| include/ncbi_pch.hpp [code] | |
| include/ncbi_source_ver.h [code] | |
| include/ncbiconf.h [code] | Front end for a platform-specific configuration summary |
| include/algo/align/contig_assembly/contig_assembly.hpp [code] | |
| include/algo/align/ngalign/alignment_filterer.hpp [code] | |
| include/algo/align/ngalign/alignment_scorer.hpp [code] | |
| include/algo/align/ngalign/banded_aligner.hpp [code] | |
| include/algo/align/ngalign/blast_aligner.hpp [code] | |
| include/algo/align/ngalign/merge_aligner.hpp [code] | |
| include/algo/align/ngalign/ngalign.hpp [code] | |
| include/algo/align/ngalign/ngalign_interface.hpp [code] | |
| include/algo/align/ngalign/result_set.hpp [code] | |
| include/algo/align/ngalign/sequence_set.hpp [code] | |
| include/algo/align/nw/align_exception.hpp [code] | |
| include/algo/align/nw/mm_aligner.hpp [code] | |
| include/algo/align/nw/nw_aligner.hpp [code] | |
| include/algo/align/nw/nw_band_aligner.hpp [code] | |
| include/algo/align/nw/nw_formatter.hpp [code] | |
| include/algo/align/nw/nw_pssm_aligner.hpp [code] | |
| include/algo/align/nw/nw_spliced_aligner.hpp [code] | |
| include/algo/align/nw/nw_spliced_aligner16.hpp [code] | |
| include/algo/align/nw/nw_spliced_aligner32.hpp [code] | |
| include/algo/align/prosplign/compartments.hpp [code] | |
| include/algo/align/prosplign/prosplign.hpp [code] | |
| include/algo/align/prosplign/prosplign_exception.hpp [code] | |
| include/algo/align/splign/splign.hpp [code] | |
| include/algo/align/splign/splign_cmdargs.hpp [code] | |
| include/algo/align/splign/splign_formatter.hpp [code] | |
| include/algo/align/splign/splign_simple.hpp [code] | |
| include/algo/align/util/algo_align_util_exceptions.hpp [code] | |
| include/algo/align/util/align_filter.hpp [code] | |
| include/algo/align/util/align_shadow.hpp [code] | |
| include/algo/align/util/blast_tabular.hpp [code] | |
| include/algo/align/util/compartment_finder.hpp [code] | |
| include/algo/align/util/hit_comparator.hpp [code] | |
| include/algo/align/util/hit_filter.hpp [code] | |
| include/algo/align/util/score_builder.hpp [code] | |
| include/algo/blast/api/bl2seq.hpp [code] | Declares the CBl2Seq (BLAST 2 Sequences) class |
| include/algo/blast/api/blast_advprot_options.hpp [code] | Declares the CBlastAdvancedProteinOptionsHandle class |
| include/algo/blast/api/blast_aux.hpp [code] | Contains C++ wrapper classes to structures in algo/blast/core as well as some auxiliary functions to convert CSeq_loc to/from BlastMask structures |
| include/algo/blast/api/blast_dbindex.hpp [code] | Declarations for indexed blast databases |
| include/algo/blast/api/blast_exception.hpp [code] | Declares the BLAST exception class |
| include/algo/blast/api/blast_mtlock.hpp [code] | C++ version of the initialization for the mutex locking interface |
| include/algo/blast/api/blast_nucl_options.hpp [code] | Declares the CBlastNucleotideOptionsHandle class |
| include/algo/blast/api/blast_options.hpp [code] | Declares class to encapsulate all BLAST options |
| include/algo/blast/api/blast_options_builder.hpp [code] | Declares the CBlastOptionsBuilder class |
| include/algo/blast/api/blast_options_handle.hpp [code] | Declares the CBlastOptionsHandle and CBlastOptionsFactory classes |
| include/algo/blast/api/blast_prot_options.hpp [code] | Declares the CBlastProteinOptionsHandle class |
| include/algo/blast/api/blast_results.hpp [code] | Definition of classes which constitute the results of running a BLAST search |
| include/algo/blast/api/blast_rps_options.hpp [code] | Declares the CBlastRPSOptionsHandle class |
| include/algo/blast/api/blast_seqinfosrc.hpp [code] | Defines interface for retrieving sequence identifiers |
| include/algo/blast/api/blast_seqinfosrc_aux.hpp [code] | Declarations of auxiliary functions using IBlastSeqInfoSrc to retrieve ids and related sequence information |
| include/algo/blast/api/blast_types.hpp [code] | Definitions of special type used in BLAST |
| include/algo/blast/api/blastx_options.hpp [code] | Declares the CBlastxOptionsHandle class |
| include/algo/blast/api/disc_nucl_options.hpp [code] | Declares the CDiscNucleotideOptionsHandle class |
| include/algo/blast/api/effsearchspace_calc.hpp [code] | Declares auxiliary class to calculate the effective search space |
| include/algo/blast/api/hspstream_queue.hpp [code] | C++ implementation of the BlastHSPStream interface for producing results on the fly |
| include/algo/blast/api/local_blast.hpp [code] | |
| include/algo/blast/api/local_db_adapter.hpp [code] | Declares class which provides internal BLAST database representations to the internal BLAST APIs |
| include/algo/blast/api/local_search.hpp [code] | Implementation of the uniform BLAST search interface for searching locally installed BLAST databases |
| include/algo/blast/api/msa_pssm_input.hpp [code] | Defines a concrete strategy to obtain PSSM input data for PSI-BLAST from a multiple sequence alignment file |
| include/algo/blast/api/objmgr_query_data.hpp [code] | NOTE: This file contains work in progress and the APIs are likely to change, please do not rely on them until this notice is removed |
| include/algo/blast/api/objmgrfree_query_data.hpp [code] | NOTE: This file contains work in progress and the APIs are likely to change, please do not rely on them until this notice is removed |
| include/algo/blast/api/phiblast_nucl_options.hpp [code] | Declares the CPHIBlastNuclOptionsHandle class |
| include/algo/blast/api/phiblast_prot_options.hpp [code] | Declares the CPHIBlastProtOptionsHandle class |
| include/algo/blast/api/prelim_stage.hpp [code] | NOTE: This file contains work in progress and the APIs are likely to change, please do not rely on them until this notice is removed |
| include/algo/blast/api/psi_pssm_input.hpp [code] | Defines a concrete strategy to obtain PSSM input data for PSI-BLAST |
| include/algo/blast/api/psibl2seq.hpp [code] | Declares CPsiBl2Seq, the C++ API for the PSI-BLAST 2 Sequences engine |
| include/algo/blast/api/psiblast.hpp [code] | Declares CPsiBlast, the C++ API for the PSI-BLAST engine |
| include/algo/blast/api/psiblast_iteration.hpp [code] | Defines class which represents the iteration state in PSI-BLAST |
| include/algo/blast/api/psiblast_options.hpp [code] | Declares the CPSIBlastOptionsHandle class |
| include/algo/blast/api/pssm_engine.hpp [code] | C++ API for the PSI-BLAST PSSM engine |
| include/algo/blast/api/pssm_input.hpp [code] | Defines interface for a sequence alignment processor that can populate a multiple alignment data structure used by the PSSM engine |
| include/algo/blast/api/query_data.hpp [code] | NOTE: This file contains work in progress and the APIs are likely to change, please do not rely on them until this notice is removed |
| include/algo/blast/api/remote_blast.hpp [code] | Declares the CRemoteBlast class |
| include/algo/blast/api/remote_search.hpp [code] | Remote implementation of the uniform BLAST search interface |
| include/algo/blast/api/repeats_filter.hpp [code] | C++ implementation of repeats filtering for C++ BLAST |
| include/algo/blast/api/rps_aux.hpp [code] | Declares auxiliary classes to manage RPS-BLAST related C-structures |
| include/algo/blast/api/rpstblastn_options.hpp [code] | Declares the CRPSTBlastnOptionsHandle class |
| include/algo/blast/api/seqinfosrc_seqdb.hpp [code] | Defines a concrete strategy for the IBlastSeqInfoSrc interface for sequence identifiers retrieval from a CSeqDB class |
| include/algo/blast/api/seqinfosrc_seqvec.hpp [code] | Defines a concrete strategy for the IBlastSeqInfoSrc interface for sequence identifiers retrieval from a CSeqDB class |
| include/algo/blast/api/seqsrc_multiseq.hpp [code] | Implementation of the BlastSeqSrc interface for a vector of sequence locations |
| include/algo/blast/api/seqsrc_seqdb.hpp [code] | Implementation of the BlastSeqSrc interface using the C++ BLAST databases API |
| include/algo/blast/api/setup_factory.hpp [code] | NOTE: This file contains work in progress and the APIs are likely to change, please do not rely on them until this notice is removed |
| include/algo/blast/api/sseqloc.hpp [code] | Definition of SSeqLoc structure |
| include/algo/blast/api/subj_ranges_set.hpp [code] | Declares classes to maintain lists of subject offset ranges in sequence data for targetted retrieval during the traceback stage |
| include/algo/blast/api/tblastn_options.hpp [code] | Declares the CTBlastnOptionsHandle class |
| include/algo/blast/api/tblastx_options.hpp [code] | Declares the CTBlastxOptionsHandle class |
| include/algo/blast/api/traceback_stage.hpp [code] | NOTE: This file contains work in progress and the APIs are likely to change, please do not rely on them until this notice is removed |
| include/algo/blast/api/uniform_search.hpp [code] | Uniform BLAST Search Interface |
| include/algo/blast/api/version.hpp [code] | |
| include/algo/blast/blastinput/blast_args.hpp [code] | Interface for converting blast-related command line arguments into blast options |
| include/algo/blast/blastinput/blast_fasta_input.hpp [code] | Interface for FASTA files into blast sequence input |
| include/algo/blast/blastinput/blast_input.hpp [code] | Interface for converting sources of sequence data into blast sequence input |
| include/algo/blast/blastinput/blast_input_aux.hpp [code] | Auxiliary classes/functions for BLAST input library |
| include/algo/blast/blastinput/blast_scope_src.hpp [code] | Declares CBlastScopeSource class to create properly configured CScope objects to invoke the BLAST database data loader first and fall back on to the Genbank data loader if the former fails (this is configurable at runtime) |
| include/algo/blast/blastinput/blastn_args.hpp [code] | Main argument class for BLASTN application |
| include/algo/blast/blastinput/blastp_args.hpp [code] | Main argument class for BLASTP application |
| include/algo/blast/blastinput/blastx_args.hpp [code] | Main argument class for BLASTX application |
| include/algo/blast/blastinput/cmdline_flags.hpp [code] | Constant declarations for command line arguments for BLAST programs |
| include/algo/blast/blastinput/psiblast_args.hpp [code] | Main argument class for PSI-BLAST application |
| include/algo/blast/blastinput/rpsblast_args.hpp [code] | Main argument class for RPSBLAST application |
| include/algo/blast/blastinput/rpstblastn_args.hpp [code] | Main argument class for RPS TBLASTN application |
| include/algo/blast/blastinput/tblastn_args.hpp [code] | Main argument class for TBLASTN application |
| include/algo/blast/blastinput/tblastx_args.hpp [code] | Main argument class for TBLASTX application |
| include/algo/blast/composition_adjustment/compo_heap.h [code] | Declares a "heap" data structure that is used to store computed alignments when composition adjustment of scoring matrices is used |
| include/algo/blast/composition_adjustment/compo_mode_condition.h [code] | Declarations of functions used to choose the mode for composition-based statistics |
| include/algo/blast/composition_adjustment/composition_adjustment.h [code] | Definitions used in compositional score matrix adjustment |
| include/algo/blast/composition_adjustment/composition_constants.h [code] | Constants used in compositional score matrix adjustment |
| include/algo/blast/composition_adjustment/matrix_frequency_data.h [code] | Definitions used to get joint probabilities for a scoring matrix |
| include/algo/blast/composition_adjustment/nlm_linear_algebra.h [code] | Declarations for several linear algebra routines |
| include/algo/blast/composition_adjustment/optimize_target_freq.h [code] | Routines for finding an optimal set of target frequencies for the purpose of generating a compositionally adjusted score matrix |
| include/algo/blast/composition_adjustment/redo_alignment.h [code] | Definitions used to redo a set of alignments, using either composition matrix adjustment or the Smith-Waterman algorithm (or both |
| include/algo/blast/composition_adjustment/smith_waterman.h [code] | Definitions for computing Smith-Waterman alignments |
| include/algo/blast/composition_adjustment/unified_pvalues.h [code] | Headers for computing a "composition" p-value of a match, and for computing a unified p-value combining the customary alignment p-value and the new composition p-value |
| include/algo/blast/core/aa_ungapped.h [code] | Protein ungapped extension code |
| include/algo/blast/core/blast_aalookup.h [code] | Routines for creating protein BLAST lookup tables |
| include/algo/blast/core/blast_aascan.h [code] | Routines for creating protein BLAST lookup tables |
| include/algo/blast/core/blast_def.h [code] | Definitions used throughout BLAST |
| include/algo/blast/core/blast_diagnostics.h [code] | Various diagnostics (hit counts, etc |
| include/algo/blast/core/blast_encoding.h [code] | Declarations of static arrays used to define some NCBI encodings to be used in a toolkit independent manner by the BLAST engine |
| include/algo/blast/core/blast_engine.h [code] | Function calls to actually perform a BLAST search (high level) |
| include/algo/blast/core/blast_export.h [code] | Defines to provide correct exporting from BLAST DLL in Windows |
| include/algo/blast/core/blast_extend.h [code] | Ungapped extension structures that are common to nucleotide and protein extension routines |
| include/algo/blast/core/blast_filter.h [code] | BLAST filtering functions |
| include/algo/blast/core/blast_gapalign.h [code] | Structures and functions prototypes used for BLAST gapped extension |
| include/algo/blast/core/blast_hits.h [code] | Structures and API used for saving BLAST hits |
| include/algo/blast/core/blast_hspfilter.h [code] | Declaration of ADT to filter and/or process HSPs in the BLAST engine |
| include/algo/blast/core/blast_hspstream.h [code] | Declaration of ADT to save and retrieve lists of HSPs in the BLAST engine |
| include/algo/blast/core/blast_kappa.h [code] | Header file for composition-based statistics |
| include/algo/blast/core/blast_lookup.h [code] | Common definitions for protein and nucleotide lookup tables |
| include/algo/blast/core/blast_message.h [code] | Structures for BLAST messages |
| include/algo/blast/core/blast_nalookup.h [code] | Routines for creating nucleotide BLAST lookup tables |
| include/algo/blast/core/blast_nascan.h [code] | Routines for scanning nucleotide BLAST lookup tables |
| include/algo/blast/core/blast_options.h [code] | The structures and functions in blast_options |
| include/algo/blast/core/blast_parameters.h [code] | Structure and function definitions for BLAST parameter structures, which are internal to the CORE of BLAST |
| include/algo/blast/core/blast_program.h [code] | Definitions for various programs supported by core BLAST |
| include/algo/blast/core/blast_psi.h [code] | High level definitions and declarations for the PSSM engine of PSI-BLAST |
| include/algo/blast/core/blast_query_info.h [code] | Definitions and functions associated with the BlastQueryInfo structure |
| include/algo/blast/core/blast_rps.h [code] | RPS BLAST structure definitions |
| include/algo/blast/core/blast_seg.h [code] | SEG filtering functions |
| include/algo/blast/core/blast_seqsrc.h [code] | Declaration of ADT to retrieve sequences for the BLAST engine |
| include/algo/blast/core/blast_seqsrc_impl.h [code] | Definitions needed for implementing the BlastSeqSrc interface and low level details of the implementation of the BlastSeqSrc framework |
| include/algo/blast/core/blast_setup.h [code] | Utilities initialize/setup BLAST |
| include/algo/blast/core/blast_stat.h [code] | Definitions and prototypes used by blast_stat.c to calculate BLAST statistics |
| include/algo/blast/core/blast_sw.h [code] | Smith-Waterman alignment for use within the infrastructure of BLAST |
| include/algo/blast/core/blast_toolkit.h [code] | Choose C++ basic defines |
| include/algo/blast/core/blast_traceback.h [code] | Functions to do gapped alignment with traceback |
| include/algo/blast/core/blast_tune.h [code] | Compute a blastn word size appropriate for finding, with high probability, alignments with specified length and percent identity |
| include/algo/blast/core/blast_util.h [code] | Various auxiliary BLAST utility functions |
| include/algo/blast/core/gapinfo.h [code] | Definitions of structures used for saving traceback information |
| include/algo/blast/core/gencode_singleton.h [code] | Defines the interface to interact with the genetic code singleton object |
| include/algo/blast/core/greedy_align.h [code] | Prototypes and structures for greedy gapped alignment |
| include/algo/blast/core/hspfilter_besthit.h [code] | Implementation of a number of BlastHSPWriters to save hits from a BLAST search, and subsequently return them in sorted order |
| include/algo/blast/core/hspfilter_collector.h [code] | Implementation of a number of BlastHSPWriters to save hits from a BLAST search, and subsequently return them in sorted order |
| include/algo/blast/core/hspfilter_culling.h [code] | Implementation of the BlastHSPWriter interface to perform culling |
| include/algo/blast/core/link_hsps.h [code] | Functions to link HSPs using sum statistics |
| include/algo/blast/core/lookup_util.h [code] | Utility functions for lookup table generation |
| include/algo/blast/core/lookup_wrap.h [code] | Wrapper for all lookup tables used in BLAST |
| include/algo/blast/core/mb_indexed_lookup.h [code] | Declarations for functions that extract hits from indexed blast databases (specialized for megablast) |
| include/algo/blast/core/na_ungapped.h [code] | Nucleotide ungapped extension code |
| include/algo/blast/core/ncbi_math.h [code] | Prototypes for portable math library (ported from C Toolkit) |
| include/algo/blast/core/ncbi_std.h [code] | Type and macro definitions from C toolkit that are not defined in C++ toolkit |
| include/algo/blast/core/pattern.h [code] | Functions for finding pattern matches in sequence (PHI-BLAST) |
| include/algo/blast/core/phi_extend.h [code] | Word finder for PHI-BLAST |
| include/algo/blast/core/phi_gapalign.h [code] | Function prototypes used for PHI BLAST gapped extension and gapped extension with traceback |
| include/algo/blast/core/phi_lookup.h [code] | Pseudo lookup table structure and database scanning functions used in PHI-BLAST |
| include/algo/blast/core/split_query.h [code] | |
| include/algo/blast/dbindex/dbindex.hpp [code] | |
| include/algo/blast/dbindex/dbindex_sp.hpp [code] | |
| include/algo/blast/dbindex/sequence_istream.hpp [code] | |
| include/algo/blast/dbindex/sequence_istream_bdb.hpp [code] | |
| include/algo/blast/dbindex/sequence_istream_fasta.hpp [code] | |
| include/algo/blast/dbindex_search/sr_search.hpp [code] | |
| include/algo/blast/format/blast_format.hpp [code] | |
| include/algo/blast/format/blastfmtutil.hpp [code] | |
| include/algo/blast/format/blastxml_format.hpp [code] | |
| include/algo/blast/format/data4xmlformat.hpp [code] | Implementation of interface class to produce data required for generating BLAST XML output |
| include/algo/cobalt/base.hpp [code] | Definitions used by all COBALT aligner components |
| include/algo/cobalt/clusterer.hpp [code] | |
| include/algo/cobalt/cobalt.hpp [code] | |
| include/algo/cobalt/dist.hpp [code] | Interface for CDistances class |
| include/algo/cobalt/exception.hpp [code] | |
| include/algo/cobalt/hit.hpp [code] | |
| include/algo/cobalt/hitlist.hpp [code] | Interface for CHitList class |
| include/algo/cobalt/kmercounts.hpp [code] | |
| include/algo/cobalt/options.hpp [code] | Options for CMultiAligner |
| include/algo/cobalt/patterns.hpp [code] | Interface for default CDD patterns |
| include/algo/cobalt/resfreq.hpp [code] | Interface for CProfileData |
| include/algo/cobalt/seq.hpp [code] | Interface for CSequence class |
| include/algo/cobalt/traceback.hpp [code] | Interface for CEditScript class |
| include/algo/cobalt/tree.hpp [code] | Interface for CTree class |
| include/algo/cobalt/version.hpp [code] | |
| include/algo/dustmask/symdust.hpp [code] | |
| include/algo/gnomon/annot.hpp [code] | |
| include/algo/gnomon/asn1.hpp [code] | |
| include/algo/gnomon/chainer.hpp [code] | |
| include/algo/gnomon/Exon_params.hpp [code] | User-defined methods of the data storage class |
| include/algo/gnomon/Exon_params_.hpp [code] | Data storage class |
| include/algo/gnomon/gnomon.hpp [code] | |
| include/algo/gnomon/gnomon__.hpp [code] | |
| include/algo/gnomon/gnomon_doxygen.h [code] | |
| include/algo/gnomon/gnomon_exception.hpp [code] | |
| include/algo/gnomon/gnomon_model.hpp [code] | |
| include/algo/gnomon/Gnomon_param.hpp [code] | User-defined methods of the data storage class |
| include/algo/gnomon/Gnomon_param_.hpp [code] | Data storage class |
| include/algo/gnomon/Gnomon_params.hpp [code] | User-defined methods of the data storage class |
| include/algo/gnomon/Gnomon_params_.hpp [code] | Data storage class |
| include/algo/gnomon/id_handler.hpp [code] | |
| include/algo/gnomon/Intergenic_params.hpp [code] | User-defined methods of the data storage class |
| include/algo/gnomon/Intergenic_params_.hpp [code] | Data storage class |
| include/algo/gnomon/Intron_params.hpp [code] | User-defined methods of the data storage class |
| include/algo/gnomon/Intron_params_.hpp [code] | Data storage class |
| include/algo/gnomon/Length_distribution_params.hpp [code] | User-defined methods of the data storage class |
| include/algo/gnomon/Length_distribution_params_.hpp [code] | Data storage class |
| include/algo/gnomon/Markov_chain_array.hpp [code] | User-defined methods of the data storage class |
| include/algo/gnomon/Markov_chain_array_.hpp [code] | Data storage class |
| include/algo/gnomon/Markov_chain_params.hpp [code] | User-defined methods of the data storage class |
| include/algo/gnomon/Markov_chain_params_.hpp [code] | Data storage class |
| include/algo/gnomon/NCBI_GNOMON_module.hpp [code] | |
| include/algo/gnomon/set.hpp [code] | |
| include/algo/link_reduce/link_reduce.hpp [code] | |
| include/algo/ms/formats/mshdf5/MsHdf5.hpp [code] | |
| include/algo/ms/formats/mzdata/AcqSpecification.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzdata/AcqSpecification_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzdata/Acquisition.hpp [code] | |
| include/algo/ms/formats/mzdata/Acquisition_.hpp [code] | |
| include/algo/ms/formats/mzdata/Activation.hpp [code] | |
| include/algo/ms/formats/mzdata/Activation_.hpp [code] | |
| include/algo/ms/formats/mzdata/Additional.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzdata/Additional_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzdata/Admin.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzdata/Admin_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzdata/Analyzer.hpp [code] | |
| include/algo/ms/formats/mzdata/Analyzer_.hpp [code] | |
| include/algo/ms/formats/mzdata/AnalyzerList.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzdata/AnalyzerList_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzdata/Contact.hpp [code] | |
| include/algo/ms/formats/mzdata/Contact_.hpp [code] | |
| include/algo/ms/formats/mzdata/CvLookup.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzdata/CvLookup_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzdata/CvParam.hpp [code] | |
| include/algo/ms/formats/mzdata/CvParam_.hpp [code] | |
| include/algo/ms/formats/mzdata/Data.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzdata/Data_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzdata/DataProcessing.hpp [code] | |
| include/algo/ms/formats/mzdata/DataProcessing_.hpp [code] | |
| include/algo/ms/formats/mzdata/Description.hpp [code] | |
| include/algo/ms/formats/mzdata/Description_.hpp [code] | |
| include/algo/ms/formats/mzdata/Detector.hpp [code] | |
| include/algo/ms/formats/mzdata/Detector_.hpp [code] | |
| include/algo/ms/formats/mzdata/Instrument.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzdata/Instrument_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzdata/IntenArrayBinary.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzdata/IntenArrayBinary_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzdata/IonSelection.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzdata/IonSelection_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzdata/MzArrayBinary.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzdata/MzArrayBinary_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzdata/MzData.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzdata/MzData_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzdata/mzData__.hpp [code] | |
| include/algo/ms/formats/mzdata/mzData_doxygen.h [code] | |
| include/algo/ms/formats/mzdata/mzData_module.hpp [code] | |
| include/algo/ms/formats/mzdata/Precursor.hpp [code] | |
| include/algo/ms/formats/mzdata/Precursor_.hpp [code] | |
| include/algo/ms/formats/mzdata/PrecursorList.hpp [code] | |
| include/algo/ms/formats/mzdata/PrecursorList_.hpp [code] | |
| include/algo/ms/formats/mzdata/ProcessingMethod.hpp [code] | |
| include/algo/ms/formats/mzdata/ProcessingMethod_.hpp [code] | |
| include/algo/ms/formats/mzdata/SampleDescription.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzdata/SampleDescription_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzdata/Software.hpp [code] | |
| include/algo/ms/formats/mzdata/Software_.hpp [code] | |
| include/algo/ms/formats/mzdata/Source.hpp [code] | |
| include/algo/ms/formats/mzdata/Source_.hpp [code] | |
| include/algo/ms/formats/mzdata/SourceFile.hpp [code] | |
| include/algo/ms/formats/mzdata/SourceFile_.hpp [code] | |
| include/algo/ms/formats/mzdata/Spectrum.hpp [code] | |
| include/algo/ms/formats/mzdata/Spectrum_.hpp [code] | |
| include/algo/ms/formats/mzdata/SpectrumDesc.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzdata/SpectrumDesc_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzdata/SpectrumInstrument.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzdata/SpectrumInstrument_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzdata/SpectrumList.hpp [code] | |
| include/algo/ms/formats/mzdata/SpectrumList_.hpp [code] | |
