Here is a list of all class members with links to the classes they belong to:

- a -

• a : nwaln_mrnaseg
• a_cand : SLOCAL_Data, SDISPD_Data
• a_skip : SSERV_IterTag
• AA : CMSPeak
• aa_table : CTranslationTable
• aaa : CAlnMultiDSBuilder
• AACount() : CProtProp
• AalookupTestFixture() : AalookupTestFixture
• AAMap : CAA
• AascanTestFixture() : AascanTestFixture
• abbreviation : proteinabbrev
• Abort() : CThreadPool_Impl, CCacheBlobStream, CConnection, SNetServerConnectionImpl, CThreadPool, CWriter::CBlobStream, mu::Test::ParserTester, CPluginBase, CDB_Connection, CODBC_Connection, CMySQL_Connection, I_Connection, impl::CConnection, CDBL_Connection, CTL_Connection, IConnection, CBDB_Transaction, CDatagramSocket, CSocket
• AboveNode() : CTreeConstIterator, CTreeIterator, CFullTreeConstIterator, CTaxTreeConstIterator, ITreeIterator
• AboveThresh() : CMSPeak
• Abs() : mu::ParserInt, mu::Parser
• abs_merge_cutoff_dist : CWinMaskConfig, CSeqMasker
• AbsMergeCutoffDist() : CWinMaskConfig
• AbstractLexer() : AbstractLexer
• AbstractParser() : AbstractParser
• acc_count : CPatternStats
• Accept() : impl::CDBExceptionStorage, CSeqGlyph, CLayoutGroup, CGlyphContainer, CRnaCdsGroup, CGeneGroup, CListeningSocket
• accept_timeout : SServer_Parameters
• AcceptLine() : CSimpleMakeFileContents::SParser
• Acceptor() : CSeqScores
• AcceptorNumber() : CSeqScores
• AcceptorScore() : CSeqScores
• AcceptRequest() : CPoolOfThreads< TRequest >
• AcceptsFocus() : CUnfocusedScrollbar
• AcceptUrgentRequest() : CPoolOfThreads< TRequest >
• access : CGuiRegistry::SKeyInfo
• access_mode : _hcattr
• access_time : SNCBlobInfo
• accession : CGFFReader::SRecord::SSubLoc
• AccessionBioseqMap : CDRefresher
• accessions : CGuideTree::STreeInfo, CAltValidator
• AccessionToOids() : CSeqDBVol, CSeqDBImpl, CSeqDB
• AccessState() : CFeatureCheckPanel
• accum_ : bm::bit_in< TDecoder >, bm::bit_out< TEncoder >
• accum_functor : CDensityMap< CntType >
• Accumulate() : CSeqDB_AliasExplorer, CSeqDB_AliasWalker, CSeqDB_IdListValuesTest, CSeqDB_MembBitWalker, CSeqDB_TotalLengthStatsWalker, CSeqDB_TotalLengthWalker, CSeqDB_NSeqsStatsWalker, CSeqDB_NSeqsWalker, CSeqDB_MaxLengthWalker, CSeqDB_TitleWalker
• acession : BioseqInfo
• AcknowledgeBlastQuery() : CAlignFormatUtil
• AcknowledgeBlastSubject() : CAlignFormatUtil
• ACos() : mu::Parser
• ACosh() : mu::Parser
• Acquire() : CObjPoolGuard< TObjPool >
• AcquireDataLoader() : CObjectManager
• AcquireDefaultDataSources() : CObjectManager
• AcquireLock() : CNCBlobLockHolder, CYieldingRWLock
• AcquireMutex() : CInitMutexPool
• AcquireReadLock() : CYieldingRWLock
• AcquireSharedBioseq() : CObjectManager
• AcquireSharedSeq_annot() : CObjectManager
• AcquireSharedSeq_entry() : CObjectManager
• AcquireWriteLock() : CYieldingRWLock
• acs1 : CIntron
• acs2 : CIntron
• acsj0 : CIntron
• acsj1 : CIntron
• acsj2 : CIntron
• Action : CStatement, CResultSetMetaData, CResultSet, CDataSource, CCursor, CConnection, CBulkInsert, CActiveObject, IEventListener, CSeq_entry_Select_EditCommand< Handle, Data >
• action : CHTMLPopupMenu::SItem
• Activate() : CServer_Listener, IServer_ConnectionBase, PNGOptionsDialog
• ActivateClient() : CGBenchGUI, CWindowManager, CWindowManagerService, IWindowManagerService, CFrameworkDemoGUI
• ActivateClients() : CWindowManager, CDockManager, CDockContainer, CWindowManagerService, IWindowManagerService
• activeEnsemble : AtomSet
• ActiveProgress() : CAppJobDispatcher::SJobRecord
• actual_name : CMetaRegistry::SEntry
• actual_window : BLAST_DiagTable
• actuallyexists : _cs_objdata
• ActualName : DBCOL
• AdaptForSTL() : CTypeStrings
• add() : CValuesCount, CSurveyBrowser
• Add() : CFilterSet2, CResolvedTypeSet, CComments, CMaskInfoRegistry, CPdfDictionary, CPdfArray, CPageBuffers, CSeq_locFormatter, CODBCContextRegistry, CDblibContextRegistry, CTLibContextRegistry, CServer_ConnectionPool, oligofar::CComplexityMeasure, CTrItemPacked< bitst, bitsc >, oligofar::CAligner::CDiagonalScores, CTextColumn, CTestActionList, CSeedRoots, CSubjectMap_Factory_Base::CMaskHelper, CAliCreator, CCache< TKey, TValue, THandler, TLock, TSize >, CIntervalTree, ITransactionalRegistry, CAlnMixSequences, CAlnMix, CAlnMixMatches, CUnsupportedEditSaver, CSeq_inst_SplitInfo, CSeq_annot_SplitInfo, CLocObjects_SplitInfo, CSeqsRange, COneSeqRange, SChunkInfo, CBlobSplitterImpl, CAnnotPieces, SIdAnnotPieces, CSeq_loc_Conversion_Set, DescDBFunc< CSeq_entry_EditHandle >, DBFunc< CSeq_entry_EditHandle, CSeq_descr >, CSeq_annot_Info, DescDBFunc< Handle >, DBFunc< Handle, CSeq_descr >, CEditsSaver, IEditSaver, CSeq_loc_equiv, CSeq_loc, CInt_fuzz, CBlast4_parameters, CSelectDescription, CSurveyBrowser, CGroupRadioButtons, CGroupCheckboxes, CFilterSet2, CGlyphContainer, CAlnTableDS, CAlnTableWidget, mu::ParserInt, mu::ParserComplex, CTimeMRUList< T >, CClipboard, CBBox< N >, CGlContainer, CSeqFetchQueue, CObjectIndex, CObjClipboard, CFilterSet, CPointerPot, impl::CCachedRowInfo, CDBUDPriorityMapper, CDBUDRandomMapper, CBDB_Transaction, CBDB_ExtBlobMap, CCompoundRWRegistry, CCompoundRegistry, CRawPointer, CFileDeleteAtExit, CFileDeleteList, CNcbiArguments, CMutableAtomicCounter, CAtomicCounter, CArgs, CMask, CCgiCookies, CScoreVector< Key, Score >, CRawScoreVector< Key, Score >, CCompareSeq_locs::SIntervalComparisonResultGroup
• Add2() : CSeedRoots
• add_bit_block() : bm::bv_statistics
• add_edge() : CConvGraph
• add_gap_block() : bm::bv_statistics
• add_ht_info() : CSeqMaskerUsetHash
• add_info() : CSeqMaskerUsetSimple, CSeqMaskerUsetArray
• add_loc() : dup_lookup_table, dup_lookup_table::sample
• add_matched_namespace_def() : xml::node
• add_namespace_def() : xml::node
• add_namespace_definition() : xml::node
• add_namespace_definitions() : xml::node
• add_seq_info() : dup_lookup_table
• add_triplet_info() : CSymDustMasker::triplets
• add_vt_info() : CSeqMaskerUsetHash
• AddAccelerator() : CUICommandRegistry, CUICommand
• AddAcceptor() : oligofar::CSpacialRanges
• AddAccRuns() : CPatternStats
• AddAction() : CPrefetchManager, CPrefetchManager_Impl, CPluginReply
• AddAffinity() : CWorkerNodeAffinityGuard, CQueue
• AddAggregateMeasures() : CNCMMStats
• AddAlias() : CArgDescriptions
• AddAlign() : CSeq_annot_EditHandle
• AddAlignedBlockAtEnd() : BlockMultipleAlignment
• AddAligner() : CNgAligner
• AddAlignment() : oligofar::IAlignmentMap, oligofar::CSamSource, CAlnSpanVertModel, CAlignmentSmear, MultipleAlignment, AlignmentCollection
• AddAlignments() : UpdateViewer, CDensityMap< CntType >, CAlignmentSmear
• AddAlnToMix() : CAlnVwrApp, CAlnMrgApp
• AddAmbiguity() : CAmbiguityContext
• AddAndSplit() : CDelta_ext
• AddAnnot() : CSeq_entry_Info, CTSE_ScopeInfo, CBioseq_Base_Info, CAlignmentSmear
• AddAnnotPlace() : CTSE_Default_Assigner, ITSE_Assigner
• AddApplicableUserType() : CPluginInfo
• AddArea() : CHTML_map
• AddArg() : CGetOpt
• AddArgument() : CCgiEntries_Parser, CPluginCommand, CPluginArgSet, CCgiArgs, CCgiArgs_Parser
• AddArray() : CSeriesBase
• addAsnSeqTreeNode() : SeqTreeAsnizer
• AddAssemblyInfo() : CTSE_Default_Assigner, ITSE_Assigner
• AddAssignOp() : mu::ParserByteCode
• addAttribute() : CMsHdf5
• AddAttribute() : DTDElement, CAnyContentObject
• AddAttributes() : DTDParser
