id_uids
• SetEditHistory() : CMim_entry_Base
• SetEdition() : CMim_reference_Base
• SetEditors() : CMim_reference_Base
• SetEditTSE() : CTSE_ScopeInfo
• SetEff_search_space() : CBlast4_common_options_Base
• SetEff_space() : CStatistics_Base
• SetEffectiveLengthsOptionsDefaults() : CBlastRPSOptionsHandle, CBlastProteinOptionsHandle, CBlastOptionsHandle, CBlastNucleotideOptionsHandle
• SetEffectiveSearchSpace() : CBlastOptionsLocal, CBlastOptionsHandle, CBlastOptions, CScoreBuilder
• SetEffSearchSpace() : CSimpleB2SWrapper
• SetEGQueryResult() : CResult_Base
• SetEHistoryItem() : CEHistoryResult_Base
• SetElapsed() : CQueryParseNode
• SetElement() : CPC_Atoms_Base, CAtom_Base
• SetElementColor() : CSeqGraphicColorConfigWrite
• SetElementid() : CCdd_book_ref_Base
• SetElementType() : CUniSequenceDataType
• SetEm() : CMedline_entry_Base
• SetEMail() : WizardPage2
• SetEmail() : CEUtils_ConnContext, CContact_info_Base, CMSResponse_Base, CAffil_Base::C_Std
• SetEmail_addr() : CGBenchFeedbackRequest_Base
• SetEmailAddr() : CFeedbackReport
• SetEmbedded() : DTDElement
• SetEmbl() : CSeq_id_Base, CSeqdesc_Base
• SetEmbl_code() : CTaxon1_data_Base
• SetEMethod() : CAssay_Base::C_Method
• SetEmissive() : CGlMaterial
• SetEmpty() : CSeq_loc_Base, CID2_Reply_Base::C_Reply, CTempTrackProxy, CPBuffer, CLocalRange< Position >
• SetEnableColoration() : CSGAlignmentDS
• SetEnableCOMDATFolding() : CTool_Base::C_Attlist
• SetEnabled() : CPluginLibInfo_Base
• SetEnableFunctionLevelLinking() : CTool_Base::C_Attlist
• SetEncodedLength() : CBinaryDataArray_Base::C_Attlist
• SetEncoder() : CStringPairs< TContainer >
• SetEncoding() : CObjectOStreamXml, CDBDefaultConnParams, CDBConnParamsBase, impl::CDBConnParamsBase
• SetEnd() : CRangeMapIterator< Traits >, CHG_Domain_Base, CComponent_Base::C_Attlist, CBlast4_range_Base, CRSite
• setEnd() : Block
• SetEnd_date() : CEntrez2_dt_filter_Base
• SetEnd_of_reply() : CID2_Reply_Get_Seq_id_Base, CID2_Reply_Get_Blob_Id_Base, CID2_Reply_Base
• SetEndChar() : CAlnVec
• SetEndColor() : CTranslationConfig
• SetEndGap() : CAlnReader
• SetEndGapChar() : CMultiAlnPrinter
• SetEndGapDetect() : CSplignParams
• SetEndGapDetection() : CSplign
• SetEndGapExtendPenalty() : CMultiAlignerOptions
• SetEndGapOpenPenalty() : CMultiAlignerOptions
• SetEndian() : CData_Base::C_Attlist
• SetEndpoints() : CBlastTabularInfo
• SetEndRadius() : CGlTube< Curve >
• SetEndSpaceFree() : CNWAligner
• SetEndWg() : CPSSMAligner
• SetEndWs() : CPSSMAligner
• SetEnforcedStdXml() : CDataType, CObjectOStreamXml, CObjectIStreamXml
• SetEnt() : CID1server_maxcomplex_Base
• SetEntrez() : CNcbi_mime_asn1_Base
• SetEntrez_query() : CParameters_Base, CBlast4_common_options_db_restriction_Base
• SetEntrezQuery() : CRemoteBlast
• SetEntrezQueryLimitation() : CSearchDatabase
• SetEntrezTerm() : CShowBlastDefline, CDisplaySeqalign
• SetEntries() : CHG_EntrySet_Base
• SetEntropy() : CStatistics_Base
• SetEntry() : oligofar::CPermutator8b, CFlatFileContext, CProjectItem_Base::C_Item
• SetEntry_date() : CGB_block_Base
• SetEntry_id() : CSeqEdit_Cmd_RemoveSeqEntry_Base
• SetEntry_type() : CPluginValueConstraint_Base
• SetEntry_version() : CINSDSeq_Base, CGBSeq_Base
• SetEntrygroup() : CFeatDef_Base
• SetEntrys() : CSeq_submit_Base::C_Data
• SetEnum() : CMod, CNumbering_Base, CPrintForm_Base
• SetEnumNamespace() : CEnumTypeStrings
• SetEnv() : CBDB_BlobSplitStore< TBV, TObjDeMux, TL >, CBDB_RawFile, CBDB_ExtBlobStore< TBV >, CBDB_BlobDictStore< Key, Dictionary, Store >, CBDB_BlobDictionary< Int4 >, CBDB_BlobDictionary< Uint4 >
• SetEnvironment() : CNcbiApplication
• SetEnzyme() : CSearch< LEGACY, NHITS >, CMSSearchSettings_Base
• SetEquiv() : CSeq_loc_Base, CPub_Base
• SetErrCode() : CExpectedError
• SetErrIndex() : CValidErrItem_Base
• SetErrMsg() : CExpectedError
• SetError() : CMSPeak, CCompression, CT3Reply_Base, CTaxon1_resp_Base, CRMReply_Base, CMSResponse_Base, CMSHitSet_Base, CMla_back_Base, CID2_Reply_Base, CID1server_back_Base, CE2Reply_Base, CCurveCubic, CCurveBezier, ICurve, CGlTube< Curve >, CGlCurve< Curve >, CPluginReplyAction_Base
• SetERROR() : CESummaryResult_Base::C_Data, CESpellResult_Base, CESearchResult_Base::C_Data, CEPostResult_Base, CLinkSetDb_Base, CLinkSet_Base::C_Data, CIdUrlList_Base, CIdCheckList_Base, CELinkResult_Base, CEInfoResult_Base
• SetErrorCode() : CNcbiDiag
• SetErrorContainer() : CMultiReaderApp
• SetErrorHandler() : CArgDescMandatory, CAgpReader, CAgpRow, CArgDesc, CArgDescriptions
• SetErrorList() : CESearchResult_Base
• SetErrorMsg() : CJobRun
• SetErrors() : CBlast4_reply_Base
• SetErrPrefix() : CBDB_Env
• SetErrs() : CValidError_Base
• SetETrackType() : CGwasLoadParams
• SetEval_boolean() : CE2Request_Base, CE2Reply_Base
• SetEvalue() : CMSHits_Base, CHsp_Base, CBlast4_common_options_Base
• SetEValue() : CBLASTSearchParamsPanel, CBlastTabular
• SetEValueThreshold() : CSimpleB2SWrapper
• SetEvalueThreshold() : CBlastOptionsLocal, CBlastOptionsHandle, CBlastOptions
• SetEvent() : CTrItemPacked< bitst, bitsc >
• SetEventDisplayTime() : CStatusBarService
• SetEventHandler() : CHTMLNode
• SetEvidence() : CTxinit_Base, CAlign_annot_Base
• SetExactDepth() : SAnnotSelector
• SetExactFlevel() : CGffExportParams
• SetExactmass() : CMSSearchSettings_Base
• SetExactStatusNoLock() : CJobStatusTracker
• SetExcept() : CSeq_feat_Base
• SetExcept_text() : CSeq_feat_Base
• SetException() : CAssay_Base::C_Method::C_EMethod
• SetExceptionFlags() : CNCBINode
• SetExceptionHandling() : CTool_Base::C_Attlist
• SetExclude_blobs() : CID2_Request_Get_Blob_Info_Base::C_Blob_id::C_Resolve
• SetExcludeAffOrgs() : CAutoDefModifierCombo
• SetExcludeCfOrgs() : CAutoDefModifierCombo
• SetExcludedFromBuild() : CFileConfiguration_Base::C_Attlist
• SetExcludeExternal() : SAnnotSelector
• SetExcludeNrOrgs() : CAutoDefModifierCombo
• SetExcludePotential() : CProjectsLstFileFilter
• SetExcludeSpOrgs() : CAutoDefModifierCombo
• SetExclusiveMode() : CRemoteAppRequestMB_Impl
• SetExec() : CQueryFunctionBase
• SetExecCntxInfo() : impl::CConnection, CDBL_Cmd, CTL_CmdBase
• SetExecuteList() : CGridDebugContext
• SetExemplarSs() : CRs_Base::C_Sequence::C_Attlist
• SetExitCode() : CDiagContext, CNcbiApplication
• SetExitSignal() : CDiagContext
• SetExon() : CGnomon_param_Base::C_Param
• SetExonBioEnd() : CAliToSeq_align
• SetExonBioStart() : CAliToSeq_align
• SetExons() : CTwoStage, CProSplign::CImplementation, CSpliced_seg_Base, CProSplign
• SetExp() : CEntrez2_boolean_exp_Base, CCitRetract_Base
• SetExp_code() : CTx_evidence_Base
• SetExp_ev() : CSeq_feat_Base
• SetExp_method() : CPDB_block_Base
• SetExpandedValue() : CAsnElementBlockCollapsed
• SetExpDate() : CCgiCookie
• SetExpect() : CParameters_Base
• SetExpectedReadCount() : oligofar::CQueryHash
• SetExperiment() : CUser_object
• SetExpIons() : CMSMatchedPeak
• SetExpired() : CNetBlastDMSearchFormPanel
• SetExplicit() : CQueryParseNode, CResidue_pntrs_Base
• SetExpMass() : CMSSpectrumMatch
• SetExponent() : CGlLight
• SetExportSpecifier() : CClassCode
• SetExpr() : mu::ParserBase
• SetExpression() : CTxinit_Base
• SetExpression_system() : CTx_evidence_Base
• SetExpTime() : CCgiCookie
• SetExt() : CSeq_feat_Base, CRNA_ref_Base, CSeqEdit_Cmd_ChangeSeqAttr_Base::C_Data, CSpliced_exon_Base, CSparse_seg_Base, CSeq_align_Base, CSeq_inst_Base
• SetExtensible() : CINSDTagsetRules_Base, CGBTagsetRules_Base
• SetExtensionBounds() : CBlockedAlignmentEditor
• SetExtentionPenaltyDropoff() : oligofar::CAligner
• SetExternal() : DTDEntity, CID2_Request_Get_Blob_Id_Base
• SetExternalGlyphs() : CSeqGraphicPane, CSeqGraphicWidget, CSeqGraphicRenderer, CFeaturePanel
• SetExternalNativeID() : CPrecursor_Base::C_Attlist, CAcquisition_Base::C_Attlist
• SetExternalSpectrumID() : CPrecursor_Base::C_Attlist, CAcquisition_Base::C_Attlist
• SetExtfeatmask() : CID1blob_info_Base
• SetExtra() : CBiostruc_script_step_Base, CGBProject_Base
• SetExtra_acc() : CSP_block_Base, CEMBL_block_Base
• SetExtra_accessions() : CGB_block_Base
• SetExtra_configs() : CGBenchInitReply_Base
• SetExtra_src() : CPRF_block_Base
• SetExtra_terms() : CGene_source_Base
• SetExtraLink() : CStatusMessageSlotPanel, CMessageSlotPopupWindow
• SetExtraMsg() : CODBC_Reporter, impl::CDriverContext, impl::CConnection, CDB_UserHandler, CDB_Exception
• SetExts() : CSeq_feat_Base
• SetFactories() : CTrackContainer, COpenViewDlg
• SetFail() : CProjBulderApp
• SetFailed() : CStatement, CNetBlastDMSearchFormPanel
• SetFailFlags() : CObjectOStream, CObjectIStream
• SetFailFlagsNoError() : CObjectOStream
• SetFailUnresolved() : SAnnotSelector
• SetFalse() : CPrintFormBoolean_Base
• SetFarPlane() : CGlCamera
• SetFastaFile() : oligofar::CBatch, CAgpLoadParams
• SetFastaFlags() : CBasicFastaWrapper
• SetFastaGap() : CAlnReader
• SetFastest_varying() : CDensity_coordinates_Base
• SetFaultactor() : CSoapFault_Base
• SetFaultcode() : CSoapFault_Base
• SetFaultcodeEnum() : CSoapFault
• SetFaultPostFlags() : CSoapServerApplication
• SetFaultstring() : CSoapFault_Base
• SetFavorFarFeatures() : CFlatFileConfig
• SetFavorSizeOrSpeed() : CTool_Base::C_Attlist
• SetFax() : CContact_info_Base, CAffil_Base::C_Std
• SetFDIBSTU() : CSupDataArray_Base
• SetFdict() : CBioTreeContainer_Base
• SetFeat() : Ctbl, CID2S_Seq_annot_Info_Base, CSeq_loc_Base, CSeqEdit_Cmd_ReplaceAnnot_Base::C_Data, CSeqEdit_Cmd_RemoveAnnot_Base::C_Data, CSeqEdit_Cmd_AddAnnot_Base::C_Data, CSeqEdit_Cmd_AddAnnot_Base::C_Search_param::C_Obj
• SetFeat_has_product() : CPluginValueConstraint_Base
• SetFeat_ids() : CID2S_Chunk_Content_Base
• SetFeat_subtype() : CSeq_table_Base, CPluginValueConstraint_Base
• SetFeat_type() : CSeq_table_Base, CPluginValueConstraint_Base
• SetFeat_type_mask() : CID2_Get_Blob_Details_Base
• SetFeat_types() : CID2S_Seq_feat_Ids_Info_Base
• SetFeatComparator() : SAnnotSelector
• SetFeatdef_key() : CFeatDef_Base
• SetFeatIndent() : CFlatItemFormatter
• SetFeatList() : CAllOtherFeaturesTrack
• SetFeatMap() : oligofar::CSeqScanner
• SetFeatMode() : CTextPanel
• SetFeatPanel() : CwxTrackSettingsDlg
• SetFeatSettings() : CSeqGraphicConfig
• SetFeatSubtype() : SAnnotTypeSelector, SAnnotSelector, CFeatureTrack
• SetFeatType() : SAnnotTypeSelector, SAnnotSelector
• SetFeatTypes() : CPromote
• SetFeature() : COther_feature_Base, CPhyTreeNode, CBioTree< TBioNode >::CBioNode, CBioTreeFeatureList
• SetFeature_do() : CBiostruc_script_step_Base
• SetFeature_table() : CINSDSeq_Base, CGBSeq_Base
• SetFeatureColorationChoice() : CSeqTextPaneConfig, CSeqTextConfig
• SetFeatureDepth() : CGffExportParams
• SetFeatureid() : CNodeFeature_Base
• SetFeatureListType() : CAutoDef
• SetFeatures() : CBiostruc_feature_set_Base, CBiostruc_annot_set_Base, CBiostruc_Base, CCdd_Base, CNode_Base
• SetFeatureType() : CSelectFeatureDlg
• SetFeedback() : CGBenchServiceRequest_Base, CGBenchServiceReply_Base
• SetFetchDirection() : CBDB_FileCursor
• SetFF() : CFilter_Base, CFilter_Base::C_FF
• SetFgColor() : CBoundaryParams
• SetFGCommentColor() : CSeqGraphicConfig
• SetField() : CSageData, CFieldList_Base, CESearch_Request, CUser_object, CUser_field, CEntrez2_term_query_Base, CEntrez2_term_pos_Base, CEntrez2_hier_query_Base, CEntrez2_boolean_term_Base, CGuiRegistry, CGuiRegistry::CReadWriteView, CRegistryFile, CBDB_FieldSimple< T >, CBDB_QueryNode
• SetField_count() : CEntrez2_db_info_Base
• SetField_descr() : CEntrez2_field_info_Base
• SetField_description() : CEntrez2_docsum_field_info_Base
• SetField_id() : CSeqTable_column_info_Base
• SetField_menu() : CEntrez2_field_info_Base
• SetField_name() : CField_rule_Base, CSeqTable_column_info_Base, CEntrez2_field_info_Base, CEntrez2_docsum_field_info_Base, CEntrez2_docsum_data_Base
• SetField_type() : CEntrez2_docsum_field_info_Base
• SetField_value() : CEntrez2_docsum_data_Base
• SetFieldAt() : CGuiRegistryUtil
• SetFieldCompareLimit() : CBDB_BufferManager, CBDB_File
• SetFieldList() : CDbInfo_Base
• SetFieldOfView() : CGlCamera
• SetFieldOwnership() : CBDB_BufferManager, CBDB_File
• SetFieldRef() : CUser_object, CUser_field
• SetFields() : CBlastTabularInfo, CComment_rule_Base, CUser_field_Base::C_Data, CEntrez2_db_info_Base
• SetFieldsCount() : CStatusBar
• SetFieldToValue() : CGuiRegistry, CGuiRegistry::CReadWriteView, CRegistryFile
• SetFieldWindow() : CStatusBar
• SetFig() : CPubdesc_Base
• SetFile() : CNcbiDiag, CFilter_Base::C_FF::C_E_FF, CFiles_Base
• SetFile_path() : CGBenchFeedbackAttachment_Base
• SetFileConfiguration() : CFFile_Base
• SetFileContent() : CFileDescription_Base
• SetFileDescription() : CMzML_Base
• SetFileExtMask() : CAdvancedFileInput
• SetFileFormat() : CPhyLoadParams
• SetFileHandle() : CFileIO
• SetFileInfo() : CZipCompressor
• SetFileInitialized() : CNCFileSystem
• SetFileListFileName() : CCodeGenerator
• SetFileName() : CBlastHitMatrix, CObjectList_Base::C_Data, CGffExportParams, CFlatFileExportParams, CFastaExportParams, CAgpExportParams, CPhyLoadParams, CAsnExportParams
• SetFilename() : SFileDlgData, CPrintOptions, CGBWorkspace, CGBProjectHandle_Base, CWorkspacePrx, CProjectEditDlg, CProjectPrx, CCgiResponse, CCgiEntry
• SetFileNamePrefix() : CCodeGenerator
• SetFileNamePrefixSource() : CCodeGenerator
• SetFilenames() : CGwasTrackLoadManager, CWigLoadManager, CGffLoadManager, CFASTAFormatLoadManager, CBedLoadManager, CAgpLoader, CPhyLoader, CMultiFileInput, CWorkspaceFormatLoadManager, CProjectFormatLoadManager, CFileLoadManager, IFileFormatLoaderManager, COpenDlg, CFileLoadOptionPanel, CFileAutoLoader, CASNFormatLoadManager
• SetFileOpen() : CNCFSOpenFile
• SetFileOwner() : CWinSecurity
• SetFilePos() : CFileIO
• SetFiles() : CVisualStudioProject_Base
• SetFilesave_name() : CGC_Assembly_Base
• SetFileSize() : CFileIO
• SetFileType() : CSupSourceFile_Base, CSourceFile_Base
• SetFilter() : oligofar::CSeqScanner, oligofar::CBatch, CParameters_Base, CwxTableListCtrl, CSnpTableWidget, CSnpTableData, CDiagConsoleList, CFilter_Base::C_FF::C_E_FF, CFilter_Base::C_Attlist, CFiles_Base, CAlignFilter
• SetFilter_date() : CEntrez2_limits_Base
• SetFiltered() : CAutoCompleteCombo
• SetFilteredQueryRegions() : CSearchResultSet
• SetFilteringAlgorithm() : CSearchDatabase
• SetFilteringAlgorithmId() : CSeqDbSeqInfoSrc
• SetFilterLowComplex() : CBLASTSearchParamsPanel
• SetFilterMag() : CGlTexture
• SetFilterMin() : CGlTexture
• SetFilters() : CSearchJobBase, CSearchToolBase, IDMSearchTool
• SetFilterString() : CBlastOptionsLocal, CBlastOptionsHandle, CBlastOptions
• SetFinalData() : CPssm_Base
• SetFinalValue() : oligofar::CProgressIndicator
• SetFindname() : CTaxon1_resp_Base, CTaxon1_req_Base
• SetFingerprint() : CDockLayoutTree::CNode, CViewDataLink_Base
• SetFini() : CTaxon1_resp_Base, CTaxon1_req_Base, CMla_request_Base, CMla_back_Base, CID1server_request_Base, CID1server_back_Base
• SetFinish_params() : CBlast4_request_body_Base, CBlast4_reply_body_Base
• SetFinished_bases() : CGC_Scaf_stats_Base::C_Composition
• SetFirst() : CName_std_Base
• SetFirst_exon_length() : CExon_params_Base
• SetFirst_exon_phase_probabilities() : CExon_params_Base
• SetFirst_id() : CSparse_align_Base
• SetFirst_name() : CContact_info_Base
• SetFirst_starts() : CSparse_align_Base
• SetFirst_term_pos() : CEntrez2_term_pos_Base
• SetFirstFrom() : CAlignRange< Position >
• SetFirstSpan() : CWig2tableApplication::SStat
• SetFirstValue() : CWig2tableApplication::SStat
• SetFixed() : CMod, CMSSearchSettings_Base
• SetFixed_level() : CTaxElement_Base
• SetFixedBaseAddress() : CTool_Base::C_Attlist
• SetFixedLimits() : CGraphPanel
• SetFixedPosition() : CAxisRenderer
• SetFlag() : CPurgeFlagGuard, CFastaOstream
• SetFlags() : oligofar::CMappedAlignment, oligofar::CAlignTest, CMultiReaderApp, CTar, CCompression, ICompression, MSerial_Flags, CObjectOStream, CObjectIStream, CFlatFileConfig, CPromote, CSeqref, CSeqMap_CI, SSeqMapSelector, CLayoutComment, CSQLITE_Connection
• SetFlankPositives() : CProSplignOutputOptions
• SetFlanks() : CTwoStage, CProSplign::CImplementation, CProSplign
• SetFlatFileMode() : CTextPanel
• SetFlatFileStyle() : CTextPanel
• SetFlippedStrand() : CLayoutObject
• SetFloat() : CBDB_FieldSimpleFloat< T >, IBDB_FieldConvert, CSupDataArray_Base::C_FDIBSTU
• SetFmax() : CPC_ResultType_Base::C_Constraints
• SetFmin() : CPC_ResultType_Base::C_Constraints
• SetFocusColumn() : CwxTableListCtrl
• SetFocused() : CAlnMultiRenderer
• SetFocusRow() : CwxTableListCtrl
• SetFolderName() : CFolderEditDlg
• SetFolders() : CWorkspaceFolder_Base, CProjectFolder_Base
• SetFont() : CFontWindow, CTextItemPanel, CSequenceTickGraph, CSequenceTextGraph, CFontConfig, CSGConfigUtils, IPhyloTreeRenderer, CRuler, CGlBitmapFont
• SetFontFace() : CGlBitmapFont
• SetFontFamily() : CTextPanel
• SetFontRotate() : CGlBitmapFont
• SetFonts() : CHitMatrixSeqGraph
• SetFontSize() : CHTML_font, CSeqTextWidget, CSeqTextPaneConfig, CSeqTextPane, CSeqTextFontList, CSeqTextConfig, CTextPanel, CGlBitmapFont
• Setfoo() : oligofar::CAligner_fast, oligofar::CAligner_HSP
• SetFooter() : CPrintOptions
• SetFooterOffset() : CPrintOptions
• SetFootprint() : CSeqTree_node_Base::C_Children
• setFootprintExtension() : CdBlaster