| include/algo/ms/formats/mzdata/SpectrumSettings.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzdata/SpectrumSettings_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzdata/SupDataArray.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzdata/SupDataArray_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzdata/SupDataArrayBinary.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzdata/SupDataArrayBinary_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzdata/SupDataDesc.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzdata/SupDataDesc_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzdata/SupDesc.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzdata/SupDesc_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzdata/SupSourceFile.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzdata/SupSourceFile_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzdata/UserParam.hpp [code] | |
| include/algo/ms/formats/mzdata/UserParam_.hpp [code] | |
| include/algo/ms/formats/mzml/Acquisition.hpp [code] | |
| include/algo/ms/formats/mzml/Acquisition_.hpp [code] | |
| include/algo/ms/formats/mzml/AcquisitionList.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/AcquisitionList_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/AcquisitionSettings.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/AcquisitionSettings_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/AcquisitionSettingsList.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/AcquisitionSettingsList_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/Activation.hpp [code] | |
| include/algo/ms/formats/mzml/Activation_.hpp [code] | |
| include/algo/ms/formats/mzml/Analyzer.hpp [code] | |
| include/algo/ms/formats/mzml/Analyzer_.hpp [code] | |
| include/algo/ms/formats/mzml/BinaryDataArray.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/BinaryDataArray_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/BinaryDataArrayList.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/BinaryDataArrayList_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/Chromatogram.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/Chromatogram_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/ChromatogramList.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/ChromatogramList_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/ComponentList.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/ComponentList_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/Contact.hpp [code] | |
| include/algo/ms/formats/mzml/Contact_.hpp [code] | |
| include/algo/ms/formats/mzml/Cv.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/Cv_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/CvList.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/CvList_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/CvParam.hpp [code] | |
| include/algo/ms/formats/mzml/CvParam_.hpp [code] | |
| include/algo/ms/formats/mzml/DataProcessing.hpp [code] | |
| include/algo/ms/formats/mzml/DataProcessing_.hpp [code] | |
| include/algo/ms/formats/mzml/DataProcessingList.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/DataProcessingList_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/Detector.hpp [code] | |
| include/algo/ms/formats/mzml/Detector_.hpp [code] | |
| include/algo/ms/formats/mzml/FileContent.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/FileContent_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/FileDescription.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/FileDescription_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/InstrumentConfiguration.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/InstrumentConfiguration_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/InstrumentConfigurationLis.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/InstrumentConfigurationLis_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/IsolationWindow.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/IsolationWindow_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/MzML.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/MzML_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/mzML__.hpp [code] | |
| include/algo/ms/formats/mzml/mzML_doxygen.h [code] | |
| include/algo/ms/formats/mzml/mzML_module.hpp [code] | |
| include/algo/ms/formats/mzml/Precursor.hpp [code] | |
| include/algo/ms/formats/mzml/Precursor_.hpp [code] | |
| include/algo/ms/formats/mzml/PrecursorList.hpp [code] | |
| include/algo/ms/formats/mzml/PrecursorList_.hpp [code] | |
| include/algo/ms/formats/mzml/ProcessingMethod.hpp [code] | |
| include/algo/ms/formats/mzml/ProcessingMethod_.hpp [code] | |
| include/algo/ms/formats/mzml/ReferenceableParamGroup.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/ReferenceableParamGroup_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/ReferenceableParamGroupLis.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/ReferenceableParamGroupLis_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/ReferenceableParamGroupRef.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/ReferenceableParamGroupRef_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/Run.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/Run_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/Sample.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/Sample_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/SampleList.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/SampleList_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/Scan.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/Scan_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/ScanWindow.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/ScanWindow_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/ScanWindowList.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/ScanWindowList_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/SelectedIon.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/SelectedIon_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/SelectedIonList.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/SelectedIonList_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/Software.hpp [code] | |
| include/algo/ms/formats/mzml/Software_.hpp [code] | |
| include/algo/ms/formats/mzml/SoftwareList.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/SoftwareList_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/SoftwareParam.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/SoftwareParam_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/SoftwareRef.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/SoftwareRef_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/Source.hpp [code] | |
| include/algo/ms/formats/mzml/Source_.hpp [code] | |
| include/algo/ms/formats/mzml/SourceFile.hpp [code] | |
| include/algo/ms/formats/mzml/SourceFile_.hpp [code] | |
| include/algo/ms/formats/mzml/SourceFileList.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/SourceFileList_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/SourceFileRef.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/SourceFileRef_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/SourceFileRefList.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/SourceFileRefList_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/Spectrum.hpp [code] | |
| include/algo/ms/formats/mzml/Spectrum_.hpp [code] | |
| include/algo/ms/formats/mzml/SpectrumDescription.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/SpectrumDescription_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/SpectrumList.hpp [code] | |
| include/algo/ms/formats/mzml/SpectrumList_.hpp [code] | |
| include/algo/ms/formats/mzml/Target.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/Target_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/TargetList.hpp [code] | User-defined methods of the data storage class |
| include/algo/ms/formats/mzml/TargetList_.hpp [code] | Data storage class |
| include/algo/ms/formats/mzml/UserParam.hpp [code] | |
| include/algo/ms/formats/mzml/UserParam_.hpp [code] | |
| include/algo/ms/formats/unimod/Mod.hpp [code] | |
| include/algo/ms/formats/unimod/Unimod.hpp [code] | User-defined methods of the data storage class |
| include/algo/phy_tree/bio_tree.hpp [code] | Things for representing and manipulating bio trees |
| include/algo/phy_tree/bio_tree_conv.hpp [code] | |
| include/algo/phy_tree/dist_methods.hpp [code] | |
| include/algo/phy_tree/phy_node.hpp [code] | |
| include/algo/phy_tree/tree_to_dist_mat.hpp [code] | |
| include/algo/seqqa/blastp_tests.hpp [code] | |
| include/algo/seqqa/prot_prod_tests.hpp [code] | |
| include/algo/seqqa/seq_id_tests.hpp [code] | |
| include/algo/seqqa/seqtest.hpp [code] | |
| include/algo/seqqa/single_aln_tests.hpp [code] | |
| include/algo/seqqa/xcript_tests.hpp [code] | |
| include/algo/sequence/align_cleanup.hpp [code] | |
| include/algo/sequence/align_group.hpp [code] | |
| include/algo/sequence/annot_compare.hpp [code] | |
| include/algo/sequence/antigenic.hpp [code] | |
| include/algo/sequence/coiled_coil.hpp [code] | |
| include/algo/sequence/compare_feats.hpp [code] | |
| include/algo/sequence/consensus_splice.hpp [code] | |
| include/algo/sequence/cpg.hpp [code] | |
| include/algo/sequence/find_pattern.hpp [code] | |
| include/algo/sequence/gene_model.hpp [code] | |
| include/algo/sequence/loc_mapper.hpp [code] | |
| include/algo/sequence/make_cdr_prods.hpp [code] | |
| include/algo/sequence/masking_delta.hpp [code] | |
| include/algo/sequence/nuc_prop.hpp [code] | |
| include/algo/sequence/orf.hpp [code] | |
| include/algo/sequence/polya.hpp [code] | |
| include/algo/sequence/prot_prop.hpp [code] | |
| include/algo/sequence/regexp_loc.hpp [code] | Header file for creating CSeq_locs from CRegexps |
| include/algo/sequence/restriction.hpp [code] | |
| include/algo/sequence/seq_match.hpp [code] | |
| include/algo/sequence/signal_seq.hpp [code] | |
| include/algo/sequence/util.hpp [code] | |
| include/algo/structure/MSAAInterface.hpp [code] | |
| include/algo/structure/bma_refine/AlignRefineScorer.hpp [code] | |
| include/algo/structure/bma_refine/BlockBoundaryAlgorithm.hpp [code] | |
| include/algo/structure/bma_refine/BlockEditor.hpp [code] | |
| include/algo/structure/bma_refine/BMAUtils.hpp [code] | |
| include/algo/structure/bma_refine/ColumnScorer.hpp [code] | |
| include/algo/structure/bma_refine/diagnosticDefs.hpp [code] | |
| include/algo/structure/bma_refine/Interface.hpp [code] | |
| include/algo/structure/bma_refine/InterfaceGUI.hpp [code] | |
| include/algo/structure/bma_refine/RefinerCycle.hpp [code] | |
| include/algo/structure/bma_refine/RefinerDefs.hpp [code] | |
| include/algo/structure/bma_refine/RefinerEngine.hpp [code] | |
| include/algo/structure/bma_refine/RefinerPhase.hpp [code] | |
| include/algo/structure/bma_refine/RefinerTrial.hpp [code] | |
| include/algo/structure/bma_refine/RowSelector.hpp [code] | |
| include/algo/structure/cd_utils/cuAlign.hpp [code] | |
| include/algo/structure/cd_utils/cuAlignedDM.hpp [code] | |
| include/algo/structure/cd_utils/cuAlignmentCollection.hpp [code] | |
| include/algo/structure/cd_utils/cuBaseClusterer.hpp [code] | |
| include/algo/structure/cd_utils/cuBlast2Seq.hpp [code] | |
| include/algo/structure/cd_utils/cuBlock.hpp [code] | |
| include/algo/structure/cd_utils/cuBlockExtender.hpp [code] | |
| include/algo/structure/cd_utils/cuBlockFormater.hpp [code] | |
| include/algo/structure/cd_utils/cuBlockIntersector.hpp [code] | |
| include/algo/structure/cd_utils/cuCD.hpp [code] | |
| include/algo/structure/cd_utils/cuCdAnnotation.hpp [code] | |
| include/algo/structure/cd_utils/cuCdBlaster.hpp [code] | |
| include/algo/structure/cd_utils/cuCdCore.hpp [code] | |
| include/algo/structure/cd_utils/cuCdFamily.hpp [code] | |
| include/algo/structure/cd_utils/cuCdFromFasta.hpp [code] | |
| include/algo/structure/cd_utils/cuCdReadWriteASN.hpp [code] | |
| include/algo/structure/cd_utils/cuCdUpdateParameters.hpp [code] | |
| include/algo/structure/cd_utils/cuCdUpdater.hpp [code] | |
| include/algo/structure/cd_utils/cuConsensusMaker.hpp [code] | |
| include/algo/structure/cd_utils/cuCppNCBI.hpp [code] | |
| include/algo/structure/cd_utils/cuDbPriority.hpp [code] | |
| include/algo/structure/cd_utils/cuDistmat.hpp [code] | |
| include/algo/structure/cd_utils/cuDmAlignedOptimalScore.hpp [code] | |
| include/algo/structure/cd_utils/cuDmAlignedscore.hpp [code] | |
| include/algo/structure/cd_utils/cuDmBlastscore.hpp [code] | |
| include/algo/structure/cd_utils/cuDmIdentities.hpp [code] | |
| include/algo/structure/cd_utils/cuFlexiDm.hpp [code] | |
| include/algo/structure/cd_utils/cuGlobalDefs.hpp [code] | |
| include/algo/structure/cd_utils/cuHitsDistributor.hpp [code] | |
| include/algo/structure/cd_utils/cuMatrix.hpp [code] | |
| include/algo/structure/cd_utils/cuMFastaReader.hpp [code] | |
| include/algo/structure/cd_utils/cuNRCriteria.hpp [code] | |
| include/algo/structure/cd_utils/cuPrefTaxNodes.hpp [code] | |
| include/algo/structure/cd_utils/cuPssmMaker.hpp [code] | |
| include/algo/structure/cd_utils/cuPssmScorer.hpp [code] | |
| include/algo/structure/cd_utils/cuReadFastaWrapper.hpp [code] | |
| include/algo/structure/cd_utils/cuResidueProfile.hpp [code] | |
| include/algo/structure/cd_utils/cuRowSourceTable.hpp [code] | |
| include/algo/structure/cd_utils/cuScoringMatrix.hpp [code] | |
| include/algo/structure/cd_utils/cuSeqAnnotFromFasta.hpp [code] | |
| include/algo/structure/cd_utils/cuSeqSwapper.hpp [code] | |
| include/algo/structure/cd_utils/cuSeqtree.hpp [code] | |
| include/algo/structure/cd_utils/cuSeqTreeAlg.hpp [code] | |
| include/algo/structure/cd_utils/cuSeqTreeAPI.hpp [code] | |
| include/algo/structure/cd_utils/cuSeqTreeAsnizer.hpp [code] | |
| include/algo/structure/cd_utils/cuSeqTreeFactory.hpp [code] | |
| include/algo/structure/cd_utils/cuSeqTreeLayout.hpp [code] | |
| include/algo/structure/cd_utils/cuSeqTreeNj.hpp [code] | |
| include/algo/structure/cd_utils/cuSeqTreeRootedLayout.hpp [code] | |
| include/algo/structure/cd_utils/cuSeqTreeSlc.hpp [code] | |
| include/algo/structure/cd_utils/cuSeqTreeStream.hpp [code] | |
| include/algo/structure/cd_utils/cuSequence.hpp [code] | |
| include/algo/structure/cd_utils/cuSequenceTable.hpp [code] | |
| include/algo/structure/cd_utils/cuSimpleB2SWrapper.hpp [code] | |
| include/algo/structure/cd_utils/cuSort.hpp [code] | |
| include/algo/structure/cd_utils/cuTaxClient.hpp [code] | |
| include/algo/structure/cd_utils/cuTaxNRCriteria.hpp [code] | |
| include/algo/structure/cd_utils/cuTaxTree.hpp [code] | |
| include/algo/structure/cd_utils/cuUtils.hpp [code] | |
| include/algo/structure/cd_utils/tree_msvc7.hpp [code] | |
| include/algo/structure/struct_dp/struct_dp.h [code] | |
| include/algo/structure/struct_util/struct_util.hpp [code] | |
| include/algo/structure/struct_util/su_block_multiple_alignment.hpp [code] | |
| include/algo/structure/struct_util/su_pssm.hpp [code] | |
| include/algo/structure/struct_util/su_sequence_set.hpp [code] | |
| include/algo/structure/threader/thrdatd.h [code] | |
| include/algo/structure/threader/thrddecl.h [code] | |
| include/algo/structure/wx_tools/wx_tools.hpp [code] | |
| include/algo/text/text_util.hpp [code] | |
| include/algo/text/vector.hpp [code] | |
| include/algo/text/vector_impl.hpp [code] | |
| include/algo/text/vector_score.hpp [code] | |
| include/algo/text/vector_serial.hpp [code] | |
| include/algo/tree/tree_algo.hpp [code] | Tree algorithms |
| include/algo/volume_merge/bv_merger.hpp [code] | |
| include/algo/volume_merge/volume_merge.hpp [code] | |
| include/algo/winmask/seq_masker.hpp [code] | |
| include/algo/winmask/seq_masker_cache_boost.hpp [code] | |
| include/algo/winmask/seq_masker_istat.hpp [code] | |
| include/algo/winmask/seq_masker_istat_ascii.hpp [code] | |
| include/algo/winmask/seq_masker_istat_bin.hpp [code] | |
| include/algo/winmask/seq_masker_istat_factory.hpp [code] | |
| include/algo/winmask/seq_masker_istat_oascii.hpp [code] | |
| include/algo/winmask/seq_masker_istat_obinary.hpp [code] | |
| include/algo/winmask/seq_masker_ostat.hpp [code] | |
| include/algo/winmask/seq_masker_ostat_ascii.hpp [code] | |
| include/algo/winmask/seq_masker_ostat_bin.hpp [code] | |
| include/algo/winmask/seq_masker_ostat_factory.hpp [code] | |
| include/algo/winmask/seq_masker_ostat_opt.hpp [code] | |
| include/algo/winmask/seq_masker_ostat_opt_ascii.hpp [code] | |
| include/algo/winmask/seq_masker_ostat_opt_bin.hpp [code] | |
| include/algo/winmask/seq_masker_score.hpp [code] | |
| include/algo/winmask/seq_masker_score_mean.hpp [code] | |
| include/algo/winmask/seq_masker_score_mean_glob.hpp [code] | |
| include/algo/winmask/seq_masker_score_min.hpp [code] | |
| include/algo/winmask/seq_masker_uset_array.hpp [code] | |
| include/algo/winmask/seq_masker_uset_hash.hpp [code] | |
| include/algo/winmask/seq_masker_uset_simple.hpp [code] | |
| include/algo/winmask/seq_masker_util.hpp [code] | |
| include/algo/winmask/seq_masker_window.hpp [code] | |
| include/algo/winmask/seq_masker_window_ambig.hpp [code] | |
| include/algo/winmask/seq_masker_window_pattern.hpp [code] | |
| include/algo/winmask/seq_masker_window_pattern_ambig.hpp [code] | |
| include/bdb/bdb_blob.hpp [code] | |
| include/bdb/bdb_blobcache.hpp [code] | |
| include/bdb/bdb_bv_property_store.hpp [code] | |
| include/bdb/bdb_bv_split_store.hpp [code] | |
| include/bdb/bdb_bv_store.hpp [code] | |
| include/bdb/bdb_checkpoint_thread.hpp [code] | |
| include/bdb/bdb_cursor.hpp [code] | |
| include/bdb/bdb_dict_store.hpp [code] | |
| include/bdb/bdb_env.hpp [code] | |
| include/bdb/bdb_expt.hpp [code] | |
| include/bdb/bdb_ext_blob.hpp [code] | |
| include/bdb/bdb_file.hpp [code] | |
| include/bdb/bdb_filedump.hpp [code] | |
| include/bdb/bdb_map.hpp [code] | |
| include/bdb/bdb_merge.hpp [code] | |
| include/bdb/bdb_query.hpp [code] | |
| include/bdb/bdb_query_parser.hpp [code] | |
| include/bdb/bdb_range_map.hpp [code] | |
| include/bdb/bdb_result_store.hpp [code] | |
| include/bdb/bdb_split_blob.hpp [code] | |
| include/bdb/bdb_split_cursor.hpp [code] | |
| include/bdb/bdb_trans.hpp [code] | |
| include/bdb/bdb_types.hpp [code] | |
| include/bdb/bdb_util.hpp [code] | |
| include/bdb/bdb_volumes.hpp [code] | |
| include/build-system/project_tree_builder/Configuration.hpp [code] | User-defined methods of the data storage class |
| include/build-system/project_tree_builder/Configuration_.hpp [code] | Data storage class |
| include/build-system/project_tree_builder/Configurations.hpp [code] | User-defined methods of the data storage class |
| include/build-system/project_tree_builder/Configurations_.hpp [code] | Data storage class |
| include/build-system/project_tree_builder/File.hpp [code] | User-defined methods of the data storage class |
| include/build-system/project_tree_builder/File_.hpp [code] | Data storage class |
| include/build-system/project_tree_builder/FileConfiguration.hpp [code] | User-defined methods of the data storage class |
| include/build-system/project_tree_builder/FileConfiguration_.hpp [code] | Data storage class |
| include/build-system/project_tree_builder/Files.hpp [code] | User-defined methods of the data storage class |
| include/build-system/project_tree_builder/Files_.hpp [code] | Data storage class |
| include/build-system/project_tree_builder/Filter.hpp [code] | User-defined methods of the data storage class |
| include/build-system/project_tree_builder/Filter_.hpp [code] | Data storage class |
| include/build-system/project_tree_builder/msvc71_project__.hpp [code] | |
| include/build-system/project_tree_builder/msvc71_project_doxygen.h [code] | |
| include/build-system/project_tree_builder/msvc71_project_module.hpp [code] | |
| include/build-system/project_tree_builder/Platform.hpp [code] | User-defined methods of the data storage class |
| include/build-system/project_tree_builder/Platform_.hpp [code] | Data storage class |
| include/build-system/project_tree_builder/Platforms.hpp [code] | User-defined methods of the data storage class |
| include/build-system/project_tree_builder/Platforms_.hpp [code] | Data storage class |
| include/build-system/project_tree_builder/Tool.hpp [code] | User-defined methods of the data storage class |
| include/build-system/project_tree_builder/Tool_.hpp [code] | Data storage class |
| include/build-system/project_tree_builder/VisualStudioProject.hpp [code] | User-defined methods of the data storage class |
| include/build-system/project_tree_builder/VisualStudioProject_.hpp [code] | Data storage class |
| include/cgi/caf.hpp [code] | |
| include/cgi/cgi_exception.hpp [code] | Exception classes used by the NCBI CGI framework |
| include/cgi/cgi_serial.hpp [code] | |
| include/cgi/cgi_session.hpp [code] | API to store CGI session data between Web requests |
| include/cgi/cgi_util.hpp [code] | |
| include/cgi/cgiapp.hpp [code] | |
| include/cgi/cgiapp_cached.hpp [code] | |
| include/cgi/cgictx.hpp [code] | |
| include/cgi/error_codes.hpp [code] | |
| include/cgi/ncbicgi.hpp [code] | |
| include/cgi/ncbicgir.hpp [code] | |
| include/cgi/ncbires.hpp [code] | |
| include/cgi/ref_args.hpp [code] | |
| include/cgi/impl/cgi_entry_reader.hpp [code] | Support classes for on-demand CGI input parsing |
| include/common/header_template.hpp [code] | Brief description of file: this should be a single sentence ending in a period |
| include/common/metamodules_doxygen.h [code] | |
| include/common/ncbi_export.h [code] | Defines to provide correct exporting from DLLs in some configurations |
| include/common/ncbi_package_ver.h [code] | |
| include/common/ncbi_pch_impl.hpp [code] | Header file to be pre-compiled and speed up build of NCBI C++ Toolkit |
| include/common/ncbi_source_ver.h [code] | |
| include/common/ncbiconf_impl.h [code] | Configuration macros |
| include/common/test_assert.h [code] | |
| include/common/test_assert_impl.h [code] | |
| include/common/config/ncbiconf_msvc.h [code] | |
| include/common/config/ncbiconf_msvc_site.h [code] | |
| include/common/config/ncbiconf_universal.h [code] | Architecture-specific settings for universal builds |
| include/common/config/ncbiconf_xcode.h [code] | |
| include/common/config/ncbiconf_xcode_site.h [code] | |
| include/connect/connect_export.h [code] | |
| include/connect/email_diag_handler.hpp [code] | |
| include/connect/error_codes.hpp [code] | |
| include/connect/ncbi_buffer.h [code] | |
| include/connect/ncbi_conn_exception.hpp [code] | |
| include/connect/ncbi_conn_reader_writer.hpp [code] | |
| include/connect/ncbi_conn_stream.hpp [code] | |
| include/connect/ncbi_connection.h [code] | |
| include/connect/ncbi_connector.h [code] | |
| include/connect/ncbi_connutil.h [code] | |
| include/connect/ncbi_core.h [code] | |
| include/connect/ncbi_core_cxx.hpp [code] | |
| include/connect/ncbi_file_connector.h [code] | |
| include/connect/ncbi_ftp_connector.h [code] | |
| include/connect/ncbi_gnutls.h [code] | |
| include/connect/ncbi_heapmgr.h [code] | |
| include/connect/ncbi_host_info.h [code] | |
| include/connect/ncbi_http_connector.h [code] | |
| include/connect/ncbi_memory_connector.h [code] | |
| include/connect/ncbi_namedpipe.hpp [code] | Portable interprocess named pipe API for: UNIX, MS-Win |
| include/connect/ncbi_namedpipe_connector.hpp [code] | Implement CONNECTOR for a named pipe interprocess communication (based on the NCBI CNamedPipe) |
| include/connect/ncbi_pipe.hpp [code] | Portable class for work with process pipes |
| include/connect/ncbi_pipe_connector.hpp [code] | Implement CONNECTOR for a pipe interprocess communication (based on the NCBI CPipe) |
| include/connect/ncbi_sendmail.h [code] | |
| include/connect/ncbi_server_info.h [code] | |
| include/connect/ncbi_service.h [code] | |
| include/connect/ncbi_service_connector.h [code] | |
| include/connect/ncbi_socket.h [code] | |
| include/connect/ncbi_socket.hpp [code] | |
| include/connect/ncbi_socket_connector.h [code] | |
| include/connect/ncbi_socket_unix.h [code] | |
| include/connect/ncbi_socket_unix.hpp [code] | |
| include/connect/ncbi_types.h [code] | |
| include/connect/ncbi_userhost.hpp [code] | |
| include/connect/ncbi_util.h [code] | |
| include/connect/server.hpp [code] | Framework to create multithreaded network servers with thread-per-request scheduling |
| include/connect/server_monitor.hpp [code] | |
| include/connect/threaded_server.hpp [code] | |
| include/connect/services/balancing.hpp [code] | |
| include/connect/services/blob_storage_netcache.hpp [code] | |
| include/connect/services/error_codes.hpp [code] | |
| include/connect/services/grid_client.hpp [code] | NetSchedule Framework specs |
| include/connect/services/grid_client_app.hpp [code] | NetSchedule Framework specs |
| include/connect/services/grid_control_thread.hpp [code] | |
| include/connect/services/grid_debug_context.hpp [code] | |
| include/connect/services/grid_globals.hpp [code] | |
| include/connect/services/grid_rw_impl.hpp [code] | |
| include/connect/services/grid_worker.hpp [code] | Grid Framework specs |
| include/connect/services/grid_worker_app.hpp [code] | NetSchedule worker node application |
| include/connect/services/netcache_admin.hpp [code] | Administrative API for NetCache |
| include/connect/services/netcache_api.hpp [code] | NetCache client specs |
| include/connect/services/netcache_api_expt.hpp [code] | NetCache API exception declarations |
| include/connect/services/netcache_key.hpp [code] | NetCache client specs |
| include/connect/services/neticache_client.hpp [code] | NetCache ICache client specs |
| include/connect/services/netobject.hpp [code] | |
| include/connect/services/netschedule_api.hpp [code] | NetSchedule client specs |
| include/connect/services/netschedule_api_expt.hpp [code] | |
| include/connect/services/netschedule_key.hpp [code] | |
| include/connect/services/netservice_api.hpp [code] | |
| include/connect/services/netservice_api_expt.hpp [code] | |
| include/connect/services/netservice_protocol_parser.hpp [code] | |
| include/connect/services/ns_client_factory.hpp [code] | |
| include/connect/services/ra_dispatcher_client.hpp [code] | |
| include/connect/services/remote_app.hpp [code] | |
| include/connect/services/remote_app_mb.hpp [code] | |
| include/connect/services/remote_app_sb.hpp [code] | |
| include/connect/services/remote_job.hpp [code] | |
| include/connect/services/srv_connections.hpp [code] | |
| include/connect/services/srv_connections_expt.hpp [code] | |
| include/connect/services/util.hpp [code] | |
| include/corelib/blob_storage.hpp [code] | |
| include/corelib/ddumpable.hpp [code] | |
| include/corelib/env_reg.hpp [code] | Classes to support using environment variables as a backend for the registry framework |
| include/corelib/error_codes.hpp [code] | |
| include/corelib/expr.hpp [code] | |
| include/corelib/guard.hpp [code] | |
| include/corelib/hash_map.hpp [code] | |
| include/corelib/hash_set.hpp [code] | |