• AddBacklog() : CException
• AddBaseCode() : oligofar::fourplanes::CHashCode
• AddBaseMask() : oligofar::fourplanes::CHashGenerator, oligofar::fourplanes::CHashPlanes
• AddBaseTag() : CBrowserUtils
• addBatch() : HitDistributor
• AddBioseq() : CScope, CScope_Impl
• AddBioseqPlace() : CTSE_Default_Assigner, ITSE_Assigner
• AddBioseqWithNoBiosource() : CValidError_imp
• AddBioseqWithNoPub() : CValidError_imp
• AddBiostrucToASN() : StructureSet, ASNDataManager
• AddBlacklistQueryId() : CAlignFilter
• AddBlacklistSubjectId() : CAlignFilter
• AddBlob() : CWriteDB_Column, CWriteDB_ColumnBuilder
• AddBlob_id() : CLoadLockBlob_ids, CLoadInfoBlob_ids
• AddBlobDelete() : CNCDBStat
• AddBlobQuotaError() : SBDB_CacheStatistics, SBDB_CacheUnitStatistics
• AddBlobRead() : CNCDBStat
• AddBlobWritten() : CNCDBStat
• AddBlock() : ConservationColorer
• addBlock() : BlockModel
• AddBlockBoundaryRow() : SequenceDisplay
• AddBlockBoundaryRows() : SequenceDisplay
• AddBookmark() : CBookmarkManager
• AddBuffer() : CPrintContext
• AddByteOrder() : CWriteDB_Column
• AddCallback() : oligofar::CSeqVecProcessor, mu::ParserBase
• AddCandidate() : CObjectsSniffer
• AddCddDescr() : CCdCore
• AddChar() : AbstractLexer, AbstractLexer::CComment
• AddChars() : AbstractLexer, CChecksum
• AddChild() : CTreeIterator, CTreeCont, CNcbiTestTreeElement, CDockLayoutTree::CNode, CBLAST_Dlg_Item, CLinkedFeature
• addChild() : CDFamily
• AddChildFolder() : CWorkspaceFolder, CProjectFolder, CWorkspaceFolderPrx, CProjectFolderPrx
• AddChildItem() : CProjectFolder, CExplorerItem
• addChildNode() : SeqTreeAsnizer
• AddChoice() : CGetOpt
• AddChunk() : CFileSourceCollector, CWriterSourceCollector, CMemorySourceCollector, CSubSourceCollector, CSplitBlob, CTSE_Split_Info
• AddChunkRead() : CNCDBStat
• AddChunkWritten() : CNCDBStat
• AddCircle() : CHTML_map
• AddClient() : CMinPanelContainer, CDockContainer
• AddClientInfo() : CQueueClientInfoList
• AddClientInTab() : CWindowManager, CWindowManagerService, IWindowManagerService
• AddClientToCentralPane() : CDockContainer
• AddClientToDefaultLocation() : CDockContainer
• AddClosedConnection() : CNCServerStat
• AddCollectGuard() : CDiagContextThreadData
• AddColumn() : CNcbiTable< TValue, TRow, TColumn >, CSeqTableLocColumns, CwxTableListCtrl, CSplitter, CObjectList, CAlnMultiRenderer
• AddColumnMetaData() : CWriteDB_Volume, CWriteDB_Impl, CWriteDB
• AddCommand() : CScopeTransaction_Impl, IScopeTransaction_Impl, CMultEditCommand, CNcbiResource
• AddCommands() : CMultEditCommand
• AddComment() : AbstractLexer, CSeq_annot, CCdCore, CGeneModel
• AddCommError() : SBDB_CacheStatistics, SBDB_CacheUnitStatistics
• addComParent() : CDNode
• AddCompLen() : CMapCompLen
• AddComponentVersion() : CVersion
• AddConfigLine() : CCodeGenerator
• AddConnect() : CDbapiConnMgr
• AddConst() : pythonpp::CModuleExt
• AddConstraint() : CPluginCommand, CPluginArgSet
• AddConstructionCode() : CClassCode
• AddConstValue() : pythonpp::CModuleExt
• AddContent() : DTDElement
• AddContextOffsetToChunk() : CSplitQueryBlk
• AddContextToChunk() : CSplitQueryBlk
• AddContributor() : CMenuService, IMenuService, CDataMiningService
• AddConversion() : CMappingRanges
• AddCount() : CTrItemPacked< bitst, bitsc >
• AddCPPCode() : CFileCode, CClassCode, CClassContext
• AddCreateDate() : CCdCore
• AddCreateHitExisting() : CNCDBStat
• AddCurrentValue() : oligofar::CProgressIndicator
• AddCustom() : CFilterSet2
• AddCustomConfH() : CProjBulderApp
• AddCustomMetaData() : CProjBulderApp
• AddData() : CFastaAlignmentBuilder, CSeqDBMovingAverage, COffsetList
• AddDatabase() : CLDS_DatabaseHolder
• AddDataLoader() : CScope, CScope_Impl
• AddDataLoaders() : CBlastScopeSource
• AddDataSource() : CUIDataSourceService
• AddDatatoolSourcesDepends() : CProjectTreeBuilder
• AddDay() : CTime
• AddDBFilesSizes() : CNCDBStat
• AddDBPartSizes() : CNCDBStat
• AddDbxref() : CSeq_feat_EditHandle, CSeq_feat
• AddDefaultArgument() : CPluginCommand, CPluginArgSet
• AddDefaultFlag() : CPluginCommand, CPluginArgSet
• AddDefaultKey() : CArgDescriptions
• AddDefaultListener() : CNetScheduleServer
• AddDefaultPkg() : CPkgManager
• AddDefaultPositional() : CArgDescriptions
• AddDefaults() : CScope, CScope_Impl
• AddDefinition() : CDataTypeModule, CSymResolver, CSimpleMakeFileContents
• AddDefinitions() : CRefArgs
• AddDelimiters() : CBoyerMooreMatcher
• AddDesc() : CUnsupportedEditSaver, CEditsSaver, IEditSaver
• AddDescInfo() : CTSE_Default_Assigner, ITSE_Assigner
• AddDescr() : CUnsupportedEditSaver, CSeq_entry_EditHandle, CEditsSaver, IEditSaver
• AddDestructionCode() : CClassCode
• AddDetailAction() : CThemeConfigPanelBase, IThemeConfigPanelBase
• AddDirectory() : wxFileArtProvider
• AddDirectWritten() : CBufferedSockReaderWriter
• AddDisabledFormat() : CFormatGuess::CFormatHints
• AddDllSearchPath() : C_xDriverMgr, C_DriverMgr, CPluginManager< TClass >
• AddDNAText() : CProSplignText
• AddDon() : CFIntron, CAnyIntron::CSIntronScore
• AddDon1() : CFIntron
• AddDon2() : CFIntron
• AddDonAny() : CFIntron
• AddDonCon() : CFIntron
• AddDonor() : oligofar::CSpacialRanges
• AddDouble() : CObjFingerprint
• AddDS() : CScope_Impl
• AddDSBefore() : CScope_Impl
• AddEditSaver() : CScopeTransaction_Impl, IScopeTransaction_Impl
• AddElement() : XSDLexer, CContainerTypeInfoFunctions, PeriodicTableClass, CStlClassInfoFunctions_multiset< Container >, CStlClassInfoFunctions_set< Container >, CStlClassInfoFunctions< Container >, CContainerTypeInfo, CClusterer::CSingleCluster
• AddElementContent() : DTDParser
• AddElementIn() : CContainerTypeInfoFunctions, CStlClassInfoFunctions_multiset< Container >, CStlClassInfoFunctions_set< Container >, CStlClassInfoFunctions< Container >
• addEntry() : RowSourceTable
• AddEntry() : oligofar::CWordHash, CSeq_entry_Info, CTSE_ScopeInfo, CBioseq_set_Info
• AddEnumValue() : DTDAttribute
• AddEventMessage() : CStatusBarService, IStatusBarService
• AddExclusion() : CMask
• AddExistenceCheck() : CNCDBStat
• AddExistingLabel() : CUniqueLabelGenerator
• AddExon() : CGeneModel
• AddExplDelete() : SBDB_CacheStatistics, SBDB_CacheUnitStatistics
• AddExports() : CDataTypeModule
• AddExtension() : CExtensionRegistry, CExtensionPoint, IExtensionRegistry, IExtensionPoint, CUserTypeExtensionPoint
• AddExtensionPoint() : CExtensionRegistry, IExtensionRegistry
• AddExtra() : CArgDescriptions
• AddExtraColumn() : CSeqTableLocColumns
• AddFasta() : CBuildDatabase
• AddFeat() : CSeq_annot_EditHandle
• AddFeatQual() : CFeature_table_reader_imp, CFeature_table_reader
• AddFeature() : CFeatTree, CDensityMap< CntType >, CBioTree< TBioNode >
• AddFeatures() : CFeatTree, CDensityMap< CntType >
• AddField() : CUser_object, CUser_field
• AddFields() : MoleculeIdentifier
• AddFieldWindow() : CStatusBar
• AddFile() : CFileSet
• AddFileFormat() : CFileLoadManager
• AddFileForTransfer() : IRemoteAppRequest_Impl, CRemoteAppRequestSB, CRemoteAppRequestMB, IRemoteAppRequest
• AddFilenames() : CMultiFileInput
• AddFilter() : CNgAligner
• AddFilters() : CSeqDB_FilterTree
• AddFinishedCmd() : CNCServerStat
• AddFirstScorer() : SimpleBoundaryExtenderAndShrinker
• AddFlag() : CGetOpt, CPluginCommand, CPluginArgSet, CArgDescriptions