• SetFor() : CSubs_Base::C_Attlist, CHTML_label
• SetForceLocalIDs() : CFastaLoadParams
• SetForegroundColor() : CwxTableListCtrl
• SetForm() : CPrintFormat_Base
• SetFormal_name() : CGene_ref_Base
• SetFormat() : CMultiReaderApp, CRPCClient< TRequest, TReply >, CFlatFileConfig, CMultiAlnPrinter, CPrintTemplate_Base, CStopWatch, CTimeSpan, CTime, CTimeFormat
• SetFormat_options() : CBlast4_get_request_info_reply_Base, CBlast4_queue_search_request_Base
• SetFormatDDBJ() : CFlatFileConfig
• SetFormatEMBL() : CFlatFileConfig
• SetFormatFTable() : CFlatFileConfig
• SetFormatGBSeq() : CFlatFileConfig
• SetFormatGenbank() : CFlatFileConfig
• SetFormatGFF() : CFlatFileConfig
• SetFormatGFF3() : CFlatFileConfig
• SetFormats() : CFileLoadOptionPanel
• SetFormatted() : CPluginReply_Base
• SetFormatter() : CFlatItemOStream
• SetFormattingTemplate() : CAxisRenderer
• SetFormula() : mu::ParserTokenReader, mu::ParserError
• SetForward() : CPCRReaction_Base
• SetFragment() : CUrl
• SetFrame() : CCdregion_Base, CProt_pos_Base, CSeqLocInfo, CBlast4_mask_Base, CWindowManagerService, CMenuService, CDebugDumpContext
• SetFrameshiftOpeningCost() : CProSplignScoring
• SetFrameShiftPenalty() : CBlastOptionsLocal, CTBlastnOptionsHandle, CBlastxOptionsHandle, CBlastOptions
• SetFrameWindow() : CDemoControlsClient
• SetFrange() : CPC_ResultType_Base::C_Constraints
• SetFreqRatios() : CPssmIntermediateData_Base
• SetFreqScale() : CPSSMAligner
• SetFrom() : CSymResolver, CProjectItemsTree, CProjItem, CDataToolGeneratedSrc, CSimpleMakeFileContents, Ctbl_seg, COpenRange< Position >, CSeq_interval_Base, CSeq_map_table_Base, CResidue_interval_pntr_Base, CMim_page_Base, CINSDInterval_Base, CGBInterval_Base, CCn3d_residue_range_Base, CCit_art_Base, CAttrRangeCollection< Attr, Position >, CGnomon_param_Base::C_Gc_content_range
• SetFrom_build() : CRemap_query_Base
• SetFROM_Context() : CQueryParserEnv
• SetFrom_homolog() : CTx_evidence_Base
• SetFset() : CPC_ResultType_Base::C_Constraints
• SetFtable() : CSeq_annot_Base::C_Data
• SetFull() : CName_std_Base
• SetFull_query_range() : CBlast4_simple_alignment_Base
• SetFull_subject_range() : CBlast4_simple_alignment_Base
• SetFullName() : CCv_Base::C_Attlist, CCvLookup_Base::C_Attlist
• SetFullTree() : CDockContainer
• SetFullVersion() : CNcbiApplication
• SetFunction() : CException, CNcbiDiag
• SetFunctions() : CQueryParserEnv, CStlClassInfo_vector< Data >, CStlClassInfo_list< Data >, CPointerTypeInfo
• SetFuzz() : CSeq_point_Base, CPacked_seqpnt_Base, CSeqEdit_Cmd_ChangeSeqAttr_Base::C_Data, CSeq_literal_Base, CSeq_inst_Base
• SetFuzz_from() : CSeq_interval_Base
• SetFuzz_to() : CSeq_interval_Base
• SetFuzzyFrom() : Ctbl_seg
• SetFuzzyTo() : Ctbl_seg
• SetFval() : CPC_InfoData_Base::C_Value, CPC_AssayData_Base::C_Value
• SetFvec() : CPC_InfoData_Base::C_Value
• SetFwdName() : CPCRSet
• SetFwdSeq() : CPCRSet
• SetFxnClass() : CFxnSet_Base::C_Attlist
• SetFxnSet() : CMapLoc_Base, CFxnSet_Base
• SetG() : CColor_prop_Base
• SetGap() : CSeq_data_Base
• SetGap_closure() : CGC_Scaf_stats_Base
• SetGap_count() : CID2S_Bioseq_Info_Base
• SetGap_extend() : CParameters_Base
• SetGap_extension_penalty() : CBlast4_common_options_scoring_Base
• SetGap_open() : CParameters_Base
• SetGap_opening_penalty() : CBlast4_common_options_scoring_Base
• SetGapChar() : CSparseAln, CAlnVec, CMultiAlnPrinter, CSparseAlignment, CSparseMultiDataSource, CAlnVecMultiDataSource, IAlnMultiDataSource
• SetGapExtend() : CFormatRpsDbParameters_Base, CAlgorithm_type_Base
• SetGapExtendPenalty() : CMultiAlignerOptions
• SetGapExtensionCost() : CBlastOptionsLocal, CBlastProteinOptionsHandle, CBlastOptions, CBlastNucleotideOptionsHandle, CProSplignScoring
• SetGapExtentionScore() : oligofar::CScoring
• SetGapExtnAlgorithm() : CBlastOptionsLocal, CBlastOptions, CBlastNucleotideOptionsHandle
• SetGaplessColumnWeights() : CPssmIntermediateData_Base
• SetGapOpen() : CFormatRpsDbParameters_Base, CAlgorithm_type_Base
• SetGapOpeningCost() : CBlastOptionsLocal, CBlastProteinOptionsHandle, CBlastOptions, CBlastNucleotideOptionsHandle, CProSplignScoring
• SetGapOpeningScore() : oligofar::CScoring
• SetGapOpenPenalty() : CMultiAlignerOptions
• SetGapped() : CBlast4_ka_block_Base
• SetGappedExtensionDefaults() : CTBlastxOptionsHandle, CTBlastnOptionsHandle, CBlastRPSOptionsHandle, CBlastProteinOptionsHandle, CBlastOptionsHandle, CBlastNucleotideOptionsHandle, CBlastAdvancedProteinOptionsHandle
• SetGappedMode() : CBlastOptionsLocal, CBlastOptionsHandle, CBlastOptions
• SetGapPreserve() : CSeq_loc_Mapper_Base
• SetGapRemove() : CSeq_loc_Mapper_Base
• SetGaps() : CCdregion_Base, CHsp_Base, CBlastTabular
• SetGapScaleFactor() : CAlgorithm_type_Base
• SetGapTracebackAlgorithm() : CBlastOptionsLocal, CBlastOptions, CBlastNucleotideOptionsHandle
• SetGapTrigger() : CBlastOptionsLocal, CBlastOptionsHandle, CBlastOptions
• SetGapType() : CAgpExportParams
• SetGapXDropoff() : CBlastOptionsLocal, CBlastOptionsHandle, CBlastOptions
• SetGapXDropoffFinal() : CBlastOptionsLocal, CBlastOptionsHandle, CBlastOptions
• SetGBenchGUIApp() : CGBenchGUI, CGBenchApp
• SetGbmoltype() : CMolInfo_Base
• SetGBQuals() : CGffLoadParams
• SetGc_changed() : CT3RefreshFlags_Base
• SetGc_content_range() : CGnomon_param_Base
• SetGCIntronCost() : CProSplignScoring
• SetGcode() : COrgName_Base
• SetGen() : CRNA_ref_Base::C_Ext, CPub_Base
• SetGenbank() : CSeq_id_Base, CSeqdesc_Base
• SetGenCode() : CAlnVec
• SetGene() : CTxinit_Base, CSeqFeatData_Base, CPC_XRefData_Base, CMedline_entry_Base, CEntrezgene_Base
• SetGene_display() : CGene_source_Base
• SetGene_links() : CHG_Gene_Base
• SetGene_source() : CEntrezgene_Base
• SetGeneClusterOppStrand() : CAutoDef
• SetGeneId() : CFxnSet_Base::C_Attlist
• SetGeneID() : CGeneModel
• SetGeneid() : CHG_Gene_Base, CHG_Commentary_Base, CGene_track_Base
• SetGeneName() : CRnaCdsGroup
• SetGeneral() : CSeq_id_Base, CFeat_id_Base, CAnnot_id_Base, CNcbi_mime_asn1_Base
• SetGeneralStyle() : StyleDialog
• SetGenerated() : CExchangeSet_Base::C_Attlist
• SetGenerateDebugInformation() : CTool_Base::C_Attlist
• SetGenerateIndex() : CPrintOptions
• SetGenes() : CHG_Entry_Base
• SetGenetic() : CPIR_block_Base
• SetGeneticCode() : CBLASTSearchParamsPanel
• SetGeneticCodeId() : CBlastSearchQuery
• SetGeneXref() : CSeq_feat_EditHandle, CSeq_feat
• SetGenome() : CBioSource_Base, CEntrez_general_Base::C_Data
• SetGenomeBuild() : CAssembly_Base::C_Attlist
• SetGenomeent() : CProject_item_Base
• SetGenomeid() : CProject_item_Base
• SetGenomeLinks() : CMim_entry_Base
• SetGenomeuid() : CProject_item_Base
• SetGenomic() : CGnomonAnnotator_Base
• SetGenomic_coords() : CGene_commentary_Base
• SetGenomic_end() : CSpliced_exon_Base
• SetGenomic_id() : CSpliced_seg_Base, CSpliced_exon_Base
• SetGenomic_ins() : CSpliced_exon_chunk_Base
• SetGenomic_start() : CSpliced_exon_Base
• SetGenomic_strand() : CSpliced_seg_Base, CSpliced_exon_Base
• SetGenomicRange() : CChainer::CChainerImpl, CChainer
• SetGenomicSeq() : CSplignParams
• SetGenotype() : CRs_Base::C_Attlist
• SetGenus() : CBinomialOrgName_Base
• SetGeometry() : oligofar::CFilter, CSequenceTickGraph, CSequenceTextGraph
• SetGeometryParam() : CRuler
• SetGet_blob() : CID2_Reply_Base::C_Reply
• SetGet_blob_id() : CID2_Request_Base::C_Request, CID2_Reply_Base::C_Reply
• SetGet_blob_info() : CID2_Request_Base::C_Request
• SetGet_blob_seq_ids() : CID2_Reply_Base::C_Reply
• SetGet_chunk() : CID2_Reply_Base::C_Reply
• SetGet_chunks() : CID2_Request_Base::C_Request
• SetGet_data() : CID2_Request_Get_Blob_Info_Base
• SetGet_databases() : CBlast4_request_body_Base, CBlast4_reply_body_Base
• SetGet_docsum() : CE2Request_Base, CE2Reply_Base
• SetGet_info() : CE2Request_Base, CE2Reply_Base
• SetGet_link_counts() : CE2Request_Base, CE2Reply_Base
• SetGet_linked() : CE2Request_Base, CE2Reply_Base
• SetGet_links() : CE2Request_Base, CE2Reply_Base
• SetGet_matrices() : CBlast4_request_body_Base, CBlast4_reply_body_Base
• SetGet_package() : CID2_Reply_Base::C_Reply
• SetGet_packages() : CID2_Request_Base::C_Request
• SetGet_parameters() : CBlast4_request_body_Base, CBlast4_reply_body_Base
• SetGet_paramsets() : CBlast4_request_body_Base, CBlast4_reply_body_Base
• SetGet_programs() : CBlast4_request_body_Base, CBlast4_reply_body_Base
• SetGet_queries() : CBlast4_reply_body_Base
• SetGet_request_info() : CBlast4_request_body_Base, CBlast4_reply_body_Base
• SetGet_search_results() : CBlast4_request_body_Base, CBlast4_reply_body_Base
• SetGet_seq_id() : CID2_Request_Base::C_Request, CID2_Reply_Base::C_Reply
• SetGet_seq_ids() : CID2_Request_Get_Blob_Info_Base
• SetGet_sequence_parts() : CBlast4_request_body_Base, CBlast4_reply_body_Base
• SetGet_sequences() : CBlast4_request_body_Base, CBlast4_reply_body_Base
• SetGet_split_info() : CID2_Reply_Base::C_Reply
• SetGet_term_hierarchy() : CE2Request_Base, CE2Reply_Base
• SetGet_term_list() : CE2Request_Base, CE2Reply_Base
• SetGet_term_pos() : CE2Request_Base, CE2Reply_Base
• SetGetaccpmids() : CMla_request_Base
• SetGetaccuids() : CMla_request_Base
• SetGetblobinfo() : CID1server_request_Base
• SetGetbyid() : CTaxon1_resp_Base, CTaxon1_req_Base
• SetGetcde() : CTaxon1_resp_Base, CTaxon1_req_Base
• SetGetchildren() : CTaxon1_resp_Base, CTaxon1_req_Base
• SetGetdesignator() : CTaxon1_resp_Base, CTaxon1_req_Base
• SetGetdivs() : CTaxon1_resp_Base, CTaxon1_req_Base
• SetGetgcs() : CTaxon1_resp_Base, CTaxon1_req_Base
• SetGetgi() : CID1server_request_Base
• SetGetgihist() : CID1server_request_Base
• SetGetgirev() : CID1server_request_Base
• SetGetgistate() : CID1server_request_Base
• SetGetidbyorg() : CTaxon1_resp_Base, CTaxon1_req_Base
• SetGetlineage() : CTaxon1_resp_Base, CTaxon1_req_Base
• SetGetmle() : CMla_request_Base, CMla_back_Base
• SetGetmlepmid() : CMla_request_Base
• SetGetmleuid() : CMla_request_Base
• SetGetmlr() : CMla_back_Base
• SetGetmlrpmid() : CMla_request_Base
• SetGetmlruid() : CMla_request_Base
• SetGetmripmids() : CMla_request_Base
• SetGetmriuids() : CMla_request_Base
• SetGetorgmod() : CTaxon1_resp_Base, CTaxon1_req_Base
• SetGetorgnames() : CTaxon1_resp_Base, CTaxon1_req_Base
• SetGetorgprop() : CTaxon1_resp_Base, CTaxon1_req_Base
• SetGetpme() : CMla_back_Base
• SetGetpmids() : CMla_back_Base
• SetGetproptypes() : CTaxon1_resp_Base, CTaxon1_req_Base
• SetGetpub() : CMla_request_Base, CMla_back_Base
• SetGetpubpmid() : CMla_request_Base
• SetGetranks() : CTaxon1_resp_Base, CTaxon1_req_Base
• SetGetsefromgi() : CID1server_request_Base
• SetGetseqidsfromgi() : CID1server_request_Base
• SetGetsewithinfo() : CID1server_request_Base
• SetGettitle() : CMla_request_Base, CMla_back_Base
• SetGetuids() : CMla_back_Base
• SetGetunique() : CTaxon1_resp_Base, CTaxon1_req_Base
• SetGffForFlybase() : CFlatFileConfig
• SetGffGenerateIdTags() : CFlatFileConfig
• SetGffGTFCompat() : CFlatFileConfig
• SetGffGTFOnly() : CFlatFileConfig
• SetGffShowSeq() : CFlatFileConfig
• SetGi() : CTSeq_Base, CID2S_Gi_Ints_Base, CID2S_Gi_Interval_Base, CID2S_Chunk_Data_Base::C_Id, CID2S_Bioseq_Ids_Base::C_E, CSeq_id_Base, CPC_XRefData_Base, CMSPepHit_Base, CID1server_maxcomplex_Base, CID1blob_info_Base, CPrimarySequence_Base::C_Attlist, CComponent_Base::C_Attlist
• SetGi1() : CHG_Stats_Base
• SetGi2() : CHG_Stats_Base
• SetGi_interval() : CID2S_Seq_loc_Base
• SetGi_ints() : CID2S_Seq_loc_Base
• SetGi_range() : CID2S_Bioseq_Ids_Base::C_E
• SetGibb() : CFeat_id_Base
• SetGibbmt() : CSeq_id_Base
• SetGibbsq() : CSeq_id_Base
• SetGid() : CCdd_id_Base
• SetGihist() : CID1server_back_Base
• SetGiim() : CSeq_id_Base, CFeat_id_Base
• SetGIList() : CRemoteBlast
• SetGiList() : CSeqDBNegativeList
• SetGiListFile() : oligofar::CSeqVecProcessor
• SetGiListLimitation() : CSearchDatabase
• SetGirevhist() : CID1server_back_Base
• SetGistate() : CID1server_back_Base
• SetGLFont() : OpenGLRenderer
• SetGlFont() : CFontWindow
• SetGLFontFromRegistry() : Cn3DGLCanvas
• SetGlobal() : CGuiRegistry
• SetGlobal_style() : CCn3d_style_dictionary_Base
• SetGlobalAppState() : CDiagContext
• SetGlobalColorScheme() : StyleManager
• SetGlobalCopyHook() : CTypeInfo, CObjectTypeInfoCV, CObjectTypeInfoVI, CObjectTypeInfoMI, CObjectTypeInfo, CVariantInfo, CMemberInfo
• SetGlobalHook() : CHookData< Hook, Function >, CHookDataBase
• SetGloballyDisabled() : CNcbiTestApplication
• SetGloballySkipped() : CNcbiTestApplication
• SetGlobalOptimizations() : CTool_Base::C_Attlist
• SetGlobalReadHook() : CTypeInfo, CObjectTypeInfoCV, CObjectTypeInfoVI, CObjectTypeInfoMI, CObjectTypeInfo, CVariantInfo, CMemberInfo
• SetGlobalRenderingStyle() : StyleManager
• SetGlobals() : CVisualStudioProject_Base
• SetGlobalSettingStyle() : CSeqGraphicConfig
• SetGlobalSkipHook() : CTypeInfo, CObjectTypeInfoVI, CObjectTypeInfoMI, CObjectTypeInfo, CVariantInfo, CMemberInfo
• SetGlobalStyle() : StyleManager
• SetGlobalWriteHook() : CTypeInfo, CObjectTypeInfoCV, CObjectTypeInfoVI, CObjectTypeInfoMI, CObjectTypeInfo, CVariantInfo, CMemberInfo
• SetGlobalXFormObj() : CPageBuffers
• SetGotblobinfo() : CID1server_back_Base
• SetGotdeadseqentry() : CID1server_back_Base
• SetGotgi() : CID1server_back_Base
• SetGotseqentry() : CID1server_back_Base
• SetGotsewithinfo() : CID1server_back_Base
• SetGpipe() : CSeq_id_Base
• SetGpipeOrgAbbr() : CExchangeSet_Base::C_SourceDatabase::C_Attlist
• SetGradNumber() : CScoreCache
• SetGrant_number() : CPC_AssayDescription_Base
• SetGraph() : CID2S_Seq_annot_Info_Base, CSeq_graph_Base, CSeqEdit_Cmd_ReplaceAnnot_Base::C_Data, CSeqEdit_Cmd_RemoveAnnot_Base::C_Data, CSeqEdit_Cmd_AddAnnot_Base::C_Data, CSeqEdit_Cmd_AddAnnot_Base::C_Search_param::C_Obj, CSeq_annot_Base::C_Data
• SetGraphBarHeight() : CAlnGraphic
• SetGraphColor() : CHitMatrixRenderer
• SetGraphRanges() : CAnnotMapping_Info
• SetGraphs() : CHitMatrixRenderer
• SetGrayscale() : CPrintOptions
• SetGreen() : CImage, CCn3d_color_Base, CRgbaColor
• SetGrid_corners() : CDensity_coordinates_Base
• SetGrid_steps_x() : CDensity_coordinates_Base
• SetGrid_steps_y() : CDensity_coordinates_Base
• SetGrid_steps_z() : CDensity_coordinates_Base
• SetGroup() : CArgDesc_Flag, CArgDescOptional, CMappingRange, CGlyphContainer, CRnaCdsGroup, CArgDesc
• SetGroupkey() : CFeatDispGroup_Base
• SetGroupLabel() : CAssembly_Base::C_Attlist
• SetGroupname() : CFeatDispGroup_Base
• SetGroups() : CEUtils_IdGroupSet, CFeatDefGroupSet_Base
• SetGroupTerm() : CComponent_Base::C_Attlist
• SetGTFVer2() : CGffExportParams
• SetGTIntronCost() : CProSplignScoring
• SetGuideFile() : oligofar::AOutputFormatter
• SetH() : CPssmFinalData_Base, CPssm, CBlast4_ka_block_Base
• SetHad_punct() : CPIR_block_Base
• SetHairlineOption() : CSeqGraphicConfig
• SetHandle() : CSs_Base::C_Attlist, CAssay_Base::C_Attlist, CODBC_Reporter
• SetHandlerStack() : CODBC_Reporter
• SetHandleType() : CODBC_Reporter
• SetHapCount() : CAssembly_Base::C_SnpStat::C_Attlist
• SetHas_zero() : CNum_cont_Base
• SetHasFailed() : impl::CBaseCmd
• SetHash() : CBDB_RawFile, CBDB_IdBlobFile
• SetHashBits() : CHashParam
• SetHashDeletions() : CHashParam
• SetHashFillFactor() : CBDB_RawFile
• SetHashIndelPosition() : CHashParam
• SetHashIndels() : CHashParam
• SetHashInsertions() : CHashParam
• SetHashMaxAmb() : CHashParam
• SetHashMismatches() : CHashParam
• SetHashNelem() : CBDB_RawFile
• SetHashParam() : CPassParam
• SetHashType() : oligofar::COligoFarApp
• SetHashWordBitmask() : oligofar::CQueryHash
• SetHasSummary() : CMim_entry_Base
• SetHasSynopsis() : CMim_entry_Base
• SetHaveMap() : CSeqDB_ColumnEntry
• SetHaveSplices() : oligofar::CQueryHash
• SetHaveTypeInfo() : CClassTypeStrings
• SetHaveUserClass() : CClassTypeStrings
• SetHeader() : CSoapEnvelope_Base, CSeqTable_column_Base, CPrintOptions
• SetHeaderFileName() : CTool_Base::C_Attlist
• SetHeaderOffset() : CPrintOptions
• SetHeaderValue() : CCgiResponse
• SetHeading() : CGene_commentary_Base
• SetHeavy_atom() : CPC_Count_Base
• SetHeight() : CCdd_Viewer_Rect_Base, CHTMLNode, CSeqGlyph, CGlViewport
• SetHeights() : CSplitter
• SetHelix_objects() : CCn3d_style_settings_Base
• SetHelix_radius() : CCn3d_style_settings_Base
• SetHelp_file() : CPluginInfo_Base
• SetHelpDocsUrl() : CVecscreen
• SetHelpId() : CUIObject
• SetHet() : CSeqFeatData_Base, CSeqdesc_Base, CRs_Base, CRs_Base::C_Het
• SetHeterogens() : CCn3d_style_settings_Base
• SetHg_id() : CHG_Entry_Base, CHG_CommentarySet_Base, CHG_Alignment_Base
• SetHgvs() : CRs_Base
• SetHidden() : CDockLayoutTree::CNode, CPluginArg_Base
• SetHiddenFlag() : CFormArgDesc
• SetHideCDDFeatures() : CFlatFileConfig
• SetHideCDSProdFeatures() : CFlatFileConfig
• SetHideExonFeatures() : CFlatFileConfig
• SetHideGapFeatures() : CFlatFileConfig
• SetHideGeneRIFs() : CFlatFileConfig
• SetHideImpFeatures() : CFlatFileConfig
• SetHideIntronFeatures() : CFlatFileConfig
• SetHideLabel() : CSeqGlyph, CFeatGlyph
• SetHideMiscFeatures() : CFlatFileConfig
• SetHideRemoteImpFeatures() : CFlatFileConfig
• SetHideSNPFeatures() : CFlatFileConfig
• SetHideSourceFeatures() : CFlatFileConfig
• SetHierarchy_avail() : CEntrez2_field_info_Base
• SetHighlightedItem() : CTextPanelContext
• SetHighlights() : Messenger
• SetHint() : CUIObject