| include/corelib/interprocess_lock.hpp [code] | Simple inter-process lock |
| include/corelib/metareg.hpp [code] | CMetaRegistry: Singleton class for loading CRegistry data from files; keeps track of what it loaded from where, for potential reuse |
| include/corelib/mswin_export.h [code] | |
| include/corelib/mswin_no_popup.h [code] | |
| include/corelib/ncbi_bswap.hpp [code] | |
| include/corelib/ncbi_config.hpp [code] | Parameters initialization model |
| include/corelib/ncbi_limits.h [code] | |
| include/corelib/ncbi_limits.hpp [code] | |
| include/corelib/ncbi_mask.hpp [code] | Classes to match string against set of masks |
| include/corelib/ncbi_os_mswin.hpp [code] | Defines MS Windows specifics for our "C++" code |
| include/corelib/ncbi_os_unix.hpp [code] | UNIX-specifics |
| include/corelib/ncbi_param.hpp [code] | |
| include/corelib/ncbi_process.hpp [code] | Defines a process management classes |
| include/corelib/ncbi_safe_static.hpp [code] | |
| include/corelib/ncbi_signal.hpp [code] | Setup interrupt signal handling |
| include/corelib/ncbi_stack.hpp [code] | |
| include/corelib/ncbi_strings.h [code] | String constants used in NCBI C/C++ toolkit |
| include/corelib/ncbi_system.hpp [code] | |
| include/corelib/ncbi_tree.hpp [code] | |
| include/corelib/ncbi_xstr.hpp [code] | |
| include/corelib/ncbiapp.hpp [code] | Defines the CNcbiApplication and CAppException classes for creating NCBI applications |
| include/corelib/ncbiargs.hpp [code] | Defines command line argument related classes |
| include/corelib/ncbiatomic.h [code] | Multi-threading -- atomic pointer exchange function |
| include/corelib/ncbiatomic.hpp [code] | Multi-threading -- atomic pointer exchange function |
| include/corelib/ncbicfg.h [code] | Defines access to miscellaneous global configuration settings |
| include/corelib/ncbicntr.hpp [code] | |
| include/corelib/ncbidbg.hpp [code] | NCBI C++ auxiliary debug macros |
| include/corelib/ncbidiag.hpp [code] | Defines NCBI C++ diagnostic APIs, classes, and macros |
| include/corelib/ncbidiag.inl [code] | |
| include/corelib/ncbidll.hpp [code] | Define class Dll and for Portable DLL handling |
| include/corelib/ncbienv.hpp [code] | Defines unified interface to application:
|
| include/corelib/ncbiexec.hpp [code] | Defines a portable execute class |
| include/corelib/ncbiexpt.hpp [code] | Defines NCBI C++ exception handling |
| include/corelib/ncbifile.hpp [code] | Defines classes: CDirEntry, CFile, CDir, CSymLink, CMemoryFile, CFileUtil, CFileLock, CFileIO, CFileReader, CFileWriter, CFileReaderWriter, CFileException |
| include/corelib/ncbifloat.h [code] | Floating-point support routines |
| include/corelib/ncbimempool.hpp [code] | Memory pool for fast allocation of memory for localized set of CObjects, e.g |
| include/corelib/ncbimisc.hpp [code] | |
| include/corelib/ncbimtx.hpp [code] | Multi-threading -- mutexes; rw-locks; semaphore |
| include/corelib/ncbimtx.inl [code] | |
| include/corelib/ncbiobj.hpp [code] | Portable reference counted smart and weak pointers using CWeakRef, CRef, CObject and CObjectEx |
| include/corelib/ncbireg.hpp [code] | Process information in the NCBI Registry, including working with configuration files |
| include/corelib/ncbistd.hpp [code] | Miscellaneous common-use basic types and functionality |
| include/corelib/ncbistl.hpp [code] | The NCBI C++/STL use hints |
| include/corelib/ncbistr.hpp [code] | The NCBI C++ standard methods for dealing with std::string |
| include/corelib/ncbistr_util.hpp [code] | Algorithms for string processing |
| include/corelib/ncbistre.hpp [code] | NCBI C++ stream class wrappers for triggering between "new" and "old" C++ stream libraries |
| include/corelib/ncbithr.hpp [code] | Multi-threading -- classes, functions, and features |
| include/corelib/ncbithr_conf.hpp [code] | Multi-threading configuration |
| include/corelib/ncbitime.hpp [code] | Defines: CTimeFormat - storage class for fime format |
| include/corelib/ncbitype.h [code] | Defines Limits for the types used in NCBI C/C++ toolkit |
| include/corelib/ncbiutil.hpp [code] | Useful/utility classes and methods |
| include/corelib/obj_pool.hpp [code] | |
| include/corelib/obj_store.hpp [code] | |
| include/corelib/plugin_manager.hpp [code] | Plugin manager (using class factory paradigm) |
| include/corelib/plugin_manager_impl.hpp [code] | Helper classes and templates to implement plugins |
| include/corelib/plugin_manager_store.hpp [code] | |
| include/corelib/reader_writer.hpp [code] | |
| include/corelib/request_control.hpp [code] | |
| include/corelib/request_ctx.hpp [code] | Defines CRequestContext class for NCBI C++ diagnostic API |
| include/corelib/request_status.hpp [code] | Defines CRequestStatus class for NCBI C++ diagnostic API |
| include/corelib/resource_info.hpp [code] | Defines NCBI C++ secure resources API |
| include/corelib/rwstream.hpp [code] | |
| include/corelib/stream_utils.hpp [code] | |
| include/corelib/syslog.hpp [code] | Portable system-logging API |
| include/corelib/tempstr.hpp [code] | |
| include/corelib/test_boost.hpp [code] | Utility stuff for more convenient using of Boost.Test library |
| include/corelib/test_mt.hpp [code] | Wrapper for testing modules in MT environment |
| include/corelib/version.hpp [code] | |
| include/corelib/hash_impl/_hash_fun.h [code] | |
| include/corelib/hash_impl/_hash_map.h [code] | |
| include/corelib/hash_impl/_hash_set.h [code] | |
| include/corelib/hash_impl/_hashtable.c [code] | |
| include/corelib/hash_impl/_hashtable.h [code] | |
| include/corelib/hash_impl/_relops_hash_cont.h [code] | |
| include/corelib/hash_impl/stlp_defs.hpp [code] | |
| include/corelib/impl/ncbi_atomic_defs.h [code] | (Highly!) platform-specific configuration for low-level atomic operations (reference-count manipulation, pointer swapping) |
| include/corelib/impl/ncbi_dbsvcmapper.hpp [code] | |
| include/corelib/impl/ncbi_os_mswin.h [code] | Defines some MS Windows specifics for our "C" code |
| include/corelib/impl/ncbi_param_impl.hpp [code] | |
| include/corelib/impl/rwstreambuf.hpp [code] | Reader-writer based stream buffer |
| include/ctools/asn_connection.h [code] | |
| include/ctools/asn_converter.hpp [code] | |
| include/ctools/ctools.h [code] | |
| include/ctools/ctools.hpp [code] | |
| include/ctools/asn/asnio.hpp [code] | |
| include/ctools/asn/asnwrite.hpp [code] | |
| include/db/error_codes.hpp [code] | |
| include/db/bdb/bdb_blob.hpp [code] | |
| include/db/bdb/bdb_blobcache.hpp [code] | |
| include/db/bdb/bdb_bv_property_store.hpp [code] | |
| include/db/bdb/bdb_bv_split_store.hpp [code] | |
| include/db/bdb/bdb_bv_store.hpp [code] | |
| include/db/bdb/bdb_checkpoint_thread.hpp [code] | |
| include/db/bdb/bdb_cursor.hpp [code] | |
| include/db/bdb/bdb_dict_store.hpp [code] | |
| include/db/bdb/bdb_env.hpp [code] | |
| include/db/bdb/bdb_expt.hpp [code] | |
| include/db/bdb/bdb_ext_blob.hpp [code] | |
| include/db/bdb/bdb_file.hpp [code] | |
| include/db/bdb/bdb_filedump.hpp [code] | |
| include/db/bdb/bdb_map.hpp [code] | |
| include/db/bdb/bdb_merge.hpp [code] | |
| include/db/bdb/bdb_query.hpp [code] | |
| include/db/bdb/bdb_query_parser.hpp [code] | |
| include/db/bdb/bdb_range_map.hpp [code] | |
| include/db/bdb/bdb_result_store.hpp [code] | |
| include/db/bdb/bdb_split_blob.hpp [code] | |
| include/db/bdb/bdb_split_cursor.hpp [code] | |
| include/db/bdb/bdb_trans.hpp [code] | |
| include/db/bdb/bdb_types.hpp [code] | |
| include/db/bdb/bdb_util.hpp [code] | |
| include/db/bdb/bdb_volumes.hpp [code] | |
| include/db/sqlite/sqlitewrapp.hpp [code] | |
| include/dbapi/dbapi.hpp [code] | Defines the database API innterfaces for a variety of DBMS |
| include/dbapi/dbapi_variant_convert.hpp [code] | |
| include/dbapi/driver_mgr.hpp [code] | |
| include/dbapi/error_codes.hpp [code] | |
| include/dbapi/variant.hpp [code] | |
| include/dbapi/cache/dbapi_blob_cache.hpp [code] | |
| include/dbapi/driver/dbapi_conn_factory.hpp [code] | |
| include/dbapi/driver/dbapi_driver_conn_mgr.hpp [code] | |
| include/dbapi/driver/dbapi_driver_conn_params.hpp [code] | |
| include/dbapi/driver/dbapi_driver_convert.hpp [code] | |
| include/dbapi/driver/dbapi_object_convert.hpp [code] | |
| include/dbapi/driver/dbapi_svc_mapper.hpp [code] | |
| include/dbapi/driver/driver_mgr.hpp [code] | |
| include/dbapi/driver/drivers.hpp [code] | |
| include/dbapi/driver/exception.hpp [code] | |
| include/dbapi/driver/interfaces.hpp [code] | |
| include/dbapi/driver/public.hpp [code] | |
| include/dbapi/driver/types.hpp [code] | |
| include/dbapi/driver/ctlib/interfaces.hpp [code] | |
| include/dbapi/driver/ctlib/ncbi_dbapi_rename_ctlib.h [code] | |
| include/dbapi/driver/dblib/interfaces.hpp [code] | |
| include/dbapi/driver/dblib/interfaces_p.hpp [code] | |
| include/dbapi/driver/ftds64/interfaces.hpp [code] | |
| include/dbapi/driver/ftds64/ncbi_ftds_rename_sybdb_ver64.h [code] | |
| include/dbapi/driver/ftds64/freetds/bkpublic.h [code] | |
| include/dbapi/driver/ftds64/freetds/config.h [code] | |
| include/dbapi/driver/ftds64/freetds/cspublic.h [code] | |
| include/dbapi/driver/ftds64/freetds/cstypes.h [code] | |
| include/dbapi/driver/ftds64/freetds/ctlib.h [code] | |
| include/dbapi/driver/ftds64/freetds/ctpublic.h [code] | |
| include/dbapi/driver/ftds64/freetds/dblib.h [code] | |
| include/dbapi/driver/ftds64/freetds/des.h [code] | |
| include/dbapi/driver/ftds64/freetds/freetds_sysconfdir.h [code] | |
| include/dbapi/driver/ftds64/freetds/hmac_md5.h [code] | |
| include/dbapi/driver/ftds64/freetds/md4.h [code] | |
| include/dbapi/driver/ftds64/freetds/md5.h [code] | |
| include/dbapi/driver/ftds64/freetds/rename_freetds64.h [code] | |
| include/dbapi/driver/ftds64/freetds/replacements.h [code] | |
| include/dbapi/driver/ftds64/freetds/sqldb.h [code] | |
| include/dbapi/driver/ftds64/freetds/sybdb.h [code] | Primary include file for db-lib applications |
| include/dbapi/driver/ftds64/freetds/syberror.h [code] | |
| include/dbapi/driver/ftds64/freetds/sybfront.h [code] | |
| include/dbapi/driver/ftds64/freetds/tds.h [code] | Main include file for libtds |
| include/dbapi/driver/ftds64/freetds/tds_configs.h [code] | |
| include/dbapi/driver/ftds64/freetds/tds_sysdep_private.h [code] | |
| include/dbapi/driver/ftds64/freetds/tds_sysdep_public.h [code] | |
| include/dbapi/driver/ftds64/freetds/tdsbytes.h [code] | |
| include/dbapi/driver/ftds64/freetds/tdsconvert.h [code] | |
| include/dbapi/driver/ftds64/freetds/tdsiconv.h [code] | |
| include/dbapi/driver/ftds64/freetds/tdsodbc.h [code] | |
| include/dbapi/driver/ftds64/freetds/tdssrv.h [code] | |
| include/dbapi/driver/ftds64/freetds/tdsstring.h [code] | |
| include/dbapi/driver/ftds64/freetds/tdsthread.h [code] | |
| include/dbapi/driver/ftds64/freetds/tdsver.h [code] | |
| include/dbapi/driver/ftds64/freetds/replacements/readpassphrase.h [code] | |
| include/dbapi/driver/impl/dbapi_driver_utils.hpp [code] | |
| include/dbapi/driver/impl/dbapi_impl_cmd.hpp [code] | |
| include/dbapi/driver/impl/dbapi_impl_connection.hpp [code] | |
| include/dbapi/driver/impl/dbapi_impl_context.hpp [code] | |
| include/dbapi/driver/impl/dbapi_impl_result.hpp [code] | |
| include/dbapi/driver/impl/handle_stack.hpp [code] | |
| include/dbapi/driver/mysql/interfaces.hpp [code] | |
| include/dbapi/driver/odbc/interfaces.hpp [code] | |
| include/dbapi/driver/odbc/unix_odbc/odbcinst.h [code] | |
| include/dbapi/driver/odbc/unix_odbc/sql.h [code] | |
| include/dbapi/driver/odbc/unix_odbc/sqlext.h [code] | |
| include/dbapi/driver/odbc/unix_odbc/sqlfront.h [code] | |
| include/dbapi/driver/odbc/unix_odbc/sqltypes.h [code] | |
| include/dbapi/driver/odbc/unix_odbc/sqlucode.h [code] | |
| include/dbapi/driver/util/blobstore.hpp [code] | |
| include/dbapi/driver/util/numeric_convert.hpp [code] | |
| include/dbapi/driver/util/parameters.hpp [code] | |
| include/dbapi/driver/util/pointer_pot.hpp [code] | |
| include/gui/fltk.hpp [code] | |
| include/gui/gui.hpp [code] | |
| include/gui/gui_export.h [code] | Defines to provide correct exporting from DLLs in Windows |
| include/gui/opengl.h [code] | Standard mechanism to include OpenGL headers for all platforms |
| include/gui/types.hpp [code] | |
| include/gui/cache/sqlite_cache.hpp [code] | |
| include/gui/config/feat_config_inherited.hpp [code] | |
| include/gui/config/feat_show.hpp [code] | |
| include/gui/config/settings_set.hpp [code] | |
| include/gui/config/theme_set.hpp [code] | |
| include/gui/core/algo_factory.hpp [code] | |
| include/gui/core/algo_plugin.hpp [code] | |
| include/gui/core/data_factory.hpp [code] | |
| include/gui/core/data_plugin.hpp [code] | |
| include/gui/core/data_store.hpp [code] | |
| include/gui/core/dh_manager.hpp [code] | |
| include/gui/core/doc_exception.hpp [code] | |
| include/gui/core/docmgr_view.hpp [code] | |
| include/gui/core/document.hpp [code] | |
| include/gui/core/igbproject.hpp [code] | |
| include/gui/core/iselection_service.hpp [code] | |
| include/gui/core/iservice.hpp [code] | |
| include/gui/core/iview.hpp [code] | |
| include/gui/core/iview_composite.hpp [code] | |
| include/gui/core/obj_delete.hpp [code] | |
| include/gui/core/obj_edit.hpp [code] | |
| include/gui/core/plugin.hpp [code] | |
| include/gui/core/plugin_arg_dialog.hpp [code] | |
| include/gui/core/plugin_arg_dialog_.hpp [code] | |
| include/gui/core/plugin_arg_form.hpp [code] | |
| include/gui/core/plugin_dlg.hpp [code] | |
| include/gui/core/plugin_dlg_.hpp [code] | |
| include/gui/core/plugin_factory.hpp [code] | |
| include/gui/core/plugin_handle.hpp [code] | |
| include/gui/core/plugin_registry.hpp [code] | |
| include/gui/core/plugin_thread.hpp [code] | |
| include/gui/core/plugin_utils.hpp [code] | |
| include/gui/core/project_manager.hpp [code] | |
| include/gui/core/resolver.hpp [code] | |
| include/gui/core/task_manager.hpp [code] | |
| include/gui/core/task_queue.hpp [code] | |
| include/gui/core/version.hpp [code] | |
| include/gui/core/view.hpp [code] | |
| include/gui/core/view_base.hpp [code] | |
| include/gui/core/view_composite.hpp [code] | |
| include/gui/core/view_composite_plugin.hpp [code] | |
| include/gui/core/view_container.hpp [code] | |
| include/gui/core/view_exception.hpp [code] | |
| include/gui/core/view_extensions.hpp [code] | |
| include/gui/core/view_factory.hpp [code] | |
| include/gui/core/view_link.hpp [code] | |
| include/gui/core/view_plugin.hpp [code] | |
| include/gui/dialogs/edit/seq_feat_remove_dlg.hpp [code] | |
| include/gui/dialogs/edit/seq_feat_remove_dlg_.hpp [code] | |
| include/gui/dialogs/entry_form/entry_form.hpp [code] | |
| include/gui/dialogs/entry_form/entry_form_.hpp [code] | |
| include/gui/dialogs/entry_form/field_assoc.hpp [code] | |
| include/gui/dialogs/registry/registry.hpp [code] | |
| include/gui/dialogs/registry/registry_.hpp [code] | |
| include/gui/dialogs/registry/registry_data.hpp [code] | |
| include/gui/dialogs/registry/registry_file.hpp [code] | |
| include/gui/dialogs/seq_goto/seq_goto_dlg.hpp [code] | |
| include/gui/dialogs/seq_goto/seq_goto_dlg_.hpp [code] | |
| include/gui/graph/axis.hpp [code] | |
| include/gui/graph/combo_chart.hpp [code] | |
| include/gui/graph/graph_panel.hpp [code] | |
| include/gui/graph/igraph.hpp [code] | |
| include/gui/graph/igraph_data.hpp [code] | |
| include/gui/graph/igraph_utils.hpp [code] | |
| include/gui/graph/legend.hpp [code] | |
| include/gui/graph/pie_graph.hpp [code] | |
| include/gui/graph/regular_grid.hpp [code] | |
| include/gui/graph/scatter_graph.hpp [code] | |
| include/gui/math/bbox.hpp [code] | |
| include/gui/math/curve.hpp [code] | |
| include/gui/math/curve_bezier.hpp [code] | |
| include/gui/math/curve_cubic.hpp [code] | |
| include/gui/math/globals.hpp [code] | |
| include/gui/math/intersect.hpp [code] | |
| include/gui/math/math.hpp [code] | |
| include/gui/math/matrix3.hpp [code] | |
| include/gui/math/matrix4.hpp [code] | |
| include/gui/math/promote.hpp [code] | |
| include/gui/math/quat.hpp [code] | |
| include/gui/math/vect2.hpp [code] | |
| include/gui/math/vect3.hpp [code] | |
| include/gui/math/vect4.hpp [code] | |
| include/gui/objects/AbstractProjectItem.hpp [code] | |
| include/gui/objects/AbstractProjectItem_.hpp [code] | Data storage class |
| include/gui/objects/DataHandle.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/DataHandle_.hpp [code] | Data storage class |
| include/gui/objects/DataHandleAction.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/DataHandleAction_.hpp [code] | Data storage class |
| include/gui/objects/DataHandleSelector.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/DataHandleSelector_.hpp [code] | Data storage class |
| include/gui/objects/DataHandleTransformer.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/DataHandleTransformer_.hpp [code] | Data storage class |
| include/gui/objects/DataHandleViewer.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/DataHandleViewer_.hpp [code] | Data storage class |
| include/gui/objects/FolderInfo.hpp [code] | |
| include/gui/objects/FolderInfo_.hpp [code] | Data storage class |
| include/gui/objects/gbench_svc_cli.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/gbench_svc_cli_.hpp [code] | Data storage class |
| include/gui/objects/GBenchFeedbackRequest.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/GBenchFeedbackRequest_.hpp [code] | Data storage class |
| include/gui/objects/GBenchInitReply.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/GBenchInitReply_.hpp [code] | Data storage class |
| include/gui/objects/GBenchInitRequest.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/GBenchInitRequest_.hpp [code] | Data storage class |
| include/gui/objects/GBenchServiceReply.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/GBenchServiceReply_.hpp [code] | Data storage class |
| include/gui/objects/GBenchServiceRequest.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/GBenchServiceRequest_.hpp [code] | Data storage class |
| include/gui/objects/GBenchToolResults.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/GBenchToolResults_.hpp [code] | Data storage class |
| include/gui/objects/GBenchVersionInfo.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/GBenchVersionInfo_.hpp [code] | Data storage class |
| include/gui/objects/GBenchVersionReply.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/GBenchVersionReply_.hpp [code] | Data storage class |
| include/gui/objects/GBenchVersionRequest.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/GBenchVersionRequest_.hpp [code] | Data storage class |
| include/gui/objects/GBProject.hpp [code] | |
| include/gui/objects/GBProject_.hpp [code] | Data storage class |
| include/gui/objects/GBProject_ver2.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/GBProject_ver2_.hpp [code] | Data storage class |
| include/gui/objects/GBProjectHandle.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/GBProjectHandle_.hpp [code] | Data storage class |
| include/gui/objects/GBWorkspace.hpp [code] | |
| include/gui/objects/GBWorkspace_.hpp [code] | Data storage class |
| include/gui/objects/gui_objects__.hpp [code] | |
| include/gui/objects/gui_objects_doxygen.h [code] | |
| include/gui/objects/igbproject.hpp [code] | |
| include/gui/objects/MessageHistoryInfo.hpp [code] | |
| include/gui/objects/MessageHistoryInfo_.hpp [code] | Data storage class |
| include/gui/objects/MessageStatus.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/MessageStatus_.hpp [code] | Data storage class |
| include/gui/objects/MRUCache.hpp [code] | |
| include/gui/objects/MRUCache_.hpp [code] | Data storage class |
| include/gui/objects/NCBI_Data_Handle_module.hpp [code] | |
| include/gui/objects/NCBI_GBenchService_module.hpp [code] | |
| include/gui/objects/NCBI_GUI_Project_module.hpp [code] | |
| include/gui/objects/NCBI_Plugin_module.hpp [code] | |
| include/gui/objects/OS_Ver.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/OS_Ver_.hpp [code] | Data storage class |
| include/gui/objects/plugin.hpp [code] | |
| include/gui/objects/plugin_exception.hpp [code] | |
| include/gui/objects/PluginArg.hpp [code] | |
| include/gui/objects/PluginArg_.hpp [code] | Data storage class |
| include/gui/objects/PluginArgSet.hpp [code] | |
| include/gui/objects/PluginArgSet_.hpp [code] | Data storage class |
| include/gui/objects/PluginCache.hpp [code] | |
| include/gui/objects/PluginCache_.hpp [code] | Data storage class |
| include/gui/objects/PluginCommand.hpp [code] | |
| include/gui/objects/PluginCommand_.hpp [code] | Data storage class |
| include/gui/objects/PluginIconInfo.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/PluginIconInfo_.hpp [code] | Data storage class |
| include/gui/objects/PluginInfo.hpp [code] | |
| include/gui/objects/PluginInfo_.hpp [code] | Data storage class |
| include/gui/objects/PluginInfoSet.hpp [code] | |
| include/gui/objects/PluginInfoSet_.hpp [code] | Data storage class |
| include/gui/objects/PluginLibInfo.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/PluginLibInfo_.hpp [code] | Data storage class |
| include/gui/objects/PluginMessage.hpp [code] | |
| include/gui/objects/PluginMessage_.hpp [code] | Data storage class |
| include/gui/objects/PluginMessageChain.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/PluginMessageChain_.hpp [code] | Data storage class |
| include/gui/objects/PluginMRUEntry.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/PluginMRUEntry_.hpp [code] | Data storage class |
| include/gui/objects/PluginObject.hpp [code] | |
| include/gui/objects/PluginObject_.hpp [code] | Data storage class |
| include/gui/objects/PluginReply.hpp [code] | |
| include/gui/objects/PluginReply_.hpp [code] | Data storage class |
| include/gui/objects/PluginReplyAction.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/PluginReplyAction_.hpp [code] | Data storage class |
| include/gui/objects/PluginRequest.hpp [code] | |
| include/gui/objects/PluginRequest_.hpp [code] | Data storage class |
| include/gui/objects/PluginUserType.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/PluginUserType_.hpp [code] | Data storage class |
| include/gui/objects/PluginValue.hpp [code] | |
| include/gui/objects/PluginValue_.hpp [code] | Data storage class |
| include/gui/objects/PluginValueConstraint.hpp [code] | |
| include/gui/objects/PluginValueConstraint_.hpp [code] | Data storage class |
| include/gui/objects/PluginValueRangeConstraint.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/PluginValueRangeConstraint_.hpp [code] | Data storage class |
| include/gui/objects/ProjectAnnot.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/ProjectAnnot_.hpp [code] | Data storage class |
| include/gui/objects/ProjectDescr.hpp [code] | |
| include/gui/objects/ProjectDescr_.hpp [code] | Data storage class |
| include/gui/objects/ProjectFolder.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/ProjectFolder_.hpp [code] | Data storage class |
| include/gui/objects/ProjectHistoryItem.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/ProjectHistoryItem_.hpp [code] | Data storage class |
| include/gui/objects/ProjectItem.hpp [code] | |
| include/gui/objects/ProjectItem_.hpp [code] | Data storage class |
| include/gui/objects/ViewDataLink.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/ViewDataLink_.hpp [code] | Data storage class |
| include/gui/objects/ViewDesc.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/ViewDesc_.hpp [code] | Data storage class |
| include/gui/objects/ViewDescriptor.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/ViewDescriptor_.hpp [code] | Data storage class |
| include/gui/objects/ViewMemento.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/ViewMemento_.hpp [code] | Data storage class |
| include/gui/objects/WorkspaceFolder.hpp [code] | User-defined methods of the data storage class |
| include/gui/objects/WorkspaceFolder_.hpp [code] | Data storage class |
| include/gui/objutils/alignment.hpp [code] | |
| include/gui/objutils/alignment_smear.hpp [code] | |
| include/gui/objutils/alignment_smear_layout.hpp [code] | |
| include/gui/objutils/alngraphic_ds.hpp [code] | |
| include/gui/objutils/alnvec_graphic_ds.hpp [code] | |
| include/gui/objutils/bookmark.hpp [code] | |
| include/gui/objutils/comment.hpp [code] | |
| include/gui/objutils/density_map.hpp [code] | |
| include/gui/objutils/edit_event.hpp [code] | |
| include/gui/objutils/entrez_cache.hpp [code] | |
| include/gui/objutils/entrez_conversion.hpp [code] | |
| include/gui/objutils/feat_label.hpp [code] | |
| include/gui/objutils/feat_pack.hpp [code] | |
| include/gui/objutils/feature.hpp [code] | |
| include/gui/objutils/feature_conf_params.hpp [code] | |
| include/gui/objutils/filter.hpp [code] | |
| include/gui/objutils/gi_cache.hpp [code] | |
| include/gui/objutils/graph.hpp [code] | |
| include/gui/objutils/histogram.hpp [code] | |
| include/gui/objutils/histogram_conf.hpp [code] | |
| include/gui/objutils/label.hpp [code] | |
| include/gui/objutils/layout.hpp [code] | |
| include/gui/objutils/layout_gwas.hpp [code] | |
| include/gui/objutils/mate_pair.hpp [code] | |
| include/gui/objutils/obj_clipboard.hpp [code] | |
| include/gui/objutils/obj_convert.hpp [code] | |
| include/gui/objutils/obj_event.hpp [code] | |
| include/gui/objutils/obj_fingerprint.hpp [code] | |
| include/gui/objutils/obj_member_selector.hpp [code] | |
| include/gui/objutils/object_factory.hpp [code] | |
| include/gui/objutils/object_index.hpp [code] | |
| include/gui/objutils/object_manager_engine.hpp [code] | |
| include/gui/objutils/objects.hpp [code] | |
| include/gui/objutils/objects_interface.hpp [code] | |
| include/gui/objutils/pw_alignment.hpp [code] | |
| include/gui/objutils/reg_file.hpp [code] | |
| include/gui/objutils/reg_settings.hpp [code] | |
| include/gui/objutils/registry.hpp [code] | |
| include/gui/objutils/relation.hpp [code] | |
| include/gui/objutils/seq_map.hpp [code] | |
| include/gui/objutils/seqfetch_queue.hpp [code] | |
| include/gui/objutils/seqid_dictionary.hpp [code] | |
| include/gui/objutils/sequence.hpp [code] | |
| include/gui/objutils/snp_bitfield.hpp [code] | |
| include/gui/objutils/snp_utils.hpp [code] | |
| include/gui/objutils/sparsealn_graphic_ds.hpp [code] | |
| include/gui/objutils/switch_points.hpp [code] | |
| include/gui/objutils/ui_tool.hpp [code] | |
| include/gui/objutils/ui_tool_registry.hpp [code] | |
| include/gui/objutils/undo_manager.hpp [code] | |
| include/gui/objutils/undo_manager_interface.hpp [code] | |
| include/gui/objutils/user_type.hpp [code] | |
| include/gui/objutils/utils.hpp [code] | |