• AddFlags() : CGetOpt, mu::ParserToken< TBase, TString >
• AddFlavor() : CClipboard
• AddFlavorAt() : CClipboard
• AddForwardDeclaration() : CFileCode, CClassCode, CClassContext
• AddFrameInfo() : CSerialException
• AddFrom() : CModelExon
• AddFShifts() : CChainer::CChainerImpl
• AddFun() : mu::ParserByteCode
• AddFunc() : CQueryExec
• AddFwdName() : CPCRSetList
• AddFwdSeq() : CPCRSetList
• AddGCLockAcquired() : CNCDBStat
• AddGCLockRequest() : CNCDBStat
• AddGene() : CAutoDefFeatureClause_Base, CAutoDefFeatureClause
• AddGi() : CLDS_Seq_ids, CWriteDB_GiIndex, CSeqDBNegativeList, CSeqDBGiList
• AddGiMask() : CWriteDB_GiMask
• AddGIs() : CWriteDB_GiMaskIndex, CWriteDB_GiMaskOffset
• AddGraph() : CSeq_annot_EditHandle, CGraphContainer, CGraphPanel
• AddGroup() : CGetOpt, CEUtils_IdGroupSet, CGroupMapWidget
• AddHandler() : CPopupMenuEvent
• AddHash() : CWriteDB_Isam, CWriteDB_IsamIndex
• AddHeaderFile() : IFilesToProjectInserter
• AddHelp() : CGetOpt
• AddHidden() : CHTML_form
• AddHighlights() : Messenger
• AddHint() : CBulkInsert, CDB_BCPInCmd, impl::CBaseCmd, CTL_BCPInCmd, IBulkInsert
• AddHit() : oligofar::CGuideSamFile, CMSPeak
• AddHole() : CGeneModel
• AddHoleText() : CProSplignText
• AddHour() : CTime
• AddHPPCode() : CFileCode, CClassCode, CClassContext
• AddID() : CIDs
• AddId() : oligofar::CSeqIds::CSeqDef, CInsertAnnotManager, CEUtils_IdGroup, CUnsupportedEditSaver, CBioseq_ScopeInfo, CBioseq_Info, CEditsSaver, IEditSaver, CBioseq_EditHandle
• AddIds() : CWriteDB_Isam, CWriteDB_IsamIndex, oligofar::CSeqIds::CSeqDef, CBuildDatabase
• AddIfCompatible() : CChainer::CChainerImpl
• AddImageString() : CPagerView
• AddImplicitSearchFunc() : CQueryExec
• AddImportRef() : CDataTypeModule
• AddImports() : CDataTypeModule
• AddInactiveImageString() : CPagerView
• AddIncludedOid() : CSeqDBNegativeList
• AddInfo() : SAnnotObjectsIndex
• AddInfoLock() : CScopeInfo_Base
• AddInfoMessage() : python::CCursor
• AddIniParser() : CGetOpt
• AddIniPrinter() : CGetOpt
• AddInitializer() : CClassCode
• AddINLCode() : CFileCode, CClassCode, CClassContext
• AddInlineFile() : IFilesToProjectInserter
• AddInteger() : CObjFingerprint
• AddInternalError() : SBDB_CacheStatistics, SBDB_CacheUnitStatistics
• AddInternalFeature() : CAnnotationASN1::CImplementationData
• AddInterval() : CSeq_loc_mix, CPacked_seqint, CRasterizer< A >
• AddIntervals() : CPacked_seqint
• AddIonsToHit() : CSearch< LEGACY, NHITS >
• AddItem() : CFlatFileFactoryBuilder, CItemsInfo, CFlatItemOStream, CFormatItemOStream, CHTMLPopupMenu, CMapControl, CGroupMapWidget, CCompositeTextItem, CTextViewRetrieveResult, CThemeConfigPanelBase, IThemeConfigPanelBase, CMRUList< T >, CMRUCache, IGBProject, CGBProjectHandle, CGBProject_ver2, CGBProject
• AddItems() : CTextItemPanel
• AdditionalDependencies() : CLinkerToolDummyImpl, CLinkerToolImpl< ConfTrait >, ILinkerTool
• AdditionalIncludeDirectories() : CResourceCompilerToolDummyImpl, CResourceCompilerToolImpl< DebugReleaseTrait >, CCompilerToolImpl, IResourceCompilerTool, ICompilerTool, CMsvcPrjProjectContext
• AdditionalLibraryDirectories() : CLibrarianToolDummyImpl, CLibrarianToolImpl, CLinkerToolDummyImpl, CLinkerToolImpl< ConfTrait >, ILibrarianTool, ILinkerTool, CMsvcPrjProjectContext
• AdditionalLinkerOptions() : CMsvcPrjProjectContext
• AdditionalOptions() : CResourceCompilerToolDummyImpl, CResourceCompilerToolImpl< DebugReleaseTrait >, CLibrarianToolDummyImpl, CLibrarianToolImpl, CLinkerToolDummyImpl, CLinkerToolImpl< ConfTrait >, CCompilerToolImpl, IResourceCompilerTool, ILibrarianTool, ILinkerTool, ICompilerTool
• AddIupacNa() : oligofar::fourplanes::CHashGenerator, oligofar::fourplanes::CHashCode, oligofar::fourplanes::CHashPlanes
• AddJob() : CQueueWorkerNodeList
• AddJobsToAffinity() : CQueue
• AddJobToWorkerNode() : CQueue
• AddKey() : CArgDescriptions
• AddKVS() : SNetICacheClientImpl
• AddLevels() : CTableSortMultiChoice
• AddLine() : CChecksum, IFlatTextOStream, COStreamTextOStream, CPlainTextItem
• AddList() : CGetOpt
• AddListener() : CActiveObject, CEventHandler, CRWLockHolder, IWorkerNodeCleanupEventSource, CServer
• AddLiteral() : CDelta_ext
• addLocation() : CReadBlastApp
• AddLocation() : CHandleRangeMap, CVisibleRangeEvent, CDensityMap< CntType >, CVisibleRange
• AddLock() : CTSE_LockSet, CSeq_id_Info
• AddLockAcquired() : CNCDBStat
• AddLockRequest() : CNCDBStat
• addLoctoSimpleSeq() : CReadBlastApp
• AddMap() : SAnnotObjectsIndex
• AddMapEntry() : CIdMapperBuiltin, CIdMapperConfig
• AddMapper() : CEnvironmentRegistry
• AddMapping() : CSeqDB_IdRemapper, CIdMapper
• AddMask() : CBlastQueryVector, CBlastSearchQuery
• AddMatch() : CTextFsm< MatchType >::CState
• AddMember() : CClassTypeStrings, CDataMemberContainerType, CClassTypeInfoBase, CCompartmentFinder< THit >::CCompartment
• AddMembers() : CDataContainerType
• AddMessageAllQueries() : TSearchMessages
• AddMessageListener() : CSoapServerApplication
• AddMetaData() : CWriteDB_Column, CWriteDB_ColumnIndex, CWriteDB_ColumnBuilder
• addMetadata() : CMsHdf5
• AddMinute() : CTime
• AddMMDBAnnotTag() : Sequence
• AddModel() : CAnnotationASN1::CImplementationData, CAnnotationASN1
• AddModsToHit() : CSearch< LEGACY, NHITS >
• AddModule() : CFileModules
• AddMonth() : CTime
• AddmRNA() : CAutoDefFeatureClause_Base, CAutoDefFeatureClause
• AddName() : CAccPatternCounter, CSeq_annot
• AddNamedAnnotName() : CBlob_Info
• AddNamedAnnots() : SAnnotSelector
• AddNanoSecond() : CTime
• AddNegatedFlagAlias() : CArgDescriptions
• AddNeverRead() : SBDB_CacheStatistics, SBDB_CacheUnitStatistics
• AddNew() : CPackString
• AddNewElement() : CObjectInfo
• AddNewEntry() : CBioseq_set_EditHandle
• AddNewPointedElement() : CObjectInfo
• AddNewRow() : CColorPanel
• AddNewTrack() : CTrackContainer
• AddNoBlobError() : SBDB_CacheStatistics, SBDB_CacheUnitStatistics
• AddNode() : CSeqDB_FilterTree, CTreeCont, CTreeNode< TValue, TKeyGetter >, CBioTree< TBioNode >, CBioTree< TBioNode >::CBioNode
• AddNodes() : CSeqDB_FilterTree
• AddNodeToPool() : CQueryParserEnv, CBDB_QueryParserEnvironment
• addNormalAlignment() : AlignmentCollection
• AddNotExistBlobLock() : CNCDBStat
• AddNucleotidePattern() : CSeqSearch
• AddNumberOfBlobs() : CNCDBStat
• AddNumberOfDBParts() : CNCDBStat
• AddObject() : CTimeLine< BV >, CSoapMessage, CPluginReply
• AddObjects() : CTimeLine< BV >
• AddObjectSelection() : CSelectionEvent
• addOccurence() : ColumnResidueProfile
• addOffset() : BlockModel, Block
• AddOld() : CPackString
• addOneAlignment() : BlockIntersector
• addOneRow() : ResidueProfiles
• AddOp() : mu::ParserByteCode
• AddOpenedConnection() : CNCServerStat
• AddOps() : CEditScript
• AddOptionalArgument() : CPluginCommand, CPluginArgSet
• AddOptionalKey() : CArgDescriptions
• AddOptionalPositional() : CArgDescriptions
• AddOrderHint() : CBulkInsert, CDB_BCPInCmd, impl::CBaseCmd, CTL_BCPInCmd, IBulkInsert
• AddOrgMod() : CAutoDefModifierCombo
• AddOthername() : CCdCore
• AddOverflowConnection() : CNCServerStat
• AddParagraph() : IFlatTextOStream, COStreamTextOStream
• AddPeak() : CMSPeakSet
• addPendingAlignment() : AlignmentCollection
• AddPendingBatch() : CJobStatusTracker
• AddPendingCommand() : CMenuService, IMenuService
• AddPendingSeqAlign() : CCdCore