• SetHintListener() : CMainFrame
• SetHints() : CBulkInsert, CDB_BCPInCmd, impl::CBaseCmd, CTL_BCPInCmd, IBulkInsert
• SetHist() : CSeqEdit_Cmd_ChangeSeqAttr_Base::C_Data, CSeq_inst_Base, CID1Seq_hist_Base
• SetHistogram() : CPaneContentConf
• SetHistogramCutoff() : CSeqGraphicConfig
• SetHistory() : CEPostResult_Base, CBiostruc_descr_Base, CImprint_Base, CGBProject_ver2_Base, CGBProject_Base
• SetHistSettings() : CHistParamsManager
• SetHit_frame() : CHsp_Base
• SetHit_from() : CHsp_Base
• SetHit_to() : CHsp_Base
• SetHitID() : CRequestContext
• SetHitInfo() : CMSSpectrumMatch
• SetHitlist_size() : CBlast4_common_options_Base
• SetHitlistlen() : CMSSearchSettings_Base
• SetHitlistSize() : CBlastOptionsLocal, CSimpleB2SWrapper, CBlastOptionsHandle, CBlastOptions
• SetHits() : CMSSpectrumMatch, CMSHitSet_Base, CIteration_Base
• SetHitSavingOptionsDefaults() : CTBlastxOptionsHandle, CTBlastnOptionsHandle, CBlastxOptionsHandle, CBlastRPSOptionsHandle, CBlastProteinOptionsHandle, CBlastOptionsHandle, CBlastNucleotideOptionsHandle
• SetHitsets() : CMSResponse_Base
• setHitsNeeded() : CDUpdater
• SetHitsOnly() : CElementaryMatching
• SetHIVCloneIsolateRule() : CAutoDefModifierCombo
• SetHMMParameters() : CGnomonAnnotator_Base
• SetHolding() : CELink_Request
• SetHomology() : CEntrezgene_Base
• SetHook() : CStreamObjectPathHook< THook >, CStreamPathHook< TInfo, THook >, CStreamPathHookBase, CPathHook, CLocalHookSet< Hook >, CLocalHookSetBase
• SetHorizontal() : CSeqGraphicPane, CSeqGraphicWidget, CSeqGraphicRenderer, CRuler, CLayoutObject, CAxisRenderer
• SetHorizontalGridColor() : CSeqGraphicConfig
• SetHorz() : CGlRect< T >
• SetHorzColor() : CRegularGridRenderer
• SetHost() : CPRF_ExtraSrc_Base, CPIR_block_Base, CTextSelHandler, CSeqTextWidget, CSequenceTextGraph, CSeqGraphicRenderer, CLayoutTrack, CLayoutTrackHandler, IPhyloTreeRenderer, CHitMatrixGraph, CTooltipHandler, CTooltip, CSeqMarkHandler, CMouseZoomHandler, CMinimapHandler, CLinearSelHandler, CLegendHandler, CGraphContainer, CBookmarksHandler, IAlignRow, CAlnMultiHeaderHandler, CAlnVecRow, CAlignMarkHandler, CDBDefaultConnParams, CDBConnParamsBase, impl::CDBConnParamsBase, CUrl
• SetHostIP() : CDiagContext
• SetHostName() : I_DriverContext, impl::CDriverContext
• SetHostname() : CDiagContext
• SetHosts() : CNetSchedule_AccessList
• SetHour() : CDate_std_Base, CTime
• SetHPPDir() : CCodeGenerator
• SetHref() : CHTML_area, CHTML_a
• SetHseq() : CHsp_Base
• SetHsp_len() : CStatistics_Base
• SetHsps() : CHit_Base
• SetHTML() : CJobResultsDlg
• SetHTTPStatus() : CCgiApplication
• SetHUngapped() : CPssmFinalData_Base, CPssm
• SetHup() : CSubmit_block_Base
• SetHybrid() : COrgName_Base::C_Name
• SetHydrogens_on() : CCn3d_style_settings_Base
• SetHypertext() : CHG_Link_Base
• SetIcon() : CTextTableModel, CMapItem
• SetIcon_info() : CPluginInfo_Base
• SetIconAlias() : CUIObject
• SetIconIndex() : CExplorerItem
• SetIconSignSize() : CSeqGraphicConfig
• SetIconSize() : CSeqGraphicConfig
• SetIconUrl() : CProvider_Base, CLink_Base, CProvider_Base, CObjUrl_Base
• SetId() : CQueueWorkerNodeList, CJob, CLockVectorGuard< TLockVect >, CNCBI_Sample_ASN_Type_Base, CDocSum_Base, CProvider_Base, CLink_Base, CIdUrlSet_Base, CIdList_Base, CIdLinkSet_Base, CIdCheckList_Base::C_II::C_E_II, CBioseq_set_Info, CBioseq_set_EditHandle, CSeqTable_single_data_Base, CSeqTable_multi_data_Base, CID2S_Chunk_Info_Base, CID2S_Chunk_Data_Base, CBioseq_set_Base, CSeq_point_Base, CSeq_loc, CSeq_interval_Base, CPacked_seqpnt_Base, CGiimport_id_Base, CSeqFeatXref_Base, CSeq_feat_Base, CGenetic_code_Base::C_E, CSeqEdit_Cmd_SetDescr_Base, CSeqEdit_Cmd_ResetSetAttr_Base, CSeqEdit_Cmd_ResetSeqEntry_Base, CSeqEdit_Cmd_ResetSeqAttr_Base, CSeqEdit_Cmd_ResetIds_Base, CSeqEdit_Cmd_ResetDescr_Base, CSeqEdit_Cmd_ReplaceAnnot_Base, CSeqEdit_Cmd_RemoveSeqEntry_Base, CSeqEdit_Cmd_RemoveId_Base, CSeqEdit_Cmd_RemoveDesc_Base, CSeqEdit_Cmd_RemoveAnnot_Base, CSeqEdit_Cmd_ChangeSetAttr_Base, CSeqEdit_Cmd_ChangeSetAttr_Base::C_Data, CSeqEdit_Cmd_ChangeSeqAttr_Base, CSeqEdit_Cmd_AttachSet_Base, CSeqEdit_Cmd_AttachSeqEntry_Base, CSeqEdit_Cmd_AttachSeq_Base, CSeqEdit_Cmd_AttachAnnot_Base, CSeqEdit_Cmd_AddId_Base, CSeqEdit_Cmd_AddDescr_Base, CSeqEdit_Cmd_AddDesc_Base, CSeqEdit_Cmd_AddAnnot_Base, CEMBL_xref_Base, CSeq_align_Base, CScore_Base, CSeq_annot_Base, CBioseq_Base, CProject_descr_Base, CPC_ID_Base, CPC_CompoundType_Base, CPC_Compound_Base, CPC_AssayDRAttr_Base, CTransform_Base, CBiostruc_feature_set_Base, CBiostruc_feature_Base, CModel_coordinate_set_Base, CBiostruc_model_Base, CResidue_graph_Base, CResidue_Base, CMolecule_graph_Base, CBiostruc_set_Base, CBiostruc_residue_graph_set_Base, CBiostruc_replace_Base, CBiostruc_annot_set_Base, CBiostruc_Base, CAtom_Base, CINSDXref_Base, CHG_Node_id_Base, CHG_Node_Base, CGC_Genome_Base, CGC_Assembly_Base, CObject_id_Base, CGBXref_Base, CAssay_Base::C_Taxonomy::C_Attlist, CAssay_Base::C_Method::C_EMethod::C_Attlist, CCn3d_style_table_item_Base, CCdd_tree_Base, CCdd_Base, CHit_Base, CBlast4_seq_part_data_Base, CNode_Base, CFeatureDescr_Base, CId_pat_Base, CHTMLNode, CTempTrackProxy, CLayoutTrack, IPhyNode, CBLAST_Dlg_Item, CProjectItem_Base, CProjectItem_Base::C_Item, CProjectHistoryItem_Base, CMessageHistoryInfo_Base, CCgiSession, CScoreVector< Key, Score >, CRawScoreVector< Key, Score >, CPhyNodeData, BioTreeBaseNode< TNodeData, TNodeFeatures >, CSpectrum_Base::C_Attlist, CSourceFile_Base::C_Attlist, CSoftware_Base::C_Attlist, CSample_Base::C_Attlist, CRun_Base::C_Attlist, CReferenceableParamGroup_Base::C_Attlist, CMzML_Base::C_Attlist, CInstrumentConfiguration_Base::C_Attlist, CDataProcessing_Base::C_Attlist, CCv_Base::C_Attlist, CChromatogram_Base::C_Attlist, CAcquisitionSettings_Base::C_Attlist, CSupDataArrayBinary_Base::C_Attlist, CSupDataArray_Base::C_Attlist, CSpectrum_Base::C_Attlist, CAlignShadow
• SetID() : CGeneModel
• setId() : Block
• SetId2ItemMap() : CNRCriteria
• SetId4gi() : CTaxon1_resp_Base, CTaxon1_req_Base
• SetId_type() : CHG_Node_id_Base
• SetIdCache() : CCacheHolder
• SetIdCheckList() : CLinkSet_Base::C_Data
• SetIdent() : CActiveObject, CBlast4_request_Base
• SetIdentifier() : CPssm_Base
• SetIdentities() : oligofar::TAlignerBase< CQuery, CSubject >
• SetIdentity() : CHsp_Base, CBlastTabular
• SetIdentityScore() : oligofar::CScoring
• SetIDGenerator() : CFastaReader
• SetIdler() : CIdlerWrapper
• SetIdLinkSet() : CIdCheckList_Base::C_II::C_E_II
• SetIdList() : CCachedSeqDataForRemote, CESearchResult_Base::C_Data::C_Info::C_Content, CLinkSet_Base::C_Data::C_Links, CSeqIdListSet
• SetIdnum() : CMedline_entry_Base
• SetIDs() : CFastaReader
• SetIds() : CEUtils_IdGroup, CSeq_feat_Base, CPDB_replace_Base, CStd_seg_Base, CPacked_seg_Base, CDense_seg_Base, CDense_diag_Base, CSeq_hist_rec_Base, CSeq_annot_Base::C_Data, CAlign_def_Base, CMSSpectrum_Base, CMSHitSet_Base, CMedline_field_Base, CID2_Reply_Get_Blob_Seq_ids_Base, CID1server_back_Base, CEntrez2_link_set_Base, CEntrez2_boolean_element_Base, CReject_id_Base, CCit_art_Base
• SetIdUrlList() : CLinkSet_Base::C_Data
• SetIdUrlSet() : CIdUrlList_Base
• SetIdx() : mu::ParserToken< TBase, TString >
• SetIgnoreAllDefaultLibraries() : CTool_Base::C_Attlist
• SetIgnoreDefaultLibraryNames() : CTool_Base::C_Attlist
• SetIgnoreStandardIncludePath() : CTool_Base::C_Attlist
• SetIgnoreStrand() : SAnnotSelector
• SetIgnoreUnresolved() : SAnnotSelector
• SetIgnoreUnsupportedOptions() : CBlastOptionsBuilder
• SetII() : CIdCheckList_Base, CIdCheckList_Base::C_II
• SetImage() : CTexWindow, CGlTexture
• SetImageAlias() : CMenuItem
• SetImageFormat() : CGuideTree
• SetImageHeight() : CGuideTree
• SetImagePath() : CVecscreen, CShowBlastDefline, CAlnGraphic
• SetImageWidth() : CGuideTree
• SetImax() : CPC_ResultType_Base::C_Constraints
• SetImeth() : CSP_block_Base
• SetImin() : CPC_ResultType_Base::C_Constraints
• SetImmonium() : CMSIon_Base
• SetImp() : CSeqFeatData_Base, CCit_sub_Base, CCit_jour_Base, CCit_book_Base
• SetImpl() : CSeqDBImplFlush
• SetImplementation() : CPC_Urn_Base
• SetImplicit() : CClassTypeInfo
• SetImplOwnership() : CCgiSessionParameters
• SetImportLibrary() : CTool_Base::C_Attlist
• SetImports() : CBundle_seqs_aligns_Base
• SetIN_Context() : CQueryParserEnv
• SetIn_exon() : CMarkov_chain_array_Base
• SetIn_intron() : CMarkov_chain_array_Base
• SetIn_reply_to() : CPluginMessage_Base
• SetInChoice() : CDataType
• SetInclude() : CParameters_Base
• SetIncluded() : CMim_entry_Base
• SetIncludeLog() : WizardPage2, CFeedbackReport
• SetIncluderequest() : CMSOutFile_Base
• SetIncludes() : CPIR_block_Base
• SetIncludeSysInfo() : WizardPage3
• setInclusionThreshold() : ResidueProfiles
• SetInclusionThreshold() : CBlastOptionsLocal, CPSIBlastOptionsHandle, CBlastOptions
• SetInClustAlnMethod() : CMultiAlignerOptions
• SetIncrement() : oligofar::CProgressIndicator
• SetIndelPosition() : oligofar::CQueryHash
• SetIndels() : oligofar::CHashPopulator
• SetIndent() : CFlatItemFormatter, CLayoutTrack
• SetIndex() : CItemsInfo::CIterator, CChoiceTypeInfo, CSeqEdit_Cmd_AttachSeqEntry_Base, CSparse_seg_ext_Base, CMSMZHit_Base, CMim_author_Base, CSpectrum_Base::C_Attlist, CChromatogram_Base::C_Attlist
• SetIndexBits() : oligofar::CWordHash, oligofar::CQueryHash
• setIndexByConsensus() : ColumnResidueProfile
• SetIndexed() : SAnnotObjectsIndex, CSupDataArray_Base::C_Attlist
• SetIndexEntry() : COrgRefCache
• SetIndexes() : CSeqTable_sparse_index_Base, CCommonString_table_Base, CCommonBytes_table_Base
• SetIndexParams() : COffsetList
• setIndexSequence() : UnalignedSegReader
• SetIndirect() : CBiostruc_feature_Base::C_Location
• SetIndividual() : CPC_Source_Base
• SetInfile() : CMSInFile_Base
• SetInfiles() : CMSSearchSettings_Base
• SetInfiletype() : CMSInFile_Base
• SetInfinitLoopTime() : CWNJobsWatcher
• SetInfo() : CESearchResult_Base::C_Data, CLinkSetDb_Base::C_Data, CIdUrlSet_Base::C_Data, CID2S_Bioseqs_Info_Base, CWorkspaceFolder_Base, CProjectFolder_Base, CPluginReplyAction_Base, CPluginLibInfo_Base, CPluginInfo
• SetInfoOnly() : CAutoDefFeatureClause_Base
• SetInformationContent() : CPssmIntermediateData_Base
• SetInherited() : CFeatConfigValues< V >
• SetInit() : CTaxon1_resp_Base, CTaxon1_req_Base, CMla_request_Base, CMla_back_Base, CID2_Request_Base::C_Request, CID2_Reply_Base::C_Reply, CID1server_request_Base, CID1server_back_Base, CGBenchServiceRequest_Base, CGBenchServiceReply_Base
• SetInitialAlignment() : MSAAInterface, BMARefinerInterface
• SetInitialized() : impl::CCachedRowInfo
• SetInitials() : CName_std_Base
• SetInitialState() : UpdateViewer
• SetInitialValue() : oligofar::CProgressIndicator
• SetInitialWordOptionsDefaults() : CBlastRPSOptionsHandle, CBlastProteinOptionsHandle, CBlastOptionsHandle, CBlastNucleotideOptionsHandle
• SetInitIfDirty() : CBDB_Cache
• SetInitp() : CIntron_params_Base, CIntergenic_params_Base
• SetInittype() : CTxinit_Base
• SetInlineFunctionExpansion() : CTool_Base::C_Attlist
• SetInput() : CGenBankLoadOptionPanel, CJob, CNetBLASTLoadOptionPanel
• SetInput_file() : CPluginValue_Base
• SetInputChunk() : oligofar::CSeqScanner
• SetInputFile() : CPluginArg
• SetInputObject() : CSeqGraphicPane, CSeqGraphicWidget, CSeqGraphicRenderer, CFeaturePanel
• SetInputObjects() : CBLASTToolManagerBase, IUIAlgoToolManager, CRunToolDlg, COpenViewManager, IOpenViewManager, COpenViewDlg, CAlgoToolManagerBase
• SetInputPssm() : CTblastnAppArgs, CPsiBlastAppArgs, CPsiBlastArgs
• setinputsizes() : python::CCursor
• SetInputStream() : CCgiRequest, CBlastAppArgs, CStdCmdLineArgs
• SetInsertions() : oligofar::TAlignerBase< CQuery, CSubject >
• SetInSet() : CDataType
• SetInst() : CBioseq_Info, CBioseq_EditHandle, CSeqEdit_Cmd_ChangeSeqAttr_Base::C_Data, CBioseq_Base
• SetInst_Ext() : CBioseq_Info, CBioseq_EditHandle
• SetInst_Fuzz() : CBioseq_Info, CBioseq_EditHandle
• SetInst_Hist() : CBioseq_Info, CBioseq_EditHandle
• SetInst_Hist_Assembly() : CBioseq_Info
• SetInst_Hist_Deleted() : CBioseq_Info
• SetInst_Hist_Replaced_by() : CBioseq_Info
• SetInst_Hist_Replaces() : CBioseq_Info
• SetInst_Length() : CBioseq_Info, CBioseq_EditHandle
• SetInst_Mol() : CBioseq_Info, CBioseq_EditHandle
• SetInst_Repr() : CBioseq_Info, CBioseq_EditHandle
• SetInst_Seq_data() : CBioseq_Info, CBioseq_EditHandle
• SetInst_Strand() : CBioseq_Info, CBioseq_EditHandle
• SetInst_Topology() : CBioseq_Info, CBioseq_EditHandle
• SetInstitution() : CContact_Base
• SetInstrument() : CDescription_Base
• SetInstrumentConfiguration() : CInstrumentConfigurationList_Base
• SetInstrumentConfigurationList() : CMzML_Base
• SetInstrumentConfigurationRef() : CScan_Base::C_Attlist, CAcquisitionSettings_Base::C_Attlist
• SetInstrumentName() : CInstrument_Base
• SetInt() : CSeqTableSetAnyFeatField, CSeqTableSetAnyLocField, CSeqTableSetExtType, CSeqTableSetDbxref, CSeqTableSetExt, CSeqTableSetLocFuzzToLim, CSeqTableSetLocFuzzFromLim, CSeqTableSetFeatField, CSeqTableSetLocField, CT3StatusFlags_Base::C_Value, CSeqTable_single_data_Base, CSeqTable_multi_data_Base, CSeq_graph_Base::C_Graph, CSeq_loc_Base, CScore_Base::C_Value, CUser_field_Base::C_Data, CBDB_FieldSimpleFloat< T >, CBDB_FieldSimpleInt< T >, IBDB_FieldConvert, CSupDataArray_Base::C_FDIBSTU
• SetInt4Functions() : CPrimitiveTypeInfoIntFunctions< T >, CPrimitiveTypeInfoInt
• SetInt8Functions() : CPrimitiveTypeInfoIntFunctions< T >, CPrimitiveTypeInfoInt
• SetInteger() : CBlast4_value_Base, CObjectList, CPluginValue_Base, CPluginValue, CPluginArg, IntegerSpinCtrl
• SetInteger_list() : CBlast4_value_Base
• SetIntegerMode() : CRegularGridGen, CGraphPanel
• SetIntenArrayBinary() : CSpectrum_Base
• SetIntensity() : CMSBasicPeak, CLadder
• SetInter_molecule_bonds() : CBiostruc_graph_Base
• SetInter_residue_bonds() : CMolecule_graph_Base
• SetInterbp() : CINSDInterval_Base, CGBInterval_Base
• SetInterfaceStarted() : CThreadPool_Impl
• SetIntergenic() : CGnomon_param_Base::C_Param
• SetIntermediateData() : CPssm_Base
• SetIntermediateDirectory() : CTool_Base::C_Attlist, CConfiguration_Base::C_Attlist
• SetInternal() : pythonpp::bind::CObject< T >, pythonpp::bind::CString, pythonpp::bind::CLong, pythonpp::bind::CBase, CMSIon_Base
• SetInternal_exon_length() : CExon_params_Base
• SetInternal_exon_phase_probabilities() : CExon_params_Base
• SetInterruptCallback() : CMultiAligner, CBl2Seq
• SetInterruptOnSignal() : CSocketAPI, CSocket
• SetIntersectLimit() : CChainer
• SetInterval() : CSeqTable_single_data_Base, CSeqTable_multi_data_Base, CSeqLocInfo, CResidue_pntrs_Base
• SetIntervals() : CINSDFeature_Base, CGBFeature_Base, CFeatGlyph, CClonePlacementGlyph
• SetIntervalSizes() : CPssmIntermediateData_Base
• SetIntervalTree() : CMSPeakSet
• SetIntron() : CGnomon_param_Base::C_Param
• SetIntronExtensionCost() : CProSplignScaledScoring
• SetIntronMinSize() : CSplicedAligner
• SetInts() : CID2S_Seq_id_Ints_Base, CID2S_Gi_Ints_Base, CUser_field_Base::C_Data
• SetIntvalue() : CBlockProperty_Base
• SetInvalid() : CCgiCookie
• SetInvalidIdList() : CEPostResult_Base
• SetInvertedIntronExtensionCost() : CProSplignScoring
• SetIO() : CFeatureCreateDialog
• SetIOFunctions() : CPrimitiveTypeFunctions< T >, CTimeFunctions, CPrimitiveTypeInfo
• SetIon() : CMSMZHit_Base
• SetIon_labels() : CCn3d_style_settings_Base
• SetIonizable_proton() : CAtom_Base
• SetIons() : CSearch< LEGACY, NHITS >
• SetIonSelection() : CPrecursor_Base
• SetIonSeries() : CMSBasicMatchedPeak
• SetIonSeriesMatchMap() : CMSSpectrumMatch
• SetIonstosearch() : CMSSearchSettings_Base
• SetIrange() : CPC_ResultType_Base::C_Constraints
• SetIrrelevance() : CCompareFeats
• SetIs_ambiguous() : CEntrez2_hier_node_Base
• SetIs_corr() : CAuthor_Base
• SetIs_date() : CEntrez2_field_info_Base
• SetIs_focus() : CBioSource_Base
• SetIs_leaf_node() : CEntrez2_term_Base
• SetIs_mlp_late_stage() : CPC_AssayDescription_Base
• SetIs_numerical() : CEntrez2_field_info_Base
• SetIs_on() : CCn3d_user_annotation_Base, CCn3d_general_style_Base
• SetIs_panel() : CPC_AssayDescription_Base
• SetIs_rangable() : CEntrez2_field_info_Base
• SetIs_species_level() : CTaxon2_data_Base, CTaxon1_data_Base
• SetIs_truncatable() : CEntrez2_field_info_Base
• SetIs_uncultured() : CTaxon2_data_Base
• SetIsAlias() : CDataType
• SetIsAnnotated() : CSequence_tree_Base, CSeqTree_node_Base
• SetIsbn() : CTitle_Base::C_E
• SetIscale() : CMSSpectrum_Base
• SetIscomp() : CINSDInterval_Base, CGBInterval_Base
• SetIset() : CPC_ResultType_Base::C_Constraints
• SetIsFixed() : CMSModInfo
• SetIso_jta() : CTitle_Base::C_E
• SetIsolationWindow() : CPrecursor_Base
• SetIsotope() : CPC_Atoms_Base, CMSIon_Base
• SetIsotope_atom() : CPC_Count_Base
• SetIsotropic() : CAtomic_temperature_factors_Base
• SetIsProtein() : CPssm_Base
• SetIssn() : CTitle_Base::C_E
• SetIssue() : CImprint_Base, CCit_gen_Base
• SetIStreamCacheSize() : CLDS_DataLoader
• SetItem() : pythonpp::CList, pythonpp::CTuple, pythonpp::CSequnceHelper< T >, pythonpp::CDict, pythonpp::CDictHelper< T >, CItem_Base, CItem_Base::C_E_Item, CDocSum_Base, CSelectionHelper, CViewDescriptor_Base::C_Data, CProjectItem_Base, CDataHandle_Base
• SetItemCount() : CPager