| include/gui/objutils/vis_range.hpp [code] | |
| include/gui/objutils/vis_range_event.hpp [code] | |
| include/gui/opengl/geometry.hpp [code] | |
| include/gui/opengl/glarcball.hpp [code] | |
| include/gui/opengl/glbackground.hpp [code] | |
| include/gui/opengl/glbitmapfont.hpp [code] | |
| include/gui/opengl/glcamera.hpp [code] | |
| include/gui/opengl/glcolortable.hpp [code] | |
| include/gui/opengl/glcontainer.hpp [code] | |
| include/gui/opengl/glcurve.hpp [code] | |
| include/gui/opengl/gldlist.hpp [code] | |
| include/gui/opengl/gldrawscale.hpp [code] | |
| include/gui/opengl/glevent.hpp [code] | |
| include/gui/opengl/glexception.hpp [code] | |
| include/gui/opengl/glfont.hpp [code] | |
| include/gui/opengl/glfontutils.hpp [code] | |
| include/gui/opengl/glhelpers.hpp [code] | |
| include/gui/opengl/gllight.hpp [code] | |
| include/gui/opengl/glmaterial.hpp [code] | |
| include/gui/opengl/glpane.hpp [code] | |
| include/gui/opengl/glpoint.hpp [code] | |
| include/gui/opengl/glprint.hpp [code] | |
| include/gui/opengl/glrect.hpp [code] | |
| include/gui/opengl/gltexmanager.hpp [code] | |
| include/gui/opengl/gltexture.hpp [code] | |
| include/gui/opengl/gltube.hpp [code] | |
| include/gui/opengl/gltypes.hpp [code] | |
| include/gui/opengl/glutils.hpp [code] | |
| include/gui/opengl/glviewport.hpp [code] | |
| include/gui/opengl/glwidget.hpp [code] | |
| include/gui/opengl/glzoomlens.hpp [code] | |
| include/gui/opengl/opengl_print_buffer.hpp [code] | |
| include/gui/opengl/rasterizer.hpp [code] | |
| include/gui/opengl/mesa/glcgi_image.hpp [code] | |
| include/gui/opengl/mesa/gloscontext.hpp [code] | |
| include/gui/print/output.hpp [code] | |
| include/gui/print/pdf.hpp [code] | |
| include/gui/print/postscript.hpp [code] | |
| include/gui/print/print.hpp [code] | |
| include/gui/print/print_buffer.hpp [code] | |
| include/gui/print/print_context.hpp [code] | |
| include/gui/print/print_dlg.hpp [code] | |
| include/gui/print/print_dlg_.hpp [code] | |
| include/gui/print/print_media.hpp [code] | |
| include/gui/print/print_options.hpp [code] | |
| include/gui/print/print_utils.hpp [code] | |
| include/gui/print/save_image_dlg.hpp [code] | |
| include/gui/print/save_image_dlg_.hpp [code] | |
| include/gui/print/vector_buffer.hpp [code] | |
| include/gui/print/vector_object.hpp [code] | |
| include/gui/print/vector_output.hpp [code] | |
| include/gui/print/vector_printer.hpp [code] | |
| include/gui/services/add_items_dlg.hpp [code] | |
| include/gui/services/add_items_dlg_.hpp [code] | |
| include/gui/services/component_search_tool.hpp [code] | |
| include/gui/services/context_command.hpp [code] | |
| include/gui/services/context_command_service.hpp [code] | |
| include/gui/services/data_mining_context.hpp [code] | |
| include/gui/services/data_mining_service.hpp [code] | |
| include/gui/services/data_mining_view.hpp [code] | |
| include/gui/services/diag_console_view.hpp [code] | |
| include/gui/services/dm_search_tool.hpp [code] | |
| include/gui/services/entrez_project_utils.hpp [code] | |
| include/gui/services/entrez_search_tool.hpp [code] | |
| include/gui/services/feature_search_tool.hpp [code] | |
| include/gui/services/home_page_service.hpp [code] | |
| include/gui/services/home_page_view.hpp [code] | |
| include/gui/services/pluggable_operation.hpp [code] | |
| include/gui/services/search_form_base.hpp [code] | |
| include/gui/services/search_tool_base.hpp [code] | |
| include/gui/services/selection_service.hpp [code] | |
| include/gui/services/selection_view.hpp [code] | |
| include/gui/services/seqloc_search_context.hpp [code] | |
| include/gui/services/sequence_search_tool.hpp [code] | |
| include/gui/services/service_impl.hpp [code] | |
| include/gui/services/system_view.hpp [code] | |
| include/gui/services/tool_monitor_view.hpp [code] | |
| include/gui/utils/accel_table.hpp [code] | |
| include/gui/utils/app_job.hpp [code] | |
| include/gui/utils/app_job_dispatcher.hpp [code] | |
| include/gui/utils/app_job_engine.hpp [code] | |
| include/gui/utils/app_job_impl.hpp [code] | |
| include/gui/utils/app_popup.hpp [code] | |
| include/gui/utils/attr_range_coll.hpp [code] | |
| include/gui/utils/bbox.hpp [code] | |
| include/gui/utils/browser_utils.hpp [code] | |
| include/gui/utils/button.hpp [code] | |
| include/gui/utils/clipboard.hpp [code] | |
| include/gui/utils/color_dialog.hpp [code] | |
| include/gui/utils/command.hpp [code] | GUI command routing and handling framework |
| include/gui/utils/curve.hpp [code] | |
| include/gui/utils/curve_bezier.hpp [code] | |
| include/gui/utils/curve_cubic.hpp [code] | |
| include/gui/utils/ddx_ddv.hpp [code] | |
| include/gui/utils/diag_handler.hpp [code] | |
| include/gui/utils/dialog.hpp [code] | |
| include/gui/utils/event.hpp [code] | |
| include/gui/utils/event_handler.hpp [code] | |
| include/gui/utils/event_translator.hpp [code] | |
| include/gui/utils/exec.hpp [code] | |
| include/gui/utils/extension.hpp [code] | |
| include/gui/utils/extension_impl.hpp [code] | |
| include/gui/utils/fetch_url.hpp [code] | |
| include/gui/utils/file_browser.hpp [code] | |
| include/gui/utils/fltk_utils.hpp [code] | |
| include/gui/utils/function.hpp [code] | |
| include/gui/utils/globals.hpp [code] | |
| include/gui/utils/gui_event.hpp [code] | |
| include/gui/utils/iclipboard_handler.hpp [code] | |
| include/gui/utils/id_generator.hpp [code] | |
| include/gui/utils/ihelp_handler.hpp [code] | |
| include/gui/utils/init_registrar.hpp [code] | |
| include/gui/utils/intersect.hpp [code] | |
| include/gui/utils/math.hpp [code] | |
| include/gui/utils/matrix3.hpp [code] | |
| include/gui/utils/matrix4.hpp [code] | |
| include/gui/utils/mru_list.hpp [code] | |
| include/gui/utils/promote.hpp [code] | |
| include/gui/utils/quat.hpp [code] | |
| include/gui/utils/reporter.hpp [code] | |
| include/gui/utils/rgba_color.hpp [code] | |
| include/gui/utils/string_utils.hpp [code] | |
| include/gui/utils/system_path.hpp [code] | |
| include/gui/utils/table_names.hpp [code] | |
| include/gui/utils/thread_pool_engine.hpp [code] | |
| include/gui/utils/utils_macosx_.hpp [code] | |
| include/gui/utils/utils_platform.hpp [code] | |
| include/gui/utils/utils_win32_.hpp [code] | |
| include/gui/utils/vect2.hpp [code] | |
| include/gui/utils/vect3.hpp [code] | |
| include/gui/utils/vect4.hpp [code] | |
| include/gui/utils/view_event.hpp [code] | |
| include/gui/utils/widget_settings.hpp [code] | |
| include/gui/utils/worker_thread.hpp [code] | |
| include/gui/widgets/aln_crossaln/cross_aln_ds.hpp [code] | |
| include/gui/widgets/aln_crossaln/cross_aln_widget.hpp [code] | |
| include/gui/widgets/aln_crossaln/cross_panel_ir.hpp [code] | |
| include/gui/widgets/aln_data/align_ds.hpp [code] | |
| include/gui/widgets/aln_data/aln_scoring.hpp [code] | |
| include/gui/widgets/aln_data/color_panel.hpp [code] | |
| include/gui/widgets/aln_data/color_table_edit.hpp [code] | |
| include/gui/widgets/aln_data/combined_methods.hpp [code] | |
| include/gui/widgets/aln_data/data_elements.hpp [code] | |
| include/gui/widgets/aln_data/properties_panel_dlg.hpp [code] | |
| include/gui/widgets/aln_data/properties_panel_dlg_.hpp [code] | |
| include/gui/widgets/aln_data/quality_scoring_methods.hpp [code] | |
| include/gui/widgets/aln_data/scoring_method.hpp [code] | |
| include/gui/widgets/aln_data/scoring_methods_dlg.hpp [code] | |
| include/gui/widgets/aln_data/scoring_methods_dlg_.hpp [code] | |
| include/gui/widgets/aln_data/seqalign_container.hpp [code] | |
| include/gui/widgets/aln_data/seqalign_tests.hpp [code] | |
| include/gui/widgets/aln_data/seqid_comp.hpp [code] | |
| include/gui/widgets/aln_data/simple_methods.hpp [code] | |
| include/gui/widgets/aln_data/sparse_alignment.hpp [code] | |
| include/gui/widgets/aln_data/sparse_functions.hpp [code] | |
| include/gui/widgets/aln_data/sparse_iterator.hpp [code] | |
| include/gui/widgets/aln_data/template_methods.hpp [code] | |
| include/gui/widgets/aln_multiple/align_mark_handler.hpp [code] | |
| include/gui/widgets/aln_multiple/align_row.hpp [code] | |
| include/gui/widgets/aln_multiple/align_row_graph_cont.hpp [code] | |
| include/gui/widgets/aln_multiple/align_row_handle.hpp [code] | |
| include/gui/widgets/aln_multiple/aln_properties_dlg.hpp [code] | |
| include/gui/widgets/aln_multiple/aln_properties_dlg_.hpp [code] | |
| include/gui/widgets/aln_multiple/aln_vec_iterator.hpp [code] | |
| include/gui/widgets/aln_multiple/alnmulti_base_pane.hpp [code] | |
| include/gui/widgets/aln_multiple/alnmulti_ds.hpp [code] | |
| include/gui/widgets/aln_multiple/alnmulti_ds_builder.hpp [code] | |
| include/gui/widgets/aln_multiple/alnmulti_header.hpp [code] | |
| include/gui/widgets/aln_multiple/alnmulti_header_handler.hpp [code] | |
| include/gui/widgets/aln_multiple/alnmulti_model.hpp [code] | |
| include/gui/widgets/aln_multiple/alnmulti_pane.hpp [code] | |
| include/gui/widgets/aln_multiple/alnmulti_renderer.hpp [code] | |
| include/gui/widgets/aln_multiple/alnmulti_widget.hpp [code] | |
| include/gui/widgets/aln_multiple/alnvec_multi_ds.hpp [code] | |
| include/gui/widgets/aln_multiple/alnvec_row_graph.hpp [code] | |
| include/gui/widgets/aln_multiple/alnvec_row_handle.hpp [code] | |
| include/gui/widgets/aln_multiple/build_alnvec_job.hpp [code] | |
| include/gui/widgets/aln_multiple/build_options_dlg.hpp [code] | |
| include/gui/widgets/aln_multiple/build_options_dlg_.hpp [code] | |
| include/gui/widgets/aln_multiple/display_style.hpp [code] | |
| include/gui/widgets/aln_multiple/feature_graph.hpp [code] | |
| include/gui/widgets/aln_multiple/ialign_row.hpp [code] | |
| include/gui/widgets/aln_multiple/list_mvc.hpp [code] | |
| include/gui/widgets/aln_multiple/sel_list_controller.hpp [code] | |
| include/gui/widgets/aln_multiple/sel_list_model_impl.hpp [code] | |
| include/gui/widgets/aln_multiple/sparse_multi_ds.hpp [code] | |
| include/gui/widgets/aln_multiple/sparse_row_handle.hpp [code] | |
| include/gui/widgets/aln_multiple/trace_data.hpp [code] | |
| include/gui/widgets/aln_multiple/trace_graph.hpp [code] | |
| include/gui/widgets/aln_table/aln_table.hpp [code] | |
| include/gui/widgets/aln_table/aln_table_ds.hpp [code] | |
| include/gui/widgets/aln_table/alnspan_vertmodel.hpp [code] | |
| include/gui/widgets/aln_table/alnspan_widget.hpp [code] | |
| include/gui/widgets/aln_table/annot_compare.hpp [code] | |
| include/gui/widgets/aln_table/annot_compare_ds.hpp [code] | |
| include/gui/widgets/aln_table/span_settings_dlg.hpp [code] | |
| include/gui/widgets/aln_table/span_settings_dlg_.hpp [code] | |
| include/gui/widgets/config/config_dlg.hpp [code] | |
| include/gui/widgets/config/config_dlg_.hpp [code] | |
| include/gui/widgets/config/config_mediator.hpp [code] | |
| include/gui/widgets/config/config_panel.hpp [code] | |
| include/gui/widgets/config/edit_styles_dlg.hpp [code] | |
| include/gui/widgets/config/edit_styles_dlg_.hpp [code] | |
| include/gui/widgets/config/feat_check_browser.hpp [code] | |
| include/gui/widgets/config/feat_show_panel.hpp [code] | |
| include/gui/widgets/config/iconfig_mediator.hpp [code] | |
| include/gui/widgets/config/theme_config_panel.hpp [code] | |
| include/gui/widgets/config/theme_config_panel2.hpp [code] | |
| include/gui/widgets/config/theme_config_panel_.hpp [code] | |
| include/gui/widgets/config/theme_config_panel_base.hpp [code] | |
| include/gui/widgets/config/theme_dlg.hpp [code] | |
| include/gui/widgets/config/theme_dlg_.hpp [code] | |
| include/gui/widgets/config/theme_mediator.hpp [code] | |
| include/gui/widgets/config/theme_preview_mediator.hpp [code] | |
| include/gui/widgets/controls/anyref.hpp [code] | |
| include/gui/widgets/controls/anytype.hpp [code] | |
| include/gui/widgets/controls/group_map_widget.hpp [code] | |
| include/gui/widgets/controls/imap_item.hpp [code] | |
| include/gui/widgets/controls/map_control.hpp [code] | |
| include/gui/widgets/controls/map_item.hpp [code] | |
| include/gui/widgets/controls/print_event.hpp [code] | |
| include/gui/widgets/controls/row_model.hpp [code] | |
| include/gui/widgets/controls/scroll_panel.hpp [code] | |
| include/gui/widgets/controls/scrollable.hpp [code] | |
| include/gui/widgets/controls/selection_control.hpp [code] | |
| include/gui/widgets/controls/selection_model.hpp [code] | |
| include/gui/widgets/controls/table_column.hpp [code] | |
| include/gui/widgets/controls/table_control.hpp [code] | |
| include/gui/widgets/controls/table_header.hpp [code] | |
| include/gui/widgets/controls/table_model.hpp [code] | |
| include/gui/widgets/controls/table_utils.hpp [code] | |
| include/gui/widgets/controls/viewport.hpp [code] | |
| include/gui/widgets/controls/wizard_client.hpp [code] | |
| include/gui/widgets/controls/wizard_dlg.hpp [code] | |
| include/gui/widgets/controls/wizard_dlg_.hpp [code] | |
| include/gui/widgets/data/properties_panel.hpp [code] | |
| include/gui/widgets/data/ui_data_source.hpp [code] | |
| include/gui/widgets/data/ui_tool_with_gui.hpp [code] | |
| include/gui/widgets/feat_table/feat_table.hpp [code] | |
| include/gui/widgets/feat_table/feat_table_ds.hpp [code] | |
| include/gui/widgets/feat_table/filter_feature.hpp [code] | |
| include/gui/widgets/feat_table/filter_feature_.hpp [code] | |
| include/gui/widgets/fl/box.hpp [code] | |
| include/gui/widgets/fl/browser.hpp [code] | |
| include/gui/widgets/fl/button.hpp [code] | |
| include/gui/widgets/fl/checkbutton.hpp [code] | |
| include/gui/widgets/fl/choice.hpp [code] | |
| include/gui/widgets/fl/colorbutton.hpp [code] | |
| include/gui/widgets/fl/combobox.hpp [code] | |
| include/gui/widgets/fl/diag_panel.hpp [code] | |
| include/gui/widgets/fl/dialog_back.hpp [code] | |
| include/gui/widgets/fl/event_utils.hpp [code] | |
| include/gui/widgets/fl/fltk_timer.hpp [code] | |
| include/gui/widgets/fl/form.hpp [code] | |
| include/gui/widgets/fl/frame.hpp [code] | |
| include/gui/widgets/fl/frame_window.hpp [code] | |
| include/gui/widgets/fl/group.hpp [code] | |
| include/gui/widgets/fl/icontainer_client.hpp [code] | |
| include/gui/widgets/fl/input.hpp [code] | |
| include/gui/widgets/fl/layout.hpp [code] | |
| include/gui/widgets/fl/log_slider.hpp [code] | |
| include/gui/widgets/fl/menu.hpp [code] | |
| include/gui/widgets/fl/menu_bar.hpp [code] | |
| include/gui/widgets/fl/menu_item.hpp [code] | |
| include/gui/widgets/fl/message_box.hpp [code] | |
| include/gui/widgets/fl/multi_col_dlg.hpp [code] | |
| include/gui/widgets/fl/multi_col_dlg_.hpp [code] | |
| include/gui/widgets/fl/popup_menu.hpp [code] | |
| include/gui/widgets/fl/progress.hpp [code] | |
| include/gui/widgets/fl/progress_dlg.hpp [code] | |
| include/gui/widgets/fl/progress_dlg_.hpp [code] | |
| include/gui/widgets/fl/progress_dlg_ex.hpp [code] | |
| include/gui/widgets/fl/progress_dlg_ex_.hpp [code] | |
| include/gui/widgets/fl/rect.hpp [code] | |
| include/gui/widgets/fl/resize_mixin.hpp [code] | |
| include/gui/widgets/fl/resource_manager.hpp [code] | |
| include/gui/widgets/fl/return_button.hpp [code] | |
| include/gui/widgets/fl/roundbutton.hpp [code] | |
| include/gui/widgets/fl/scroll_group.hpp [code] | |
| include/gui/widgets/fl/scrollbar.hpp [code] | |
| include/gui/widgets/fl/splitter.hpp [code] | |
| include/gui/widgets/fl/status_bar.hpp [code] | |
| include/gui/widgets/fl/status_bar_ex.hpp [code] | |
| include/gui/widgets/fl/tab_control.hpp [code] | |
| include/gui/widgets/fl/table_panel.hpp [code] | |
| include/gui/widgets/fl/text.hpp [code] | |
| include/gui/widgets/fl/text_report_dlg.hpp [code] | |
| include/gui/widgets/fl/text_report_dlg_.hpp [code] | |
| include/gui/widgets/fl/tooltip.hpp [code] | |
| include/gui/widgets/fl/tree_browser.hpp [code] | |
| include/gui/widgets/fl/tree_item_browser.hpp [code] | |
| include/gui/widgets/fl/utils.hpp [code] | |
| include/gui/widgets/fl/vscroll.hpp [code] | |
| include/gui/widgets/Fl_Table/Fl_Table.H [code] | |
| include/gui/widgets/Fl_Table/Fl_Table_Row.H [code] | |
| include/gui/widgets/FLU/Flu_DND.h [code] | |
| include/gui/widgets/FLU/Flu_Enumerations.h [code] | |
| include/gui/widgets/FLU/flu_pixmaps.h [code] | |
| include/gui/widgets/FLU/Flu_Tree_Browser.h [code] | |
| include/gui/widgets/FLU/FluSimpleString.h [code] | |
| include/gui/widgets/gl/bookmarks_handler.hpp [code] | |
| include/gui/widgets/gl/dump_sysinfo.hpp [code] | |
| include/gui/widgets/gl/glcanvas.hpp [code] | |
| include/gui/widgets/gl/glpane_widget.hpp [code] | |
| include/gui/widgets/gl/graph_container.hpp [code] | |
| include/gui/widgets/gl/histogram_graph.hpp [code] | |
| include/gui/widgets/gl/html_active_area.hpp [code] | |
| include/gui/widgets/gl/ievent_handler.hpp [code] | |
| include/gui/widgets/gl/irenderable.hpp [code] | |
| include/gui/widgets/gl/legend_handler.hpp [code] | |
| include/gui/widgets/gl/linear_sel_handler.hpp [code] | |
| include/gui/widgets/gl/minimap_handler.hpp [code] | |
| include/gui/widgets/gl/mouse_zoom_handler.hpp [code] | |
| include/gui/widgets/gl/progress_panel.hpp [code] | |
| include/gui/widgets/gl/ruler.hpp [code] | |
| include/gui/widgets/gl/seqmark_handler.hpp [code] | |
| include/gui/widgets/hit_matrix/align_seq_table.hpp [code] | |
| include/gui/widgets/hit_matrix/choose_seq_dlg.hpp [code] | |
| include/gui/widgets/hit_matrix/choose_seq_dlg_.hpp [code] | |
| include/gui/widgets/hit_matrix/dense_ds.hpp [code] | |
| include/gui/widgets/hit_matrix/dense_hit.hpp [code] | |
| include/gui/widgets/hit_matrix/density_map_ds.hpp [code] | |
| include/gui/widgets/hit_matrix/diag_hit.hpp [code] | |
| include/gui/widgets/hit_matrix/histogram_dlg.hpp [code] | |
| include/gui/widgets/hit_matrix/histogram_dlg_.hpp [code] | |
| include/gui/widgets/hit_matrix/hit.hpp [code] | |
| include/gui/widgets/hit_matrix/hit_clustering.hpp [code] | |
| include/gui/widgets/hit_matrix/hit_coloring.hpp [code] | |
| include/gui/widgets/hit_matrix/hit_matrix_ds.hpp [code] | |
| include/gui/widgets/hit_matrix/hit_matrix_ds_builder.hpp [code] | |
| include/gui/widgets/hit_matrix/hit_matrix_graph.hpp [code] | |
| include/gui/widgets/hit_matrix/hit_matrix_pane.hpp [code] | |
| include/gui/widgets/hit_matrix/hit_matrix_renderer.hpp [code] | |
| include/gui/widgets/hit_matrix/hit_matrix_widget.hpp [code] | |
| include/gui/widgets/hit_matrix/score_dlg.hpp [code] | |
| include/gui/widgets/hit_matrix/score_dlg_.hpp [code] | |
| include/gui/widgets/hit_matrix/seq_graph.hpp [code] | |
| include/gui/widgets/hit_matrix/std_seg_hit.hpp [code] | |
| include/gui/widgets/object_list/object_list.hpp [code] | |
| include/gui/widgets/object_list/object_list_widget.hpp [code] | |
| include/gui/widgets/object_list/object_text.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_algorithm.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_dlg.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_dlg_.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_ds.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_edit.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_edit_.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_exception.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_filter.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_filter_.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_force.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_inline.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_label.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_lod.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_node.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_pane.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_radial.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_reader.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_rect_cladogram.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_render.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_scheme.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_slanted_cladogram.hpp [code] | |
| include/gui/widgets/phylo_tree/phylo_tree_widget.hpp [code] | |
| include/gui/widgets/seq/agp_table.hpp [code] | |
| include/gui/widgets/seq/feature_types_dlg.hpp [code] | |
| include/gui/widgets/seq/feature_types_dlg_.hpp [code] | |
| include/gui/widgets/seq/text_fasta.hpp [code] | |
| include/gui/widgets/seq/text_fasta_ds.hpp [code] | |
| include/gui/widgets/seq_graphic/annot_conf.hpp [code] | |
| include/gui/widgets/seq_graphic/annot_conf_dlg.hpp [code] | |
| include/gui/widgets/seq_graphic/annot_config_dlg_.hpp [code] | |
| include/gui/widgets/seq_graphic/color_conf.hpp [code] | |
| include/gui/widgets/seq_graphic/color_elements.hpp [code] | |
| include/gui/widgets/seq_graphic/default_layoutpolicy.hpp [code] | |
| include/gui/widgets/seq_graphic/default_policy.hpp [code] | |
| include/gui/widgets/seq_graphic/feat_decorate_conf.hpp [code] | |
| include/gui/widgets/seq_graphic/features_panel_ir.hpp [code] | |
| include/gui/widgets/seq_graphic/font_conf.hpp [code] | |
| include/gui/widgets/seq_graphic/hairline_options_dlg.hpp [code] | |
| include/gui/widgets/seq_graphic/hairline_options_dlg_.hpp [code] | |
| include/gui/widgets/seq_graphic/hist_conf_dlg.hpp [code] | |
| include/gui/widgets/seq_graphic/hist_options_dlg_.hpp [code] | |
| include/gui/widgets/seq_graphic/ilayoutpolicy.hpp [code] | |
| include/gui/widgets/seq_graphic/ipolicy.hpp [code] | |
| include/gui/widgets/seq_graphic/layout_conf.hpp [code] | |
| include/gui/widgets/seq_graphic/layout_config_dlg.hpp [code] | |
| include/gui/widgets/seq_graphic/layout_config_dlg_.hpp [code] | |
| include/gui/widgets/seq_graphic/layout_study.hpp [code] | |
| include/gui/widgets/seq_graphic/multilevel_layoutpolicy.hpp [code] | |
| include/gui/widgets/seq_graphic/pane_content_conf.hpp [code] | |
| include/gui/widgets/seq_graphic/seqgraphic_conf.hpp [code] | |
| include/gui/widgets/seq_graphic/seqgraphic_conf_med.hpp [code] | |
| include/gui/widgets/seq_graphic/seqgraphic_conf_panel.hpp [code] | |
| include/gui/widgets/seq_graphic/seqgraphic_ds.hpp [code] | |
| include/gui/widgets/seq_graphic/seqgraphic_job.hpp [code] | |
| include/gui/widgets/seq_graphic/seqgraphic_preview.hpp [code] | |
| include/gui/widgets/seq_graphic/seqgraphic_render.hpp [code] | |
| include/gui/widgets/seq_graphic/seqgraphic_widget.hpp [code] | |
| include/gui/widgets/seq_graphic/seqmarker_set_dlg.hpp [code] | |
| include/gui/widgets/seq_graphic/seqmarker_set_dlg_.hpp [code] | |
| include/gui/widgets/seq_text/seq_graph.hpp [code] | |
| include/gui/widgets/seq_text/seq_text_conf.hpp [code] | |
| include/gui/widgets/seq_text/seq_text_defs.hpp [code] | |
| include/gui/widgets/seq_text/seq_text_display_choice_list.hpp [code] | |
| include/gui/widgets/seq_text/seq_text_dlg.hpp [code] | |
| include/gui/widgets/seq_text/seq_text_dlg_.hpp [code] | |
| include/gui/widgets/seq_text/seq_text_ds.hpp [code] | |
| include/gui/widgets/seq_text/seq_text_featcolors_conf.hpp [code] | |
| include/gui/widgets/seq_text/seq_text_feature_list.hpp [code] | |
| include/gui/widgets/seq_text/seq_text_font_list.hpp [code] | |
| include/gui/widgets/seq_text/seq_text_geometry.hpp [code] | |
| include/gui/widgets/seq_text/seq_text_job.hpp [code] | |
| include/gui/widgets/seq_text/seq_text_pane.hpp [code] | |
| include/gui/widgets/seq_text/seq_text_pane_conf.hpp [code] | |
| include/gui/widgets/seq_text/seq_text_widget.hpp [code] | |
| include/gui/widgets/seq_text/seq_tick_graph.hpp [code] | |
| include/gui/widgets/seq_text/text_sel_handler.hpp [code] | |
| include/gui/widgets/seq_text/variation_graph.hpp [code] | |
| include/gui/widgets/serial_browse/serial_browser.hpp [code] | |
| include/gui/widgets/snp/job_progress_bar.hpp [code] | |
| include/gui/widgets/snp/link_button.hpp [code] | |
| include/gui/widgets/snp/snp_data.hpp [code] | |
| include/gui/widgets/snp/snp_markers.hpp [code] | |
| include/gui/widgets/snp/snp_table_ds.hpp [code] | |
| include/gui/widgets/snp/snp_table_widget.hpp [code] | |
| include/gui/widgets/snp/survey_browser.hpp [code] | |
| include/gui/widgets/snp/filter/algo_track_creator.hpp [code] | |
| include/gui/widgets/snp/filter/filter2.hpp [code] | |
| include/gui/widgets/snp/filter/group_checkboxes.hpp [code] | |
| include/gui/widgets/snp/filter/group_radios.hpp [code] | |
| include/gui/widgets/snp/filter/snp_filter.hpp [code] | |
| include/gui/widgets/snp/filter/snp_filter_list_dlg.hpp [code] | |
| include/gui/widgets/snp/filter/snp_filter_list_dlg_.hpp [code] | |
| include/gui/widgets/snp/filter/snp_filter_ui.hpp [code] | |
| include/gui/widgets/snp/filter/snp_filter_ui_.hpp [code] | |
| include/gui/widgets/snp/filter/track_creator_ui.hpp [code] | |
| include/gui/widgets/snp/filter/track_creator_ui_.hpp [code] | |
| include/gui/widgets/tax_tree/tax_tree.hpp [code] | |
| include/gui/widgets/tax_tree/tax_tree_ds.hpp [code] | |
| include/gui/widgets/workspace/dock_splitter.hpp [code] | |
| include/gui/widgets/workspace/splitter_ex.hpp [code] | |
| include/gui/widgets/workspace/tab_control_ex.hpp [code] | |
| include/gui/widgets/workspace/window_manager.hpp [code] | |
| include/gui/widgets/workspace/wm_caption_panel.hpp [code] | |
| include/gui/widgets/workspace/wm_client.hpp [code] | |
| include/gui/widgets/workspace/wm_container.hpp [code] | |
| include/gui/widgets/workspace/wm_dock_container.hpp [code] | |
| include/gui/widgets/workspace/wm_frame_window.hpp [code] | |
| include/gui/widgets/workspace/wm_splitter.hpp [code] | |
| include/gui/widgets/workspace/wm_tab_control.hpp [code] | |
| include/gui/widgets/workspace/workspace_window.hpp [code] | |
| include/html/commentdiag.hpp [code] | Diagnostic handler for embedding diagnostics in comments |
| include/html/components.hpp [code] | The HTML page |
| include/html/components.inl [code] | |
| include/html/error_codes.hpp [code] | |
| include/html/factory.hpp [code] | Class creation factory |
| include/html/html.hpp [code] | HTML classes |
| include/html/html.inl [code] | |
| include/html/html_exception.hpp [code] | HTML library exceptions |
| include/html/htmlhelper.hpp [code] | HTML library helper classes and functions |
| include/html/indentstream.hpp [code] | Indenting output stream support |
| include/html/jsmenu.hpp [code] | JavaScript popup menu support |
| include/html/node.hpp [code] | |
| include/html/node.inl [code] | |
| include/html/nodemap.hpp [code] | Various tag mappers classes |
| include/html/page.hpp [code] | The HTML page |
| include/html/pager.hpp [code] | |
| include/html/selection.hpp [code] | |
| include/html/writer_htmlenc.hpp [code] | CWriter_HTMLEncoder -- HTML-encode supplied data on the fly before passing it to a standard ostream |
| include/misc/error_codes.hpp [code] | |