• AddPeriod() : CCommentItem
• AddPhase() : CBMARefinerCycle
• AddPig() : CWriteDB_Isam, CWriteDB_IsamIndex
• AddPlugin() : CPluginCache
• AddPmidReference() : CCdCore
• AddPoint() : CPacked_seqpnt
• AddPoints() : CPacked_seqpnt
• AddPolygon() : CHTML_map
• AddPositional() : CArgDescriptions
• AddPreferredFormat() : CFormatGuess::CFormatHints
• AddProject() : CWorkspaceFolder, CMRUCache, CWorkspacePrx
• AddProjectItem() : CProjectFolderPrx
• AddProjectView() : CProjectService
• AddProtocolError() : SBDB_CacheStatistics, SBDB_CacheUnitStatistics
• AddProtText() : CProSplignText
• AddProtWithoutFullRef() : CValidError_imp
• AddPStop() : CCDSInfo
• AddPurgeDelete() : SBDB_CacheStatistics, SBDB_CacheUnitStatistics
• AddQual() : CQualContainer< Key >, CAutoDefSourceGroup, CAutoDefSourceDescription, CAutoDefModifierCombo
• AddQualifier() : CSeq_feat_EditHandle, CSeq_feat
• AddQuery() : oligofar::IAlignmentMap, oligofar::CSamSource, oligofar::CQueryHash, oligofar::CBatch, CBlastQueryVector
• AddQueryBatch() : CSequenceInputStats
• AddQueryToChunk() : CSplitQueryBlk
• AddQueue() : CQueueCollection
• addr : SHostInfoTag
• AddRange() : oligofar::CSpacialRanges, CHandleRangeMap, CHandleRange, CGraphRanges, CDensityMap< CntType >, CBDB_RangeMap< TBV >, CSubjectRangesSet, CSubjectRanges
• AddRanges() : CHandleRangeMap, CHandleRange
• AddRangeSelection() : CSelectionEvent
• AddRead() : SBDB_CacheStatistics, SBDB_CacheUnitStatistics
• AddReadLoc() : CPhrap_Read
• AddReadyKV() : CSimpleMakeFileContents
• AddRecord() : CWiggleTrack, CWiggleSet, CEventLogService, IEventLogService
• AddRect() : CHTML_map
• AddRef() : CRegionMap, CGLContextCache, CNCMMChainsPool, CNCMMChunksPool, CEvent, CNetObject
• AddReference() : CDataType, CObject
• AddRegionFlusher() : CSeqDBAtlas
• AddReject() : ASNDataManager
• AddRelation() : CComplexRelation
• AddRenderer() : CPhyloTreePane
• AddRepetitiveTask() : CScheduler_MT, IScheduler
• AddRequest() : CPrefetchThreadOld
• AddRequestValue() : CCgiContext
• AddResolvedId() : CPrefetchTokenOld_Impl
• AddResolver() : CPluginManager< TClass >
• AddResourceInfo() : CNcbiResourceInfoFile
• address : CSeqDBImpl::SSeqRes
• AddResult() : CLDS_FindSeqIdFunc
• AddRevName() : CPCRSetList
• AddRevSeq() : CPCRSetList
• AddRow() : CBulkInsert, SequenceDisplay, CNcbiTable< TValue, TRow, TColumn >, SAlignment_Segment, CSplitter, CObjectList, CLocationListCtrl, CLayout, IBulkInsert
• AddRowChar() : CondensedColumnUnaligned, CondensedColumnAligned, CondensedColumn
• AddRowFromAlignment() : SequenceDisplay
• AddRowFromSequence() : SequenceDisplay
• AddRowFromString() : SequenceDisplay
• addRows() : TaxTreeData, ConsensusMaker
• AddRows() : Block
• addRowSources() : AlignmentCollection
• AddRule() : SAccGuide
• AddScope() : CScopeTransaction, CScope, CScopeTransaction_Impl, IScopeTransaction_Impl, CScope_Impl
• AddScopeToIndex() : CGBWorkspace
• AddScore() : CScoreBuilder
• AddScorer() : ColumnScorer, SimpleBoundaryExtenderAndShrinker, BlockBoundaryAlgorithm, CNgAligner
• AddScores() : CScoreVector< Key, Score >
• AddScoringMethod() : CAlnMultiModel
• AddSecond() : CTime
• AddSecondScorer() : SimpleBoundaryExtenderAndShrinker
• AddSection() : CFlatFileContext
• addSelectionFields() : SeqTree
• AddSeparator() : CHTMLPopupMenu, CMenuItem
• AddSeq_annot() : CScope, CScope_Impl
• AddSeq_data() : CTSE_Default_Assigner, ITSE_Assigner
• AddSeq_descr() : CSeq_entry_Info, CBioseq_Base_Info, CBioseq_set_EditHandle, CBioseq_EditHandle
• AddSeq_entry() : CScope_Impl
• AddSeq_id() : CLDS_Seq_ids, CLoadLockSeq_ids
• AddSeqAlign() : CCdCore
• AddSeqdesc() : CSeq_entry_EditHandle, CSeq_entry_Info, CBioseq_Base_Info, CBioseq_set_EditHandle, CBioseq_EditHandle
• AddSeqInfo() : COffsetData_Factory
• AddSeqLoc() : CBlastQueryFilteredFrames, CSeq_loc_mix
• AddSeqRange() : CDelta_ext
• AddSeqSeg() : COffsetData_Factory
• addSeqTax() : TaxTreeData
• AddSequence() : CWriteDB_Impl, CWriteDB_SequenceFile, CWriteDB_HeaderFile, CWriteDB_IndexFile, CWriteDB, CCdCore, AlignmentCollection
• addSequence() : SequenceTable, CDRefresher
• AddSequenceChunk() : CSubjectMap_Factory, CSubjectMap_Factory_TBase
• AddSequences() : CBuildDatabase
• addSequences() : SequenceTable, CDRefresher
• AddSequenceViewer() : Messenger
• AddSet() : CGetOpt
• AddSetBase() : CColorTableMethod
• AddSettings() : CHistParamsManager
• AddSharedBioseq() : CScope_Impl
• AddSharedSeq_annot() : CScope_Impl
• AddSharedSeq_entry() : CScope_Impl
• AddSibling() : CTreeIterator
• addSimpleTab() : CReadBlastApp
• AddSite() : CGuiRegistry
• AddSource() : CAutoDefSourceGroup, CAutoDefModifierCombo, CCdCore
• AddSourceDescription() : CAutoDefSourceGroup
• AddSourceFile() : IFilesToProjectInserter
• AddSources() : CAutoDef
• AddSpace() : CAlignFormatUtil
• AddSpan() : CWig2tableApplication::SStat, CCompSpans
• addSpectrum() : CMsHdf5
• addSpectrumData() : CMsHdf5
• addSpectrumInfo() : CMsHdf5
• AddSplice() : oligofar::COligoFarApp, CAlignParam
• AddSpliceText() : CProSplignText
• AddState() : IConfigMediator, CConfigMediator
• AddStaticTSE() : CDataSource
• AddStoppedRead() : CNCDBStat
• AddStoppedWrite() : CNCDBStat
• AddStore() : SBDB_CacheStatistics, SBDB_CacheUnitStatistics
• AddStrFun() : mu::ParserByteCode
• AddString() : CRunOfDigits, CSeqDB_AliasWalker, CSeqDB_MembBitWalker, CSeqDB_TotalLengthWalker, CSeqDB_NSeqsWalker, CSeqDB_MaxLengthWalker, CSeqDB_TitleWalker, CStringListCtrl
• AddStringChar() : ASNLexer
• AddStructureAlignment() : StructureSet
• AddStructureWindow() : Messenger
• AddStyle() : CSettingsSet
• AddSubClass() : CClassTypeInfo
• AddSubClassNull() : CClassTypeInfo
• AddSubclause() : CAutoDefExonListClause, CAutoDefFeatureClause_Base
• AddSubItem() : CMenuItem
• AddSubject() : oligofar::IAlignmentMap, oligofar::CSamSource
• AddSubMenu() : CMenuItem
• AddSubsource() : CAutoDefModifierCombo
• AddSupport() : CGeneModel
• AddSymbol() : CExprParser
• AddSynonym() : CSynonymsSet
• AddTagMap() : CHTMLPage, CHTMLBasicPage
• AddTask() : CThreadPool_Impl, CScheduler_MT, CThreadPool, IScheduler, CAppTaskService
• AddTaskCompleted() : CSeqGraphicJob, ISeqTaskProgressCallback
• addTaxToBioseq() : TaxTreeData
• AddTemplateInclude() : CTemplate1TypeStrings
• AddTempTrack() : CTempTrackProxy
• AddTest() : mu::Test::ParserTester
• AddTestDependsOn() : CNcbiTestApplication
• AddTi() : CSeqDBNegativeList, CSeqDBGiList
• AddTime() : CGBRequestStatistics
• AddTimedOutCommand() : CNCServerStat
• AddTimeMetric() : CNCDBStat
• AddTimeSize() : CGBRequestStatistics
• AddTimeSpan() : CTime
• AddTitle() : CSeq_annot, CCdCore
• AddTMListener() : CwxAbstractTableModel, IwxTableModel
• AddTo() : CType< C >, CType_Base, CModelExon
• AddToDefaultLocation() : CDockManager
• AddToGeneCount() : CValidError_imp
• AddToGeneXrefCount() : CValidError_imp
• AddToHistogram() : SBDB_CacheUnitStatistics
• AddToHitList() : CHitList
• AddTokenReference() : CPrefetchTokenOld_Impl
• AddToLocation() : CAutoDefFeatureClause_Base, CAutoDefFeatureClause
• AddToLRU() : CNCMMDBPage
• AddToMisplacedFeatureCount() : CValidError_imp
• AddToMisplacedGraphCount() : CValidError_imp
• AddToolBar() : CWindowManager
• AddToolBarContext() : CWindowManagerService, IToolBarService