• SetItemFast() : pythonpp::CList, pythonpp::CTuple
• SetItemInfo() : CConstTreeLevelIteratorMany< ChildIterator >, CTreeLevelIteratorMany< ChildIterator >, CConstTreeLevelIteratorOne, CTreeLevelIteratorOne, CTreeLevelIterator, CConstTreeLevelIterator
• SetItems() : CTextViewRetrieveResult, CwxScoreDlg, CwxHistogramDlg, CSelListModelImpl< Item >, CMRUList< T >, CProjectFolder_Base, CItemSelectionPanel, CDataLoadingAppJob, CAppExplorerData
• SetItemsProvider() : CAutoCompleteCombo
• SetItemState() : CSelectionControl
• SetItemTypeLabel() : CItemSelectionPanel
• SetIter_num() : CIteration_Base
• SetIterate() : CMultiAlignerOptions
• SetIterationRange() : CSeqDBImpl, CSeqDB
• SetIterations() : CBlastOutput_Base
• SetIterative() : CSearch< LEGACY, NHITS >
• SetIterativesettings() : CMSSearchSettings_Base
• SetIteratorFunctions() : CStlClassInfoFunctionsI_set< Container >, CStlClassInfoFunctionsI< Container >, CStlClassInfoFunctionsCI< Container >, CContainerTypeInfo
• SetIupac_code() : CResidue_graph_Base, CAtom_Base
• SetIupacaa() : CTrna_ext_Base::C_Aa, CSeq_data_Base
• SetIupacCoding() : CSeqVector
• SetIupacna() : CSeq_data_Base
• SetIval() : CPC_InfoData_Base::C_Value, CPC_AssayData_Base::C_Value
• SetIval1() : CTaxon1_info_Base
• SetIval2() : CTaxon1_info_Base
• SetIvec() : CPC_InfoData_Base::C_Value
• SetJobAffinity() : CGridJobBatchSubmitter, CGridJobSubmitter
• SetJobInput() : CGridCgiContext, CGridJobBatchSubmitter, CGridJobSubmitter
• SetJobInputBlobSize() : CWorkerNodeJobContext
• SetJobKey() : CGridCgiContext
• SetJobListener() : CSGGenBankDS
• SetJobMask() : CGridJobBatchSubmitter, CGridJobSubmitter
• SetJobOutput() : CGridCgiContext, CWorkerNodeJobContext
• SetJobProgressMessage() : CGridCgiContext
• SetJobRetCode() : CWorkerNodeJobContext
• SetJobRunTimeout() : CGridThreadContext, CWorkerNodeJobContext
• SetJobTags() : CGridJobBatchSubmitter, CGridJobSubmitter
• SetJobTitle() : CBLASTSearchParamsPanel
• SetJoin() : CT3Request_Base
• SetJoinTerminal() : CTaxon1Node
• SetJournal() : CPub_set_Base, CPub_Base, CMim_reference_Base, CINSDReference_Base, CGBReference_Base, CCit_gen_Base, CCit_art_Base::C_From
• SetJta() : CTitle_Base::C_E
• SetJump() : CBiostruc_script_step_Base
• SetK() : CBlast4_ka_block_Base
• SetKa() : CHG_Stats_Base
• SetKa_blocks() : CBlast4_get_search_results_reply_Base
• SetKappa() : CPssmFinalData_Base, CPssm, CStatistics_Base
• SetKappaUngapped() : CPssmFinalData_Base, CPssm
• SetKeep3UTRs() : CAutoDef
• SetKeep5UTRs() : CAutoDef
• SetKeepAfterSemicolon() : CAutoDefModifierCombo
• SetKeepCountryText() : CAutoDefModifierCombo
• SetKeepExons() : CAutoDef
• SetKeepHit() : CHitList
• SetKeepIntrons() : CAutoDef
• SetKeepLTRs() : CAutoDef
• SetKeepParen() : CAutoDefModifierCombo
• SetKeepPromoters() : CAutoDef
• SetKey() : Ctbl_seg, CAnnotObject_Info, CImp_feat_Base, CMim_index_term_Base, CINSDFeature_Base, CGBFeature_Base, CEntrez2_reply_Base, CEntrez2_boolean_element_Base, CTrackProxy, CSimpleBlobStore
• SetKeyboardHook() : CDockManager
• SetKeyId() : CStlTwoArgsTemplate
• SetKeys() : CAnnotObject_Info
• SetKeyword() : CVisualStudioProject_Base::C_Attlist
• SetKeywords() : CSP_block_Base, CPRF_block_Base, CPIR_block_Base, CGB_block_Base, CEMBL_block_Base, CINSDSeq_Base, CGBSeq_Base
• SetKimura() : DM_Identities
• SetKmerAlphabet() : CMultiAlignerOptions
• SetKmerDistMeasure() : CMultiAlignerOptions
• SetKmerLength() : CMultiAlignerOptions, CSparseKmerCounts
• SetKnc() : CHG_Stats_Base
• SetKnr() : CHG_Stats_Base
• SetKs() : CHG_Stats_Base
• SetL() : CLength_distribution_params_Base
• SetLabel() : CTestCmdUI, CPC_Urn_Base, CPC_Atoms_Base, CPrintFormat_Base, CMim_text_Base, CUser_field_Base, CGene_commentary_Base, CwxLabelEditDlg, CPhyloTreeNode, CPhyNewickNode, CUIObject, CMenuItem, CExtensionPoint, ICmdUI, CBookmark, CAlignmentSmear, CProjectItem_Base, CProjectHistoryItem_Base, CPluginMRUEntry_Base, CDataHandleAction_Base, CDataHandle_Base, CFormArgDesc, CExplorerItem, CPhyNodeData
• SetLabelColor() : IPhyGraphicsNode
• SetLabelFont() : CSeqGraphicConfig
• SetLabelFormat() : CPhyloTreeScheme, CPhyloTreeLabel
• SetLabelfrom() : CPrintTemplate_Base
• SetLabelOrientation() : CRuler
• SetLabelPos() : CSeqGraphicConfig
• SetLabels() : CDistanceMatrix_Base
• SetLabelStyle() : StyleDialog
• SetLabelType() : CGuideTreeCalc
• SetLabelVisibility() : CPhyloTreeScheme
• SetLabove() : CPC_StereoSquarePlanar_Base, CPC_StereoPentagonalBiPyramid_Base, CPC_StereoOctahedral_Base
• SetLadderCalc() : CSearch< LEGACY, NHITS >
• SetLadderContainer() : CSearch< LEGACY, NHITS >
• SetLadderMap() : CLadderContainer
• SetLadderNumber() : CLadder
• SetLambda() : CPssmFinalData_Base, CPssm, CStatistics_Base, CBlast4_ka_block_Base
• SetLambdaUngapped() : CPssmFinalData_Base, CPssm
• SetLanguage() : CImprint_Base
• SetLargeAddressAware() : CTool_Base::C_Attlist
• SetLast() : CName_std_Base
• SetLast_exon_length() : CExon_params_Base
• SetLast_name() : CContact_info_Base
• SetLast_updated() : CBlast4_database_info_Base
• SetLastError() : CTaxon3, CTaxon1
• SetLastUpdate() : CDbInfo_Base
• SetLatestGeneRIFs() : CFlatFileConfig
• SetLayout() : CSeqGraphicConfig, CLayoutConfig, CFeatureTrack, CGlCamera, CLayout, CGBWorkspace_Base, CGraphPanel
• SetLayoutDirection() : CThemeConfigPanel2
• SetLayoutPolicy() : CLayoutGroup, CGlyphContainer, CRnaCdsGroup
• SetLbelow() : CPC_StereoSquarePlanar_Base, CPC_StereoPentagonalBiPyramid_Base, CPC_StereoOctahedral_Base
• SetLbl() : CFeatureCreateDialog
• SetLbottom() : CPC_StereoPlanar_Base
• SetLeaf() : CPriorityNode
• SetLeafLabels() : CTreeBuilderParams
• SetLeavesNmb() : CPhyTreeNode
• SetLeavesNmbEx() : CPhyTreeNode
• SetLeft() : CPC_StereoPlanar_Base, CPC_StereoPentagonalBiPyramid_Base, CCdd_Viewer_Rect_Base, CSeqGlyph, CGlRect< T >
• SetLeftContigNeighborPos() : CMapLoc_Base::C_Attlist
• SetLeftFlankNeighborPos() : CMapLoc_Base::C_Attlist
• SetLeftOf() : CSeq_point
• SetLeftPlane() : CGlCamera
• SetLegacyStringsCheck() : CBDB_BufferManager, CBDB_File
• SetLen() : CDense_diag_Base, CHit_Base
• SetLength() : CCachedSeqDataForRemote, COpenRange< Position >, CAlignRange< Position >, CObjectIStream::CharBlock, CObjectIStream::ByteBlock, CFlatGapLoc, CTSeq_Base, CID2S_Seq_id_Interval_Base, CID2S_Interval_Base, CID2S_Gi_Interval_Base, CSeqEdit_Cmd_ChangeSeqAttr_Base::C_Data, CSeq_literal_Base, CSeq_inst_Base, CINSDSeq_Base, CGC_Scaf_stats_Base, CGBSeq_Base, CSupDataArray_Base::C_Attlist, CData_Base::C_Attlist, CIntron_params_Base, CIntergenic_params_Base, CBlastTabular
• SetLengthDown() : COpenRange< Position >
• SetLengthExp() : CLDFilterParams
• SetLens() : CSparse_align_Base, CPacked_seg_Base, CDense_seg_Base
• SetLensZoom() : CSeqGraphicRenderer
• SetLetter() : CSequence
• SetLevel() : CCompression, ICompression, CReaderRequestResult, CBioseq_set_Info, CBioseq_set_EditHandle, CT3Error_Base, CTaxon1_error_Base, CBioseq_set_Base, CTaxElement_Base, CSeqEdit_Cmd_ChangeSetAttr_Base::C_Data, CAuthor_Base
• SetLevelIter() : CRangeMapIterator< Traits >
• SetLevels() : CTableSortMultiChoice
• SetLexer() : AbstractParser
• SetLibaccession() : CMSHits_Base
• SetLibnames() : CMSLibrarySettings_Base
• SetLibrary() : CClone_ref_Base, CPluginLibInfo_Base
• SetLibsearchsettings() : CMSSearchSettings_Base
• SetLId() : CTrackedSeeds_Base< NHITS >
• SetLightColor() : CGlBackground
• SetLim() : CInt_fuzz_Base
• SetLimitNone() : SAnnotSelector
• SetLimits() : oligofar::COligoFarApp, CNCMemManager, CEntrez2_boolean_exp_Base, CCrossPanelIR
• SetLimitSeqAnnot() : SAnnotSelector
• SetLimitSeqEntry() : SAnnotSelector
• SetLimitsMode() : CGraphPanel
• SetLimitTSE() : SSeqMapSelector, SAnnotSelector
• SetLine() : CNcbiDiag
• SetLineage() : COrgName_Base, CEntrez2_hier_node_Base
• SetLineage_changed() : CT3RefreshFlags_Base
• SetLineage_count() : CEntrez2_hier_node_Base
• SetLineCount() : CTextItem, ITextItem
• SetLineLen() : CDisplaySeqalign
• SetLineNumber() : CObjReaderLineException
• SetLineWidth() : CGuideTree, CSeqGraphicConfig, CBoundaryParams, CwxPhyloSettingsDlg
• SetLink() : CLinkSet_Base, CLinkSetDb_Base::C_Data, CLinkList_Base, CHG_Commentary_Base, CViewDescriptor_Base::C_Data
• SetLink_count() : CEntrez2_link_count_Base, CEntrez2_db_info_Base
• SetLink_descr() : CEntrez2_link_info_Base
• SetLink_menu() : CEntrez2_link_info_Base
• SetLink_name() : CEntrez2_link_info_Base
• SetLink_type() : CEntrez2_link_count_Base
• SetLink_type_count() : CEntrez2_link_count_list_Base
• SetLinkage() : CSeq_gap_Base
• SetLinkId() : CLink_Base
• SetLinkIncremental() : CTool_Base::C_Attlist
• SetLinkInfo() : CIdLinkSet_Base
• SetLinkList() : CDbInfo_Base
• SetLinkMatePairs() : CSGAlignmentDS
• SetLinkName() : CObjUrl_Base, CLinkSetDb_Base, CELink_Request
• SetLinkouts() : CBuildDatabase
• SetLinkoutUrl() : CSs_Base::C_Attlist, CAssay_Base::C_Attlist
• SetLinks() : CLinkSet_Base::C_Data, CHG_Gene, CEntrez2_link_count_list_Base, CEntrez2_db_info_Base, CBlast_def_line_Base
• SetLinkSet() : CELinkResult_Base
• SetLinkSetDb() : CLinkSet_Base::C_Data::C_Links::C_LL
• SetLinkSetDbHistory() : CLinkSet_Base::C_Data::C_Links::C_LL::C_LW
• SetLinktype() : CEntrez2_get_links_Base
• SetLinkUsedTSE() : SSeqMapSelector
• SetLinkValue() : CRsLinkout_Base::C_Attlist
• SetList() : CEntrez2_term_list_Base, CEntrez2_docsum_list_Base, CPluginArg
• SetListener() : SNetServiceImpl, CPrefetchRequest, CDataChangeNotifier, CScoreCache, CAlnMultiModel, CThreadPoolEngine, CSchedulerEngine, IAppJobEngine, CObjectManagerEngine, CAppTask, IAppTask, CGridWorkerApp, CGridWorkerNode
• SetLiteral() : CDelta_seq_Base, CModel_coordinate_set_Base::C_Coordinates
• SetLkDetect() : CBDB_Env
• SetLL() : CLinkSet_Base::C_Data::C_Links
• SetLNG() : CObjectUrl_Base::C_Attlist
• SetLoaded() : CLoadLock_Base, CLoadInfoLock, CProcessor, CTSE_LoadLock, CTSE_Chunk_Info, CDataSource
• SetLoadedAccVer() : CLoadInfoSeq_ids
• SetLoadedGi() : CLoadInfoSeq_ids
• SetLoadedLabel() : CLoadInfoSeq_ids
• SetLoader() : CLDS_Database
• SetLoaderOptions() : CObjectManager
• SetLoadingOptions() : CBlastSearchTask, CNetBlastMonitoringJob
• SetLoc() : CQueryParseNode, CReferenceItem, CSourceFeatureItem, CBlobSplitterImpl, CSeqTable_single_data_Base, CSeqTable_multi_data_Base, CSeq_graph_Base, CImp_feat_Base, CCode_break_Base, CStd_seg_Base, CDelta_seq_Base, CProject_item_Base, CBDB_BlobMetaContainer
• SetLoc_set() : CID2S_Seq_loc_Base
• SetLocal() : CTSeq_Base, CSeq_id_Base, CFeat_id_Base, CAnnot_id_Base, CResidue_graph_pntr_Base, CGuiRegistry
• SetLocal_id() : CBiostruc_id_Base
• SetLocal_ids() : CID2S_Seq_feat_Ids_Info_Base
• SetLocal_name() : CGC_Replicon_Base
• SetLocalCopyHook() : CTypeInfo, CObjectTypeInfoCV, CObjectTypeInfoVI, CObjectTypeInfoMI, CObjectTypeInfo, CVariantInfo, CMemberInfo
• SetLocalHook() : CHookData< Hook, Function >, CHookDataBase
• SetLocalIdCounterInitValue() : CBlastInputSourceConfig
• SetLocalReadHook() : CTypeInfo, CObjectTypeInfoCV, CObjectTypeInfoVI, CObjectTypeInfoMI, CObjectTypeInfo, CVariantInfo, CMemberInfo
• SetLocalResFreqBoost() : CMultiAlignerOptions
• SetLocalSkipHook() : CTypeInfo, CObjectTypeInfoVI, CObjectTypeInfoMI, CObjectTypeInfo, CVariantInfo, CMemberInfo
• SetLocalWriteHook() : CTypeInfo, CObjectTypeInfoCV, CObjectTypeInfoVI, CObjectTypeInfoMI, CObjectTypeInfo, CVariantInfo, CMemberInfo
• SetLocation() : CFlatFileContext, CSeq_feat_Base, CClone_seq_Base, CPubmed_url_Base, CEntrez_general_Base, CBiostruc_feature_Base, CINSDFeature_Base, CID2_Get_Blob_Details_Base, CHG_Gene_Base, CGBFeature_Base, CEntrezgene_Base, CCdd_repeat_Base, CAlign_annot_Base, CBookmark, CCgiResponse, CSourceFile_Base::C_Attlist
• SetLocation_accurate() : CTxinit_Base
• SetLocationIsInterval() : SAnnotObject_Index
• SetLocationIsPoint() : SAnnotObject_Index
• SetLocationIsWhole() : SAnnotObject_Index
• SetLocations() : CBlast4_mask_Base, CDataHandleSelector_Base
• SetLockTimeout() : CBDB_Env
• SetLocs() : CSeq_annot_Base::C_Data, CRemap_query_Base
• SetLocSnpId() : CSs_Base::C_Attlist
• SetLocType() : CMapLoc_Base::C_Attlist
• SetLocus() : CGene_ref_Base, CMim_entry_Base, CINSDSeq_Base, CGBSeq_Base, CEntrezgene_Base
• SetLocus_display() : CGene_source_Base
• SetLocus_tag() : CGene_ref_Base, CHG_Gene_Base
• SetLog() : CCdd_Project_Base
• SetLogAutoRemove() : CBDB_Env
• SetLogBSize() : CBDB_Env
• SetLogBufferIndex() : CDiagConsolePanel
• SetLogDir() : CBDB_Env, CBDB_Cache
• SetLogFile() : CFileDiagHandler
• SetLogFileMax() : CBDB_Env, CBDB_Cache
• SetLogging() : CNetScheduleServer, CFileAPI
• SetLogInMemory() : CBDB_Env
• SetLoginTimeout() : CDataSource, I_DriverContext, impl::CDriverContext, CDBLibContext, CDBConnectionFactory, CTLibContext, IDataSource
• SetLogName() : CStreamDiagHandler_Base
• SetLogRate_Limit() : CDiagContext
• SetLogRate_Period() : CDiagContext
• SetLogRegionMax() : CBDB_Env
• SetLogStream() : CDataSource, IDataSource
• SetLogTruncate() : CDiagContext
• SetLomasscutoff() : CMSSearchSettings_Base
• SetLong_desc() : CPluginArg_Base
• SetLongestIntronLength() : CBlastOptionsLocal, CTBlastnOptionsHandle, CBlastxOptionsHandle, CBlastOptions
• SetLookup() : CTaxon1_resp_Base, CTaxon1_req_Base
• SetLookupTableDefaults() : CTBlastxOptionsHandle, CTBlastnOptionsHandle, CBlastxOptionsHandle, CBlastRPSOptionsHandle, CBlastProteinOptionsHandle, CBlastOptionsHandle, CBlastNucleotideOptionsHandle
• SetLookupTableType() : CBlastOptionsLocal, CBlastOptions, CBlastNucleotideOptionsHandle
• SetLOOParams() : CBMARefinerTrial, CBMARefinerEngine
• SetLoops() : CCoreDef_Base
• SetLow_prec_data() : CTx_evidence_Base
• SetLower() : CPluginValueRangeConstraint_Base, CPluginValueConstraint_Base
• SetLowercaseMask() : CBlastInputSourceConfig
• SetLowercaseOption() : CFastaLoadParams
• SetLtop() : CPC_StereoPlanar_Base
• SetLW() : CLinkSet_Base::C_Data::C_Links::C_LL
• SetM() : CMSSpectrumMatch, CLadder
• SetM0() : CCn3d_GL_matrix_Base
• SetM1() : CCn3d_GL_matrix_Base
• SetM10() : CCn3d_GL_matrix_Base
• SetM11() : CGL_matrix_Base, CCn3d_GL_matrix_Base
• SetM12() : CGL_matrix_Base, CCn3d_GL_matrix_Base
• SetM13() : CGL_matrix_Base, CCn3d_GL_matrix_Base
• SetM14() : CGL_matrix_Base, CCn3d_GL_matrix_Base
• SetM15() : CCn3d_GL_matrix_Base
• SetM2() : CCn3d_GL_matrix_Base
• SetM21() : CGL_matrix_Base
• SetM22() : CGL_matrix_Base
• SetM23() : CGL_matrix_Base
• SetM24() : CGL_matrix_Base
• SetM3() : CCn3d_GL_matrix_Base
• SetM31() : CGL_matrix_Base
• SetM32() : CGL_matrix_Base
• SetM33() : CGL_matrix_Base
• SetM34() : CGL_matrix_Base
• SetM4() : CCn3d_GL_matrix_Base
• SetM41() : CGL_matrix_Base
• SetM42() : CGL_matrix_Base
• SetM43() : CGL_matrix_Base
• SetM44() : CGL_matrix_Base
• SetM5() : CCn3d_GL_matrix_Base
• SetM6() : CCn3d_GL_matrix_Base
• SetM7() : CCn3d_GL_matrix_Base
• SetM8() : CCn3d_GL_matrix_Base
• SetM9() : CCn3d_GL_matrix_Base
• SetMainValue() : CSearchFormBase, IDMSearchForm
• SetMajor() : CVersionStruct_Base
• SetMakeDelta() : CFastaLoadParams
• SetMakePlural() : CAutoDefFeatureClause_Base
• SetMallocThreshold() : CObjectMemoryPool
• SetMan() : CPub_Base
• SetMan_id() : CCit_let_Base
• SetManagedExtensions() : CConfiguration_Base::C_Attlist
• SetManager() : CDotMatrixPanel, CFileLoadOptionPanel
• SetManagers() : CRunToolDlg, COpenDlg
• SetMandatorytags() : CINSDTagsetRules_Base, CGBTagsetRules_Base
• SetMap() : CSeq_ext_Base
• SetMap_type() : CMaps_Base::C_Method
• SetMaploc() : CGene_ref_Base, CSeqdesc_Base, CPubdesc_Base
• SetMapLoc() : CPrimarySequence_Base, CComponent_Base
• SetMapped() : SAlignment_Segment::SAlignment_Row
• SetMappedLocation() : CSeq_loc_Conversion
• SetMappedPartial_from() : CAnnotMapping_Info
• SetMappedPartial_to() : CAnnotMapping_Info
• SetMappedPoint() : CAnnotMapping_Info
• SetMappedRanges() : CSegmentGlyph, CLayoutSeqMap
• SetMappedSeq_align() : CAnnotMapping_Info
• SetMappedSeq_align_Cvts() : CAnnotMapping_Info
• SetMappedSeq_feat() : CAnnotMapping_Info
• SetMappedSeq_id() : CAnnotMapping_Info
• SetMappedSeq_loc() : CAnnotMapping_Info
• SetMappedStrand() : CAnnotMapping_Info
• SetMapping() : CRuler
• SetMapping_precise() : CTxinit_Base
• SetMappingContext() : CWigLoadParams, CGffLoadParams, CBedLoadParams
• SetMappingFromFile() : CTaxIdSet
• SetMaps() : CSeq_code_set_Base
• SetMaps_from_builds() : CRMRequest_Base, CRMReply_Base
• SetMaps_to_builds() : CRMRequest_Base, CRMReply_Base
• SetMapValue() : CSeqDB_ColumnEntry
• SetMapWeight() : CAssembly_Base::C_SnpStat::C_Attlist
• SetMarginBottom() : CwxPhyloSettingsDlg, CPrintOptions
• SetMarginLeft() : CwxPhyloSettingsDlg, CPrintOptions
• SetMarginRight() : CwxPhyloSettingsDlg, CPrintOptions
• SetMargins() : CPhyloTreeScheme
• SetMarginTop() : CwxPhyloSettingsDlg, CPrintOptions
• SetMarkerType() : CScatterGraph, CComboChart
• SetMarkQueryNode() : CGuideTreeCalc
• SetMask() : CJob, CTar, CFastaOstream
• SetMask_for_lookup_table_only() : CBlast4_common_options_query_filtering_Base
• SetMaskAtHash() : CBlastOptionsLocal, CBlastOptionsHandle, CBlastOptions
• SetMaskData() : CWriteDB_Impl, CWriteDB
• SetMaskDataSource() : CBuildDatabase
• SetMaskedLetters() : CWriteDB_Impl, CWriteDB
• SetMaskedQueryRegions() : CSearchResults