| include/misc/cgi_redirect/redirect.hpp [code] | |
| include/misc/grid_cgi/cgi2grid.hpp [code] | |
| include/misc/grid_cgi/cgi_session_netcache.hpp [code] | |
| include/misc/grid_cgi/grid_cgiapp.hpp [code] | NetSchedule Framework specs |
| include/misc/grid_cgi/remote_cgiapp.hpp [code] | |
| include/misc/xmlwrapp/attributes.hpp [code] | This file contains the definition of the xml::attributes class |
| include/misc/xmlwrapp/document.hpp [code] | This file contains the definition of the xml::document class |
| include/misc/xmlwrapp/event_parser.hpp [code] | This file contains the definition of the xml::event_parser class |
| include/misc/xmlwrapp/namespace.hpp [code] | XML namespace API for XmlWrapp |
| include/misc/xmlwrapp/node.hpp [code] | This file contains the definition of the xml::node class |
| include/misc/xmlwrapp/node_set.hpp [code] | XPath execution result set for XmlWrapp |
| include/misc/xmlwrapp/nodes_view.hpp [code] | This file contains the definition of the xml::nodes_view and xml::const_nodes_view classes |
| include/misc/xmlwrapp/stylesheet.hpp [code] | This file contains the definition of the xslt::stylesheet class |
| include/misc/xmlwrapp/tree_parser.hpp [code] | This file contains the definition of the xml::tree_parser class |
| include/misc/xmlwrapp/xml_init.hpp [code] | This file contains the definition of the xml::init class |
| include/misc/xmlwrapp/xmlwrapp.hpp [code] | |
| include/misc/xmlwrapp/xpath_expression.hpp [code] | XPath expression storage for XmlWrapp |
| include/misc/xmlwrapp/xslt_init.hpp [code] | This file contains the definition of the xslt::init class |
| include/misc/xmlwrapp/xsltwrapp.hpp [code] | |
| include/misc/xmlwrapp/impl/_cbfo.hpp [code] | |
| include/objects/access/access__.hpp [code] | |
| include/objects/access/access_doxygen.h [code] | |
| include/objects/access/Link_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/access/Link_set_.hpp [code] | Data storage class |
| include/objects/access/NCBI_Access_module.hpp [code] | |
| include/objects/biblio/Affil.hpp [code] | |
| include/objects/biblio/Affil_.hpp [code] | Data storage class |
| include/objects/biblio/ArticleId.hpp [code] | User-defined methods of the data storage class |
| include/objects/biblio/ArticleId_.hpp [code] | Data storage class |
| include/objects/biblio/ArticleIdSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/biblio/ArticleIdSet_.hpp [code] | Data storage class |
| include/objects/biblio/Auth_list.hpp [code] | |
| include/objects/biblio/Auth_list_.hpp [code] | Data storage class |
| include/objects/biblio/Author.hpp [code] | |
| include/objects/biblio/Author_.hpp [code] | Data storage class |
| include/objects/biblio/biblio__.hpp [code] | |
| include/objects/biblio/biblio_doxygen.h [code] | |
| include/objects/biblio/Cit_art.hpp [code] | |
| include/objects/biblio/Cit_art_.hpp [code] | Data storage class |
| include/objects/biblio/Cit_book.hpp [code] | |
| include/objects/biblio/Cit_book_.hpp [code] | Data storage class |
| include/objects/biblio/Cit_gen.hpp [code] | |
| include/objects/biblio/Cit_gen_.hpp [code] | Data storage class |
| include/objects/biblio/Cit_jour.hpp [code] | |
| include/objects/biblio/Cit_jour_.hpp [code] | Data storage class |
| include/objects/biblio/Cit_let.hpp [code] | |
| include/objects/biblio/Cit_let_.hpp [code] | Data storage class |
| include/objects/biblio/Cit_pat.hpp [code] | |
| include/objects/biblio/Cit_pat_.hpp [code] | Data storage class |
| include/objects/biblio/Cit_proc.hpp [code] | |
| include/objects/biblio/Cit_proc_.hpp [code] | Data storage class |
| include/objects/biblio/Cit_sub.hpp [code] | |
| include/objects/biblio/Cit_sub_.hpp [code] | Data storage class |
| include/objects/biblio/CitRetract.hpp [code] | User-defined methods of the data storage class |
| include/objects/biblio/CitRetract_.hpp [code] | Data storage class |
| include/objects/biblio/DOI.hpp [code] | User-defined methods of the data storage class |
| include/objects/biblio/DOI_.hpp [code] | Data storage class |
| include/objects/biblio/Id_pat.hpp [code] | |
| include/objects/biblio/Id_pat_.hpp [code] | Data storage class |
| include/objects/biblio/Imprint.hpp [code] | User-defined methods of the data storage class |
| include/objects/biblio/Imprint_.hpp [code] | Data storage class |
| include/objects/biblio/label_util.hpp [code] | |
| include/objects/biblio/MedlineUID.hpp [code] | User-defined methods of the data storage class |
| include/objects/biblio/MedlineUID_.hpp [code] | Data storage class |
| include/objects/biblio/Meeting.hpp [code] | User-defined methods of the data storage class |
| include/objects/biblio/Meeting_.hpp [code] | Data storage class |
| include/objects/biblio/NCBI_Biblio_module.hpp [code] | |
| include/objects/biblio/Patent_priority.hpp [code] | User-defined methods of the data storage class |
| include/objects/biblio/Patent_priority_.hpp [code] | Data storage class |
| include/objects/biblio/PII.hpp [code] | User-defined methods of the data storage class |
| include/objects/biblio/PII_.hpp [code] | Data storage class |
| include/objects/biblio/PmcID.hpp [code] | User-defined methods of the data storage class |
| include/objects/biblio/PmcID_.hpp [code] | Data storage class |
| include/objects/biblio/PmcPid.hpp [code] | User-defined methods of the data storage class |
| include/objects/biblio/PmcPid_.hpp [code] | Data storage class |
| include/objects/biblio/PmPid.hpp [code] | User-defined methods of the data storage class |
| include/objects/biblio/PmPid_.hpp [code] | Data storage class |
| include/objects/biblio/PubMedId.hpp [code] | User-defined methods of the data storage class |
| include/objects/biblio/PubMedId_.hpp [code] | Data storage class |
| include/objects/biblio/PubStatus.hpp [code] | User-defined methods of the data storage class |
| include/objects/biblio/PubStatus_.hpp [code] | Data storage class |
| include/objects/biblio/PubStatusDate.hpp [code] | User-defined methods of the data storage class |
| include/objects/biblio/PubStatusDate_.hpp [code] | Data storage class |
| include/objects/biblio/PubStatusDateSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/biblio/PubStatusDateSet_.hpp [code] | Data storage class |
| include/objects/biblio/Title.hpp [code] | |
| include/objects/biblio/Title_.hpp [code] | Data storage class |
| include/objects/biotree/biotree__.hpp [code] | |
| include/objects/biotree/biotree_doxygen.h [code] | |
| include/objects/biotree/BioTreeContainer.hpp [code] | User-defined methods of the data storage class |
| include/objects/biotree/BioTreeContainer_.hpp [code] | Data storage class |
| include/objects/biotree/DistanceMatrix.hpp [code] | User-defined methods of the data storage class |
| include/objects/biotree/DistanceMatrix_.hpp [code] | Data storage class |
| include/objects/biotree/FeatureDescr.hpp [code] | User-defined methods of the data storage class |
| include/objects/biotree/FeatureDescr_.hpp [code] | Data storage class |
| include/objects/biotree/FeatureDictSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/biotree/FeatureDictSet_.hpp [code] | Data storage class |
| include/objects/biotree/NCBI_BioTree_module.hpp [code] | |
| include/objects/biotree/Node.hpp [code] | User-defined methods of the data storage class |
| include/objects/biotree/Node_.hpp [code] | Data storage class |
| include/objects/biotree/NodeFeature.hpp [code] | User-defined methods of the data storage class |
| include/objects/biotree/NodeFeature_.hpp [code] | Data storage class |
| include/objects/biotree/NodeFeatureSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/biotree/NodeFeatureSet_.hpp [code] | Data storage class |
| include/objects/biotree/NodeSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/biotree/NodeSet_.hpp [code] | Data storage class |
| include/objects/blast/Bla_com_opt_db_res_by_orga.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Bla_com_opt_db_res_by_orga_.hpp [code] | Data storage class |
| include/objects/blast/Blas_comm_opti_disco_megab.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blas_comm_opti_disco_megab_.hpp [code] | Data storage class |
| include/objects/blast/Blas_comm_opti_nucle_query.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blas_comm_opti_nucle_query_.hpp [code] | Data storage class |
| include/objects/blast/Blas_comm_opti_query_filte.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blas_comm_opti_query_filte_.hpp [code] | Data storage class |
| include/objects/blast/Blas_comm_opti_repea_filte.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blas_comm_opti_repea_filte_.hpp [code] | Data storage class |
| include/objects/blast/Blas_get_searc_resul_reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blas_get_searc_resul_reply_.hpp [code] | Data storage class |
| include/objects/blast/Blas_get_searc_resul_reque.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blas_get_searc_resul_reque_.hpp [code] | Data storage class |
| include/objects/blast/Blas_get_searc_statu_reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blas_get_searc_statu_reply_.hpp [code] | Data storage class |
| include/objects/blast/Blas_get_searc_statu_reque.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blas_get_searc_statu_reque_.hpp [code] | Data storage class |
| include/objects/blast/Blas_get_searc_strat_reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blas_get_searc_strat_reply_.hpp [code] | Data storage class |
| include/objects/blast/Blas_get_searc_strat_reque.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blas_get_searc_strat_reque_.hpp [code] | Data storage class |
| include/objects/blast/Blas_queu_searc_reque_lite.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blas_queu_searc_reque_lite_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_alignment_for_query.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_alignment_for_query_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_common_options.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_common_options_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_cutoff.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_cutoff_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_database.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_database_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_database_info.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_database_info_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_error.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_error_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_error_code.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_error_code_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_error_flags.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_error_flags_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_finish_params_reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_finish_params_reply_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_frame_type.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_frame_type_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_get_databases_reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_get_databases_reply_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_get_matrices_reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_get_matrices_reply_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_get_parameter_reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_get_parameter_reply_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_get_paramsets_reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_get_paramsets_reply_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_get_programs_reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_get_programs_reply_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_get_queries_reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_get_queries_reply_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_get_seq_parts_reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_get_seq_parts_reply_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_get_sequenc_request.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_get_sequenc_request_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_get_sequences_reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_get_sequences_reply_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_ka_block.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_ka_block_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_mask.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_mask_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_matrix_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_matrix_id_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_options_lite.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_options_lite_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_parameter.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_parameter_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_parameter_info.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_parameter_info_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_parameters.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_parameters_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_phi_alignments.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_phi_alignments_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_program_info.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_program_info_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_queries.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_queries_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_queue_search_reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_queue_search_reply_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_queue_search_reques.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_queue_search_reques_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_range.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_range_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_reply_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_reply_body.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_reply_body_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_request.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_request_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_request_body.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_request_body_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_residue_type.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_residue_type_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_result_types.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_result_types_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_seq_part_data.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_seq_part_data_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_seqtech.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_seqtech_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_simple_alignment.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_simple_alignment_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_simple_results.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_simple_results_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_strand_type.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_strand_type_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_subject.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_subject_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_task_info.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_task_info_.hpp [code] | Data storage class |
| include/objects/blast/Blast4_value.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast4_value_.hpp [code] | Data storage class |
| include/objects/blast/blast__.hpp [code] | |
| include/objects/blast/Blast_commo_optio_db_restr.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast_commo_optio_db_restr_.hpp [code] | Data storage class |
| include/objects/blast/Blast_common_option_scorin.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast_common_option_scorin_.hpp [code] | Data storage class |
| include/objects/blast/blast_doxygen.h [code] | |
| include/objects/blast/Blast_finish_params_reques.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast_finish_params_reques_.hpp [code] | Data storage class |
| include/objects/blast/Blast_get_reque_info_reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast_get_reque_info_reply_.hpp [code] | Data storage class |
| include/objects/blast/Blast_get_reque_info_reque.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast_get_reque_info_reque_.hpp [code] | Data storage class |
| include/objects/blast/Blast_get_seq_parts_reques.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/Blast_get_seq_parts_reques_.hpp [code] | Data storage class |
| include/objects/blast/blastclient.hpp [code] | User-defined methods of the data storage class |
| include/objects/blast/blastclient_.hpp [code] | Data storage class |
| include/objects/blast/names.hpp [code] | Names used in blast4 network communications |
| include/objects/blast/NCBI_Blast4_module.hpp [code] | |
| include/objects/blastdb/Blast_db_mask_info.hpp [code] | User-defined methods of the data storage class |
| include/objects/blastdb/Blast_db_mask_info_.hpp [code] | Data storage class |
| include/objects/blastdb/Blast_def_line.hpp [code] | User-defined methods of the data storage class |
| include/objects/blastdb/Blast_def_line_.hpp [code] | Data storage class |
| include/objects/blastdb/Blast_def_line_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/blastdb/Blast_def_line_set_.hpp [code] | Data storage class |
| include/objects/blastdb/Blast_filter_program.hpp [code] | User-defined methods of the data storage class |
| include/objects/blastdb/Blast_filter_program_.hpp [code] | Data storage class |
| include/objects/blastdb/Blast_mask_list.hpp [code] | User-defined methods of the data storage class |
| include/objects/blastdb/Blast_mask_list_.hpp [code] | Data storage class |
| include/objects/blastdb/blastdb__.hpp [code] | |
| include/objects/blastdb/blastdb_doxygen.h [code] | |
| include/objects/blastdb/defline_extra.hpp [code] | Blast defline related defines |
| include/objects/blastdb/NCBI_BlastDL_module.hpp [code] | |
| include/objects/blastxml/BlastOutput.hpp [code] | User-defined methods of the data storage class |
| include/objects/blastxml/BlastOutput_.hpp [code] | Data storage class |
| include/objects/blastxml/blastxml__.hpp [code] | |
| include/objects/blastxml/blastxml_doxygen.h [code] | |
| include/objects/blastxml/Hit.hpp [code] | User-defined methods of the data storage class |
| include/objects/blastxml/Hit_.hpp [code] | Data storage class |
| include/objects/blastxml/Hsp.hpp [code] | User-defined methods of the data storage class |
| include/objects/blastxml/Hsp_.hpp [code] | Data storage class |
| include/objects/blastxml/Iteration.hpp [code] | User-defined methods of the data storage class |
| include/objects/blastxml/Iteration_.hpp [code] | Data storage class |
| include/objects/blastxml/NCBI_BlastOutput_module.hpp [code] | |
| include/objects/blastxml/Parameters.hpp [code] | User-defined methods of the data storage class |
| include/objects/blastxml/Parameters_.hpp [code] | Data storage class |
| include/objects/blastxml/Statistics.hpp [code] | User-defined methods of the data storage class |
| include/objects/blastxml/Statistics_.hpp [code] | Data storage class |
| include/objects/cdd/Algorithm_type.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Algorithm_type_.hpp [code] | Data storage class |
| include/objects/cdd/Align_annot.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Align_annot_.hpp [code] | Data storage class |
| include/objects/cdd/Align_annot_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Align_annot_set_.hpp [code] | Data storage class |
| include/objects/cdd/Cdd.hpp [code] | |
| include/objects/cdd/Cdd_.hpp [code] | Data storage class |
| include/objects/cdd/cdd__.hpp [code] | |
| include/objects/cdd/Cdd_book_ref.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Cdd_book_ref_.hpp [code] | Data storage class |
| include/objects/cdd/Cdd_descr.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Cdd_descr_.hpp [code] | Data storage class |
| include/objects/cdd/Cdd_descr_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Cdd_descr_set_.hpp [code] | Data storage class |
| include/objects/cdd/cdd_doxygen.h [code] | |
| include/objects/cdd/Cdd_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Cdd_id_.hpp [code] | Data storage class |
| include/objects/cdd/Cdd_id_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Cdd_id_set_.hpp [code] | Data storage class |
| include/objects/cdd/Cdd_org_ref.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Cdd_org_ref_.hpp [code] | Data storage class |
| include/objects/cdd/Cdd_org_ref_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Cdd_org_ref_set_.hpp [code] | Data storage class |
| include/objects/cdd/Cdd_pref_node_descr.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Cdd_pref_node_descr_.hpp [code] | Data storage class |
| include/objects/cdd/Cdd_pref_node_descr_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Cdd_pref_node_descr_set_.hpp [code] | Data storage class |
| include/objects/cdd/Cdd_pref_nodes.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Cdd_pref_nodes_.hpp [code] | Data storage class |
| include/objects/cdd/Cdd_Project.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Cdd_Project_.hpp [code] | Data storage class |
| include/objects/cdd/Cdd_repeat.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Cdd_repeat_.hpp [code] | Data storage class |
| include/objects/cdd/Cdd_Script.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Cdd_Script_.hpp [code] | Data storage class |
| include/objects/cdd/Cdd_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Cdd_set_.hpp [code] | Data storage class |
| include/objects/cdd/Cdd_tree.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Cdd_tree_.hpp [code] | Data storage class |
| include/objects/cdd/Cdd_tree_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Cdd_tree_set_.hpp [code] | Data storage class |
| include/objects/cdd/Cdd_Viewer.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Cdd_Viewer_.hpp [code] | Data storage class |
| include/objects/cdd/Cdd_Viewer_Rect.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Cdd_Viewer_Rect_.hpp [code] | Data storage class |
| include/objects/cdd/Domain_parent.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Domain_parent_.hpp [code] | Data storage class |
| include/objects/cdd/Feature_evidence.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Feature_evidence_.hpp [code] | Data storage class |
| include/objects/cdd/Global_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Global_id_.hpp [code] | Data storage class |
| include/objects/cdd/Matrix.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Matrix_.hpp [code] | Data storage class |
| include/objects/cdd/NCBI_Cdd_module.hpp [code] | |
| include/objects/cdd/Node_annotation.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Node_annotation_.hpp [code] | Data storage class |
| include/objects/cdd/Reject_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Reject_id_.hpp [code] | Data storage class |
| include/objects/cdd/SeqTree_node.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/SeqTree_node_.hpp [code] | Data storage class |
| include/objects/cdd/Sequence_tree.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Sequence_tree_.hpp [code] | Data storage class |
| include/objects/cdd/Triangle.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Triangle_.hpp [code] | Data storage class |
| include/objects/cdd/Update_align.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Update_align_.hpp [code] | Data storage class |
| include/objects/cdd/Update_comment.hpp [code] | User-defined methods of the data storage class |
| include/objects/cdd/Update_comment_.hpp [code] | Data storage class |
| include/objects/cn3d/cn3d__.hpp [code] | |
| include/objects/cn3d/Cn3d_backbone_label_style.hpp [code] | User-defined methods of the data storage class |
| include/objects/cn3d/Cn3d_backbone_label_style_.hpp [code] | Data storage class |
| include/objects/cn3d/Cn3d_backbone_style.hpp [code] | User-defined methods of the data storage class |
| include/objects/cn3d/Cn3d_backbone_style_.hpp [code] | Data storage class |
| include/objects/cn3d/Cn3d_backbone_type.hpp [code] | User-defined methods of the data storage class |
| include/objects/cn3d/Cn3d_backbone_type_.hpp [code] | Data storage class |
| include/objects/cn3d/Cn3d_color.hpp [code] | User-defined methods of the data storage class |
| include/objects/cn3d/Cn3d_color_.hpp [code] | Data storage class |
| include/objects/cn3d/Cn3d_color_scheme.hpp [code] | User-defined methods of the data storage class |
| include/objects/cn3d/Cn3d_color_scheme_.hpp [code] | Data storage class |
| include/objects/cn3d/cn3d_doxygen.h [code] | |
| include/objects/cn3d/Cn3d_drawing_style.hpp [code] | User-defined methods of the data storage class |
| include/objects/cn3d/Cn3d_drawing_style_.hpp [code] | Data storage class |
| include/objects/cn3d/Cn3d_general_style.hpp [code] | User-defined methods of the data storage class |
| include/objects/cn3d/Cn3d_general_style_.hpp [code] | Data storage class |
| include/objects/cn3d/Cn3d_GL_matrix.hpp [code] | User-defined methods of the data storage class |
| include/objects/cn3d/Cn3d_GL_matrix_.hpp [code] | Data storage class |
| include/objects/cn3d/Cn3d_molecule_location.hpp [code] | User-defined methods of the data storage class |
| include/objects/cn3d/Cn3d_molecule_location_.hpp [code] | Data storage class |
| include/objects/cn3d/Cn3d_object_location.hpp [code] | User-defined methods of the data storage class |
| include/objects/cn3d/Cn3d_object_location_.hpp [code] | Data storage class |
| include/objects/cn3d/Cn3d_residue_range.hpp [code] | User-defined methods of the data storage class |
| include/objects/cn3d/Cn3d_residue_range_.hpp [code] | Data storage class |
| include/objects/cn3d/Cn3d_style_dictionary.hpp [code] | User-defined methods of the data storage class |
| include/objects/cn3d/Cn3d_style_dictionary_.hpp [code] | Data storage class |
| include/objects/cn3d/Cn3d_style_settings.hpp [code] | User-defined methods of the data storage class |
| include/objects/cn3d/Cn3d_style_settings_.hpp [code] | Data storage class |