• AddToolBarFactory() : CWindowManagerService, IToolBarService
• AddToolToMRU() : CUIToolRegistry
• AddToOtherLocation() : CAutoDefFeatureClause_Base
• AddToPath() : CSystemPath
• AddTopLevelSeqEntry() : CScope
• AddToProjectWorkspaceMRUList() : CProjectService
• AddToScope() : CProjectFileWriter
• AddToSkeleton() : CBlobSplitterImpl
• AddTotalDBSize() : CNCDBStat
• AddTotalLockTime() : CNCDBStat
• AddToTimeLine() : CBDB_Cache
• AddToTpaWithHistoryCount() : CValidError_imp
• AddToTpaWithoutHistoryCount() : CValidError_imp
• AddToWorkbench() : CViewManagerService, IViewManagerService
• AddTrace() : CTraceEvent
• AddTraceInfo() : CHTMLException
• AddTrackProxy() : CTrackContainer
• AddTracks() : CTrackContainer
• AddTrailingPathSeparator() : CDirEntry
• AddTransition() : CTextFsm< MatchType >::CState
• AddTransparentSphere() : OpenGLRenderer
• AddTransparentSpheresForList() : OpenGLRenderer
• AddTSE() : CDataSource
• AddTSE_Lock() : CReaderRequestResult, CDataSource_ScopeInfo
• AddType() : CCodeGenerator, CFileCode, CTypesIteratorBase< Parent >
• AddUnalignedBlocks() : BlockMultipleAlignment
• AddUnnamedAnnots() : SAnnotSelector
• addUpdater() : UpdaterInterface
• AddUpSubHits() : CHit
• AddUsedBioseq() : CBioseq_Handle
• AddUsedTSE() : CTSE_Handle, SSeqMapSelector, CTSE_ScopeInfo
• AddUserAnnotation() : StyleManager
• AddUserFunction() : CNcbiTestApplication
• AddUserObject() : CSeq_annot
• AddUserStyle() : StyleManager
• AddVal() : mu::ParserByteCode
• AddValIdent() : mu::ParserTokenReader, mu::ParserBase
• AddValidErrItem() : CValidError
• AddValue() : CEnumDataType, CWig2tableApplication, CWig2tableApplication::SStat, CNCStatFigure< T >, CEnumeratedTypeValues
• AddValues() : CNCStatFigure< T >
• AddVar() : mu::ParserByteCode
• AddVariant() : CChoiceTypeStrings, CChoicePtrTypeStrings, CChoiceTypeInfo
• AddVersion() : CGetOpt
• AddViewToMRU() : CViewManagerService, IViewManagerService
• AddVisibleOid() : CSeqDBNegativeList
• AddVolume() : CSeqDB_FilterTree, CBDB_Volumes
• AddVolumes() : CSeqDB_FilterTree
• AddW1() : CAnyIntron
• AddW2() : CAnyIntron
• AddWhitelistQueryId() : CAlignFilter
• AddWhitelistSubjectId() : CAlignFilter
• AddWord() : CTextFsa, CTextFsm< MatchType >, CSimpleDictionary
• AddWordFrequencies() : CTextUtil
• AddWorkspace() : CMRUCache
• AddYear() : CTime
• adj1 : SRombergCbackArgs
• adj2 : SRombergCbackArgs
• adjTimeDiff : CTime::TData
• Adjust() : CSeqportUtil_implementation, oligofar::CGuideSamFile::C_Value, CSubjectMap_Factory_Base::CMaskHelper
• adjust_cleanup : SHttpConnector
• adjust_data : SHttpConnector
• adjust_net_info : SHttpConnector
• AdjustAlignment() : oligofar::CMappedAlignment
• adjustConsensusAndGuide() : ResidueProfiles
• AdjustInput() : oligofar::CGuideFile
• AdjustMatrixSize() : oligofar::CAligner
• adjustment : CSRSearch::SMismatchResultsEntry
• AdjustModelForSequenceAndWindowSize() : CSeqTextWidget
• AdjustProgram() : CBlastOptionsBuilder
• AdjustQueryFromBy() : oligofar::CMappedAlignment
• AdjustQueryFromTo() : oligofar::CMappedAlignment
• AdjustQueryToBy() : oligofar::CMappedAlignment
• AdjustQueryToTo() : oligofar::CMappedAlignment
• AdjustScore() : oligofar::CNcbiqnaBase, CSeq_id
• AdjustSize() : CNCFSOpenFile
• AdjustSubjectFromBy() : oligofar::CMappedAlignment
• AdjustSubjectFromTo() : oligofar::CMappedAlignment
• AdjustSubjectToBy() : oligofar::CMappedAlignment
• AdjustSubjectToTo() : oligofar::CMappedAlignment
• AdjustTestTimeout() : CNcbiTestApplication
• AdjustToLimits() : CGlPane
• AdjustToOrientation() : CRenderingContext
• AdjustViewPort() : CSeqGraphicPane
• adjX : CPhyloForce::calc_two_forces
• adjY : CPhyloForce::calc_two_forces
• adler : z_stream_s
• admin_hosts : SNS_Parameters
• AdminHostValid() : CNetScheduleServer
• advance : xml::impl::node_iterator, BitmapCharRec
• Advance() : CSubjectMap_Factory_Base::CMaskHelper, CDenMapRunIterator< CntType >, CSeqMaskerWindowPatternAmbig, CSeqMaskerWindowPattern, CSeqMaskerWindowAmbig, CSeqMaskerWindow, CPreOrderedOffsetIterator, CPsiBlastIterationState
• AdvancedProteinOptionsHandleFixture() : AdvancedProteinOptionsHandleFixture
• aff_dict_db : SQueueDbBlock
• aff_dict_token_idx : SQueueDbBlock
• aff_id : SAffinityDictTokenIdx, SAffinityDictDB, SAffinityIdx, SQueueDB
• aff_ids : SAffinityInfo
• aff_token : SAffinityJobs
• affinity : CNetScheduleJob
• affinity_idx : SQueueDbBlock
• affinity_token : SJS_Request
• after_call : recursion_info
• AggregateUsage() : CNCMMStats
• aID : AtomPntr
• ait_impl() : xml::impl::ait_impl
• al : _Cur_Aln, _Thd_Tbl
• algMethod : BlockEditingParams
• algorithm_id : SSeqDB_SeqSrc_Data, SBlastDbMaskData
• alias : _character_set_alias, SEnumDescription< TValue >
• align : s_WindowInfo, CAlnTableDS::SAlignment
• Align() : oligofar::TAligner_SW< CQuery, CSubject >, oligofar::TAligner_HSP< CQuery, CSubject >, oligofar::TAligner_fast< CQuery, CSubject >, oligofar::IAligner, oligofar::CAligner, oligofar::CAligner_fast, oligofar::CAligner_HSP, oligofar::CAligner_SW, CNgAligner, CContigAssembly
• align_format_found : SAlignFileRaw, SAlignmentFile
• align_length : CShowBlastDefline::SScoreInfo
• AlignAnnotsValid() : CCdCore
• AlignC() : oligofar::CAligner_fast, oligofar::CAligner_HSP, oligofar::CAligner_SW
• alignDependentFrom : BlockMultipleAlignment
• alignDependentTo : BlockMultipleAlignment
• AlignDiag() : oligofar::CAligner
• aligned : ResidueCell
• aligned_length : CAlnTableDS::SAlignment, CContigAssembly::SAlignStats
• alignedBlockNum : BlockMultipleAlignment::BlockInfo
• AlignedDM() : AlignedDM
• alignedMoleculeID : ChainInfo
• AlignLen() : CGeneModel
• alignMasterFrom : BlockMultipleAlignment
• alignMasterTo : BlockMultipleAlignment
• alignment : hitStr, SequenceViewerWidget_SequenceArea, SequenceViewerWidget_TitleArea, DisplayRowFromString, DisplayRowFromAlignment, ConservationColorer
• alignment_left : distanceReportStr
• alignment_right : distanceReportStr
• AlignmentCollection() : AlignmentCollection
• AlignmentDisplay() : AlignmentDisplay
• AlignmentList : ViewerBase, UpdateViewer, Threader, BLASTer, BlockAligner, BlockMultipleAlignment, AlignmentSet, BlockMultipleAlignment
• alignmentManager : ViewerBase, StructureSet, Threader, BlockMultipleAlignment
• AlignmentManager : AlignmentManager, ViewerBase, SequenceViewer
• AlignmentProfile : ConservationColorer
• alignmentProfile : ConservationColorer
• alignments : ConnectsParalogs, AlignmentSet, DP_MultipleAlignmentResults
• Alignments : CSeqScores, CInstance
• alignmentSet : StructureSet, AlignmentManager
• AlignmentSet() : AlignmentSet
• AlignmentSrc : CCdCore
• AlignmentStack : ViewerBase
• alignmentStack : ViewerBase
• AlignmentUsage : CCdCore
• AlignmentUtility() : AlignmentUtility
• AlignmentWidth() : BlockMultipleAlignment
• AlignQ() : oligofar::CAligner_fast, oligofar::CAligner_HSP, oligofar::CAligner_SW
• AlignQS() : oligofar::CAligner_fast, oligofar::CAligner_HSP, oligofar::CAligner_SW
• AlignSingleCompartment() : CSplign
• AlignsWithNucCount() : CSeqIdAlignBitmap< TSeqAlignSeqIdVec >
• AlignsWithProtCount() : CSeqIdAlignBitmap< TSeqAlignSeqIdVec >
• AlignTail() : oligofar::CAligner
• AlignTailDiag() : oligofar::CAligner
• AlignType : CDisplaySeqalign
• AlignWindow() : oligofar::CAligner