• SetMaskedRegions() : CBlastQueryVector, CBlastSearchQuery
• SetMaskLetters() : CBuildDatabase
• SetMasks() : CSeqDBAliasNode, CBlast_mask_list_Base, CBlast_db_mask_info_Base, CBlast4_get_search_results_reply_Base
• SetMass() : CMSHits_Base
• SetMassAndMask() : CSearch< LEGACY, NHITS >
• SetMassdiff() : CMSIonAnnot_Base
• SetMassTolerance() : CMSMatchedPeak
• SetMaster() : CBioseqContext, CBiostruc_align_Base
• SetMaster3d() : CCdd_Base
• SetMaster_id() : CSparse_seg_Base
• SetMasterAnnotMap() : CCdAnnotationInfo
• SetMasterBackColor() : CAlnMultiRenderer, CAlnMultiPane
• SetMasterGeneticCode() : CDisplaySeqalign
• SetMasterRow() : CAlnMultiModel
• SetMatch() : CAlnReader, CSpliced_exon_chunk_Base
• SetMatch_expression() : CField_rule_Base
• SetMatch_name() : CDependent_field_rule_Base
• SetMatch_reward() : CBlast4_common_options_scoring_Base
• SetMatchAlnLocs() : CBroadcastDialog
• SetMatchByProduct() : CBroadcastDialog
• SetMatchedOnly() : CAutoCompleteCombo
• SetMatchedPeakSet() : CMSMatchedPeakSet
• SetMatchMap() : CMSMatchedPeakSetMap
• SetMatchRadios() : CBroadcastDialog
• SetMatchReward() : CBlastOptionsLocal, CBlastOptions, CBlastNucleotideOptionsHandle
• SetMatchType() : CMSMatchedPeak
• SetMate() : oligofar::CMappedAlignment, oligofar::CSRead
• SetMathResult() : CMathResponse_Base
• SetMatrix() : oligofar::TAligner_SW< CQuery, CSubject >, oligofar::CAligner, oligofar::CAligner_SW, CCn3d_view_settings_Base, CParameters_Base, CBlast4_value_Base, CMarkov_chain_array_Base
• SetMatrix_list() : CBlast4_value_Base
• SetMatrix_name() : CBlast4_common_options_scoring_Base
• setMatrixForExtensionScores() : BlockExtender
• SetMatrixName() : CBlastOptionsLocal, CFormatRpsDbParameters_Base, CSimpleB2SWrapper, CBlastProteinOptionsHandle, CBlastOptions, CBlastNucleotideOptionsHandle
• SetMax() : CReal_graph_Base, CInt_graph_Base, CByte_graph_Base, CPC_RealMinMax_Base, CPC_IntegerMinMax_Base, CInt_fuzz_Base::C_Range, CDensityMap< CntType >, CLength_distribution_params_Base::C_Range, CAlignShadow
• SetMax_gapped_scaf_length() : CGC_Scaf_stats_Base::C_Length
• SetMax_UIDs() : CEntrez2_limits_Base
• SetMax_UIDS() : CEntrez2_get_links_Base
• SetMax_ungapped_scaf_length() : CGC_Scaf_stats_Base::C_Length
• SetMaxAmbiguities() : oligofar::CSeqScanner, oligofar::CQueryHash
• SetMaxBadLen() : CProSplignOutputOptions
• SetMaxBlobSize() : CBDB_Cache
• SetMaxcharge() : CMSChargeHandle_Base
• SetMaxColor() : CRgbaColorTable
• SetMaxCompsPerQuery() : CSplign
• SetMaxConnect() : CDriverManager, CDbapiConnMgr, CTLibContext
• SetMaxConnections() : CServer_ConnectionPool
• SetMaxDate() : CESearch_Request, CELink_Request
• SetMaxDeletionCount() : CAlignParam
• SetMaxDeletionLength() : CAlignParam
• SetMaxDeletions() : oligofar::CQueryHash
• SetMaxDist() : oligofar::CFilter
• SetMaxDistance() : oligofar::CQueryHash, CClusterer::CSingleCluster
• SetMaxDivergence() : CGuideTreeCalc
• SetMaxErrors() : CBDB_CheckPointThread
• SetMaxFailuresAllowed() : CWNJobsWatcher
• SetMaxFileSize() : CWriteDB_Impl, CWriteDB, CBuildDatabase
• SetMaxGenomicExtent() : CSplignParams, CSplign
• SetMaxHashDistance() : CHashParam
• SetMaximumConnections() : CReader
• SetMaximumRetryCount() : CReader
• SetMaxInClusterDist() : CMultiAlignerOptions
• SetMaxIndelCount() : CAlignParam
• SetMaxIndelLength() : CAlignParam
• SetMaxInlineSize() : CRemoteAppResultMB_Impl, CRemoteAppRequestMB_Impl
• SetMaxInputSize() : CRemoteAppRequestMB
• SetMaxInsertionCount() : CAlignParam
• SetMaxInsertionLength() : CAlignParam
• SetMaxInsertions() : oligofar::CQueryHash
• SetMaxIntron() : CCompartmentAccessor< THit >, CCompartmentFinder< THit >, CSplign
• SetMaxItemHeight() : CMapControl
• SetMaxItems() : CRgbaColorTable
• SetMaxJobsAllowed() : CWNJobsWatcher
• SetMaxlength() : CLoopConstraint_Base
• SetMaxLength() : CMultiSeqInfo
• SetMaxLockers() : CBDB_Env
• SetMaxLockObjects() : CBDB_Env
• SetMaxLocks() : CBDB_Env
• SetMaxMismatch() : oligofar::CGuideFile
• SetMaxMismatches() : oligofar::CQueryHash
• SetMaxModifiers() : CAutoDefModifierCombo
• SetMaxmods() : CMSSearchSettings_Base
• SetMaxMRUSize() : CUIToolRegistry
• SetMaxnoenzyme() : CMSSearchSettings_Base
• SetMaxNumHspPerSequence() : CBlastOptionsLocal, CBlastOptionsHandle, CBlastOptions
• SetMaxNumOfConnAttempts() : CDBConnectionFactory
• SetMaxNumOfDispatches() : CDBConnectionFactory
• SetMaxNumOfServerAlternatives() : CDBConnectionFactory
• SetMaxNumOfValidationAttempts() : CDBConnectionFactory
• SetMaxOutputSize() : CRemoteAppResultMB_Executer
• SetMaxPair() : CPassParam
• SetMaxplex() : CID1server_maxcomplex_Base
• SetMaxproductcharge() : CMSChargeHandle_Base
• SetMaxproductions() : CMSSearchSettings_Base
• SetMaxRow() : CLayeredLayout
• SetMaxScore() : CWinMaskConfig
• SetMaxSimplicity() : oligofar::CQueryHash, CHashParam
• SetMaxSize() : CLoadInfoMap< Key, Info >, SAnnotSelector, CTimeMRUList< T >, CMRUList< T >
• SetMaxSlop() : CFindOverlapParams
• SetMaxstop() : CCoreBlock_Base
• SetMaxStorageSize() : CObjPool< TObjType, TObjFactory >
• SetMaxSubjAmb() : CPassParam
• SetMaxtaxid() : CTaxon1_resp_Base, CTaxon1_req_Base
• SetMaxTextImageSize() : I_DriverContext, impl::CDriverContext, CDBLibContext, CTLibContext
• SetMaxThreads() : CThreadPool_Controller
• SetMaxVal() : CBDB_BufferManager, CBDB_FieldLString, CBDB_FieldString, CBDB_FieldFixedByteString, CBDB_FieldSimpleFloat< T >, CBDB_FieldSimpleInt< T >, IBDB_Field
• SetMaxVolSize() : CElementaryMatching
• SetMaxVolumeLetters() : CWriteDB_Impl, CWriteDB
• SetMaxWindowCount() : oligofar::CQueryHash
• SetMBGappedExtensionDefaults() : CDiscNucleotideOptionsHandle, CBlastNucleotideOptionsHandle
• SetMBHitSavingOptionsDefaults() : CBlastNucleotideOptionsHandle
• SetMBIndexLoaded() : CBlastOptionsLocal, CBlastOptions
• SetMBInitialWordOptionsDefaults() : CDiscNucleotideOptionsHandle, CBlastNucleotideOptionsHandle
• SetMBLookupTableDefaults() : CDiscNucleotideOptionsHandle, CBlastNucleotideOptionsHandle
• SetMBScoringOptionsDefaults() : CDiscNucleotideOptionsHandle, CBlastNucleotideOptionsHandle
• SetMbstat() : CBlastOutput_Base
• SetMBTemplateLength() : CBlastOptionsLocal, CBlastOptions
• SetMBTemplateType() : CBlastOptionsLocal, CBlastOptions
• SetMd5() : CViewDataLink_Base::C_Fingerprint
• SetMedent() : CPubmed_entry_Base
• SetMedia() : CPrintOptions
• SetMedium() : CCit_sub_Base
• SetMedline() : CPub_set_Base, CPub_Base, CArticleId_Base
• SetMedlineLinks() : CMim_entry_Base
• SetMeet() : CCit_proc_Base
• SetMembBits() : CBuildDatabase
• SetMember() : CPC_AssayPanel_Base
• SetMemberId() : CObjectStackFrame
• SetMembers() : CCompartmentFinder< THit >::CCompartment
• setMembershipColor() : SeqTree
• SetMemberships() : CBlast_def_line_Base
• SetMemBufferSize() : CSQLITE3_Cache, CDBAPI_Cache
• SetMemento() : IMementoOriginator
• SetMemFunctions() : CPrimitiveTypeFunctions< T >, CTimeFunctions, CStlOneArgTemplate, CStlClassInfoFunctions< Container >, CPrimitiveTypeInfo
• SetMemLimits() : CNCMMCentral
• SetMemoryBound() : CSeqDBImpl, CSeqDBAtlas, CSeqDBMapStrategy, CSeqDB
• SetMemoryPool() : CObjectIStream
• SetMempTrickle() : CBDB_Cache
• SetMenu() : CPopupMenuEvent
• SetMenu_item() : CPluginInfo_Base
• SetMenulabel() : CFeatDef_Base
• SetMenuListener() : CWindowManager
• SetMenuName() : CDbInfo_Base
• SetMenuService() : CWindowManagerService
• SetMergeAbutting() : CSeq_loc_Mapper_Base
• SetMergeAccumulator() : CMergeVolumes
• SetMergeAll() : CSeq_loc_Mapper_Base
• SetMergeBySeg() : CSeq_loc_Mapper_Base
• SetMergeContained() : CSeq_loc_Mapper_Base
• SetMergeExons() : CGffLoadParams
• SetMergeFlags() : CAlnUserOptions
• SetMergeHistory() : CRs_Base, CRs_Base::C_E_MergeHistory
• SetMergeLogLines() : CGridWorkerApp
• SetMergeNone() : CSeq_loc_Mapper_Base
• SetMergeOnyCdsMrna() : CGffLoadParams
• SetMergeStore() : CMergeVolumes
• SetMesh() : CPC_XRefData_Base, CMedline_entry_Base
• SetMessage() : oligofar::CProgressIndicator, CT3Error_Base, CID2_Error_Base, CIteration_Base, CBlast4_error_Base, IReporter, CPluginMRUEntry_Base, CSearchMessage
• SetMethod() : CSageData, CSeqdesc_Base, CMaps_Base, CAssay_Base
• SetMethodClass() : CSs_Base::C_Attlist
• SetMethodOfCombination() : CAcqSpecification_Base::C_Attlist
• SetMgc_changed() : CT3RefreshFlags_Base
• SetMgcode() : COrgName_Base
• SetMicroSecond() : CTime
• SetMid() : CPC_AssayPanelTestResult_Base, CPC_AssayPanelMember_Base
• SetMiddle() : CName_std_Base
• SetMiddle_initial() : CContact_info_Base
• SetMiddleGap() : CAlnReader
• SetMiddleLineStyle() : CDisplaySeqalign
• SetMidline() : CHsp_Base
• SetMidpointRooting() : TreeAlgorithm
• SetMilliSecond() : CTime
• SetMim() : CPC_XRefData_Base
• SetMimEntries() : CMim_set_Base
• SetMimNumber() : CMim_entry_Base
• SetMimType() : CMim_entry_Base
• SetMin() : CReal_graph_Base, CInt_graph_Base, CByte_graph_Base, CPC_RealMinMax_Base, CPC_IntegerMinMax_Base, CInt_fuzz_Base::C_Range, CDensityMap< CntType >, CLength_distribution_params_Base::C_Range, CAlignShadow
• SetMin_gapped_scaf_length() : CGC_Scaf_stats_Base::C_Length
• SetMin_ungapped_scaf_length() : CGC_Scaf_stats_Base::C_Length
• SetMinBlockLength() : oligofar::CSeqScanner
• SetMinBlockSize() : BlockBoundaryAlgorithm
• SetMincharge() : CMSChargeHandle_Base
• SetMinColor() : CRgbaColorTable
• SetMinCompartmentIdentity() : CSplign
• SetMinCompIdentity() : CSplignParams
• SetMinDate() : CESearch_Request, CELink_Request
• SetMinDiagSeparation() : CBlastOptionsLocal, CBlastOptionsHandle, CBlastOptions
• SetMinDist() : oligofar::CFilter, CLayeredLayout, CCompactLayout, CColumnLayout, C2DLayoutEngine
• SetMinExonId() : CProSplignOutputOptions
• SetMinExonIdentity() : CSplignParams, CSplign
• SetMinExonPos() : CProSplignOutputOptions
• SetMinFlankingExonLen() : CProSplignOutputOptions
• SetMinGoodLen() : CProSplignOutputOptions
• SetMinhit() : CMSPeak, CMSSearchSettings_Base
• SetMinHitLength() : CElementaryMatching
• SetMinIdty() : CElementaryMatching
• SetMinimalRebuild() : CTool_Base::C_Attlist
• SetMinInframeFrac() : CChainer
• SetMinIntronLen() : CProSplignScoring
• SetMinlength() : CLoopConstraint_Base
• SetMinMatches() : CCompartmentFinder< THit >
• SetMinnoenzyme() : CMSSearchSettings_Base
• SetMinor() : CVersionStruct_Base
• SetMinPair() : CPassParam
• SetMinPercentIdentity() : CFindOverlapParams
• SetMinPolyA() : CChainer
• SetMinPositives() : CProSplignOutputOptions
• SetMinQueryLength() : CElementaryMatching
• SetMinScaleX() : CGlPane
• SetMinScaleY() : CGlPane
• SetMinScor() : CChainer
• SetMinScore() : CWinMaskConfig, AlignedDM
• SetMinSingletonIdentity() : CSplign
• SetMinSingletonIdentityBps() : CSplign
• SetMinSingletonIdty() : CElementaryMatching
• SetMinSingletonMatches() : CCompartmentFinder< THit >
• SetMinspectra() : CMSSearchSettings_Base
• SetMinstart() : CCoreBlock_Base
• SetMinThreads() : CThreadPool_Controller
• SetMinusCuts() : CRSpec, CRSite
• SetMinusStrand() : IBlastSeqVector
• SetMinute() : CDate_std_Base, CTime
• SetMinVal() : CBDB_BufferManager, CBDB_FieldLString, CBDB_FieldString, CBDB_FieldFixedByteString, CBDB_FieldSimpleFloat< T >, CBDB_FieldSimpleInt< T >, IBDB_Field
• SetMiscFeatRule() : CAutoDef
• SetMiscInfo() : CMim_reference_Base
• SetMismatch() : CCdregion_Base, CSpliced_exon_chunk_Base
• SetMismatch_penalty() : CBlast4_common_options_scoring_Base
• SetMismatches() : oligofar::TAlignerBase< CQuery, CSubject >, CBlastTabular
• SetMismatchPenalty() : oligofar::CGuideFile, CBlastOptionsLocal, CBlastOptions, CBlastNucleotideOptionsHandle
• SetMismatchScore() : oligofar::CScoring
• SetMissedcleave() : CMSSearchSettings_Base
• SetMissing() : CAlnReader
• SetMissingisotope() : CMSIonAnnot_Base
• SetMix() : CSeq_loc_Base
• SetMkTypLibCompatible() : CTool_Base::C_Attlist
• SetMl() : CEntrez_general_Base::C_Data, CPerson_id_Base, CAuth_list_Base::C_Names
• SetMl_jta() : CTitle_Base::C_E
• SetMlfield() : CMedline_entry_Base
• SetMmdb() : CPC_XRefData_Base, CPC_Source_Base
• SetMmdb_id() : CPC_MMDBSource_Base, CBiostruc_id_Base
• SetMod() : COrgName_Base, COrg_ref_Base, CMSModSpec_Base
• SetModDate() : CMim_edit_item_Base
• SetMode() : CConnection, CFlatFileConfig, CTooltipHandler, CMouseZoomHandler, CFlatFileExportParams, CFilter, IConnection, CDirEntry
• SetModeDump() : CFlatFileConfig
• SetModeEntrez() : CFlatFileConfig
• SetModeGBench() : CFlatFileConfig
• SetModel() : CBiostruc_Base, CwxTableListCtrl
• SetModel_coord_set_id() : CRegion_coordinates_Base
• SetModel_coordinates() : CBiostruc_model_Base
• SetModel_id() : CRegion_pntrs_Base
• SetModel_organisms() : CCdd_pref_nodes_Base
• SetModel_space() : CBiostruc_model_Base
• SetModelDimensions() : IPhyloTreeRenderer
• SetModelLimitsRect() : CGlPane
• SetModelRect() : CSequenceTickGraph, CSequenceTextGraph, CRuler, CRenderableImpl, IRenderable, CGraphContainer, CLayoutObject
• SetModelview() : CCamera_Base
• SetModEnum() : CMSModInfo
• SetModeRelease() : CFlatFileConfig
• SetModif() : CSeqdesc_Base
• SetModified() : CProjectEditDlg
• SetModified_date() : CProjectDescr_Base, CProjectAnnot_Base
• SetModifiedDate() : CProjectItem, CProjectDescr, IGBProject, CGBProjectHandle, CGBProject_ver2, CGBProject
• SetModifiedFlag() : IRegistry
• SetModifiedTime() : CWorkspacePrx, CProjectPrx
• SetModifiers() : CSpliced_seg_Base
• SetModInfo() : CMSHit
• SetModMass() : CUnimod
• SetMods() : CMSHits_Base
• SetModset() : CMSRequest_Base
• SetModToMatch() : PFindMod
• SetModtype() : CMSModHit_Base
• SetModule() : CDataValue, CException, CNcbiDiag
• SetModuleContainer() : CModuleContainer
• SetModuleDefinitionFile() : CTool_Base::C_Attlist
• SetModuleFileSuffix() : CDataTypeModule
• SetModuleName() : CTypeStrings, CTypeInfo, CEnumeratedTypeValues
• SetMol() : CSeqMap, CPDB_seq_id_Base, CSeqEdit_Cmd_ChangeSeqAttr_Base::C_Data, CSeq_inst_Base, CGC_GenomicPart_Base
• SetMol_id() : CPC_AssayTargetInfo_Base
• SetMol_type() : CSeqdesc_Base
• SetMolecule_graphs() : CBiostruc_graph_Base
• SetMolecule_id() : CPC_MMDBSource_Base, CResidue_interval_pntr_Base, CAtom_pntr_Base, CCn3d_molecule_location_Base
• SetMolecule_ids() : CResidue_explicit_pntrs_Base, CMolecule_pntrs_Base, CAtom_pntrs_Base
• SetMolecule_name() : CPC_MMDBSource_Base
• SetMolecule_type() : CPC_AssayTargetInfo_Base, CBiomol_descr_Base
• SetMolecules() : CChem_graph_pntrs_Base
• SetMoleculeType() : CSearchDatabase
• SetMolgroup() : CFeatDef_Base
• SetMolinfo() : CSeqdesc_Base
• SetMols() : CGC_Assembly_Base
• SetMolType() : CSs_Base::C_Attlist, CRs_Base::C_Attlist, CAssay_Base::C_Attlist
• SetMoltype() : CINSDSeq_Base, CGBSeq_Base
• SetMonitor() : CNCBlobStorage, CPipeProcessWatcher, CBDB_Env, CBDB_Cache
• SetMonitorSocket() : CQueue
• SetMonomass() : CMSModSpec_Base, CMSMassSet_Base
• SetMonth() : CMim_date_Base, CDate_std_Base, CTime
• SetMore() : CBlast_mask_list_Base
• SetMoreion() : CMSMZHit_Base
• SetMoresettings() : CMSRequest_Base
• SetMouseMode() : SequenceViewerWidget, SequenceViewerWidget_SequenceArea
• SetMouseOverFormName() : CAlnGraphic
• SetMoves() : CTransform_Base
• SetMp() : CMedline_qual_Base, CMedline_mesh_Base
• SetMpMaxWrite() : CBDB_Env
• SetMpMmapSize() : CBDB_Env
• SetMrnaAcc() : CFxnSet_Base::C_Attlist
• SetMrnaCDS() : CChainer
• SetMrnaVer() : CFxnSet_Base::C_Attlist
• SetMRU() : CProjectLoadOptionPanel
• SetMRUToolNames() : CUIToolRegistry
• SetMsg() : CwxTrackSettingsDlg, CwxTrackNameDlg, CValidErrItem_Base, CTaxon1_error_Base, CRemap_reply_Base, CEntrez2_reply_Base, CLayoutTrack
• SetMsLevel() : CSpectrumInstrument_Base::C_Attlist, CPrecursor_Base::C_Attlist
• SetMsmstol() : CMSSearchSettings_Base
• SetMTSliceSize() : CSeqDBAtlas
• SetMuid() : CPub_Base, CMedlars_entry_Base, CCit_gen_Base
• SetMultiIdFlag() : SAnnotObject_Index
• SetMultipartMode() : CCgiResponse
• SetMultiple() : SAnnotObject_Key, CHTML_select
• SetMultipleFlag() : CFormArgDesc
• SetMultipleObjectsAccepted() : CProjectViewTypeDescriptor
• SetMutation() : CMim_allelic_variant_Base
• SetMyCurrentStyleName() : CThemeSet
• SetMZ() : CMSBasicPeak
• SetMz() : CMSSpectrum_Base, CMSMZHit_Base
• SetMzArrayBinary() : CSpectrum_Base
• SetMzhits() : CMSHits_Base
• SetMZI() : CMSPeakList
• SetMzRangeStart() : CSpectrumInstrument_Base::C_Attlist
• SetMzRangeStop() : CSpectrumInstrument_Base::C_Attlist
• SetN() : CMSSpectrumMatch
• SetN1() : CChiral_center_Base
• SetN15mass() : CMSModSpec_Base, CMSMassSet_Base
• SetN2() : CChiral_center_Base
• SetN3() : CChiral_center_Base
• SetN50() : CGC_Scaf_stats_Base
• SetNAAs() : CSeqGraphicRenderer, CFeaturePanel
• SetNAAsRef() : CTrackContainer
• SetNaHSO3mode() : oligofar::CQueryHash