| include/objects/cn3d/Cn3d_style_settings_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/cn3d/Cn3d_style_settings_set_.hpp [code] | Data storage class |
| include/objects/cn3d/Cn3d_style_table_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/cn3d/Cn3d_style_table_id_.hpp [code] | Data storage class |
| include/objects/cn3d/Cn3d_style_table_item.hpp [code] | User-defined methods of the data storage class |
| include/objects/cn3d/Cn3d_style_table_item_.hpp [code] | Data storage class |
| include/objects/cn3d/Cn3d_user_annotation.hpp [code] | User-defined methods of the data storage class |
| include/objects/cn3d/Cn3d_user_annotation_.hpp [code] | Data storage class |
| include/objects/cn3d/Cn3d_user_annotations.hpp [code] | User-defined methods of the data storage class |
| include/objects/cn3d/Cn3d_user_annotations_.hpp [code] | Data storage class |
| include/objects/cn3d/Cn3d_vector.hpp [code] | User-defined methods of the data storage class |
| include/objects/cn3d/Cn3d_vector_.hpp [code] | Data storage class |
| include/objects/cn3d/Cn3d_view_settings.hpp [code] | User-defined methods of the data storage class |
| include/objects/cn3d/Cn3d_view_settings_.hpp [code] | Data storage class |
| include/objects/cn3d/NCBI_Cn3d_module.hpp [code] | |
| include/objects/docsum/Assay.hpp [code] | User-defined methods of the data storage class |
| include/objects/docsum/Assay_.hpp [code] | Data storage class |
| include/objects/docsum/Assembly.hpp [code] | User-defined methods of the data storage class |
| include/objects/docsum/Assembly_.hpp [code] | Data storage class |
| include/objects/docsum/BaseURL.hpp [code] | User-defined methods of the data storage class |
| include/objects/docsum/BaseURL_.hpp [code] | Data storage class |
| include/objects/docsum/Component.hpp [code] | User-defined methods of the data storage class |
| include/objects/docsum/Component_.hpp [code] | Data storage class |
| include/objects/docsum/Docsum_3_1_module.hpp [code] | |
| include/objects/docsum/docsum__.hpp [code] | |
| include/objects/docsum/docsum_doxygen.h [code] | |
| include/objects/docsum/ExchangeSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/docsum/ExchangeSet_.hpp [code] | Data storage class |
| include/objects/docsum/FxnSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/docsum/FxnSet_.hpp [code] | Data storage class |
| include/objects/docsum/MapLoc.hpp [code] | User-defined methods of the data storage class |
| include/objects/docsum/MapLoc_.hpp [code] | Data storage class |
| include/objects/docsum/PrimarySequence.hpp [code] | User-defined methods of the data storage class |
| include/objects/docsum/PrimarySequence_.hpp [code] | Data storage class |
| include/objects/docsum/Rs.hpp [code] | User-defined methods of the data storage class |
| include/objects/docsum/Rs_.hpp [code] | Data storage class |
| include/objects/docsum/RsLinkout.hpp [code] | User-defined methods of the data storage class |
| include/objects/docsum/RsLinkout_.hpp [code] | Data storage class |
| include/objects/docsum/RsStruct.hpp [code] | User-defined methods of the data storage class |
| include/objects/docsum/RsStruct_.hpp [code] | Data storage class |
| include/objects/docsum/Ss.hpp [code] | User-defined methods of the data storage class |
| include/objects/docsum/Ss_.hpp [code] | Data storage class |
| include/objects/entrez2/E2Reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/E2Reply_.hpp [code] | Data storage class |
| include/objects/entrez2/E2Request.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/E2Request_.hpp [code] | Data storage class |
| include/objects/entrez2/entrez2__.hpp [code] | |
| include/objects/entrez2/Entrez2_boolean_element.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_boolean_element_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_boolean_exp.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_boolean_exp_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_boolean_reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_boolean_reply_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_boolean_term.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_boolean_term_.hpp [code] | Data storage class |
| include/objects/entrez2/entrez2_client.hpp [code] | |
| include/objects/entrez2/entrez2_client_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_db_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_db_id_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_db_info.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_db_info_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_docsum.hpp [code] | |
| include/objects/entrez2/Entrez2_docsum_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_docsum_data.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_docsum_data_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_docsum_field_info.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_docsum_field_info_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_docsum_field_type.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_docsum_field_type_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_docsum_list.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_docsum_list_.hpp [code] | Data storage class |
| include/objects/entrez2/entrez2_doxygen.h [code] | |
| include/objects/entrez2/Entrez2_dt.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_dt_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_dt_filter.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_dt_filter_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_eval_boolean.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_eval_boolean_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_field_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_field_id_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_field_info.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_field_info_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_get_links.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_get_links_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_hier_node.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_hier_node_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_hier_query.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_hier_query_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_id_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_id_list.hpp [code] | |
| include/objects/entrez2/Entrez2_id_list_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_info.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_info_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_limits.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_limits_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_link_count.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_link_count_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_link_count_list.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_link_count_list_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_link_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_link_id_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_link_info.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_link_info_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_link_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_link_set_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_operator.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_operator_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_reply_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_request.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_request_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_term.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_term_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_term_list.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_term_list_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_term_pos.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_term_pos_.hpp [code] | Data storage class |
| include/objects/entrez2/Entrez2_term_query.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrez2/Entrez2_term_query_.hpp [code] | Data storage class |
| include/objects/entrez2/NCBI_Entrez2_module.hpp [code] | |
| include/objects/entrezgene/Entrezgene.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrezgene/Entrezgene_.hpp [code] | Data storage class |
| include/objects/entrezgene/entrezgene__.hpp [code] | |
| include/objects/entrezgene/entrezgene_doxygen.h [code] | |
| include/objects/entrezgene/Entrezgene_Set.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrezgene/Entrezgene_Set_.hpp [code] | Data storage class |
| include/objects/entrezgene/Gene_commentary.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrezgene/Gene_commentary_.hpp [code] | Data storage class |
| include/objects/entrezgene/Gene_source.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrezgene/Gene_source_.hpp [code] | Data storage class |
| include/objects/entrezgene/Gene_track.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrezgene/Gene_track_.hpp [code] | Data storage class |
| include/objects/entrezgene/Maps.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrezgene/Maps_.hpp [code] | Data storage class |
| include/objects/entrezgene/NCBI_Entrezgene_module.hpp [code] | |
| include/objects/entrezgene/Other_source.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrezgene/Other_source_.hpp [code] | Data storage class |
| include/objects/entrezgene/Xtra_Terms.hpp [code] | User-defined methods of the data storage class |
| include/objects/entrezgene/Xtra_Terms_.hpp [code] | Data storage class |
| include/objects/featdef/FeatDef.hpp [code] | User-defined methods of the data storage class |
| include/objects/featdef/FeatDef_.hpp [code] | Data storage class |
| include/objects/featdef/featdef__.hpp [code] | |
| include/objects/featdef/featdef_doxygen.h [code] | |
| include/objects/featdef/FeatDefGroupSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/featdef/FeatDefGroupSet_.hpp [code] | Data storage class |
| include/objects/featdef/FeatDefSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/featdef/FeatDefSet_.hpp [code] | Data storage class |
| include/objects/featdef/FeatDispGroup.hpp [code] | User-defined methods of the data storage class |
| include/objects/featdef/FeatDispGroup_.hpp [code] | Data storage class |
| include/objects/featdef/FeatDispGroupSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/featdef/FeatDispGroupSet_.hpp [code] | Data storage class |
| include/objects/featdef/FeatMolType.hpp [code] | User-defined methods of the data storage class |
| include/objects/featdef/FeatMolType_.hpp [code] | Data storage class |
| include/objects/featdef/NCBI_FeatDef_module.hpp [code] | |
| include/objects/gbseq/GBAuthor.hpp [code] | User-defined methods of the data storage class |
| include/objects/gbseq/GBAuthor_.hpp [code] | Data storage class |
| include/objects/gbseq/GBFeature.hpp [code] | User-defined methods of the data storage class |
| include/objects/gbseq/GBFeature_.hpp [code] | Data storage class |
| include/objects/gbseq/GBInterval.hpp [code] | User-defined methods of the data storage class |
| include/objects/gbseq/GBInterval_.hpp [code] | Data storage class |
| include/objects/gbseq/GBKeyword.hpp [code] | User-defined methods of the data storage class |
| include/objects/gbseq/GBKeyword_.hpp [code] | Data storage class |
| include/objects/gbseq/GBQualifier.hpp [code] | User-defined methods of the data storage class |
| include/objects/gbseq/GBQualifier_.hpp [code] | Data storage class |
| include/objects/gbseq/GBReference.hpp [code] | User-defined methods of the data storage class |
| include/objects/gbseq/GBReference_.hpp [code] | Data storage class |
| include/objects/gbseq/GBSecondary_accn.hpp [code] | User-defined methods of the data storage class |
| include/objects/gbseq/GBSecondary_accn_.hpp [code] | Data storage class |
| include/objects/gbseq/GBSeq.hpp [code] | User-defined methods of the data storage class |
| include/objects/gbseq/GBSeq_.hpp [code] | Data storage class |
| include/objects/gbseq/gbseq__.hpp [code] | |
| include/objects/gbseq/gbseq_doxygen.h [code] | |
| include/objects/gbseq/GBSeqid.hpp [code] | User-defined methods of the data storage class |
| include/objects/gbseq/GBSeqid_.hpp [code] | Data storage class |
| include/objects/gbseq/GBSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/gbseq/GBSet_.hpp [code] | Data storage class |
| include/objects/gbseq/GBTag.hpp [code] | User-defined methods of the data storage class |
| include/objects/gbseq/GBTag_.hpp [code] | Data storage class |
| include/objects/gbseq/GBTagNames.hpp [code] | User-defined methods of the data storage class |
| include/objects/gbseq/GBTagNames_.hpp [code] | Data storage class |
| include/objects/gbseq/GBTags.hpp [code] | User-defined methods of the data storage class |
| include/objects/gbseq/GBTags_.hpp [code] | Data storage class |
| include/objects/gbseq/GBTagset.hpp [code] | User-defined methods of the data storage class |
| include/objects/gbseq/GBTagset_.hpp [code] | Data storage class |
| include/objects/gbseq/GBTagsetRules.hpp [code] | User-defined methods of the data storage class |
| include/objects/gbseq/GBTagsetRules_.hpp [code] | Data storage class |
| include/objects/gbseq/GBTagsetRuleSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/gbseq/GBTagsetRuleSet_.hpp [code] | Data storage class |
| include/objects/gbseq/GBXref.hpp [code] | User-defined methods of the data storage class |
| include/objects/gbseq/GBXref_.hpp [code] | Data storage class |
| include/objects/gbseq/NCBI_GBSeq_module.hpp [code] | |
| include/objects/general/Date.hpp [code] | |
| include/objects/general/Date_.hpp [code] | Data storage class |
| include/objects/general/Date_std.hpp [code] | |
| include/objects/general/Date_std_.hpp [code] | Data storage class |
| include/objects/general/Dbtag.hpp [code] | |
| include/objects/general/Dbtag_.hpp [code] | Data storage class |
| include/objects/general/general__.hpp [code] | |
| include/objects/general/general_doxygen.h [code] | |
| include/objects/general/general_exception.hpp [code] | |
| include/objects/general/Int_fuzz.hpp [code] | |
| include/objects/general/Int_fuzz_.hpp [code] | Data storage class |
| include/objects/general/Name_std.hpp [code] | |
| include/objects/general/Name_std_.hpp [code] | Data storage class |
| include/objects/general/NCBI_General_module.hpp [code] | |
| include/objects/general/Object_id.hpp [code] | |
| include/objects/general/Object_id_.hpp [code] | Data storage class |
| include/objects/general/Person_id.hpp [code] | |
| include/objects/general/Person_id_.hpp [code] | Data storage class |
| include/objects/general/uoconv.hpp [code] | Converts between User-objects and arbitrary other serializable objects |
| include/objects/general/User_field.hpp [code] | |
| include/objects/general/User_field_.hpp [code] | Data storage class |
| include/objects/general/User_object.hpp [code] | |
| include/objects/general/User_object_.hpp [code] | Data storage class |
| include/objects/genomecoll/GC_Assembly.hpp [code] | User-defined methods of the data storage class |
| include/objects/genomecoll/GC_Assembly_.hpp [code] | Data storage class |
| include/objects/genomecoll/GC_Genome.hpp [code] | User-defined methods of the data storage class |
| include/objects/genomecoll/GC_Genome_.hpp [code] | Data storage class |
| include/objects/genomecoll/GC_GenomicPart.hpp [code] | User-defined methods of the data storage class |
| include/objects/genomecoll/GC_GenomicPart_.hpp [code] | Data storage class |
| include/objects/genomecoll/GC_Project.hpp [code] | User-defined methods of the data storage class |
| include/objects/genomecoll/GC_Project_.hpp [code] | Data storage class |
| include/objects/genomecoll/GC_Replicon.hpp [code] | User-defined methods of the data storage class |
| include/objects/genomecoll/GC_Replicon_.hpp [code] | Data storage class |
| include/objects/genomecoll/GC_Scaf_stats.hpp [code] | User-defined methods of the data storage class |
| include/objects/genomecoll/GC_Scaf_stats_.hpp [code] | Data storage class |
| include/objects/genomecoll/GC_Sequence.hpp [code] | User-defined methods of the data storage class |
| include/objects/genomecoll/GC_Sequence_.hpp [code] | Data storage class |
| include/objects/genomecoll/GC_SequenceStats.hpp [code] | User-defined methods of the data storage class |
| include/objects/genomecoll/GC_SequenceStats_.hpp [code] | Data storage class |
| include/objects/genomecoll/genome_collection__.hpp [code] | |
| include/objects/genomecoll/genome_collection_doxygen.h [code] | |
| include/objects/genomecoll/NCBI_GenomeCollection_module.hpp [code] | |
| include/objects/homologene/HG_Alignment.hpp [code] | User-defined methods of the data storage class |
| include/objects/homologene/HG_Alignment_.hpp [code] | Data storage class |
| include/objects/homologene/HG_AlignmentSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/homologene/HG_AlignmentSet_.hpp [code] | Data storage class |
| include/objects/homologene/HG_Commentary.hpp [code] | User-defined methods of the data storage class |
| include/objects/homologene/HG_Commentary_.hpp [code] | Data storage class |
| include/objects/homologene/HG_CommentaryContainer.hpp [code] | User-defined methods of the data storage class |
| include/objects/homologene/HG_CommentaryContainer_.hpp [code] | Data storage class |
| include/objects/homologene/HG_CommentarySet.hpp [code] | User-defined methods of the data storage class |
| include/objects/homologene/HG_CommentarySet_.hpp [code] | Data storage class |
| include/objects/homologene/HG_Domain.hpp [code] | User-defined methods of the data storage class |
| include/objects/homologene/HG_Domain_.hpp [code] | Data storage class |
| include/objects/homologene/HG_Entry.hpp [code] | |
| include/objects/homologene/HG_Entry_.hpp [code] | Data storage class |
| include/objects/homologene/HG_EntrySet.hpp [code] | User-defined methods of the data storage class |
| include/objects/homologene/HG_EntrySet_.hpp [code] | Data storage class |
| include/objects/homologene/HG_Gene.hpp [code] | |
| include/objects/homologene/HG_Gene_.hpp [code] | Data storage class |
| include/objects/homologene/HG_Link.hpp [code] | User-defined methods of the data storage class |
| include/objects/homologene/HG_Link_.hpp [code] | Data storage class |
| include/objects/homologene/HG_Node.hpp [code] | User-defined methods of the data storage class |
| include/objects/homologene/HG_Node_.hpp [code] | Data storage class |
| include/objects/homologene/HG_Node_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/homologene/HG_Node_id_.hpp [code] | Data storage class |
| include/objects/homologene/HG_Stats.hpp [code] | User-defined methods of the data storage class |
| include/objects/homologene/HG_Stats_.hpp [code] | Data storage class |
| include/objects/homologene/homologene__.hpp [code] | |
| include/objects/homologene/homologene_doxygen.h [code] | |
| include/objects/homologene/HomoloGene_module.hpp [code] | |
| include/objects/id1/Entry_complexities.hpp [code] | User-defined methods of the data storage class |
| include/objects/id1/Entry_complexities_.hpp [code] | Data storage class |
| include/objects/id1/id1__.hpp [code] | |
| include/objects/id1/id1_client.hpp [code] | |
| include/objects/id1/id1_client_.hpp [code] | Data storage class |
| include/objects/id1/id1_doxygen.h [code] | |
| include/objects/id1/ID1blob_info.hpp [code] | User-defined methods of the data storage class |
| include/objects/id1/ID1blob_info_.hpp [code] | Data storage class |
| include/objects/id1/ID1Seq_hist.hpp [code] | User-defined methods of the data storage class |
| include/objects/id1/ID1Seq_hist_.hpp [code] | Data storage class |
| include/objects/id1/ID1SeqEntry_info.hpp [code] | User-defined methods of the data storage class |
| include/objects/id1/ID1SeqEntry_info_.hpp [code] | Data storage class |
| include/objects/id1/ID1server_back.hpp [code] | |
| include/objects/id1/ID1server_back_.hpp [code] | Data storage class |
| include/objects/id1/ID1server_debug.hpp [code] | User-defined methods of the data storage class |
| include/objects/id1/ID1server_debug_.hpp [code] | Data storage class |
| include/objects/id1/ID1server_maxcomplex.hpp [code] | User-defined methods of the data storage class |
| include/objects/id1/ID1server_maxcomplex_.hpp [code] | Data storage class |
| include/objects/id1/ID1server_request.hpp [code] | User-defined methods of the data storage class |
| include/objects/id1/ID1server_request_.hpp [code] | Data storage class |
| include/objects/id1/NCBI_ID1Access_module.hpp [code] | |
| include/objects/id2/id2__.hpp [code] | |
| include/objects/id2/ID2_Blob_Id.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Blob_Id_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Blob_Seq_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Blob_Seq_id_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Blob_Seq_ids.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Blob_Seq_ids_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Blob_State.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Blob_State_.hpp [code] | Data storage class |
| include/objects/id2/id2_client.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/id2_client_.hpp [code] | Data storage class |
| include/objects/id2/id2_doxygen.h [code] | |
| include/objects/id2/ID2_Error.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Error_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Get_Blob_Details.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Get_Blob_Details_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Param.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Param_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Params.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Params_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Reply_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Reply_Data.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Reply_Data_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Reply_Get_Blob.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Reply_Get_Blob_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Reply_Get_Blob_Id.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Reply_Get_Blob_Id_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Reply_Get_Blob_Seq_ids.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Reply_Get_Blob_Seq_ids_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Reply_Get_Package.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Reply_Get_Package_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Reply_Get_Seq_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Reply_Get_Seq_id_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Reply_ReGet_Blob.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Reply_ReGet_Blob_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Request.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Request_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Request_Get_Blob_Id.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Request_Get_Blob_Id_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Request_Get_Blob_Info.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Request_Get_Blob_Info_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Request_Get_Packages.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Request_Get_Packages_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Request_Get_Seq_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Request_Get_Seq_id_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Request_Packet.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Request_Packet_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Request_ReGet_Blob.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Request_ReGet_Blob_.hpp [code] | Data storage class |
| include/objects/id2/ID2_Seq_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2_Seq_id_.hpp [code] | Data storage class |
| include/objects/id2/ID2S_Reply_Get_Chunk.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2S_Reply_Get_Chunk_.hpp [code] | Data storage class |
| include/objects/id2/ID2S_Reply_Get_Split_Info.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2S_Reply_Get_Split_Info_.hpp [code] | Data storage class |
| include/objects/id2/ID2S_Request_Get_Chunks.hpp [code] | User-defined methods of the data storage class |
| include/objects/id2/ID2S_Request_Get_Chunks_.hpp [code] | Data storage class |
| include/objects/id2/NCBI_ID2Access_module.hpp [code] | |
| include/objects/insdseq/INSD_INSDSeq_module.hpp [code] | |
| include/objects/insdseq/INSDAuthor.hpp [code] | User-defined methods of the data storage class |
| include/objects/insdseq/INSDAuthor_.hpp [code] | Data storage class |
| include/objects/insdseq/INSDFeature.hpp [code] | User-defined methods of the data storage class |
| include/objects/insdseq/INSDFeature_.hpp [code] | Data storage class |
| include/objects/insdseq/INSDInterval.hpp [code] | User-defined methods of the data storage class |
| include/objects/insdseq/INSDInterval_.hpp [code] | Data storage class |
| include/objects/insdseq/INSDKeyword.hpp [code] | User-defined methods of the data storage class |
| include/objects/insdseq/INSDKeyword_.hpp [code] | Data storage class |
| include/objects/insdseq/INSDQualifier.hpp [code] | User-defined methods of the data storage class |
| include/objects/insdseq/INSDQualifier_.hpp [code] | Data storage class |
| include/objects/insdseq/INSDReference.hpp [code] | User-defined methods of the data storage class |
| include/objects/insdseq/INSDReference_.hpp [code] | Data storage class |
| include/objects/insdseq/INSDSecondary_accn.hpp [code] | User-defined methods of the data storage class |
| include/objects/insdseq/INSDSecondary_accn_.hpp [code] | Data storage class |
| include/objects/insdseq/INSDSeq.hpp [code] | User-defined methods of the data storage class |
| include/objects/insdseq/INSDSeq_.hpp [code] | Data storage class |
| include/objects/insdseq/insdseq__.hpp [code] | |
| include/objects/insdseq/insdseq_doxygen.h [code] | |
| include/objects/insdseq/INSDSeqid.hpp [code] | User-defined methods of the data storage class |
| include/objects/insdseq/INSDSeqid_.hpp [code] | Data storage class |
| include/objects/insdseq/INSDSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/insdseq/INSDSet_.hpp [code] | Data storage class |