• AlignWinTwoDiag() : oligofar::CAligner
• alilen : hitStr
• ALL_COLUMNS : CwxTableModelNotice
• all_created_models : CHMMParameters::SDetails
• all_options() : pcrecpp::RE_Options
• all_options_ : pcrecpp::RE_Options
• all_seq_ids : SFastaFileMap::SFastaEntry
• all_set_block() : bm::all_set< T >::all_set_block
• AllFinite() : CDistMethods
• AllIntervals() : CIntervalTree
• Alloc() : CSeqDBAtlas, CDynamicCharArray, CMemPot
• alloc() : COffsetList::CDataPool
• alloc_ : bm::serializer< BV >, bm::blocks_manager< Alloc, MS >, tree< T, tree_node_allocator >
• alloc_bit_block() : bm::mem_alloc< BA, PA >
• alloc_gap_block() : bm::mem_alloc< BA, PA >
• alloc_ptr() : bm::mem_alloc< BA, PA >
• alloc_size : SBufChunkTag
• Allocate() : CObjectMemoryPoolChunk, CQueueDbBlockArray, CSeedRoots, CObjectMemoryPool, AMatrix_base
• allocate() : pool_ptr_allocator, pool_block_allocator, CBV_PoolBlockAlloc< BA, Lock >, bm::bit_block_guard< BlocksManager >, bm::ptr_allocator, bm::block_allocator, _STLP_alloc_proxy< _Value, _Tp, _MaybeReboundAlloc >
• allocate_gap_block() : bm::blocks_manager< Alloc, MS >
• allocate_tempblock() : bm::bvector< Alloc, MS >
• AllocateBlock() : CNCMMSizePool
• allocated : SQueueDbBlock, BlastHSPList, BlastInitHitList
• allocated_size : SPHIQueryInfo
• allocator_type : CBV_PoolBlockAlloc< BA, Lock >, bm::deserializer< BV, DEC >, bm::serializer< BV >, bm::blocks_manager< Alloc, MS >, bm::bvector< Alloc, MS >, _Alloc_traits< _Tp, _Allocator >, hashtable< _Val, _Key, _HF, _ExK, _EqK, _All >
• AllocMemory() : CNCMMCentral
• AllocNode() : CIntervalTree
• AllocNodeIntervals() : CIntervalTree
• Allow() : CArgAllow_Strings
• allow_opposite_strand : CGeneSelector
• allow_partialalts : CGeneSelector
• allowedOverlapWithCDRow : CdUpdateParameters
• AllowIDsEndingWithMinus() : ASNLexer
• AllowMerge() : CTextViewFactory
• AllowSigPipe() : CSocketAPI
• AllowTranslocations() : CAlignCleanup
• AllowVar() : CDataType
• AllPresent() : CAutoDefAvailableModifier
• AllResiduesInRangeAligned() : CCdCore
• AllTableNames() : CTableNames
• AllUnique() : CAutoDefAvailableModifier
• allUnstSeqCheck : BMARefinerOptionsDialog
• aln_range : CDisplaySeqalign::SAlnSeqlocInfo, CDisplaySeqalign::SAlnFeatureInfo, CAlnSpanVertModel::SSpanRow
• aln_start : CDisplaySeqalign::SInsertInformation
• AlnGraphicDisplay() : CAlnGraphic
• alnLocAfter : UnalignedInterval
• alnLocBefore : UnalignedInterval
• alnvec : CDisplaySeqalign::SAlnInfo
• alpha : AtomStyle, OpenGLRenderer::SphereInfo
• alphabet : SAlignFileRaw, Alpha, SSequenceInfo
• alphabet_code : Blast_ResComp, Blast_ResFreq, BlastScoreBlk
• alphabet_size : _PSIMsa, NeighborInfo, BlastScoreBlk, PSIDiagnosticsResponse, BlastRPSLookupTable, BlastCompressedAaLookupTable, BlastAaLookupTable
• alphabet_start : BlastScoreBlk
• alphabetSize : Kappa_compactSearchItems
• AlphabetSize : _Seq_Mtf
• alphaflag : Alpha
• alphaID : Residue
• alphaindex : Alpha
• alphasize : Alpha
• alphsize : ReNewtonSystem
• als : _Gib_Scd
• altConfID : AtomCoord
• alternate : IDictionary::SAlternate
• altfrac : CGeneSelector
• AltGetDataType() : CDBL_Result
• AltGetItem() : CDBL_Result
• AlwaysSyncStructures() : ViewerWindowBase
• AlwaysTranslateCDS() : CFlatFileConfig
• AMatrix() : AMatrix
• AMatrix_base() : AMatrix_base
• ambig : CSeqMaskerWindowPatternAmbig, CSeqMaskerWindowAmbig
• ambig_occupy : BlastScoreBlk
• ambig_size : BlastScoreBlk
• ambig_unit : CSeqMaskerWindowPatternAmbig, CSeqMaskerWindowAmbig, CSeqMaskerIstat
• AmbigUnit() : CSeqMaskerIstat
• ambiguous_res : BlastScoreBlk
• amin : CAnyIntron
• an : CBestIntron
• AnalyzeDefines() : CMsvcConfigure
• AnalyzeMakeIn() : SMakeProjectT
• AnalyzeProjItem() : CCyclicDepends
• AnalyzeProjItemNew() : CCyclicDepends
• AnalyzeRowShifts() : CBMARefinerLOOPhase
• AnalyzeSeqs() : CReadBlastApp
• AnalyzeSeqsViaBioseqs() : CReadBlastApp
• AnalyzeSeqsViaBioseqs1() : CReadBlastApp
• Anchor : pcrecpp::RE
• ANCHOR_BOTH : pcrecpp::RE
• ANCHOR_START : pcrecpp::RE
• And() : mu::ParserInt
• and_bit_no_check() : bm::bvector< Alloc, MS >
• ANIM_FRAMES : StructureWindow
• ANIM_SPIN : StructureWindow
• AnimationControls() : AnimationControls
• animationMode : StructureWindow
• animationTimer : StructureWindow
• annot : CInsertAnnotManager
• annot2obj_db : SLDS_TablesCollection
• annot_db : SLDS_TablesCollection
• annot_id : SLDS_Annot2ObjectDB, SLDS_AnnotDB
• annot_in : CInsertAnnotManager
• annot_object : SAnnotPiece
• annot_type : SLDS_AnnotDB
• AnnotateDialog() : AnnotateDialog
• annotateLeafNode() : SeqTreeAPI
• annotateTreeByMembership() : SeqTreeAPI
• annotateTreeByTaxonomy() : SeqTreeAPI
• AnnotationEditorDialog() : AnnotationEditorDialog
• AnnotDescrCit : CCdAnnotationInfo
• AnnotDescrIt : CCdAnnotationInfo
• AnnotDescrMap : CCdAnnotationInfo
• annotSet : CDDAnnotateDialog
• Any() : oligofar::CNcbi8naBase, oligofar::CNcbiqnaBase, oligofar::CIupacnaBase
• any() : bm::bvector< Alloc, MS >
• anycost : CBestIntron
• AnyPending() : CJobStatusTracker
• AnyPresent() : CAutoDefAvailableModifier
• AnyType() : AnyType
• AOutputFormatter() : oligofar::AOutputFormatter
• apd : _hstmt
• app_name : tds_connection, tds_login
• Append() : CAmbiguousRegion, CSeqportUtil_implementation, pythonpp::CList, CMemStore, C_SA_Storage, CMsvcProjectMakefile, CTrSequence< bitst, bitsc >, CTrVector< T >, CSeqIdList, CTrackedSeeds_Base< NHITS >, CTar, CSeqportUtil, CMSModSpecSet, CLayoutGroup, CObjectList, CLayout, CVariant, CDB_Text, CDB_Stream, CBDB_File, CBDB_BLobFile, CStringUTF8, CHitList
• append_child() : tree< T, tree_node_allocator >
• append_children() : tree< T, tree_node_allocator >
• append_misc_feature() : CReadBlastApp
• appendAlignment() : MultipleAlignment
• AppendBioseq() : COMSSASearch
• AppendCell() : CHTML_tr_Cache, CHTML_tr
• AppendChild() : CNCBINode
• AppendClientIPSessionID() : SNetCacheAPIImpl
• AppendFwd() : CTrSequence< bitst, bitsc >, CTrVector< T >
• AppendGi() : CInputGiList
• AppendGroup() : CHTML_select
• AppendHTMLText() : CHTMLNode
• AppendId() : CBinaryListBuilder
• AppendIdList() : CBinaryListBuilder
• AppendInteger() : CBitVectorEncoder
• AppendItem() : CTrSequence< bitst, bitsc >, CTrVector< T >, CHTMLListElement
• AppendIupacaa() : CSeqportUtil_implementation
• AppendIupacna() : CSeqportUtil_implementation
• AppendLongStringData() : CObjectIStreamAsn
• AppendMenuItem() : CUICommandRegistry, CUICommand
• AppendMenuItems() : CUICommandRegistry, CwxTableListCtrl, CObjectListWidget, CAlnSpanWidget, CTaskTablePanel, CEventTablePanel, CSelectionPanel, CDataMiningPanel
• AppendNcbi2na() : CSeqportUtil_implementation
• AppendNcbi4na() : CSeqportUtil_implementation
• AppendNcbieaa() : CSeqportUtil_implementation
• AppendNcbistdaa() : CSeqportUtil_implementation
• AppendOption() : CHTML_select, CHTML_optgroup
• AppendPlainText() : CHTMLNode
• AppendRange() : CBitVectorEncoder
• AppendRev() : CTrSequence< bitst, bitsc >, CTrVector< T >
• AppendRow() : CHTML_table
• AppendRun() : CJob
• AppendScript() : CHTML_script
• AppendSearch() : COMSSASearch
• AppendSeqId() : CInputGiList
• AppendSimple() : CTrackedSeeds_Base< NHITS >
• AppendStringData() : CObjectIStreamAsn
• AppendTags() : CQueue
• AppendTerm() : CHTML_dl