• SetName() : DTDElement, DTDAttribute, DTDEntity, IOperationTest, CSeqDB_FilterTree, CrRNASubPanel, CmRNASubPanel, pythonpp::CExtType, CMSPeak, CAnyContentObject, CMemberId, CData_set_id_Base, CNCBI_Sample_ASN_Type_Base, CProvider_Base, CItem_Base::C_Attlist, CProvider_Base, CTSE_Info, SAnnotObjectsIndex, CDataLoader, CT3Request_Base, CT3Error_Base, CContact_info_Base, CID2S_Seq_annot_place_Info_Base, CID2S_Seq_annot_Info_Base, CTextseq_id_Base, CTxinit_Base, CTaxElement_Base, CSubSource_Base, CRNA_ref_Base::C_Ext, CProt_ref_Base, CPCRPrimer_Base, COrgName_Base, CGenetic_code_Base::C_E, CGene_nomenclature_Base, CClone_ref_Base, CSeqEdit_Cmd_ReplaceAnnot_Base, CSeqEdit_Cmd_RemoveAnnot_Base, CSeqEdit_Cmd_AddAnnot_Base, CSeq_code_table_Base::C_E_Table, CEMBL_dbname_Base, CTextannot_id_Base, CSeqdesc_Base, CSeq_annot_Base, CPubdesc_Base, CAnnotdesc_Base, CProject_descr_Base, CPC_Urn_Base, CPC_DBTracking_Base, CPC_ResultType_Base, CPC_AssayTargetInfo_Base, CPC_AssayPanelMember_Base, CPC_AssayPanel_Base, CPC_AssayDescription_Base, CNameValue_Base, CMSScoreSet_Base, CMSModSpec_Base, CPrintTemplate_Base, CColor_prop_Base, CBiostruc_feature_set_descr_Base, CBiostruc_feature_Base, CModel_descr_Base, CConformation_ensemble_Base, CResidue_Base, CBiostruc_descr_Base, CBiomol_descr_Base, CAtom_Base, CMim_author_Base, CMim_allelic_variant_Base, CMedline_rn_Base, CINSDTag_Base, CINSDQualifier_Base, CID2_Reply_Get_Package_Base, CID2_Param_Base, CGC_Replicon_Base, CGC_Assembly_Base, CPerson_id_Base, CGBTag_Base, CGBQualifier_Base, CComponent_Base::C_Attlist, CAssay_Base::C_Method::C_EMethod::C_Attlist, CCn3d_user_annotation_Base, CCn3d_style_settings_Base, CSeqTree_node_Base, CCdd_tree_Base, CCdd_Script_Base, CCdd_Base, CBlast4_task_info_Base, CBlast4_parameter_info_Base, CBlast4_parameter_Base, CBlast4_matrix_id_Base, CBlast4_database_Base, CFeatureDescr_Base, CTitle_Base::C_E, CAuthor_Base, CTempTrackProxy, CHistogramGlyph, CTemplateScoringMethod, CLDBlockGlyph, CLDBlockDS, CSGHapmapDS, CGwasGlyph, CSGGapDS, CBinsGlyph, CBinsDS, ITemplateUITool, CLayoutHistogram, CFilter, CPluginArg_Base, CWorkspaceFolderPrx, CWorkspacePrx, CProjectItemPrx, CProjectFolderPrx, CProjectPrx, CFormArgDesc, CBDB_Field, CVisualStudioProject_Base::C_Attlist, CTool_Base::C_Attlist, CPlatform_Base::C_Attlist, CFilter_Base::C_Attlist, CFileConfiguration_Base::C_Attlist, CConfiguration_Base::C_Attlist, CREnzyme, CUserParam_Base::C_Attlist, CSourceFile_Base::C_Attlist, CSoftwareParam_Base::C_Attlist, CSample_Base::C_Attlist, CCvParam_Base::C_Attlist, CUserParam_Base::C_Attlist, CSoftware_Base, CCvParam_Base::C_Attlist, CContact_Base
• SetName_of_database() : CBiostruc_source_Base
• SetNameAbbr() : CProvider_Base
• SetNameAttribute() : CHTMLNode
• SetNamed() : DTDElement, CAnnotName, CSeqEdit_Cmd_ReplaceAnnot_Base, CSeqEdit_Cmd_RemoveAnnot_Base, CSeqEdit_Cmd_AddAnnot_Base
• SetNamed_annot_track() : CSeq_id_Base
• SetNamedhybrid() : COrgName_Base::C_Name
• SetNamedScore() : CSeq_align
• SetNameFeatSet() : CGffLoadParams
• SetNameOfFile() : CSupSourceFile_Base, CSourceFile_Base
• SetNames() : CNum_enum_Base, CID2_Request_Get_Packages_Base, CAuth_list_Base, CFileDeleteList
• SetNamespaceName() : CNamespaceInfoItem, CTypeStrings, CDataType, DTDElement, CTypeInfo, CAnyContentObject, CSerialObject
• SetNamespacePrefix() : CNamespaceInfoItem, CTypeInfo, CAnyContentObject, CSerialObject
• SetNameValidator() : CFolderEditDlg
• SetNamevalue() : CMSSpectrum_Base, CMSHitSet_Base
• SetNanoSecond() : CTime
• SetNativeID() : CSpectrum_Base::C_Attlist, CChromatogram_Base::C_Attlist
• SetNblocks() : CCoreDef_Base
• SetNcbi() : CAnnot_id_Base
• SetNcbi2na() : CSeq_data_Base
• SetNcbi4na() : CSeq_data_Base
• SetNcbi8aa() : CTrna_ext_Base::C_Aa, CGenetic_code_Base::C_E, CCode_break_Base::C_Aa, CSeq_data_Base
• SetNcbi8na() : CSeq_data_Base
• SetNcbiCoding() : CSeqVector
• SetNcbieaa() : CTrna_ext_Base::C_Aa, CGenetic_code_Base::C_E, CCode_break_Base::C_Aa, CSeq_data_Base
• SetNcbipaa() : CSeq_data_Base
• SetNcbipna() : CSeq_data_Base
• SetNcbipnaToNcbi4naScore() : oligofar::CQueryHash
• SetNcbiqnaToNcbi4naScore() : oligofar::CQueryHash
• SetNcbistdaa() : CTrna_ext_Base::C_Aa, CGenetic_code_Base::C_E, CCode_break_Base::C_Aa, CSeq_data_Base
• SetNcolumns() : CMatrix_Base
• SetNearPlane() : CGlCamera
• SetNeedLabel() : CLayoutAlign
• SetNeedPeriod() : CCommentItem
• SetNeedUpdateSelection() : CSeqGraphicRenderer
• SetNegativeFlag() : CArgDesc_Alias
• SetNegativeGIList() : CRemoteBlast
• SetNegativeGiListLimitation() : CSearchDatabase
• SetNeighbors() : CMim_text_Base, CCdd_tree_Base, CCdd_Base
• SetNelements() : CTriangle_Base
• SetNetCacheCompatMode() : SNetServerMultilineCmdOutputImpl
• SetNeutralloss() : CMSModSpec_Base, CMSIon_Base
• SetNeverTranslateCDS() : CFlatFileConfig
• SetNew_composite_view() : CPluginReplyAction_Base
• SetNew_view() : CPluginReplyAction_Base
• SetNewBuffer() : CUTTPReader
• SetNewConnectionDelayMicroSec() : CReader
• SetNext() : oligofar::CHit::C_NextCtl
• SetNL() : CHTMLHelper
• SetNMethionine() : CCleave
• SetNmethionine() : CMSSearchSettings_Base
• SetNo_contents() : CID2_Request_Get_Packages_Base
• SetNo_filtering() : CBlast4_common_options_query_filtering_Base
• SetNoAmbiguities() : CSeqVector_CI, CSeqVector
• SetNoBlob() : CReaderRequestResult
• SetNocorrelationscore() : CMSSearchSettings_Base
• SetNode() : CHG_Entry_Base
• SetNodeAddr() : CJobRun
• SetNodeColor() : IPhyGraphicsNode
• SetNodeId() : CJobRun, CBioTree< TBioNode >
• SetNodePort() : CJobRun
• SetNodes() : CBioTreeContainer_Base
• SetNodeShape() : IPhyGraphicsNode
• SetNodeSize() : CGuideTree, CwxPhyloSettingsDlg, IPhyGraphicsNode
• SetNodesNmb() : CPhyTreeNode
• SetNoEncode() : CHTMLPlainText
• SetNoGTF() : CGffLoadParams
• SetNoLink() : CMim_reference_Base
• SetNoMapping() : SAnnotSelector
• SetNon_coding_region() : CGnomon_param_Base::C_Param
• SetNon_std_residue() : CSeqFeatData_Base
• SetNon_unique_keys() : CEntrezgene_Base
• SetNonConsensusIntronCost() : CProSplignScoring
• SetNone() : pythonpp::CError
• SetNonEmpty() : CUniSequenceDataType, CItemInfo
• SetNoPrefix() : CUniSequenceDataType, CDataMember, CVariantInfo, CMemberId, CMemberInfo
• SetNoprolineions() : CMSSearchSettings_Base
• SetNormalize() : CToupper_Base::C_Data, CTolower_Base::C_Data, CSubs_Base::C_E_Subs, CStrip_Base::C_E_Strip, CRule_Base::C_Data, CPad_Base::C_E_Pad, CNormalize_Base::C_Data, CApad_Base::C_E_Apad
• SetNormDone() : CAppJobProgress
• SetNoShade() : CHTML_hr
• SetNot() : CQueryParseNode, CBDB_QueryNode
• SetNotag() : CDataMember, CVariantInfo, CObjectStackFrame, CMemberId, CMemberInfo
• SetNote() : CNode_annotation_Base
• SetNotEmpty() : CSeqDB_IdRemapper
• SetNotificationTimeout() : CWorkerNode
• SetNotNull() : CBDB_Field
• SetNoWrap() : CHTMLOpenElement
• SetNrows() : CMatrix_Base
• SetNSParameters() : CNetScheduleServer
• SetNTermExt() : DistanceMatrix
• setNTermExt() : BlockExtender
• SetNTerminalExt() : CAlgorithm_type_Base
• SetnThreads() : COMSSABase
• SetNuc() : CEntrez_general_Base::C_Data
• SetNuc_acc() : CHG_Gene_Base
• SetNuc_change() : CHG_Stats_Base
• SetNuc_change_jc() : CHG_Stats_Base
• SetNuc_gi() : CHG_Gene_Base
• SetNucent() : CProject_item_Base
• SetNucid() : CProject_item_Base
• SetNucl_query_options() : CBlast4_common_options_Base
• SetNucleotide_backbone() : CCn3d_style_settings_Base
• SetNucleotide_gi() : CPC_XRefData_Base
• SetNucleotide_labels() : CCn3d_style_settings_Base
• SetNucleotide_sidechains() : CCn3d_style_settings_Base
• SetNucleotideBlastDbDataLoader() : CAutoNcbiConfigFile
• SetNucleotideLinks() : CMim_entry_Base
• SetNucpos() : CProduct_pos_Base
• SetNucuid() : CProject_item_Base
• SetNull() : CSeq_loc_Base, CPrintForm_Base, CVariant, CBDB_BufferManager, CBDB_Field
• SetNULL() : CDB_Object
• SetNullable() : CBDB_BufferManager, CBDB_Field
• SetNullBit() : CBDB_BufferManager
• SetNum() : CMSPeakList, CData_set_id_Base, CSeqFeatData_Base, CSeq_map_table_Base, CSeq_code_table_Base, CSeqdesc_Base, CPubdesc_Base, CNum_enum_Base, CTitle_msg_list_Base, CMim_link_Base, CUser_field_Base, CEntrez2_term_list_Base, CEntrez2_id_list_Base, CHsp_Base, CHit_Base, CLink_set_Base
• SetNum3dStructs() : CExchangeSet_Base::C_Summary::C_Attlist
• SetNum_alignments() : CBlast4_phi_alignments_Base
• SetNum_identities() : CBlast4_simple_alignment_Base
• SetNum_indels() : CBlast4_simple_alignment_Base
• SetNum_rows() : CSeq_table_Base
• SetNum_sequences() : CBlast4_database_info_Base
• SetNumAlignToShow() : CShowBlastDefline, CDisplaySeqalign, CAlnGraphic
• SetNumAlleleFreqs() : CExchangeSet_Base::C_Summary::C_Attlist
• SetNumber() : CMSBasicMatchedPeak, CMSPeak, CMSSpectrum_Base, CMSMZHit_Base, CMSHitSet_Base, CMim_reference_Base, CMim_cit_Base, CMim_allelic_variant_Base, CCn3d_backbone_label_style_Base, CPatent_priority_Base, CMeeting_Base, CId_pat_Base::C_Id, CCit_pat_Base, CAcquisition_Base::C_Attlist
• SetNumber_of_coords() : CRegion_coordinates_Base
• SetNumber_of_points() : CTriangles_Base, CT_mesh_Base, CAtomic_coordinates_Base
• SetNumber_of_ptrs() : CResidue_explicit_pntrs_Base, CMolecule_pntrs_Base, CAtom_pntrs_Base
• SetNumber_of_terms() : CEntrez2_term_pos_Base
• SetNumber_of_triangles() : CTriangles_Base
• SetNumberOfDeletions() : CMapLoc_Base::C_Attlist
• SetNumberOfInsertions() : CMapLoc_Base::C_Attlist
• SetNumberOfMismatches() : CMapLoc_Base::C_Attlist
• SetNumberOfThreads : CSeqDBImpl, CSeqDB, CThreadable, CBlastPrelimSearch, BlastSeqSrc
• SetNumColumns() : CPssm_Base
• SetNumContigHits() : CExchangeSet_Base::C_Summary::C_Attlist
• SetNumeric() : CSeqDBIsam::SIsamKey
• SetNumErrors() : CWigLoadParams, CBedLoadParams
• SetNumexc() : CPubdesc_Base
• setNumFamilies() : AlignmentCollection
• SetNumGeneHits() : CExchangeSet_Base::C_Summary::C_Attlist
• SetNumGeneMaps() : CMim_entry_Base
• SetNumGiHits() : CExchangeSet_Base::C_Summary::C_Attlist
• SetNumLineToShow() : CAlnGraphic
• SetNumMatchingSeqs() : CPssmIntermediateData_Base
• SetNumRelevant() : CMim_link_Base
• SetNumRows() : CPssm_Base
• SetNumRsIds() : CExchangeSet_Base::C_Summary::C_Attlist
• SetNumseg() : CSparse_align_Base, CPacked_seg_Base, CDense_seg_Base
• SetNumSpokes() : CGlTube< Curve >
• SetNumStsHits() : CExchangeSet_Base::C_Summary::C_Attlist
• SetNumThreads() : CIndexedDb
• SetNumUnigeneCids() : CExchangeSet_Base::C_Summary::C_Attlist
• SetNumval() : CSeq_graph_Base
• SetNvalue() : CSeqEdit_Cmd_ReplaceAnnot_Base::C_Data::C_Graph, CSeqEdit_Cmd_ReplaceAnnot_Base::C_Data::C_Align, CSeqEdit_Cmd_ReplaceAnnot_Base::C_Data::C_Feat
• SetO() : CAtomic_occupancies_Base
• SetObj() : CSeqEdit_Cmd_AddAnnot_Base::C_Search_param
• SetObjaddr() : CPluginObject_Base
• SetObjDesc() : CValidErrItem_Base
• SetObject() : CClassTypeStrings, pythonpp::CError, CUser_field_Base::C_Data, CObjectList, CProjectItem, CPluginValue_Base, CPluginValue, CPluginObject, CPluginArg, CwxObject
• SetObjectField() : CSeqTableSetAnyObjField
• SetObjectFile() : CTool_Base::C_Attlist
• SetObjectList() : CObjectSelector_Base, CObjectListWidget, CObjectListTableModel
• SetObjectManager() : CwxDemoTableCtrlFrame
• SetObjectPointer() : CVariantInfo, CPointerTypeInfo
• SetObjects() : CGffExporter, CGffExportPage, CFlatFileExporter, CFlatFileExportPage, CFastaExporter, CFastaExportPage, CAgpExporter, CAgpExportPage, CPhyExporter, CPhyExportPage, CDotMatrixPanel, CDotMatrixViewManager, CAsnExporter, CUser_field_Base::C_Data, CGlyphContainer, CObjectListWidgetSel, CObjectListWidget, CObjectListTableModel, CWindowMaskerParams, CWindowMaskerPanel, CFastaExportParams, CCleanupParams, CCleanupPanel, CTreeBuilderPanel, CSplignPanel, CFindOverlapPanel, IUIExportTool, CProjectSelectorDlg, CConversionResultPanel, CParamsPanel, CAsnExportParams
• SetObjectSelection() : CCrossAlnRenderer, CCrossAlnPane, CTaxTreeBrowser, CHitMatrixWidget, CHitMatrixPane, CCrossPanelIR, CCrossAlnWidget
• SetObjectSelector() : CLink_Base::C_Selector
• SetObjectSpace() : CSeqGraphicConfig
• SetObjectType() : CFormArgDesc
• SetObjectUrl() : CLink_Base
• SetObjId() : CObjectList_Base::C_Data
• SetObjUrl() : CIdUrlSet_Base::C_Data
• SetObserved() : CSs_Base::C_Sequence, CRs_Base::C_Sequence
• SetOccupancies() : CAtomic_coordinates_Base
• SetOccupancy_factor_units() : CModel_space_Base
• SetOccurrence() : DTDElement
• SetOctahedral() : CPC_StereoCenter_Base
• SetOffDiagonalRange() : CBlastOptionsLocal, CBlastOptionsHandle, CBlastOptions
• SetOffset() : CUTTPReader, CGraphRanges, CID2_Request_ReGet_Blob_Base, CID2_Reply_ReGet_Blob_Base, CSupDataArray_Base::C_Attlist
• SetOffset_UIDs() : CEntrez2_limits_Base
• SetOffsetRanges() : CSeqDBVol, CSeqDBImpl, CSeqDB
• SetOID() : CBlastDBSeqId
• SetOid() : oligofar::CSeqIds::CSeqDef, CMSPepHit_Base, CMSHits_Base, CMSBioseq_Base
• SetOids() : COMSSASearch
• SetOidSet() : CSearch< LEGACY, NHITS >
• SetOld_root() : CCdd_descr_Base
• SetOldFeaturesOrder() : CFlatFileConfig
• SetOldPostFormat() : CDiagContext
• SetOldRoot() : CCdCore
• SetOmitFramePointers() : CTool_Base::C_Attlist
• SetOmitScopePrefixes() : CSoapServerApplication, CSoapHttpClient
• SetOname() : CTaxon1_name_Base
• SetOne_letter() : CSeq_code_table_Base
• SetOnFailure() : CTextFsm< MatchType >::CState
• SetOnlyGeneRIFs() : CFlatFileConfig
• SetOnlyNearFeatures() : CFlatFileConfig
• SetOP() : CTranslationStack_Base::C_Data
• SetOp() : CEntrez2_boolean_element_Base
• SetOpen() : COpenRange< Position >, CFolderInfo_Base
• SetOpenTimeout() : CReaderServiceConnector
• SetOperand() : CMath_Base
• SetOperation() : COperand_Base::C_Attlist
• SetOperator() : CINSDFeature_Base, CGBFeature_Base
• SetOptimalSize() : CNCMMDBCache, CNCMMDBPagesHash
• SetOptimization() : CTool_Base::C_Attlist
• SetOptimizeForProcessor() : CTool_Base::C_Attlist
• SetOptimizeReferences() : CTool_Base::C_Attlist
• SetOption() : CShowBlastDefline
• SetOptional() : CDataMember, CMemberInfo, CNCBINode::SAttributeValue, CPluginArg_Base
• SetOptional_nodes() : CCdd_pref_nodes_Base
• SetOptionalAttribute() : CNCBINode
• SetOptionalFlag() : CFormArgDesc
• SetOptionaltags() : CINSDTagsetRules_Base, CGBTagsetRules_Base
• setOptions() : PssmMaker
• SetOptions() : CAlnMrgApp, CPageHandler, BlockAligner, CBlast4_options_lite_Base, CBlast4_queue_search_request_lite_Base, CSimpleScoringMethod, CQualityScoringMethod, CAlnMultiDSBuilder, CVectorOutput< T >, CPostscript, CPdf, COutput, CDataLoadingAppJob, CdPssmInput, BMARefinerInterface, CCompareSeqRegions, CBlastAppArgs, ISearch, CRemotePssmSearch, CRemoteSeqSearch, CLocalPssmSearch, CLocalSeqSearch, CBlastOptionsHandle
• SetOptions_id() : CViewMemento_Base
• SetOptionsHandle() : CBlastAppArgs, CBl2Seq
• SetOptOut() : WizardPage
• SetOrder() : CPC_Bonds_Base, CSource_Base::C_Attlist, CProcessingMethod_Base::C_Attlist, CDetector_Base::C_Attlist, CAnalyzer_Base::C_Attlist, CMarkov_chain_params_Base
• SetOrdered() : CGC_Sequence_Base
• SetOrdered_scaf() : CGC_SequenceStats_Base
• SetOrf() : CCdregion_Base
• SetOrfSeqColor() : CTranslationConfig
• SetOrg() : CT3Request_Base, CT3Error_Base, CT3Data_Base, CTaxon2_data_Base, CTaxon1_data_Base, CSeqFeatData_Base, CBioSource_Base, CSeqdesc_Base
• SetOrganism() : CPC_AssayTargetInfo_Base, CBiomol_descr_Base, CINSDSeq_Base, CGBSeq_Base, CExchangeSet_Base::C_SourceDatabase::C_Attlist, CAssay_Base::C_Taxonomy::C_Attlist, CBlast4_common_options_db_restriction_Base
• SetOrganism_restriction() : CBlast4_common_options_db_restriction_by_organism_Base
• SetOrganism_taxid() : CBlast4_common_options_repeats_filtering_Base
• SetOrgmod_changed() : CT3RefreshFlags_Base
• SetOrgModType() : CAutoDefAvailableModifier
• SetOrgname() : CTSeq_Base, COrg_ref_Base
• SetOrient() : CSs_Base::C_Attlist, CMapLoc_Base::C_Attlist
• SetOrientation() : CComponent_Base::C_Attlist, CSeqMarkHandler, CLinearSelHandler, CBookmarksHandler
• SetOrientFlip() : CRs_Base::C_E_MergeHistory::C_Attlist
• SetOrig_message() : CGBProject_ver2_Base, CGBProject_Base
• SetOrigin() : CBioSource_Base, CGB_block_Base
• SetOriginType() : CGlPane
• SetOrigNumber() : CMim_reference_Base
• SetOrigParams() : CwxScoreDlg
• SetOrtho() : CGl3dWindow
• SetOs() : CUser_field_Base::C_Data
• SetOs_ver() : CGBenchVersionInfo_Base
• SetOs_ver_string() : CGBenchVersionInfo_Base
• SetOss() : CUser_field_Base::C_Data
• SetOther() : CSeq_id_Base, CAnnot_id_Base, CArticleId_Base, CProjectItem_Base::C_Item
• SetOther_comment() : CBiostruc_feature_set_descr_Base, CModel_descr_Base, CBiostruc_descr_Base, CBiomol_descr_Base
• SetOther_commentaries() : CHG_Commentary_Base
• SetOther_database() : CBiostruc_id_Base
• SetOther_fields() : CDependent_field_rule_Base
• SetOther_info() : CBlast_def_line_Base
• SetOther_links() : CHG_Commentary_Base
• SetOther_score() : CAlign_stats_Base
• SetOther_seqids() : CINSDSeq_Base, CGBSeq_Base
• SetOther_sequences() : CGC_Scaf_stats_Base::C_Composition
• SetOtherAuthors() : CMim_reference_Base
• SetOtherid() : CHG_Gene_Base
• SetOthername() : CCdd_descr_Base
• SetOtherPopBatchId() : CRs_Base::C_Validation
• SetOthers() : CMim_cit_Base
• SetOthersettings() : CMSSearchSettings_Base
• SetOutcome() : CPC_AssayResults_Base
• SetOutFile() : COMSSABase, CBDB_FileDumper
• SetOutfile() : CMSOutFile_Base
• SetOutfiles() : CMSSearchSettings_Base
• SetOutfiletype() : CMSOutFile_Base
• SetOutOfFrameMode() : CBlastOptionsLocal, CTBlastnOptionsHandle, CBlastxOptionsHandle, CBlastOptions
• SetOutpmid() : CMla_back_Base
• SetOutput() : CJob, CCgiResponse, CTool_Base::C_Attlist
• SetOutput_data() : CSeq_test_result_Base
• SetOutput_file() : CPluginValue_Base
• SetOutputDirectory() : CTool_Base::C_Attlist, CConfiguration_Base::C_Attlist
• SetOutputFile() : CPluginArg, CTool_Base::C_Attlist