| include/objects/insdseq/INSDTag.hpp [code] | User-defined methods of the data storage class |
| include/objects/insdseq/INSDTag_.hpp [code] | Data storage class |
| include/objects/insdseq/INSDTagNames.hpp [code] | User-defined methods of the data storage class |
| include/objects/insdseq/INSDTagNames_.hpp [code] | Data storage class |
| include/objects/insdseq/INSDTags.hpp [code] | User-defined methods of the data storage class |
| include/objects/insdseq/INSDTags_.hpp [code] | Data storage class |
| include/objects/insdseq/INSDTagset.hpp [code] | User-defined methods of the data storage class |
| include/objects/insdseq/INSDTagset_.hpp [code] | Data storage class |
| include/objects/insdseq/INSDTagsetRules.hpp [code] | User-defined methods of the data storage class |
| include/objects/insdseq/INSDTagsetRules_.hpp [code] | Data storage class |
| include/objects/insdseq/INSDTagsetRuleSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/insdseq/INSDTagsetRuleSet_.hpp [code] | Data storage class |
| include/objects/insdseq/INSDXref.hpp [code] | User-defined methods of the data storage class |
| include/objects/insdseq/INSDXref_.hpp [code] | Data storage class |
| include/objects/medlars/medlars__.hpp [code] | |
| include/objects/medlars/medlars_doxygen.h [code] | |
| include/objects/medlars/Medlars_entry.hpp [code] | User-defined methods of the data storage class |
| include/objects/medlars/Medlars_entry_.hpp [code] | Data storage class |
| include/objects/medlars/Medlars_record.hpp [code] | User-defined methods of the data storage class |
| include/objects/medlars/Medlars_record_.hpp [code] | Data storage class |
| include/objects/medlars/NCBI_Medlars_module.hpp [code] | |
| include/objects/medline/DocRef.hpp [code] | User-defined methods of the data storage class |
| include/objects/medline/DocRef_.hpp [code] | Data storage class |
| include/objects/medline/medline__.hpp [code] | |
| include/objects/medline/medline_doxygen.h [code] | |
| include/objects/medline/Medline_entry.hpp [code] | |
| include/objects/medline/Medline_entry_.hpp [code] | Data storage class |
| include/objects/medline/Medline_field.hpp [code] | User-defined methods of the data storage class |
| include/objects/medline/Medline_field_.hpp [code] | Data storage class |
| include/objects/medline/Medline_mesh.hpp [code] | User-defined methods of the data storage class |
| include/objects/medline/Medline_mesh_.hpp [code] | Data storage class |
| include/objects/medline/Medline_qual.hpp [code] | User-defined methods of the data storage class |
| include/objects/medline/Medline_qual_.hpp [code] | Data storage class |
| include/objects/medline/Medline_rn.hpp [code] | User-defined methods of the data storage class |
| include/objects/medline/Medline_rn_.hpp [code] | Data storage class |
| include/objects/medline/Medline_si.hpp [code] | User-defined methods of the data storage class |
| include/objects/medline/Medline_si_.hpp [code] | Data storage class |
| include/objects/medline/NCBI_Medline_module.hpp [code] | |
| include/objects/mim/mim__.hpp [code] | |
| include/objects/mim/Mim_allelic_variant.hpp [code] | User-defined methods of the data storage class |
| include/objects/mim/Mim_allelic_variant_.hpp [code] | Data storage class |
| include/objects/mim/Mim_author.hpp [code] | User-defined methods of the data storage class |
| include/objects/mim/Mim_author_.hpp [code] | Data storage class |
| include/objects/mim/Mim_cit.hpp [code] | User-defined methods of the data storage class |
| include/objects/mim/Mim_cit_.hpp [code] | Data storage class |
| include/objects/mim/Mim_date.hpp [code] | User-defined methods of the data storage class |
| include/objects/mim/Mim_date_.hpp [code] | Data storage class |
| include/objects/mim/mim_doxygen.h [code] | |
| include/objects/mim/Mim_edit_item.hpp [code] | User-defined methods of the data storage class |
| include/objects/mim/Mim_edit_item_.hpp [code] | Data storage class |
| include/objects/mim/Mim_entries.hpp [code] | User-defined methods of the data storage class |
| include/objects/mim/Mim_entries_.hpp [code] | Data storage class |
| include/objects/mim/Mim_entry.hpp [code] | User-defined methods of the data storage class |
| include/objects/mim/Mim_entry_.hpp [code] | Data storage class |
| include/objects/mim/Mim_index_term.hpp [code] | User-defined methods of the data storage class |
| include/objects/mim/Mim_index_term_.hpp [code] | Data storage class |
| include/objects/mim/Mim_link.hpp [code] | User-defined methods of the data storage class |
| include/objects/mim/Mim_link_.hpp [code] | Data storage class |
| include/objects/mim/Mim_page.hpp [code] | User-defined methods of the data storage class |
| include/objects/mim/Mim_page_.hpp [code] | Data storage class |
| include/objects/mim/Mim_reference.hpp [code] | User-defined methods of the data storage class |
| include/objects/mim/Mim_reference_.hpp [code] | Data storage class |
| include/objects/mim/Mim_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/mim/Mim_set_.hpp [code] | Data storage class |
| include/objects/mim/Mim_text.hpp [code] | User-defined methods of the data storage class |
| include/objects/mim/Mim_text_.hpp [code] | Data storage class |
| include/objects/mim/NCBI_Mim_module.hpp [code] | |
| include/objects/misc/error_codes.hpp [code] | |
| include/objects/misc/sequence_macros.hpp [code] | |
| include/objects/mla/Error_val.hpp [code] | |
| include/objects/mla/Error_val_.hpp [code] | Data storage class |
| include/objects/mla/mla__.hpp [code] | |
| include/objects/mla/Mla_back.hpp [code] | User-defined methods of the data storage class |
| include/objects/mla/Mla_back_.hpp [code] | Data storage class |
| include/objects/mla/mla_client.hpp [code] | |
| include/objects/mla/mla_client_.hpp [code] | Data storage class |
| include/objects/mla/mla_doxygen.h [code] | |
| include/objects/mla/Mla_request.hpp [code] | User-defined methods of the data storage class |
| include/objects/mla/Mla_request_.hpp [code] | Data storage class |
| include/objects/mla/NCBI_MedArchive_module.hpp [code] | |
| include/objects/mla/Title_msg.hpp [code] | User-defined methods of the data storage class |
| include/objects/mla/Title_msg_.hpp [code] | Data storage class |
| include/objects/mla/Title_msg_list.hpp [code] | User-defined methods of the data storage class |
| include/objects/mla/Title_msg_list_.hpp [code] | Data storage class |
| include/objects/mla/Title_type.hpp [code] | User-defined methods of the data storage class |
| include/objects/mla/Title_type_.hpp [code] | Data storage class |
| include/objects/mmdb1/Atom.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Atom_.hpp [code] | Data storage class |
| include/objects/mmdb1/Atom_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Atom_id_.hpp [code] | Data storage class |
| include/objects/mmdb1/Atom_pntr.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Atom_pntr_.hpp [code] | Data storage class |
| include/objects/mmdb1/Atom_pntr_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Atom_pntr_set_.hpp [code] | Data storage class |
| include/objects/mmdb1/Biomol_descr.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Biomol_descr_.hpp [code] | Data storage class |
| include/objects/mmdb1/Biost_resid_graph_set_pntr.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Biost_resid_graph_set_pntr_.hpp [code] | Data storage class |
| include/objects/mmdb1/Biostruc.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Biostruc_.hpp [code] | Data storage class |
| include/objects/mmdb1/Biostruc_annot_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Biostruc_annot_set_.hpp [code] | Data storage class |
| include/objects/mmdb1/Biostruc_descr.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Biostruc_descr_.hpp [code] | Data storage class |
| include/objects/mmdb1/Biostruc_graph.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Biostruc_graph_.hpp [code] | Data storage class |
| include/objects/mmdb1/Biostruc_graph_pntr.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Biostruc_graph_pntr_.hpp [code] | Data storage class |
| include/objects/mmdb1/Biostruc_history.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Biostruc_history_.hpp [code] | Data storage class |
| include/objects/mmdb1/Biostruc_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Biostruc_id_.hpp [code] | Data storage class |
| include/objects/mmdb1/Biostruc_replace.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Biostruc_replace_.hpp [code] | Data storage class |
| include/objects/mmdb1/Biostruc_residue_graph_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Biostruc_residue_graph_set_.hpp [code] | Data storage class |
| include/objects/mmdb1/Biostruc_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Biostruc_set_.hpp [code] | Data storage class |
| include/objects/mmdb1/Biostruc_source.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Biostruc_source_.hpp [code] | Data storage class |
| include/objects/mmdb1/Chiral_center.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Chiral_center_.hpp [code] | Data storage class |
| include/objects/mmdb1/Inter_residue_bond.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Inter_residue_bond_.hpp [code] | Data storage class |
| include/objects/mmdb1/Intra_residue_bond.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Intra_residue_bond_.hpp [code] | Data storage class |
| include/objects/mmdb1/mmdb1__.hpp [code] | |
| include/objects/mmdb1/mmdb1_doxygen.h [code] | |
| include/objects/mmdb1/MMDB_Chemical_graph_module.hpp [code] | |
| include/objects/mmdb1/Mmdb_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Mmdb_id_.hpp [code] | Data storage class |
| include/objects/mmdb1/MMDB_module.hpp [code] | |
| include/objects/mmdb1/Molecule_graph.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Molecule_graph_.hpp [code] | Data storage class |
| include/objects/mmdb1/Molecule_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Molecule_id_.hpp [code] | Data storage class |
| include/objects/mmdb1/PCSubstance_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/PCSubstance_id_.hpp [code] | Data storage class |
| include/objects/mmdb1/Residue.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Residue_.hpp [code] | Data storage class |
| include/objects/mmdb1/Residue_graph.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Residue_graph_.hpp [code] | Data storage class |
| include/objects/mmdb1/Residue_graph_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Residue_graph_id_.hpp [code] | Data storage class |
| include/objects/mmdb1/Residue_graph_pntr.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Residue_graph_pntr_.hpp [code] | Data storage class |
| include/objects/mmdb1/Residue_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb1/Residue_id_.hpp [code] | Data storage class |
| include/objects/mmdb2/Alternate_conformation_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/Alternate_conformation_id_.hpp [code] | Data storage class |
| include/objects/mmdb2/Alternate_conformation_ids.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/Alternate_conformation_ids_.hpp [code] | Data storage class |
| include/objects/mmdb2/Anisotro_temperatu_factors.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/Anisotro_temperatu_factors_.hpp [code] | Data storage class |
| include/objects/mmdb2/Atomic_coordinates.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/Atomic_coordinates_.hpp [code] | Data storage class |
| include/objects/mmdb2/Atomic_occupancies.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/Atomic_occupancies_.hpp [code] | Data storage class |
| include/objects/mmdb2/Atomic_temperature_factors.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/Atomic_temperature_factors_.hpp [code] | Data storage class |
| include/objects/mmdb2/Biostruc_model.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/Biostruc_model_.hpp [code] | Data storage class |
| include/objects/mmdb2/Conformation_ensemble.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/Conformation_ensemble_.hpp [code] | Data storage class |
| include/objects/mmdb2/Coordinates.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/Coordinates_.hpp [code] | Data storage class |
| include/objects/mmdb2/Density_coordinates.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/Density_coordinates_.hpp [code] | Data storage class |
| include/objects/mmdb2/Isotropi_temperatu_factors.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/Isotropi_temperatu_factors_.hpp [code] | Data storage class |
| include/objects/mmdb2/mmdb2__.hpp [code] | |
| include/objects/mmdb2/mmdb2_doxygen.h [code] | |
| include/objects/mmdb2/MMDB_Structural_model_module.hpp [code] | |
| include/objects/mmdb2/Model_coordinate_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/Model_coordinate_set_.hpp [code] | Data storage class |
| include/objects/mmdb2/Model_coordinate_set_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/Model_coordinate_set_id_.hpp [code] | Data storage class |
| include/objects/mmdb2/Model_descr.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/Model_descr_.hpp [code] | Data storage class |
| include/objects/mmdb2/Model_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/Model_id_.hpp [code] | Data storage class |
| include/objects/mmdb2/Model_space.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/Model_space_.hpp [code] | Data storage class |
| include/objects/mmdb2/Model_space_points.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/Model_space_points_.hpp [code] | Data storage class |
| include/objects/mmdb2/Model_type.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/Model_type_.hpp [code] | Data storage class |
| include/objects/mmdb2/Reference_frame.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/Reference_frame_.hpp [code] | Data storage class |
| include/objects/mmdb2/Surface_coordinates.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/Surface_coordinates_.hpp [code] | Data storage class |
| include/objects/mmdb2/T_mesh.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/T_mesh_.hpp [code] | Data storage class |
| include/objects/mmdb2/Triangles.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb2/Triangles_.hpp [code] | Data storage class |
| include/objects/mmdb3/Align_stats.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Align_stats_.hpp [code] | Data storage class |
| include/objects/mmdb3/Atom_pntrs.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Atom_pntrs_.hpp [code] | Data storage class |
| include/objects/mmdb3/Biostruc_feature.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Biostruc_feature_.hpp [code] | Data storage class |
| include/objects/mmdb3/Biostruc_feature_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Biostruc_feature_id_.hpp [code] | Data storage class |
| include/objects/mmdb3/Biostruc_feature_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Biostruc_feature_set_.hpp [code] | Data storage class |
| include/objects/mmdb3/Biostruc_feature_set_descr.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Biostruc_feature_set_descr_.hpp [code] | Data storage class |
| include/objects/mmdb3/Biostruc_feature_set_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Biostruc_feature_set_id_.hpp [code] | Data storage class |
| include/objects/mmdb3/Biostruc_script.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Biostruc_script_.hpp [code] | Data storage class |
| include/objects/mmdb3/Biostruc_script_step.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Biostruc_script_step_.hpp [code] | Data storage class |
| include/objects/mmdb3/Brick.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Brick_.hpp [code] | Data storage class |
| include/objects/mmdb3/Camera.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Camera_.hpp [code] | Data storage class |
| include/objects/mmdb3/Chem_graph_alignment.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Chem_graph_alignment_.hpp [code] | Data storage class |
| include/objects/mmdb3/Chem_graph_pntrs.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Chem_graph_pntrs_.hpp [code] | Data storage class |
| include/objects/mmdb3/Color_prop.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Color_prop_.hpp [code] | Data storage class |
| include/objects/mmdb3/Cone.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Cone_.hpp [code] | Data storage class |
| include/objects/mmdb3/Cylinder.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Cylinder_.hpp [code] | Data storage class |
| include/objects/mmdb3/GL_matrix.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/GL_matrix_.hpp [code] | Data storage class |
| include/objects/mmdb3/mmdb3__.hpp [code] | |
| include/objects/mmdb3/mmdb3_doxygen.h [code] | |
| include/objects/mmdb3/MMDB_Features_module.hpp [code] | |
| include/objects/mmdb3/Model_space_point.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Model_space_point_.hpp [code] | Data storage class |
| include/objects/mmdb3/Molecule_pntrs.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Molecule_pntrs_.hpp [code] | Data storage class |
| include/objects/mmdb3/Move.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Move_.hpp [code] | Data storage class |
| include/objects/mmdb3/Other_feature.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Other_feature_.hpp [code] | Data storage class |
| include/objects/mmdb3/RealValue.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/RealValue_.hpp [code] | Data storage class |
| include/objects/mmdb3/Region_boundary.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Region_boundary_.hpp [code] | Data storage class |
| include/objects/mmdb3/Region_coordinates.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Region_coordinates_.hpp [code] | Data storage class |
| include/objects/mmdb3/Region_pntrs.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Region_pntrs_.hpp [code] | Data storage class |
| include/objects/mmdb3/Region_similarity.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Region_similarity_.hpp [code] | Data storage class |
| include/objects/mmdb3/Render_prop.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Render_prop_.hpp [code] | Data storage class |
| include/objects/mmdb3/Residue_explicit_pntrs.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Residue_explicit_pntrs_.hpp [code] | Data storage class |
| include/objects/mmdb3/Residue_interval_pntr.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Residue_interval_pntr_.hpp [code] | Data storage class |
| include/objects/mmdb3/Residue_pntrs.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Residue_pntrs_.hpp [code] | Data storage class |
| include/objects/mmdb3/Rot_matrix.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Rot_matrix_.hpp [code] | Data storage class |
| include/objects/mmdb3/Sphere.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Sphere_.hpp [code] | Data storage class |
| include/objects/mmdb3/Step_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Step_id_.hpp [code] | Data storage class |
| include/objects/mmdb3/Trans_matrix.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Trans_matrix_.hpp [code] | Data storage class |
| include/objects/mmdb3/Transform.hpp [code] | User-defined methods of the data storage class |
| include/objects/mmdb3/Transform_.hpp [code] | Data storage class |
| include/objects/ncbimime/Biostruc_align.hpp [code] | User-defined methods of the data storage class |
| include/objects/ncbimime/Biostruc_align_.hpp [code] | Data storage class |
| include/objects/ncbimime/Biostruc_align_seq.hpp [code] | User-defined methods of the data storage class |
| include/objects/ncbimime/Biostruc_align_seq_.hpp [code] | Data storage class |
| include/objects/ncbimime/Biostruc_seq.hpp [code] | User-defined methods of the data storage class |
| include/objects/ncbimime/Biostruc_seq_.hpp [code] | Data storage class |
| include/objects/ncbimime/Biostruc_seqs.hpp [code] | User-defined methods of the data storage class |
| include/objects/ncbimime/Biostruc_seqs_.hpp [code] | Data storage class |
| include/objects/ncbimime/Biostruc_seqs_aligns_cdd.hpp [code] | User-defined methods of the data storage class |
| include/objects/ncbimime/Biostruc_seqs_aligns_cdd_.hpp [code] | Data storage class |
| include/objects/ncbimime/Bundle_seqs_aligns.hpp [code] | User-defined methods of the data storage class |
| include/objects/ncbimime/Bundle_seqs_aligns_.hpp [code] | Data storage class |
| include/objects/ncbimime/Entrez_general.hpp [code] | User-defined methods of the data storage class |
| include/objects/ncbimime/Entrez_general_.hpp [code] | Data storage class |
| include/objects/ncbimime/Entrez_style.hpp [code] | User-defined methods of the data storage class |
| include/objects/ncbimime/Entrez_style_.hpp [code] | Data storage class |
| include/objects/ncbimime/Ncbi_mime_asn1.hpp [code] | User-defined methods of the data storage class |
| include/objects/ncbimime/Ncbi_mime_asn1_.hpp [code] | Data storage class |
| include/objects/ncbimime/NCBI_Mime_module.hpp [code] | |
| include/objects/ncbimime/ncbimime__.hpp [code] | |
| include/objects/ncbimime/ncbimime_doxygen.h [code] | |
| include/objects/objprt/NCBI_ObjPrt_module.hpp [code] | |
| include/objects/objprt/objprt__.hpp [code] | |
| include/objects/objprt/objprt_doxygen.h [code] | |
| include/objects/objprt/PrintForm.hpp [code] | User-defined methods of the data storage class |
| include/objects/objprt/PrintForm_.hpp [code] | Data storage class |
| include/objects/objprt/PrintFormat.hpp [code] | User-defined methods of the data storage class |
| include/objects/objprt/PrintFormat_.hpp [code] | Data storage class |
| include/objects/objprt/PrintFormBlock.hpp [code] | User-defined methods of the data storage class |
| include/objects/objprt/PrintFormBlock_.hpp [code] | Data storage class |
| include/objects/objprt/PrintFormBoolean.hpp [code] | User-defined methods of the data storage class |
| include/objects/objprt/PrintFormBoolean_.hpp [code] | Data storage class |
| include/objects/objprt/PrintFormEnum.hpp [code] | User-defined methods of the data storage class |
| include/objects/objprt/PrintFormEnum_.hpp [code] | Data storage class |
| include/objects/objprt/PrintFormText.hpp [code] | User-defined methods of the data storage class |
| include/objects/objprt/PrintFormText_.hpp [code] | Data storage class |
| include/objects/objprt/PrintTemplate.hpp [code] | User-defined methods of the data storage class |
| include/objects/objprt/PrintTemplate_.hpp [code] | Data storage class |
| include/objects/objprt/PrintTemplateSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/objprt/PrintTemplateSet_.hpp [code] | Data storage class |
| include/objects/objprt/TemplateName.hpp [code] | User-defined methods of the data storage class |
| include/objects/objprt/TemplateName_.hpp [code] | Data storage class |
| include/objects/objprt/UserFormat.hpp [code] | User-defined methods of the data storage class |
| include/objects/objprt/UserFormat_.hpp [code] | Data storage class |
| include/objects/omssa/MSBioseq.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSBioseq_.hpp [code] | Data storage class |
| include/objects/omssa/MSBioseqSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSBioseqSet_.hpp [code] | Data storage class |
| include/objects/omssa/MSCalcCharge.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSCalcCharge_.hpp [code] | Data storage class |
| include/objects/omssa/MSCalcPlusOne.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSCalcPlusOne_.hpp [code] | Data storage class |
| include/objects/omssa/MSChargeHandle.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSChargeHandle_.hpp [code] | Data storage class |
| include/objects/omssa/MSEnzymes.hpp [code] | |
| include/objects/omssa/MSEnzymes_.hpp [code] | Data storage class |
| include/objects/omssa/MSHitError.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSHitError_.hpp [code] | Data storage class |
| include/objects/omssa/MSHits.hpp [code] | |
| include/objects/omssa/MSHits_.hpp [code] | Data storage class |
| include/objects/omssa/MSHitSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSHitSet_.hpp [code] | Data storage class |
| include/objects/omssa/MSImmonium.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSImmonium_.hpp [code] | Data storage class |
| include/objects/omssa/MSInFile.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSInFile_.hpp [code] | Data storage class |
| include/objects/omssa/MSIon.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSIon_.hpp [code] | Data storage class |
| include/objects/omssa/MSIonAnnot.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSIonAnnot_.hpp [code] | Data storage class |
| include/objects/omssa/MSIonIsotopicType.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSIonIsotopicType_.hpp [code] | Data storage class |
| include/objects/omssa/MSIonNeutralLoss.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSIonNeutralLoss_.hpp [code] | Data storage class |
| include/objects/omssa/MSIonType.hpp [code] | |
| include/objects/omssa/MSIonType_.hpp [code] | Data storage class |
| include/objects/omssa/MSIterativeSettings.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSIterativeSettings_.hpp [code] | Data storage class |
| include/objects/omssa/MSLibrarySettings.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSLibrarySettings_.hpp [code] | Data storage class |
| include/objects/omssa/MSMassSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSMassSet_.hpp [code] | Data storage class |
| include/objects/omssa/MSMod.hpp [code] | |
| include/objects/omssa/MSMod_.hpp [code] | Data storage class |
| include/objects/omssa/MSModHit.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSModHit_.hpp [code] | Data storage class |
| include/objects/omssa/MSModSpec.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSModSpec_.hpp [code] | Data storage class |
| include/objects/omssa/MSModSpecSet.hpp [code] | |
| include/objects/omssa/MSModSpecSet_.hpp [code] | Data storage class |
| include/objects/omssa/MSModType.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSModType_.hpp [code] | Data storage class |
| include/objects/omssa/MSMZHit.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSMZHit_.hpp [code] | Data storage class |
| include/objects/omssa/MSOutFile.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSOutFile_.hpp [code] | Data storage class |
| include/objects/omssa/MSPepHit.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSPepHit_.hpp [code] | Data storage class |