• AppendTool() : CUICommandRegistry
• AppendTranscript() : oligofar::CAligner
• AppendTranscriptItem() : oligofar::CAligner
• AppInit() : COMSSA, COMSSABase
• AppInitialize() : CMultiReaderApp
• applicationName : FileMessagingManager
• AppliesTo() : CAgpErr
• Apply() : pythonpp::CCalable, IPropertiesPanel, CGlMaterial, CGlLight, CTaxNRCriteria, CNRCriteria
• apply() : xslt::stylesheet
• ApplyAccelerators() : CUICommandRegistry
• ApplyAndRemove() : CTaxNRCriteria, CNRCriteria, CBaseNRCriteria
• applyB : ShowHideDialog
• ApplyBinOprt() : mu::ParserBase
• ApplyDefaultScoringMethod() : CSGAlignmentDS
• ApplyEndShiftToRange() : CdBlaster
• ApplyFilter() : CSnpTableModel
• ApplyFiltering() : CwxTableListCtrl
• ApplyFunc() : mu::ParserBase
• ApplyGL() : CGlArcBall
• ApplyLayout() : CWindowManager, CDockManager, CDockContainer, CWindowManagerService, IWindowManagerService
• ApplyNumFunc() : mu::ParserBase
• ApplyRanges() : CSubjectRangesSet
• ApplySorting() : CwxTableListCtrl
• ApplyStrFunc() : mu::ParserBase
• AppMain() : CNcbiApplication
• AppResources() : AppResources
• Approve() : CRequestRateControl
• ApproveMessage() : CDiagContext
• ApproveTime() : CRequestRateControl
• AppStart() : CNcbiApplication, CCgiApplication
• AppStop() : CNcbiApplication, CCgiApplication
• aqi : _Rnd_Smp
• arch : SHINFO_Params
• ard : _hstmt
• areaHeight : SequenceViewerWidget_SequenceArea
• areaWidth : SequenceViewerWidget_SequenceArea
• AreIndelsAllowed() : oligofar::CAligner::CIndelLimits, oligofar::CAligner::CMaxGapLengths
• AreNonOverlapping() : AlignmentCollection
• AreObjectsSet() : CDotMatrixViewManager
• ArePartialsAtSpliceSitesOrGaps() : CValidError_feat
• AreSetsUnique() : CPCRSetList
• AreSimilar() : CModelCompare
• arg : SSERV_IterTag, SHostInfoTag, SHEAP_tag
• Arg() : pcrecpp::Arg
• arg_ : pcrecpp::Arg
• arglen : SSERV_IterTag
• argList : CDbapiTest
• args : SPipeConnector, SNSProtoCmdDef< Extra >, SSERV_HttpInfo, SSERV_NcbidInfo, SConnNetInfo
• ArgsToChainer() : CChainerArgUtil
• ArgsToSplign() : CSplignArgUtil
• ArgToRes() : CQueryFunction_BV_Base< BV >
• ARH_GetVPPosByWindowPos() : IAlignRowHost, CAlnMultiPane
• ARH_OnRowChanged() : IAlignRowHost, CAlnMultiPane
• arr1 : EState
• arr2 : EState
• arr_ : bm::blocks_manager< Alloc, MS >::block_count_arr_func
• ArrangePtrsPacked() : CBDB_BufferManager
• ArrangePtrsUnpacked() : CBDB_BufferManager
• array : tdsvarchar, tdsvarbinary, tdsnumeric, DBNUMERIC, _cs_varbinary, _cs_numeric, BlastCompo_Heap
• array_map() : array_map< K, V, Cmp, kCapacityIncrement >
• array_set() : array_set< T, Cmp >
• ArrayTextOut() : CGlBitmapFont
• arrowBaseWidthProportion : ObjectStyle
• arrowLength : ObjectStyle
• arrowTipWidthProportion : HelixStyle
• AsAlignmentText() : CSplignFormatter
• AsAscii() : oligofar::CColorTwoBase, CStringUTF8
• AsBits() : oligofar::CBitHacks
• AsBoolean() : CArg_Boolean, CArg_String, CArg_NoValue, CPluginValue, CPluginArg, CArgValue
• AsByte() : CWig2tableApplication::SStat
• AsciiDump() : mu::ParserByteCode
• AScoreWithParam() : oligofar::AScoreWithParam
• AsCTime() : CDate_std, CDate
• AsDiscSeg() : CSpliced_seg
• AsDouble() : CArg_Double, CArg_String, CArg_NoValue, CPluginValue, CPluginArg, CArgValue
• AsExonTable() : CSplignFormatter
• asFASTA : SequenceViewer
• asFASTAa2m : SequenceViewer
• AsFastaString() : CTextseq_id, CSeq_id, CPDB_seq_id, CPatent_seq_id
• asHTML : SequenceViewer
• ASin() : mu::Parser
• ASinh() : mu::Parser
• AsInputFile() : CArg_InputFile, CArg_String, CArg_NoValue, CPluginValue, CPluginArg, CTmpFile, CArgValue
• AsInt8() : CArg_Int8, CArg_String, CArg_NoValue, CArgValue
• AsInteger() : CArg_Integer, CArg_String, CArg_NoValue, CPluginValue, CPluginArg, CArgValue
• asize : CSeqMaskerUsetArray
• Ask() : CRPCClient< TRequest, TReply >, CRemapClient_Base, CMLAClient_Base, CID2Client_Base, CID1Client_Base, CID1Client, CEntrez2Client_Base, CBlast4Client_Base, CGBenchService_Base
• AskAll_builds() : CRemapClient_Base
• AskCitlstpmids() : CMLAClient_Base
• AskCitmatch() : CMLAClient_Base
• AskCitmatchpmid() : CMLAClient_Base
• AskEval_boolean() : CEntrez2Client_Base
• AskFeedback() : CGBenchService_Base
• AskFini() : CMLAClient_Base, CID1Client_Base
• AskFinish_params() : CBlast4Client_Base
• AskGet_blob_id() : CID2Client_Base
• AskGet_blob_info() : CID2Client_Base
• AskGet_chunks() : CID2Client_Base
• AskGet_databases() : CBlast4Client_Base
• AskGet_docsum() : CEntrez2Client_Base
• AskGet_info() : CEntrez2Client_Base
• AskGet_link_counts() : CEntrez2Client_Base
• AskGet_linked() : CEntrez2Client_Base
• AskGet_links() : CEntrez2Client_Base
• AskGet_matrices() : CBlast4Client_Base
• AskGet_packages() : CID2Client_Base
• AskGet_parameters() : CBlast4Client_Base
• AskGet_paramsets() : CBlast4Client_Base
• AskGet_programs() : CBlast4Client_Base
• AskGet_request_info() : CBlast4Client_Base
• AskGet_search_results() : CBlast4Client_Base
• AskGet_seq_id() : CID2Client_Base
• AskGet_sequence_parts() : CBlast4Client_Base
• AskGet_sequences() : CBlast4Client_Base
• AskGet_term_hierarchy() : CEntrez2Client_Base
• AskGet_term_list() : CEntrez2Client_Base
• AskGet_term_pos() : CEntrez2Client_Base
• AskGetaccpmids() : CMLAClient_Base
• AskGetaccuids() : CMLAClient_Base
• AskGetblobinfo() : CID1Client_Base
• AskGetgi() : CID1Client_Base
• AskGetgihist() : CID1Client_Base
• AskGetgirev() : CID1Client_Base
• AskGetgistate() : CID1Client_Base
• AskGetmle() : CMLAClient_Base
• AskGetmlepmid() : CMLAClient_Base
• AskGetmleuid() : CMLAClient_Base
• AskGetmlrpmid() : CMLAClient_Base
• AskGetmlruid() : CMLAClient_Base
• AskGetmripmids() : CMLAClient_Base
• AskGetmriuids() : CMLAClient_Base
• AskGetpub() : CMLAClient_Base
• AskGetpubpmid() : CMLAClient_Base
• AskGetsefromgi() : CID1Client_Base, CID1Client
• AskGetseqidsfromgi() : CID1Client_Base
• AskGetsewithinfo() : CID1Client_Base
• AskGettitle() : CMLAClient_Base
• AskInit() : CMLAClient_Base, CID2Client_Base, CID1Client_Base, CGBenchService_Base
• AskMaps_from_builds() : CRemapClient_Base
• AskMaps_to_builds() : CRemapClient_Base
• AskPmidtouid() : CMLAClient_Base
• AskQueue_search() : CBlast4Client_Base
• AskReget_blob() : CID2Client_Base
• AskRemap() : CRemapClient_Base
• AskUidtopmid() : CMLAClient_Base
• AskVersion_update() : CGBenchService_Base
• AsLatin1() : CWString, CStringUTF8
• AsList() : CPluginArg
• AsMatrix() : CDistanceMatrix
• ASNDataManager() : ASNDataManager
• ASNInputContainerStream() : ASNInputContainerStream< ASNContainerClass, ASNElementClass >
• ASNLexer() : ASNLexer
• AsnMemoryRead() : AsnMemoryRead
• AsnMemoryWrite() : AsnMemoryWrite
• asnNode : TreeNodePair
• AsNotNullString() : CVariant
• ASNParser() : ASNParser
• AsObject() : CPluginValue, CPluginArg
• AsOutputFile() : CArg_OutputFile, CArg_String, CArg_NoValue, CPluginValue, CPluginArg, CTmpFile, CArgValue
• AsPersistentString() : IWMClient::CFingerprint
• AsPointer() : CMultiAlignerOptions::CPattern
• AsProject() : CPluginValue, CPluginArg
• asPSSM : SequenceViewer
• AsQueryString() : CEUtils_IdGroupSet, CEUtils_IdGroup
• AsSecretString() : CPluginValue, CPluginArg
• AssembleSeq() : CFastaMapper, CFastaReader
• AsSeqAlign() : CNWFormatter
• AsSeqAlignSet() : CCompartmentAccessor< THit >, CSplignFormatter