• SetOutputFormat() : CNcbiBoostLogger, CNcbiBoostReporter, CPrintOptions
• SetOutputFormatter() : oligofar::CFilter, oligofar::CBatch
• SetOutputParam() : CCallableStatement, ICallableStatement
• SetOutputs() : CTool_Base::C_Attlist
• setoutputsize() : python::CCursor
• SetOutputStream() : CPdfObjectWriter, CVectorPrinter, CPdf
• SetOutuid() : CMla_back_Base
• SetOvalue() : CSeqEdit_Cmd_ReplaceAnnot_Base::C_Data::C_Graph, CSeqEdit_Cmd_ReplaceAnnot_Base::C_Data::C_Align, CSeqEdit_Cmd_ReplaceAnnot_Base::C_Data::C_Feat
• SetOverflowLimit() : CBDB_Cache
• SetOverlapIntervals() : SAnnotSelector
• SetOverlapTotalRange() : SAnnotSelector
• SetOverlapType() : SAnnotSelector
• SetOverviewCutoff() : CSeqGraphicConfig, CRenderingContext
• SetOwner() : CDirEntry
• SetOwner_id() : CContact_info_Base
• SetOwnership() : CFileDiagHandler, CListeningSocket, CSocket
• SetP() : CLength_distribution_params_Base
• SetP_m() : CInt_fuzz_Base
• SetPackable() : CBDB_BufferManager
• SetPackage() : CGBenchVersionReply_Base
• SetPackagesToLoad() : CPkgManager
• SetPacked() : CSeq_align_Base::C_Segs
• SetPacked_int() : CSeq_loc_Base
• SetPacked_pnt() : CSeq_loc_Base
• SetPacketSize() : CODBCContext
• SetPad() : CToupper_Base::C_Data, CTolower_Base::C_Data, CSubs_Base::C_E_Subs, CStrip_Base::C_E_Strip, CRule_Base::C_Data, CPad_Base, CPad_Base::C_E_Pad, CNormalize_Base::C_Data, CApad_Base::C_E_Apad
• SetPageOrientation() : CPrintOptions
• SetPages() : CMim_reference_Base, CImprint_Base, CCit_gen_Base
• SetPageSize() : CSQLITE_Connection, CBDB_RawFile
• SetPagesTall() : CPrintOptions
• SetPageStat() : CHTMLBasicPage
• SetPagesWide() : CPrintOptions
• SetPairMargin() : CPassParam
• SetPairmate() : oligofar::CHit
• SetPairwiseAlns() : CAnchoredAln
• SetPamlCounter() : CPhyTreeNode
• SetPane() : CLayoutTrackHandler, IPhyloTreeRenderer, CHitMatrixGraph, CTooltipHandler, CSeqMarkHandler, CMouseZoomHandler, CMinimapHandler, CLinearSelHandler, CLegendHandler, IGlEventHandler, CGraphContainer, CBookmarksHandler, CSelListController< Item >, CAlnMultiPane, CAlnMultiHeaderHandler, CAlignMarkHandler
• SetPanel_info() : CPC_ResultType_Base, CPC_AssayDescription_Base
• SetParam() : CStatement, python::CCallableStmtHelper, python::CStmtHelper, CCursor, CCallableStatement, oligofar::CQueryHash, CGBDataLoader, CBlastOutput_Base, impl::CDB_Params, CDB_RPCCmd, CDB_LangCmd, CDBDefaultConnParams, CDBConnParamsBase, impl::CDBConnParamsBase, ICursor, ICallableStatement, IStatement, CGnomon_param_Base
• setParam() : CSeqMaskerOstat
• SetParameters() : CQueue, CPC_Urn_Base, CServer, CCdFromFasta
• SetParamFields() : SJS_Request
• SetParams() : CAlignNeedlemanWunschPanel, CPssmWithParameters_Base, CID2_Request_Base, CID2_Reply_Get_Package_Base, CID2_Reply_Base, CBlast4_finish_params_request_Base, CwxPhyloSettingsDlg, CwxPhyloEditDlg, CwxLabelEditDlg, IHitMatrixDataSource, CGradientPanel, CHitMatrixDataSource, CBuildOptionsDlg, CAlnPropertiesDlg, CAutodefParamsPanel, CMergeAlignmentsParamsPanel, CGroupAlignmentsParamsPanel, CCreateGeneModelParamsPanel, CCleanupAlignmentsParamsPanel, CBLASTSearchParamsPanel, CBLASTSearchOptionsPanel, CSaveDlg, CProjectSelectorPanel, CThreadedServer, TKmerMethods< TKmerCounts >
• SetParamset() : CBlast4_finish_params_request_Base, CBlast4_queue_search_request_Base
• SetParamTree() : CGBLoaderParams
• SetParent() : CDataType, CMSImmonium_Base, CCdd_tree_Base, CCdd_Base, CNode_Base, CSeqGlyph, mu::ParserTokenReader, CLayoutObject, CTreeNode< TValue, TKeyGetter >
• SetParent_tax_id() : CCdd_org_ref_Base
• SetParent_type() : CDomain_parent_Base
• SetParentClass() : CClassCode, CClassTypeStrings, CMemberInfo, CClassTypeInfo
• SetParentClassTo() : CDataType
• SetParentEntry() : CSeq_entry, CBioseq_set, CBioseq
• SetParentFolder() : CWorkspaceFolder, CProjectItem, CProjectFolder, CGBProjectHandle
• SetParentid() : CDomain_parent_Base
• SetParents() : CReadBlastApp
• SetParents_persist() : CEntrez2_get_links_Base
• SetParentTag() : CMemberId
• SetParentTrack() : CLayoutTrack
• SetParentTree() : CBioTree< TBioNode >, CBioTree< TBioNode >::CBioNode
• SetParentWindow() : CGwasTrackLoadManager, CWigLoadManager, CGffLoadManager, CGffExporter, CFlatFileExporter, CFASTAFormatLoadManager, CFastaExporter, CBedLoadManager, CAgpLoader, CAgpExporter, CPhyLoader, CPhyExporter, CAsnExporter, CGenBankUILoadManager, CNetBLASTUILoadManager, CBLASTToolManagerBase, IUIToolManager, CWorkspaceFormatLoadManager, CProjectFormatLoadManager, CProjectLoadManager, CFileLoadManager, COpenViewManager, IOpenViewManager, CFileAutoLoader, CASNFormatLoadManager, CAlgoToolManagerBase
• SetParity() : CPC_StereoTetrahedral_Base, CPC_StereoSquarePlanar_Base, CPC_StereoPlanar_Base
• SetParseAllIDs() : CFastaLoadParams
• SetParseIDs() : CAgpLoadParams
• SetParseLocalIds() : CBlastTabularInfo
• SetParser() : AbstractLexer
• SetParserTolerance() : CQueryParserEnv
• SetParseSeqIds() : CGffLoadParams
• SetPart() : CPRF_ExtraSrc_Base
• SetPart_sup() : CImprint_Base
• SetPart_supi() : CImprint_Base
• SetPartial() : SAnnotObject_Index, CAnnotMapping_Info, CSeq_feat_Base, COrgName_Base::C_Name, CSpliced_exon_Base, CGC_Assembly_Base
• SetPartial3() : CINSDFeature_Base, CGBFeature_Base
• SetPartial5() : CINSDFeature_Base, CGBFeature_Base
• SetPartialName() : COrgRefCache
• SetPartialStart() : CSeq_point, CSeq_loc_mix, CSeq_loc, CSeq_interval, CPacked_seqpnt, CPacked_seqint
• SetPartialStop() : CSeq_point, CSeq_loc_mix, CSeq_loc, CSeq_interval, CPacked_seqpnt, CPacked_seqint
• SetParts() : CSpliced_exon_Base, CGC_Genome_Base
• SetPass() : oligofar::CBatch
• SetPassParam() : oligofar::CBatch
• SetPassword() : CContact_info_Base, CDB_ODBC_ConnParams, CDBUriConnParams, CDBConnParamsBase, impl::CDBConnParamsBase, CUrl
• SetPasswordEnv() : CDBEnvConnParams
• SetPat_id() : CPub_Base
• SetPatent() : CSeq_id_Base, CPub_set_Base, CPub_Base
• SetPath() : CPluginIconInfo_Base, CCgiCookie, CUrl
• SetPathCopyHook() : CTypeInfo, CObjectTypeInfoCV, CObjectTypeInfoVI, CObjectTypeInfoMI, CObjectTypeInfo, CVariantInfo, CMemberInfo
• SetPathCopyMemberHook() : CObjectStreamCopier
• SetPathCopyObjectHook() : CObjectStreamCopier
• SetPathCopyVariantHook() : CObjectStreamCopier
• SetPathHook() : CHookData< Hook, Function >, CHookDataBase
• SetPathHooks() : CObjectStreamCopier
• SetPathReadHook() : CTypeInfo, CObjectTypeInfoCV, CObjectTypeInfoVI, CObjectTypeInfoMI, CObjectTypeInfo, CVariantInfo, CMemberInfo
• SetPathReadMemberHook() : CObjectIStream
• SetPathReadObjectHook() : CObjectIStream
• SetPathReadVariantHook() : CObjectIStream
• SetPathSkipHook() : CTypeInfo, CObjectTypeInfoVI, CObjectTypeInfoMI, CObjectTypeInfo, CVariantInfo, CMemberInfo
• SetPathSkipMemberHook() : CObjectIStream
• SetPathSkipObjectHook() : CObjectIStream
• SetPathSkipVariantHook() : CObjectIStream
• SetPathToFile() : CSupSourceFile_Base, CSourceFile_Base
• SetPathValues() : CInstancedAligner
• SetPathWriteHook() : CTypeInfo, CObjectTypeInfoCV, CObjectTypeInfoVI, CObjectTypeInfoMI, CObjectTypeInfo, CVariantInfo, CMemberInfo
• SetPathWriteMemberHook() : CObjectOStream
• SetPathWriteObjectHook() : CObjectOStream
• SetPathWriteVariantHook() : CObjectOStream
• SetPattern() : CParameters_Base, CNWAligner
• SetPattern_from() : CHsp_Base
• SetPattern_to() : CHsp_Base
• SetPaup() : CAlnReader
• SetPause() : CBiostruc_script_step_Base
• SetPchHeader() : CFileCode
• SetPcr_primers() : CBioSource_Base
• SetPct() : CInt_fuzz_Base
• SetPctCompleted() : IReporter
• SetPdb() : CSeq_id_Base, CSeqdesc_Base
• SetPdb_class() : CBiomol_descr_Base
• SetPdb_comment() : CBiostruc_feature_set_descr_Base, CModel_descr_Base, CBiostruc_descr_Base, CBiomol_descr_Base
• SetPdb_method() : CModel_descr_Base
• SetPdb_reso() : CModel_descr_Base
• SetPdb_source() : CBiomol_descr_Base
• SetPeakLists() : CMSPeak
• SetPenalty() : CElementaryMatching, CCompartmentFinder< THit >
• SetPenaltyLimit() : oligofar::IAligner, oligofar::CAligner
• SetPending() : CCdd_Base
• SetPentagonal() : CPC_StereoCenter_Base
• SetPephits() : CMSHits_Base
• SetPepstart() : CMSPepHit_Base, CMSHits_Base
• SetPepstop() : CMSPepHit_Base, CMSHits_Base
• SetPepstring() : CMSHits_Base
• SetPeptidesExamined() : CMSPeak
• SetPeptol() : CMSSearchSettings_Base
• SetPercent_identity() : CBlast4_common_options_Base
• SetPercentIdentity() : CBlastOptionsLocal, CBlastOptionsHandle, CBlastOptions
• SetPercIdThreshold() : CSimpleB2SWrapper
• SetPermanentConnection() : CNetService
• SetPermutator() : oligofar::CHashPopulator
• SetPerspective() : CGl3dWindow
• SetPhase_probabilities() : CIntron_params_Base
• SetPhi_alignments() : CBlast4_get_search_results_reply_Base
• SetPhi_pattern() : CBlast4_common_options_Base
• SetPHIPattern() : CBlastOptionsLocal, CPHIBlastProtOptionsHandle, CPHIBlastNuclOptionsHandle, CBlastOptions
• SetPhone() : CContact_info_Base, CAffil_Base::C_Std
• SetPhrapCutoff() : CPassParam, CHashParam
• SetPhylip() : CAlnReader
• SetPhysMapInt() : CMapLoc_Base::C_Attlist
• SetPig() : CWriteDB_Impl, CWriteDB
• SetPii() : CArticleId_Base
• SetPir() : CSeq_id_Base, CSeqdesc_Base
• SetPlace() : CMim_reference_Base, CMeeting_Base
• SetPlacedContigCount() : CAssembly_Base::C_SnpStat::C_Attlist
• SetPlacement() : CPIR_block_Base
• SetPlacement_method() : CClone_ref_Base
• SetPlainSeparators() : CHTML_table
• SetPlanar() : CPC_StereoCenter_Base
• SetPlasnm() : CSP_block_Base
• SetPlatform() : CPlatforms_Base, CPlatform_Base
• SetPlatforms() : CVisualStudioProject_Base
• SetPlugin() : CProjectItem_Base::C_Item, CDataHandleViewer_Base, CDataHandleTransformer_Base
• SetPlugin_cmd_run() : CPluginReplyAction_Base
• SetPlugin_message() : CGBenchToolResults_Base
• SetPlugin_param() : CGBProject_ver2_Base, CGBProject_Base
• SetPlusCuts() : CRSpec, CRSite
• SetPlusone() : CMSChargeHandle_Base
• SetPlusOne() : CMSPeak
• SetPlusStrand() : IBlastSeqVector
• SetPmcid() : CArticleId_Base
• SetPmcpid() : CArticleId_Base
• SetPment() : CProject_item_Base
• SetPmid() : CPubmed_entry_Base, CPub_Base, CProject_item_Base, CPC_XRefData_Base, CMedline_entry_Base, CMedlars_entry_Base, CCit_gen_Base, CProjectItem_Base::C_Item
• SetPmidtouid() : CMla_request_Base
• SetPmpid() : CArticleId_Base
• SetPmuid() : CProject_item_Base
• SetPnt() : CSeq_loc_Base
• SetPoint() : CSeq_point_Base, CINSDInterval_Base, CGBInterval_Base, CCurveCubic, CCurveBezier, ICurve, CGlTube< Curve >, CGlCurve< Curve >
• SetPointedObject() : CObjectInfo
• SetPointer() : CVariantInfo, CPointerTypeInfo
• SetPointerType() : CChoicePointerTypeInfo
• SetPoints() : CPacked_seqpnt_Base
• SetPoissonOnly() : CSearch< LEGACY, NHITS >
• SetPoly_a() : CSpliced_seg_Base, CPubdesc_Base
• SetPolyADetect() : CSplignParams
• SetPolyaDetection() : CSplign
• SetPool() : CNCMMBlocksSet, CIgapIntronChain
• SetPopulation() : CAssay_Base::C_Attlist
• SetPopupMenuItems() : CPhyloTreeWidget
• SetPort() : CQueueWorkerNodeList, CQueue, CDBDefaultConnParams, CDBConnParamsBase, impl::CDBConnParamsBase, CUrl
• SetPortLimits() : CPhyloTreeWidget, CAlnMultiModel
• SetPos() : CLDS_IStreamCache::CIStream, CSeqVector_CI, CEntrez2_term_list_Base, CSeqGlyph
• SetPosfreq() : CCdd_Base
• SetPosition() : SSeqMapSelector, CINSDReference_Base, CGBReference_Base, CTextItem, ITextItem, CGlyph, CExpandItem, CCompositeTextItem, CCommentGlyph, CGlLight, CBDB_ResultStore< TBV >::CResultStoreEnumerator, CCgiEntry
• SetPositionalMode() : CArgDescriptions
• SetPositionString() : CSequenceGotoEvent, CSequenceGotoData
• SetPositionType() : CAxisRenderer
• SetPositive() : CHsp_Base
• SetPositivesAsMatches() : CNWAligner
• SetPossibleSites() : CREnzResult
• SetPost_text() : COther_source_Base
• SetPostal_code() : CAffil_Base::C_Std
• SetPostCallback() : CEventHandler
• SetPostReadFunction() : CClassTypeInfoBase
• SetPostWriteFunction() : CClassTypeInfoBase
• SetPre_draft() : CGC_Scaf_stats_Base::C_Composition
• SetPre_text() : COther_source_Base
• SetPreallocSz() : oligofar::CWordHash
• SetPrecision() : CData_Base::C_Attlist
• SetPrecompiledHeaderFile() : CTool_Base::C_Attlist
• SetPrecompiledHeaderThrough() : CTool_Base::C_Attlist
• SetPrecursor() : CPrecursorList_Base
• SetPrecursorcull() : CMSSearchSettings_Base
• SetPrecursorDelta() : CMod
• SetPrecursorList() : CSpectrumDescription_Base, CSpectrumDesc_Base
• SetPrecursormz() : CMSSpectrum_Base
• SetPrecursorsearchtype() : CMSSearchSettings_Base
• SetPrecursorTol() : CMSPeak
• SetPreference() : CDBUDPriorityMapper, CDBUDRandomMapper, CDBServiceMapperCoR, CDBDefaultServiceMapper, IDBServiceMapper
• SetPreferred_nodes() : CCdd_pref_nodes_Base
• SetPreferredFavoriteStyle() : StructureWindow
• SetPrefilter() : oligofar::CFilter
• SetPrefix() : CSeqIdGenerator, CComment_rule_Base, CPrintFormat_Base, CStackTrace
• SetPreopenConnection() : CReader, CGBLoaderParams
• SetPreprocessorDefinitions() : CTool_Base::C_Attlist
• SetPrepub() : CImprint_Base
• SetPreReadFunction() : CClassTypeInfoBase
• SetPresearch() : CMSLibrarySettings_Base
• SetPresent() : CPacked_seg_Base
• SetPresentInChildCD() : CNode_annotation_Base
• SetPrev_order() : CMarkov_chain_params_Base::C_E_Probabilities
• SetPreWriteFunction() : CClassTypeInfoBase
• SetPrf() : CSeq_id_Base, CSeqdesc_Base
• SetPrimary() : CINSDSeq_Base, CGBSeq_Base
• SetPrimary_accession() : CINSDSeq_Base, CGBSeq_Base
• SetPrimaryAuthor() : CMim_reference_Base
• SetPrimaryInputType() : CProjectViewTypeDescriptor
• SetPrimarySequence() : CRs_Base
• SetPrimitiveValueAnyContent() : CObjectInfo
• SetPrimitiveValueBitString() : CObjectInfo
• SetPrimitiveValueBool() : CObjectInfo
• SetPrimitiveValueChar() : CObjectInfo
• SetPrimitiveValueDouble() : CObjectInfo
• SetPrimitiveValueInt() : CObjectInfo
• SetPrimitiveValueInt4() : CObjectInfo
• SetPrimitiveValueInt8() : CObjectInfo
• SetPrimitiveValueLong() : CObjectInfo
• SetPrimitiveValueOctetString() : CObjectInfo
• SetPrimitiveValueString() : CObjectInfo
• SetPrimitiveValueUInt() : CObjectInfo
• SetPrimitiveValueUint4() : CObjectInfo
• SetPrimitiveValueUint8() : CObjectInfo
• SetPrimitiveValueULong() : CObjectInfo
• SetPrintContext() : CVectorPrinter
• SetPrintDebug() : oligofar::CAlignerBase
• SetPrintfunc() : CUserFormat_Base
• SetPrintOutput() : CPrintOptions
• SetPrintSeverity() : CDiagCollectGuard
• SetPriority() : CCit_pat_Base
• SetProbabilities() : CMarkov_chain_params_Base
• SetProbe() : CPC_XRefData_Base
• SetProbfollowingion() : CMSSearchSettings_Base
• SetProblemDescr() : WizardPage2
• SetProc() : CPub_set_Base, CPub_Base, CCit_art_Base::C_From
• SetProcessed() : CProt_ref_Base
• SetProcessingMethod() : CDataProcessing_Base
• SetProdlesspre() : CMSChargeHandle_Base
• SetProduct() : CAnnotMapping_Info, CSeq_feat_Base, CRNA_gen_Base, CMSImmonium_Base
• SetProduct_end() : CSpliced_exon_Base
• SetProduct_id() : CSpliced_seg_Base, CSpliced_exon_Base
• SetProduct_ins() : CSpliced_exon_chunk_Base
• SetProduct_length() : CSpliced_seg_Base
• SetProduct_start() : CSpliced_exon_Base
• SetProduct_strand() : CSpliced_seg_Base, CSpliced_exon_Base
• SetProduct_type() : CSpliced_seg_Base
• SetProductDelta() : CMod
• SetProductFlag() : CAutoDef
• SetProductName() : CAutoDefFeatureClause_Base
• SetProducts() : CGene_commentary_Base
• SetProductsearchtype() : CMSSearchSettings_Base
• SetProfile() : CLayoutTrack
• SetProfile_range() : CCdd_Base
• SetProgram() : CBlastOptionsLocal, CBlastOutput_Base, CBlast4_get_request_info_reply_Base, CBlast4_finish_params_request_Base, CBlast4_queue_search_request_Base, CBlast4_program_info_Base, CBlastOptions
• SetProgram_options() : CBlast4_get_request_info_reply_Base, CBlast4_queue_search_request_Base
• SetProgramDatabaseFile() : CTool_Base::C_Attlist
• SetProgramDataBaseFileName() : CTool_Base::C_Attlist
• SetProgramDisplayName() : CNcbiApplication
• SetProgramName() : CNcbiArguments
• SetProgramVersion() : CNetScheduleAPI
• SetProgress() : CPrefetchRequest
• SetProgressCallback() : CValidError_imp, CValidator, CNWAligner
• SetProgressMsg() : CJob
• SetProj() : CProject_item_Base
• SetProject() : CINSDSeq_Base, CGBSeq_Base, CPluginValue_Base, CPluginValue, CPluginObject, CPluginArg, CGBProjectHandle
• SetProject_category() : CPC_AssayDescription_Base
• SetProject_id() : CGC_Project_Base
• SetProject_item_id() : CViewDataLink_Base
• SetProject_item_type() : CPluginValueConstraint_Base
• SetProject_role() : CGC_Project_Base
• SetProject_version() : CGBProject_ver2_Base
• SetProjectGUID() : CVisualStudioProject_Base::C_Attlist
• SetProjection() : CIdDeMux< TBV, TBVFact >
• SetProjectName() : CProjectEditDlg
• SetProjects() : CGC_Genome_Base, CGC_Assembly_Base, CWorkspaceFolder_Base
• SetProjectService() : CSaveDlg, CProjectSelectorPanel, CProjectSelectorDlg
• SetProjectType() : CVisualStudioProject_Base::C_Attlist
• SetProjectViewFactory() : COpenViewManager
• SetProperties() : CGene_commentary_Base, CEntrezgene_Base, CHistogramGraph, CTraceGraph, CFeatureGraph, IAlnVecRowGraph, CAlignRowGraphCont, CAlnVecRow, CGlZoomLens
• SetProperty() : CT3StatusFlags_Base, CCoreBlock_Base, CBiostruc_feature_Base, CRequestContext, CDiagContext
• SetProportionalMode() : CGlPane
• SetProps() : CPC_Compound_Base