• AssertArrayIndex() : CSeriesBase
• AssertValid() : CObjectList
• AssessImpact() : IRWRegistry
• Assign() : CCharVectorFunctions< Char >, CCharPtrFunctions< T >, CPrimitiveTypeInfoIntFunctions< T >, CNullBoolFunctions, CPrimitiveTypeFunctions< T >, CSeqDB_Path, CSeqDB_BasePath, CSeqDB_DirName, CSeqDB_FileName, CTrSequence< bitst, bitsc >, CTrVector< T >, oligofar::CMappedAlignment, CMSMatchedPeak, CIntervalTree, CTypeInfo, CSerialObject, CPackString, CTypeRef, CVoidTypeFunctions, CTimeFunctions, CPrimitiveTypeInfo, CPointerTypeInfo, CReadObjectInfo, CEnumeratedTypeInfo, CContainerTypeInfo, CClassTypeInfo, CChoiceTypeInfo, COldAsnTypeInfo, COctetStringTypeInfo, CSequenceOfTypeInfo, CAliasTypeInfo, CTSE_Info, CSeq_loc, CSeq_id, CDense_seg, mu::ParserTokenReader, mu::ParserToken< TBase, TString >, mu::ParserByteCode, mu::ParserBase, CSeq_feat_Descr, CSeq_id_Descr, CDB_Numeric, CDB_DateTime, CDB_SmallDateTime, CDB_Stream, CDB_String, CWString, CStringUTF8, CExprParser, CNetObjectRef_Base
• assign() : array_set< T, Cmp >, array_map< K, V, Cmp, kCapacityIncrement >, CTempStringEx, CTempString
• AssignAutoColors() : CComboChart
• AssignAutoMarkers() : CComboChart
• AssignBit() : CSeqDB_BitSet
• AssignBitRange() : CSeqDB_BitSet
• AssignCmdParam() : CTL_Cmd
• AssignColorsByScore() : CHitMatrixGraph
• AssignCoordinates() : CBDB_BlobSplitStore< TBV, TObjDeMux, TL >
• AssignCoords() : SNCBlobCoords
• assigned_node : SJobInfo
• AssignFlags() : oligofar::COutputFormatter
• AssignFromChain() : SNCMMChainInfo
• AssignGeneProductNames() : CAutoDefFeatureClause_Base
• AssignMemberDefault() : CClassTypeInfo
• AssignModel() : CwxTableListCtrl
• AssignMolType() : CCustomizedFastaReader, CFastaReader
• AssignNULL() : CDB_Stream, CDB_Object
• AssignTargetSequences() : oligofar::CSeqScanner
• AssignTo() : CPackString::SNode
• AssignTranslated() : CInt_fuzz
• AssignUids() : CEntrez2_id_list
• AssignValue() : CDB_Numeric, CDB_Bit, CDB_DateTime, CDB_SmallDateTime, CDB_Stream, CDB_Double, CDB_Float, CDB_LongBinary, CDB_Binary, CDB_VarBinary, CDB_LongChar, CDB_Char, CDB_VarChar, CDB_BigInt, CDB_TinyInt, CDB_SmallInt, CDB_Int, CDB_Object
• AsSingleByteString() : CStringUTF8
• AsSmartString() : CStopWatch, CTimeSpan
• Associate() : TypeStringAssociator< T >
• AssociateColumn() : CNcbiTable< TValue, TRow, TColumn >
• AssociateRow() : CNcbiTable< TValue, TRow, TColumn >
• AsStdSring() : pythonpp::CString
• AsString() : CArg_String, CArg_NoValue, CWorkerNode, CBlastDBSeqId, CAlnSeqId, IAlnSeqId, CSeq_id_Handle, CObject_id, CPluginValue, CPluginArg, CStopWatch, CTimeSpan, CTime, CArgValue, SServerAddress, CMultiAlignerOptions::CPattern
• asText : SequenceViewer
• AsText() : CNWFormatter
• AsUCS2() : CStringUTF8
• AsUTF8() : CWString
• async_enable : _hsattr, _hcattr
• at : CRCache::CDataPool, CSeqMaskerIstatOBinary, CSeqMaskerIstatOAscii, CSeqMaskerIstatBin, CSeqMaskerIstatAscii, CSeqMaskerIstat, CSRSearch::CMismatchResultsInfo, CSRSearch::CResCache, CBestIntron
• At() : CDynamicCharArray
• at_erase() : array_set< T, Cmp >, array_map< K, V, Cmp, kCapacityIncrement >
• at_insert() : array_set< T, Cmp >, array_map< K, V, Cmp, kCapacityIncrement >
• ATan() : mu::Parser
• ATanh() : mu::Parser
• atcost : CBestIntron
• AtEnd() : CResizingIterator< TSeq, TVal >, CConstResizingIterator< TSeq, TOut >, CValidError_CI
• AtEOF() : CWigBufferedLineReader, CBufferedLineReader, CMemoryLineReader, CStreamLineReader, ILineReader, CFastaReader
• atime : SHeader
• atime_nsec : CDirEntry::SStat
• atom1 : Bond
• atom2 : Bond
• AtomAltList : AtomSet
• atomCap : BondStyle::EndStyle
• AtomCoord() : AtomCoord
• atomicNumber : Residue::AtomInfo
• AtomicReleaseTo() : CConstRef< C, Locker >, CRef< C, Locker >
• AtomicResetFrom() : CConstRef< C, Locker >, CRef< C, Locker >
• AtomicSwap() : CConstRef< C, Locker >, CRef< C, Locker >
• AtomInfoMap : Residue
• atomInfos : Residue
• AtomMap : AtomSet
• atomMap : AtomSet
• AtomPntr() : AtomPntr
• AtomPntrKey : AtomSet
• AtomSet() : AtomSet
• atomSet : CoordSet
• atomSetList : ChemicalGraph
• AtomSetList : ChemicalGraph
• Attach() : CQueue, CAffinityDict, CSplitParser, CUnsupportedEditSaver, CEditsSaver, IEditSaver, CProjectItem, CBDB_File, CBDB_RawFile
• attach() : bm::bit_block_guard< BlocksManager >
• AttachAlignment() : SequenceViewerWidget, SequenceViewerWidget_SequenceArea
• AttachAnnot() : CSeq_entry_EditHandle, CScope, CScope_Impl, CDataSource, CBioseq_set_EditHandle, CBioseq_EditHandle
• AttachBioseq() : CSeq_entry_EditHandle, CBioseq_set_EditHandle
• AttachClient() : CVisibleRangeService, IVisibleRangeService, CSelectionService, ISelectionService
• AttachContext() : CDataMiningService
• Attached : CBDB_Field
• AttachEntry() : CSeq_entry_EditHandle, CScope, CScope_Impl, CDataSource, CBioseq_set_EditHandle
• AttachJobWatcher() : CWorkerNodeJobWatchers, CGridWorkerNode
• AttachObserver() : CObservable, IObservable
• AttachPopupMenu() : CHTMLNode
• AttachQueryClause() : CBDB_QueryParserEnvironment
• AttachQueryTree() : CQueryParserEnv
• AttachStructureSet() : OpenGLRenderer
• AttachTo() : impl::CResult, impl::CConnection, impl::CSendDataCmd, impl::CBaseCmd, CInterfaceHook< I >
• AttachToPool() : CQueryParserEnv
• AttachToSkeleton() : CBlobSplitterImpl
• AttachTSE() : CDataSource_ScopeInfo
• AttachUserObject() : CQueryParseNode
• AttachView() : CProjectPrx
• AttachVolumeGiList() : CSeqDBVol
• Attlist() : CDataMember
• attlist : CClassTypeStrings::SMemberInfo, CChoiceTypeStrings::SVariantInfo
• attr : xml::attributes::attr, SAttributeSupport, SFileConnector, _hstmt, _hdbc, _henv
• attr_ : xml::impl::ait_impl
• attr_type : CAttrRangeCollection< Attr, Position >
• AttribBlock() : DTDParser
• AttribComments() : DTDElement
• AttributeIsOptional() : CNCBINode
• Attributes() : CNCBINode
• attributes : xml::attributes, SGFFrec, xml::ns, xml::attributes::const_iterator, xml::attributes::iterator
• attrs : CGFFReader::SRecord
• attrs_ : xml::impl::node_impl
• attrs_type : xml::event_parser
• atype : SNSProtoArgument
• au : RefinerAU
• auth_sent : SHttpConnector
• Authenticate() : CGetLoadProcessor, CShutdownProcessor, CWorkerNodeControlServer::IRequestProcessor
• auto_close : SLogData
• auto_ipd : _hcattr
• auto_ptr() : auto_ptr< X >
• auto_ptr< CTL_CursorResultExpl > : CTL_CursorResultExpl
• auto_ptr< CTL_LangCmd > : CTL_LangCmd
• auto_ptr_ref() : auto_ptr< X >::auto_ptr_ref< Y >
• AutoArray() : AutoArray< X, Del >
• autocommit : _hcattr
• AutoCreateDefaultDataSource() : CGenBankUIDataSourceType, CNetBLASTUIDataSourceType, IUIDataSourceType
• AutoCreateVariable() : CExprParser
• AutoHideTrack() : CSeqGraphicConfig
• AutoPtr() : AutoPtr< X, Del >
• aux_info : BlastRPSInfo
• aux_list : tracker
• AuxiliaryManagedWrapperGenerator() : CMsvcTools
• avail_flag : tds_dblib_dbprocess
• avail_in : z_stream_s, bz_stream
• avail_in_expect : EState
• avail_out : z_stream_s, bz_stream
• available_font_sizes : CSeqTextFontList
• Average() : CMarkovChain< 0 >, CMarkovChain< order >
• averageTemperature : AtomCoord
• Avg() : mu::Parser
• avg : CSeqMaskerScoreMeanGlob, CSeqMasker::mitem
• AvLen() : CLorentz
• AvoidLocusColl() : CFlatFileConfig

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