• SetProt() : CSeqFeatData_Base, CEntrez_general_Base::C_Data, CEntrezgene_Base
• SetProt_acc() : CHG_Gene_Base
• SetProt_change() : CHG_Stats_Base
• SetProt_gi() : CHG_Gene_Base
• SetProt_len() : CHG_Gene_Base
• SetProt_links() : CHG_Gene_Base
• SetProtAcc() : CRsStruct_Base::C_Attlist, CFxnSet_Base::C_Attlist
• SetProtComplet() : CChainer
• SetProtein() : CTxinit_Base
• SetProtein_backbone() : CCn3d_style_settings_Base
• SetProtein_gi() : CPC_XRefData_Base
• SetProtein_labels() : CCn3d_style_settings_Base
• SetProtein_sidechains() : CCn3d_style_settings_Base
• SetProteinBlastDbDataLoader() : CAutoNcbiConfigFile
• SetProteinLinks() : CMim_entry_Base
• SetProteinScoringMethod() : CSGAlignmentDS
• SetProtent() : CProject_item_Base
• SetProtGi() : CRsStruct_Base::C_Attlist
• SetProtid() : CProject_item_Base
• SetProtlength() : CMSPepHit_Base, CMSHits_Base
• SetProtLoc() : CRsStruct_Base::C_Attlist
• SetProtocol() : CPC_AssayPanelMember_Base, CPC_AssayDescription_Base
• SetProtocolVersion() : CDBDefaultConnParams, CDBConnParamsBase, impl::CDBConnParamsBase
• SetPrototype() : CClusterer::CSingleCluster
• SetPrototypes() : CClusterer
• SetProtpos() : CProduct_pos_Base
• SetProtResidue() : CRsStruct_Base::C_Attlist
• SetProtuid() : CProject_item_Base
• SetProtVer() : CFxnSet_Base::C_Attlist
• SetProtXref() : CSeq_feat_EditHandle, CSeq_feat
• SetProvider() : CObjUrl_Base, CHG_Commentary_Base
• SetProviderId() : CProvider_Base, CLink_Base
• SetProxy() : CMaps_Base::C_Method, CAllOtherFeaturesTrack
• SetPsec_str() : CSeqFeatData_Base
• SetPseudo() : CSeq_feat_Base, CRNA_ref_Base, CGene_ref_Base
• SetPseudoCount() : CBlastOptionsLocal, CPSIBlastOptionsHandle, CBlastOptions
• SetPseudocount() : CPssmParameters_Base, CMSSearchSettings_Base, CMultiAlignerOptions
• SetPsi_ms() : CMSModSpec_Base
• SetPSIBlastDefaults() : CPSIBlastOptionsHandle
• setPsiBlastTarget() : CdBlaster
• SetPSITblastnDefaults() : CPSIBlastOptionsHandle
• SetPssm() : CPsiBlastImpl, CPssmWithParameters_Base, CBlast4_queries_Base, CBlast4_get_search_results_reply_Base, CPsiBlast
• SetPssm_id() : CHG_Domain_Base
• SetPtr() : CVectorWrap< T >
• SetPtrIndex() : CChoicePointerTypeInfo
• SetPub() : CSeqFeatData_Base, CSeqdesc_Base, CPubdesc_Base, CAnnotdesc_Base, CPub_set_Base, CProjdesc_Base, CPC_Substance_Base, CPC_DBTracking_Base, CPC_AssayDescription_Base, CImprint_Base
• SetPub_type() : CMedline_entry_Base
• SetPubDate() : CMim_reference_Base
• SetPubid() : CPubmed_entry_Base
• SetPublic_services() : CGBenchInitReply_Base
• SetPublisher() : CPubmed_entry_Base, CMim_reference_Base
• SetPubmed() : CINSDReference_Base, CGBReference_Base, CArticleId_Base
• SetPubmedUID() : CMim_reference_Base
• SetPubstatus() : CPubStatusDate_Base, CImprint_Base
• SetPurgeBatchSize() : CBDB_Cache
• SetPurged() : oligofar::CHit::C_NextCtl
• SetPvalue() : CMSHits_Base
• SetPythonExeption() : python::CDatabaseError
• SetQseq() : CHsp_Base
• SetQtofscore() : CMSLibrarySettings_Base
• SetQual() : Ctbl_seg, CSeq_feat_Base, CRNA_qual_Base, CGb_qual_Base, CMedline_mesh_Base
• SetQualityChannels() : oligofar::CReaderFactory
• SetQuals() : CFlatFeature, CRNA_gen_Base, CINSDFeature_Base, CGBFeature_Base
• SetQueries() : CBlast4_get_request_info_reply_Base, CBlast4_queue_search_request_Base, CBlast4_get_queries_reply_Base, CMultiAligner, CRemoteBlast, CBl2Seq
• SetQuery() : oligofar::TAlignerBase< CQuery, CSubject >, oligofar::IAligner, oligofar::CAligner, CAlignedGis, CObjectList_Base::C_Data, CESpellResult_Base, CPssmWithParameters, CPssm_Base, CEntrez2_eval_boolean_Base, CEntrez2_boolean_reply_Base, CExchangeSet_Base, CExchangeSet_Base::C_Query, CBlast4_queue_search_request_lite_Base, CBLASTSearchOptionsPanel, CBDB_FileDumper, IPssmSearch, CRemotePssmSearch, CLocalPssmSearch, CBl2Seq, CNgAligner
• SetQuery_def() : CIteration_Base, CBlastOutput_Base
• SetQuery_filtering() : CBlast4_common_options_Base
• SetQuery_frame() : CHsp_Base
• SetQuery_from() : CHsp_Base
• SetQuery_ID() : CIteration_Base, CBlastOutput_Base
• SetQuery_id() : CBlast4_alignments_for_query_Base
• SetQuery_len() : CIteration_Base, CBlastOutput_Base
• SetQuery_mask() : CBlast4_value_Base
• SetQuery_seq() : CBlastOutput_Base
• SetQuery_to() : CHsp_Base
• SetQueryAligned() : oligofar::TAlignerBase< CQuery, CSubject >
• SetQueryAnchor() : oligofar::IAligner, oligofar::CAligner
• SetQueryClause() : CBDB_Query
• SetQueryCoding() : oligofar::IAligner, oligofar::CScoringFactory, oligofar::CAligner
• SetQueryFactory() : ISeqSearch, CRemoteSeqSearch, CLocalSeqSearch
• SetQueryGeneticCode() : CBlastOptionsLocal, CTBlastxOptionsHandle, CBlastxOptionsHandle, CBlastOptions
• SetQueryHash() : oligofar::CSeqScanner, oligofar::CBatch
• SetQueryId() : CBlastTabularInfo, TQueryMessages, CAlignShadow
• SetQueryInfo() : CIndexedDb
• SetQueryKey() : CESearchResult_Base::C_Data::C_Info::C_Content, CEPostResult_Base::C_History, CEUtils_Request, CEUtils_ConnContext
• SetQueryMasks() : CRemoteBlast
• SetQueryMax() : CAlignShadow
• SetQueryMin() : CAlignShadow
• SetQueryNodeId() : CGuideTree
• SetQueryNumber() : CShowBlastDefline, CDisplaySeqalign
• SetQueryOptionDefaults() : CTBlastxOptionsHandle, CRPSTBlastnOptionsHandle, CPSIBlastOptionsHandle, CBlastxOptionsHandle, CBlastRPSOptionsHandle, CBlastProteinOptionsHandle, CBlastOptionsHandle, CBlastNucleotideOptionsHandle, CBlastAdvancedProteinOptionsHandle
• SetQueryRangeSelection() : CCrossAlnPane, CHitMatrixWidget, CCrossAlnWidget
• setQueryRows() : CdBlaster
• SetQueryStart() : CAlignShadow
• SetQueryStop() : CAlignShadow
• SetQueryStrand() : oligofar::IAligner, oligofar::CAligner, CAlignShadow
• SetQueryString() : oligofar::TAlignerBase< CQuery, CSubject >, CCgiArgs_Parser
• SetQueryTranslation() : CESearchResult_Base::C_Data::C_Info::C_Content
• SetQueryTree() : CQueryParseTree
• SetQueryVisibleRange() : CHitMatrixWidget, CHitMatrixPane, CCrossAlnWidget
• SetQueue_search() : CBlast4_request_body_Base, CBlast4_reply_body_Base
• SetQueueDB() : CNetScheduleServer
• SetQueuedTasksThreshold() : CThreadPool_Controller_PID
• SetR() : CColor_prop_Base
• SetRabove() : CPC_StereoSquarePlanar_Base, CPC_StereoPentagonalBiPyramid_Base, CPC_StereoOctahedral_Base
• SetRadical() : CPC_Atoms_Base
• SetRadio() : CTestCmdUI, ICmdUI
• SetRadius() : CSphere_Base, CCylinder_Base, CGlTube< Curve >
• SetRadius_bottom() : CCone_Base
• SetRandomizeAmbiguities() : CSeqVector_CI, CSeqVector
• SetRandomOrder() : CClassTypeInfo
• SetRange() : CDummyGlyph, CDummyLayoutObject, oligofar::CBatch, CRegexpUtil, CAlnMap::CAlnChunk, SSeqMapSelector, CInt_fuzz_Base, CRuler, CLayoutFeatLabel, CBookmark, CViewDesc_Base, CPluginValueConstraint_Base, CDataMiningPanel, CLength_distribution_params_Base, CBlastInputSourceConfig, CQueryOptionsArgs
• SetRangeLimit() : CSearchFormBase, IDMSearchForm
• SetRangeOfRow() : Block
• SetRanges() : CSeqDBRangeList
• SetRangeSelection() : CSeqGraphicPane, CTextSelHandler, CSeqTextWidget, CSeqTextPane, CSeqGraphicWidget, CHitMatrixPane
• SetRank() : CMZI, CPC_AssayResults_Base, CCdd_org_ref_Base
• SetRankInGene() : CGeneModel
• SetRankScore() : CSearch< LEGACY, NHITS >
• SetRasterHeight() : CPrintOptions
• SetRasterWidth() : CPrintOptions
• SetRaw() : CPluginReply_Base
• SetRaw_score() : CBlast4_cutoff_Base
• SetRawCgi() : CCgiResponse
• SetRbelow() : CPC_StereoSquarePlanar_Base, CPC_StereoPentagonalBiPyramid_Base, CPC_StereoOctahedral_Base
• SetRbottom() : CPC_StereoPlanar_Base
• SetRead() : CPhrap_Sequence
• SetReadCount() : oligofar::CBatch
• SetReadDataFile1() : oligofar::CReaderFactory
• SetReadDataFile2() : oligofar::CReaderFactory
• SetReaderName() : CGBLoaderParams
• SetReaderPtr() : CGBLoaderParams
• SetReadFirst() : CFastaLoadParams
• SetReadFunction() : CTypeInfo, CVariantInfo, CMemberInfo
• SetReadGroup() : CJob
• SetReadHandle() : CPipe
• SetReadIdFile() : oligofar::CReaderFactory
• SetReadingFrame() : CFxnSet_Base::C_Attlist, CCDSInfo
• SetReadMissingFunction() : CMemberInfo
• SetReadOnly() : CFolderEditDlg
• SetReadonly_status() : CCdd_descr_Base
• SetReadOnWrite() : CSocketAPI, CSocket
• SetReadout_annot() : CPC_AssayPanelTestResult_Base
• SetReadProgressIndicator() : oligofar::CBatch
• SetReadUpdateLimit() : CBDB_Cache
• SetReadWriteMethods() : CClassInfoHelper< C >
• SetReal() : CSeqTableSetAnyFeatField, CSeqTableSetAnyLocField, CSeqTableSetExt, CSeqTableSetFeatField, CSeqTableSetLocField, CSeqTable_single_data_Base, CSeqTable_multi_data_Base, CSeq_graph_Base::C_Graph, CScore_Base::C_Value, CNumbering_Base, CUser_field_Base::C_Data, CBlast4_value_Base
• SetReal_list() : CBlast4_value_Base
• SetRealized() : CTempTrackProxy
• SetReals() : CUser_field_Base::C_Data
• SetRealValueFormat() : CObjectOStreamXml
• SetReBuildCommandLine() : CTool_Base::C_Attlist
• SetRecent_items() : CMRUCache_Base
• SetRecent_projects() : CMRUCache_Base
• SetRecent_workspaces() : CMRUCache_Base
• SetRecip_best() : CHG_Stats_Base
• SetRecompile() : CDB_RPCCmd, I_RPCCmd, impl::CBaseCmd
• SetRecord() : CAnnotRecord, CMessageSlot, CEventRecordDetailsDlg
• SetRecordMoved() : CBDB_MergeBlobWalkerAsync< BF >, CBDB_MergeBlobWalker< BF >, IMergeVolumeWalker
• SetRecs() : CMedlars_entry_Base
• SetRect() : CCdd_Viewer_Base, CMapItem, IwxMapItem, CGlyph, CGraphPanel
• SetRed() : CImage, CCn3d_color_Base, CRgbaColor
• SetRef() : CSeq_ext_Base, CNumbering_Base, CSourceFileRef_Base::C_Attlist, CSoftwareRef_Base::C_Attlist, CReferenceableParamGroupRef_Base::C_Attlist
• SetReference() : CModel_coordinate_set_Base::C_Coordinates, CINSDReference_Base, CGC_Assembly_Base, CGBReference_Base, CAssembly_Base::C_Attlist, CUpdate_comment_Base, CFeature_evidence_Base, CCdd_org_ref_Base, CCdd_descr_Base, CBlastOutput_Base
• SetReference_frame() : CModel_space_Base
• SetReferenceableParamGroup() : CReferenceableParamGroupList_Base
• SetReferenceableParamGroupList() : CMzML_Base
• SetReferenceableParamGroupRef() : CTarget_Base, CSpectrumDescription_Base, CSpectrum_Base, CSourceFile_Base, CSource_Base, CSelectedIon_Base, CScan_Base, CSample_Base, CRun_Base, CReferenceableParamGroupRef_Base, CProcessingMethod_Base, CIsolationWindow_Base, CInstrumentConfiguration_Base, CFileContent_Base, CDetector_Base, CContact_Base, CChromatogram_Base, CBinaryDataArray_Base, CAnalyzer_Base, CActivation_Base, CAcquisitionSettings_Base, CAcquisitionList_Base, CAcquisition_Base
• SetReferenced() : DTDElement
• SetReferenceDTD() : CObjectOStreamXml
• SetReferences() : CBioseqContext, CMim_entry_Base, CINSDSeq_Base, CGBSeq_Base, CVisualStudioProject_Base
• SetReferenceSchema() : CObjectOStreamXml
• setReferenceSeqAlign() : BlockFormater
• SetRefgene() : CEntrezgene_Base
• SetRefinerOptionsViaDialog() : BMARefinerOptionsDialog
• SetRefnum() : CNum_cont_Base
• SetRefresh() : CT3Data_Base
• SetRefresh_project() : CPluginReplyAction_Base
• SetRefs() : CGene_commentary_Base
• SetRefSeqConventions() : CFlatFileConfig
• SetReftype() : CPubdesc_Base
• SetRegenerateTexture() : IPhyloTreeRenderer
• SetReget_blob() : CID2_Request_Base::C_Request, CID2_Reply_Base::C_Reply
• SetRegid() : CPC_XRefData_Base
• SetRegion() : CSeqFeatData_Base, CSeqdesc_Base, CAnnotdesc_Base, CRegion_pntrs_Base, CBiostruc_feature_Base::C_Location
• SetRegionInChunk() : CSeqMap
• SetRegionOff() : UpdateViewerWindow
• SetRegister_interface() : CPluginReplyAction_Base
• SetRegistry() : CRegistryFile
• SetRegistryPath() : CGwasTrackLoadManager, CWigLoadManager, CGffLoadManager, CGffExporter, CGffExportPage, CFlatFileExporter, CFlatFileExportPage, CFASTAFormatLoadManager, CFastaExporter, CFastaExportPage, CBedLoadManager, CAgpLoader, CAgpExporter, CAgpExportPage, CPhyLoader, CPhyExporter, CPhyExportPage, CDotMatrixPanel, CAlignNeedlemanWunschPanel, SCreateNeedlemanWunschParams, CAsnExporter, CAsnExportPage, CGBenchGUI, CWindowManager, CMainFrame, CDialog, CFeatureCheckDialog, CObjectListWidgetSel, CGlWidgetBase, CSnpTableView, CGwasLoadParams, CAutodefParamsPanel, SAutodefParams, CWindowMaskerParams, CWigLoadParams, CFeatTableView, CGffLoadParams, CGffExportParams, CGenBankUILoadManager, CFlatFileExportParams, CFastaLoadParams, CFastaExportParams, CCleanupParams, CBedLoadParams, CAgpLoadParams, CAgpExportParams, CTreeBuilderParams, CSplignParams, CSplignPanel, CPhyLoadParams, CNetBLASTUILoadManager, CMultiAlignView, CMergeAlignmentsParamsPanel, SMergeAlignmentsParams, CGroupAlignmentsParamsPanel, SGroupAlignmentsParams, CFindOverlapParams, CCreateGeneModelParamsPanel, SCreateGeneModelParams, CCleanupAlignmentsParamsPanel, SCleanupAlignmentsParams, CBLASTToolManagerBase, CBLASTSearchOptionsPanel, CAlignSpanView, CUIToolRegistry, IRegSettings, CWorkbench, CWindowManagerService, CViewManagerService, CTaskView, CTaskTablePanel, CPkgManager, CItemSelectionPanel, CEventView, CEventTablePanel, CDiagConsoleView, CDiagConsolePanel, CDiagConsoleList, CFrameworkDemoGUI, CVisibleRangeService, CFileLoadManager, CUIDataSourceService, CSelectionView, CSelectionPanel, CSelectionService, CSearchFormBase, CRunToolDlg, CProjectTreeView, CProjectService, COpenViewManager, CConversionResultPanel, CParamsPanel, COpenViewDlg, COpenDlg, IDMSearchForm, CDataMiningView, CDataMiningService, CDataMiningPanel, CAsnExportParams, CAppExplorerService, CAlgoToolManagerParamsPanel, CAlgoToolManagerBase
• SetReject_loc() : CUpdate_comment_Base
• SetRejectAsLoCompl() : oligofar::CQuery
• SetRejectAsLoQual() : oligofar::CQuery
• SetRejectAsShort() : oligofar::CQuery
• SetRejects() : CCdd_Base
• SetRel() : CPDB_seq_id_Base
• SetRelativePath() : CFFile_Base::C_Attlist
• SetRelativeSize() : CHTML_font
• SetReldate() : CSubmit_block_Base
• SetRelDate() : CESearch_Request, CELink_Request
• SetRelease() : CBioseq_set_Info, CBioseq_set_EditHandle, CBioseq_set_Base, CTextseq_id_Base, CGiimport_id_Base, CSeqEdit_Cmd_ChangeSetAttr_Base::C_Data, CTextannot_id_Base, CPC_Urn_Base, CGlobal_id_Base
• SetRelease_code() : CBiostruc_source_Base::C_Version_of_database
• SetRelease_date() : CBiostruc_source_Base::C_Version_of_database
• SetReleaseDate() : CMim_set_Base
• SetRemap() : CRMRequest_Base, CRMReply_Base
• SetRemark() : CINSDReference_Base, CGBReference_Base
• SetRemote() : CBLASTSearchOptionsPanel
• SetRemoteProgramAndService_Blast3() : CTBlastxOptionsHandle, CTBlastnOptionsHandle, CRPSTBlastnOptionsHandle, CPSIBlastOptionsHandle, CDiscNucleotideOptionsHandle, CBlastxOptionsHandle, CBlastRPSOptionsHandle, CBlastProteinOptionsHandle, CBlastOptionsHandle, CBlastOptions, CBlastNucleotideOptionsHandle
• SetRemove_annot() : CSeqEdit_Cmd_Base
• SetRemove_desc() : CSeqEdit_Cmd_RemoveDesc_Base, CSeqEdit_Cmd_Base
• SetRemove_id() : CSeqEdit_Cmd_RemoveId_Base, CSeqEdit_Cmd_Base
• SetRemove_ids() : CSeqEdit_Cmd_ResetIds_Base
• SetRemove_seqentry() : CSeqEdit_Cmd_Base
• SetRemoveDuplicates() : CAlignFilter
• SetRender() : CBiostruc_feature_Base::C_Property, CSeqGlyph
• SetRenderFormat() : CGuideTree
• SetRenderingContext() : CSeqGlyph, CFeaturePanelDS
• SetRenderingMenuFlag() : StructureWindow
• SetRenderingOption() : IPhyloTreeRenderer
• SetRenderingStyle() : StyleSettings
• SetRepeatComment() : CSeqGraphicConfig
• SetRepeatCount() : CNCBINode
• SetRepeatFiltering() : CBlastOptionsLocal, CBlastOptions, CBlastNucleotideOptionsHandle
• SetRepeatFilteringDB() : CBlastOptionsLocal, CBlastOptions, CBlastNucleotideOptionsHandle
• SetRepeats() : CCdd_descr_Base
• SetRepeats_filtering() : CBlast4_common_options_query_filtering_Base
• SetReplace() : CPDB_block_Base
• SetReplace_annot() : CSeqEdit_Cmd_Base
• SetReplaced() : CID2_Blob_Seq_id_Base
• SetReplaced_by() : CSeq_hist_Base, CBiostruc_history_Base
• SetReplaces() : CSeq_hist_Base, CBiostruc_history_Base, CUpdate_comment_Base
• SetReplacethresh() : CMSIterativeSettings_Base
• SetReplicon_count() : CGC_Scaf_stats_Base
• SetReply() : CTaxon3_reply_Base, CRemap_reply_Base, CID2_Reply_Base, CEntrez2_reply_Base, CPluginMessage_Base
• SetReply_to() : CMessageHistoryInfo_Base
• SetReport() : CEFetch_Taxonomy_Request
• SetReporter() : CTaxTreeBrowser, CPluginMessage
• SetReportErrors() : CAppJobTask
• SetRepr() : CSeqMap, CSeqEdit_Cmd_ChangeSeqAttr_Base::C_Data, CSeq_inst_Base
• SetRequest() : CSearch< LEGACY, NHITS >, CBlockingQueue< TRequest >::CQueueItem, CTaxon3_request_Base, CRemap_request_Base, CMSSearch_Base, CID2_Request_Get_Blob_Info_Base::C_Blob_id::C_Resolve, CID2_Request_Base, CID2_Reply_Get_Seq_id_Base, CEntrez2_request_Base, CBlast4_archive_Base, CPluginMessage_Base
• SetRequest_id() : CBlast4_get_request_info_request_Base, CBlast4_queue_search_reply_Base, CBlast4_get_search_strategy_request_Base, CBlast4_get_search_status_request_Base, CBlast4_get_search_results_request_Base
• SetRequestContext() : CDiagContext, CDiagContextThreadData
• SetRequested() : CAutoDefAvailableModifier
• SetRequestedId() : CReaderRequestResult, CTSE_Info
• SetRequestFlags() : CCgiApplication
• SetRequestId() : CDiagContextThreadData, CCgiApplication
• SetRequestID() : CRequestContext
• SetRequestMethod() : CEUtils_Request
• SetRequestStatus() : CRequestContext
• SetRequired() : CField_rule_Base
• SetResearchthresh() : CMSIterativeSettings_Base
• SetReserveCmmt