| include/objects/omssa/MSRequest.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSRequest_.hpp [code] | Data storage class |
| include/objects/omssa/MSResponse.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSResponse_.hpp [code] | Data storage class |
| include/objects/omssa/MSResponseError.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSResponseError_.hpp [code] | Data storage class |
| include/objects/omssa/MSScoreSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSScoreSet_.hpp [code] | Data storage class |
| include/objects/omssa/MSSearch.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSSearch_.hpp [code] | Data storage class |
| include/objects/omssa/MSSearchSettings.hpp [code] | |
| include/objects/omssa/MSSearchSettings_.hpp [code] | Data storage class |
| include/objects/omssa/MSSearchSettingsSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSSearchSettingsSet_.hpp [code] | Data storage class |
| include/objects/omssa/MSSearchType.hpp [code] | |
| include/objects/omssa/MSSearchType_.hpp [code] | Data storage class |
| include/objects/omssa/MSSerialDataFormat.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSSerialDataFormat_.hpp [code] | Data storage class |
| include/objects/omssa/MSSpectrum.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSSpectrum_.hpp [code] | Data storage class |
| include/objects/omssa/MSSpectrumFileType.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSSpectrumFileType_.hpp [code] | Data storage class |
| include/objects/omssa/MSSpectrumset.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSSpectrumset_.hpp [code] | Data storage class |
| include/objects/omssa/MSUserAnnot.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSUserAnnot_.hpp [code] | Data storage class |
| include/objects/omssa/MSZdependence.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/MSZdependence_.hpp [code] | Data storage class |
| include/objects/omssa/NameValue.hpp [code] | User-defined methods of the data storage class |
| include/objects/omssa/NameValue_.hpp [code] | Data storage class |
| include/objects/omssa/omssa__.hpp [code] | |
| include/objects/omssa/omssa_doxygen.h [code] | |
| include/objects/omssa/OMSSA_module.hpp [code] | |
| include/objects/pcassay/NCBI_PCAssay_module.hpp [code] | |
| include/objects/pcassay/PC_AnnotatedXRef.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcassay/PC_AnnotatedXRef_.hpp [code] | Data storage class |
| include/objects/pcassay/PC_AssayContainer.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcassay/PC_AssayContainer_.hpp [code] | Data storage class |
| include/objects/pcassay/PC_AssayData.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcassay/PC_AssayData_.hpp [code] | Data storage class |
| include/objects/pcassay/PC_AssayDescription.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcassay/PC_AssayDescription_.hpp [code] | Data storage class |
| include/objects/pcassay/PC_AssayDRAttr.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcassay/PC_AssayDRAttr_.hpp [code] | Data storage class |
| include/objects/pcassay/PC_AssayPanel.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcassay/PC_AssayPanel_.hpp [code] | Data storage class |
| include/objects/pcassay/PC_AssayPanelMember.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcassay/PC_AssayPanelMember_.hpp [code] | Data storage class |
| include/objects/pcassay/PC_AssayPanelTestResult.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcassay/PC_AssayPanelTestResult_.hpp [code] | Data storage class |
| include/objects/pcassay/PC_AssayResults.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcassay/PC_AssayResults_.hpp [code] | Data storage class |
| include/objects/pcassay/PC_AssaySubmit.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcassay/PC_AssaySubmit_.hpp [code] | Data storage class |
| include/objects/pcassay/PC_AssayTargetInfo.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcassay/PC_AssayTargetInfo_.hpp [code] | Data storage class |
| include/objects/pcassay/PC_ConcentrationAttr.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcassay/PC_ConcentrationAttr_.hpp [code] | Data storage class |
| include/objects/pcassay/PC_IntegerMinMax.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcassay/PC_IntegerMinMax_.hpp [code] | Data storage class |
| include/objects/pcassay/PC_RealMinMax.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcassay/PC_RealMinMax_.hpp [code] | Data storage class |
| include/objects/pcassay/PC_ResultType.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcassay/PC_ResultType_.hpp [code] | Data storage class |
| include/objects/pcassay/pcassay__.hpp [code] | |
| include/objects/pcassay/pcassay_doxygen.h [code] | |
| include/objects/pcsubstance/NCBI_PCSubstance_module.hpp [code] | |
| include/objects/pcsubstance/PC_AtomInt.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_AtomInt_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_AtomRadical.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_AtomRadical_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_Atoms.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_Atoms_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_AtomSource.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_AtomSource_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_AtomString.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_AtomString_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_BondAnnotation.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_BondAnnotation_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_Bonds.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_Bonds_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_BondType.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_BondType_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_Compound.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_Compound_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_Compounds.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_Compounds_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_CompoundType.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_CompoundType_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_Conformer.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_Conformer_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_Conformers.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_Conformers_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_Coordinates.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_Coordinates_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_CoordinateType.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_CoordinateType_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_Count.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_Count_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_DBTracking.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_DBTracking_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_DrawAnnotations.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_DrawAnnotations_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_Element.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_Element_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_ID.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_ID_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_InfoData.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_InfoData_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_MMDBSource.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_MMDBSource_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_Source.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_Source_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_StereoCenter.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_StereoCenter_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_StereoGroup.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_StereoGroup_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_StereoOctahedral.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_StereoOctahedral_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_StereoPentagonalBiPyram.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_StereoPentagonalBiPyram_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_StereoPlanar.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_StereoPlanar_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_StereoSquarePlanar.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_StereoSquarePlanar_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_StereoTetrahedral.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_StereoTetrahedral_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_StereoTrigonalBiPyramid.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_StereoTrigonalBiPyramid_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_StereoTShape.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_StereoTShape_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_Substance.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_Substance_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_Substances.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_Substances_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_Urn.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_Urn_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_UrnDataType.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_UrnDataType_.hpp [code] | Data storage class |
| include/objects/pcsubstance/PC_XRefData.hpp [code] | User-defined methods of the data storage class |
| include/objects/pcsubstance/PC_XRefData_.hpp [code] | Data storage class |
| include/objects/pcsubstance/pcsubstance__.hpp [code] | |
| include/objects/pcsubstance/pcsubstance_doxygen.h [code] | |
| include/objects/proj/NCBI_Project_module.hpp [code] | |
| include/objects/proj/proj__.hpp [code] | |
| include/objects/proj/proj_doxygen.h [code] | |
| include/objects/proj/Projdesc.hpp [code] | User-defined methods of the data storage class |
| include/objects/proj/Projdesc_.hpp [code] | Data storage class |
| include/objects/proj/Project.hpp [code] | User-defined methods of the data storage class |
| include/objects/proj/Project_.hpp [code] | Data storage class |
| include/objects/proj/Project_descr.hpp [code] | User-defined methods of the data storage class |
| include/objects/proj/Project_descr_.hpp [code] | Data storage class |
| include/objects/proj/Project_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/proj/Project_id_.hpp [code] | Data storage class |
| include/objects/proj/Project_item.hpp [code] | User-defined methods of the data storage class |
| include/objects/proj/Project_item_.hpp [code] | Data storage class |
| include/objects/pub/NCBI_Pub_module.hpp [code] | |
| include/objects/pub/Pub.hpp [code] | |
| include/objects/pub/Pub_.hpp [code] | Data storage class |
| include/objects/pub/pub__.hpp [code] | |
| include/objects/pub/pub_doxygen.h [code] | |
| include/objects/pub/Pub_equiv.hpp [code] | |
| include/objects/pub/Pub_equiv_.hpp [code] | Data storage class |
| include/objects/pub/Pub_set.hpp [code] | |
| include/objects/pub/Pub_set_.hpp [code] | Data storage class |
| include/objects/pubmed/NCBI_PubMed_module.hpp [code] | |
| include/objects/pubmed/pubmed__.hpp [code] | |
| include/objects/pubmed/pubmed_doxygen.h [code] | |
| include/objects/pubmed/Pubmed_entry.hpp [code] | User-defined methods of the data storage class |
| include/objects/pubmed/Pubmed_entry_.hpp [code] | Data storage class |
| include/objects/pubmed/Pubmed_url.hpp [code] | User-defined methods of the data storage class |
| include/objects/pubmed/Pubmed_url_.hpp [code] | Data storage class |
| include/objects/remap/NCBI_Remap_module.hpp [code] | |
| include/objects/remap/remap__.hpp [code] | |
| include/objects/remap/remap_client.hpp [code] | |
| include/objects/remap/remap_client_.hpp [code] | Data storage class |
| include/objects/remap/Remap_db_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/remap/Remap_db_id_.hpp [code] | Data storage class |
| include/objects/remap/remap_doxygen.h [code] | |
| include/objects/remap/Remap_dt.hpp [code] | User-defined methods of the data storage class |
| include/objects/remap/Remap_dt_.hpp [code] | Data storage class |
| include/objects/remap/Remap_query.hpp [code] | User-defined methods of the data storage class |
| include/objects/remap/Remap_query_.hpp [code] | Data storage class |
| include/objects/remap/Remap_reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/remap/Remap_reply_.hpp [code] | Data storage class |
| include/objects/remap/Remap_request.hpp [code] | User-defined methods of the data storage class |
| include/objects/remap/Remap_request_.hpp [code] | Data storage class |
| include/objects/remap/Remap_result.hpp [code] | User-defined methods of the data storage class |
| include/objects/remap/Remap_result_.hpp [code] | Data storage class |
| include/objects/remap/RMReply.hpp [code] | User-defined methods of the data storage class |
| include/objects/remap/RMReply_.hpp [code] | Data storage class |
| include/objects/remap/RMRequest.hpp [code] | User-defined methods of the data storage class |
| include/objects/remap/RMRequest_.hpp [code] | Data storage class |
| include/objects/scoremat/BlockProperty.hpp [code] | User-defined methods of the data storage class |
| include/objects/scoremat/BlockProperty_.hpp [code] | Data storage class |
| include/objects/scoremat/CoreBlock.hpp [code] | User-defined methods of the data storage class |
| include/objects/scoremat/CoreBlock_.hpp [code] | Data storage class |
| include/objects/scoremat/CoreDef.hpp [code] | User-defined methods of the data storage class |
| include/objects/scoremat/CoreDef_.hpp [code] | Data storage class |
| include/objects/scoremat/FormatRpsDbParameters.hpp [code] | User-defined methods of the data storage class |
| include/objects/scoremat/FormatRpsDbParameters_.hpp [code] | Data storage class |
| include/objects/scoremat/LoopConstraint.hpp [code] | User-defined methods of the data storage class |
| include/objects/scoremat/LoopConstraint_.hpp [code] | Data storage class |
| include/objects/scoremat/NCBI_ScoreMat_module.hpp [code] | |
| include/objects/scoremat/Pssm.hpp [code] | User-defined methods of the data storage class |
| include/objects/scoremat/Pssm_.hpp [code] | Data storage class |
| include/objects/scoremat/PssmFinalData.hpp [code] | User-defined methods of the data storage class |
| include/objects/scoremat/PssmFinalData_.hpp [code] | Data storage class |
| include/objects/scoremat/PssmIntermediateData.hpp [code] | User-defined methods of the data storage class |
| include/objects/scoremat/PssmIntermediateData_.hpp [code] | Data storage class |
| include/objects/scoremat/PssmParameters.hpp [code] | User-defined methods of the data storage class |
| include/objects/scoremat/PssmParameters_.hpp [code] | Data storage class |
| include/objects/scoremat/PssmWithParameters.hpp [code] | User-defined methods of the data storage class |
| include/objects/scoremat/PssmWithParameters_.hpp [code] | Data storage class |
| include/objects/scoremat/scoremat__.hpp [code] | |
| include/objects/scoremat/scoremat_doxygen.h [code] | |
| include/objects/seq/Align_def.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/Align_def_.hpp [code] | Data storage class |
| include/objects/seq/Annot_descr.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/Annot_descr_.hpp [code] | Data storage class |
| include/objects/seq/Annot_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/Annot_id_.hpp [code] | Data storage class |
| include/objects/seq/annot_mapper_exception.hpp [code] | |
| include/objects/seq/Annotdesc.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/Annotdesc_.hpp [code] | Data storage class |
| include/objects/seq/Bioseq.hpp [code] | |
| include/objects/seq/Bioseq_.hpp [code] | Data storage class |
| include/objects/seq/Delta_ext.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/Delta_ext_.hpp [code] | Data storage class |
| include/objects/seq/Delta_seq.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/Delta_seq_.hpp [code] | Data storage class |
| include/objects/seq/GIBB_method.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/GIBB_method_.hpp [code] | Data storage class |
| include/objects/seq/GIBB_mod.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/GIBB_mod_.hpp [code] | Data storage class |
| include/objects/seq/GIBB_mol.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/GIBB_mol_.hpp [code] | Data storage class |
| include/objects/seq/Heterogen.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/Heterogen_.hpp [code] | Data storage class |
| include/objects/seq/IUPACaa.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/IUPACaa_.hpp [code] | Data storage class |
| include/objects/seq/IUPACna.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/IUPACna_.hpp [code] | Data storage class |
| include/objects/seq/Map_ext.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/Map_ext_.hpp [code] | Data storage class |
| include/objects/seq/MolInfo.hpp [code] | |
| include/objects/seq/MolInfo_.hpp [code] | Data storage class |
| include/objects/seq/NCBI2na.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/NCBI2na_.hpp [code] | Data storage class |
| include/objects/seq/NCBI4na.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/NCBI4na_.hpp [code] | Data storage class |
| include/objects/seq/NCBI8aa.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/NCBI8aa_.hpp [code] | Data storage class |
| include/objects/seq/NCBI8na.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/NCBI8na_.hpp [code] | Data storage class |
| include/objects/seq/NCBI_Sequence_module.hpp [code] | |
| include/objects/seq/NCBIeaa.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/NCBIeaa_.hpp [code] | Data storage class |
| include/objects/seq/NCBIpaa.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/NCBIpaa_.hpp [code] | Data storage class |
| include/objects/seq/NCBIpna.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/NCBIpna_.hpp [code] | Data storage class |
| include/objects/seq/NCBIstdaa.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/NCBIstdaa_.hpp [code] | Data storage class |
| include/objects/seq/Num_cont.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/Num_cont_.hpp [code] | Data storage class |
| include/objects/seq/Num_enum.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/Num_enum_.hpp [code] | Data storage class |
| include/objects/seq/Num_real.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/Num_real_.hpp [code] | Data storage class |
| include/objects/seq/Num_ref.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/Num_ref_.hpp [code] | Data storage class |
| include/objects/seq/Numbering.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/Numbering_.hpp [code] | Data storage class |
| include/objects/seq/Pubdesc.hpp [code] | |
| include/objects/seq/Pubdesc_.hpp [code] | Data storage class |
| include/objects/seq/Ref_ext.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/Ref_ext_.hpp [code] | Data storage class |
| include/objects/seq/Seg_ext.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/Seg_ext_.hpp [code] | Data storage class |
| include/objects/seq/seq__.hpp [code] | |
| include/objects/seq/seq_align_mapper_base.hpp [code] | |
| include/objects/seq/Seq_annot.hpp [code] | |
| include/objects/seq/Seq_annot_.hpp [code] | Data storage class |
| include/objects/seq/Seq_data.hpp [code] | |
| include/objects/seq/Seq_data_.hpp [code] | Data storage class |
| include/objects/seq/Seq_descr.hpp [code] | |
| include/objects/seq/Seq_descr_.hpp [code] | Data storage class |
| include/objects/seq/seq_doxygen.h [code] | |
| include/objects/seq/Seq_ext.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/Seq_ext_.hpp [code] | Data storage class |
| include/objects/seq/Seq_gap.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/Seq_gap_.hpp [code] | Data storage class |
| include/objects/seq/Seq_hist.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/Seq_hist_.hpp [code] | Data storage class |
| include/objects/seq/Seq_hist_rec.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/Seq_hist_rec_.hpp [code] | Data storage class |
| include/objects/seq/seq_id_handle.hpp [code] | |
| include/objects/seq/seq_id_mapper.hpp [code] | |
| include/objects/seq/Seq_inst.hpp [code] | |
| include/objects/seq/Seq_inst_.hpp [code] | Data storage class |
| include/objects/seq/Seq_literal.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/Seq_literal_.hpp [code] | Data storage class |
| include/objects/seq/seq_loc_mapper_base.hpp [code] | |
| include/objects/seq/Seqdesc.hpp [code] | |
| include/objects/seq/Seqdesc_.hpp [code] | Data storage class |
| include/objects/seq/seqlocinfo.hpp [code] | |
| include/objects/seq/seqport_util.hpp [code] | |
| include/objects/seq/Textannot_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/seq/Textannot_id_.hpp [code] | Data storage class |
| include/objects/seqalign/Dense_diag.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqalign/Dense_diag_.hpp [code] | Data storage class |
| include/objects/seqalign/Dense_seg.hpp [code] | |
| include/objects/seqalign/Dense_seg_.hpp [code] | Data storage class |
| include/objects/seqalign/NCBI_Seqalign_module.hpp [code] | |
| include/objects/seqalign/Packed_seg.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqalign/Packed_seg_.hpp [code] | Data storage class |
| include/objects/seqalign/Product_pos.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqalign/Product_pos_.hpp [code] | Data storage class |
| include/objects/seqalign/Prot_pos.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqalign/Prot_pos_.hpp [code] | Data storage class |
| include/objects/seqalign/Score.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqalign/Score_.hpp [code] | Data storage class |
| include/objects/seqalign/Score_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqalign/Score_set_.hpp [code] | Data storage class |
| include/objects/seqalign/Seq_align.hpp [code] | |
| include/objects/seqalign/Seq_align_.hpp [code] | Data storage class |
| include/objects/seqalign/Seq_align_set.hpp [code] | |
| include/objects/seqalign/Seq_align_set_.hpp [code] | Data storage class |
| include/objects/seqalign/seqalign__.hpp [code] | |
| include/objects/seqalign/seqalign_doxygen.h [code] | |
| include/objects/seqalign/seqalign_exception.hpp [code] | |
| include/objects/seqalign/Sparse_align.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqalign/Sparse_align_.hpp [code] | Data storage class |
| include/objects/seqalign/Sparse_seg.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqalign/Sparse_seg_.hpp [code] | Data storage class |
| include/objects/seqalign/Sparse_seg_ext.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqalign/Sparse_seg_ext_.hpp [code] | Data storage class |
| include/objects/seqalign/Splice_site.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqalign/Splice_site_.hpp [code] | Data storage class |
| include/objects/seqalign/Spliced_exon.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqalign/Spliced_exon_.hpp [code] | Data storage class |
| include/objects/seqalign/Spliced_exon_chunk.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqalign/Spliced_exon_chunk_.hpp [code] | Data storage class |
| include/objects/seqalign/Spliced_seg.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqalign/Spliced_seg_.hpp [code] | Data storage class |
| include/objects/seqalign/Spliced_seg_modifier.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqalign/Spliced_seg_modifier_.hpp [code] | Data storage class |
| include/objects/seqalign/Std_seg.hpp [code] | |
| include/objects/seqalign/Std_seg_.hpp [code] | Data storage class |
| include/objects/seqblock/EMBL_block.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqblock/EMBL_block_.hpp [code] | Data storage class |
| include/objects/seqblock/EMBL_dbname.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqblock/EMBL_dbname_.hpp [code] | Data storage class |
| include/objects/seqblock/EMBL_General_module.hpp [code] | |
| include/objects/seqblock/EMBL_xref.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqblock/EMBL_xref_.hpp [code] | Data storage class |
| include/objects/seqblock/GB_block.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqblock/GB_block_.hpp [code] | Data storage class |
| include/objects/seqblock/GenBank_General_module.hpp [code] | |
| include/objects/seqblock/PDB_block.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqblock/PDB_block_.hpp [code] | Data storage class |
| include/objects/seqblock/PDB_General_module.hpp [code] | |
| include/objects/seqblock/PDB_replace.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqblock/PDB_replace_.hpp [code] | Data storage class |
| include/objects/seqblock/PIR_block.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqblock/PIR_block_.hpp [code] | Data storage class |
| include/objects/seqblock/PIR_General_module.hpp [code] | |
| include/objects/seqblock/PRF_block.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqblock/PRF_block_.hpp [code] | Data storage class |
| include/objects/seqblock/PRF_ExtraSrc.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqblock/PRF_ExtraSrc_.hpp [code] | Data storage class |
| include/objects/seqblock/PRF_General_module.hpp [code] | |
| include/objects/seqblock/seqblock__.hpp [code] | |
| include/objects/seqblock/seqblock_doxygen.h [code] | |
| include/objects/seqblock/SP_block.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqblock/SP_block_.hpp [code] | Data storage class |
| include/objects/seqblock/SP_General_module.hpp [code] | |
| include/objects/seqcode/NCBI_SeqCode_module.hpp [code] | |
| include/objects/seqcode/Seq_code_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqcode/Seq_code_set_.hpp [code] | Data storage class |
| include/objects/seqcode/Seq_code_table.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqcode/Seq_code_table_.hpp [code] | Data storage class |
| include/objects/seqcode/Seq_code_type.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqcode/Seq_code_type_.hpp [code] | Data storage class |
| include/objects/seqcode/Seq_map_table.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqcode/Seq_map_table_.hpp [code] | Data storage class |
| include/objects/seqcode/seqcode__.hpp [code] | |
| include/objects/seqcode/seqcode_doxygen.h [code] | |
| include/objects/seqedit/NCBI_SeqEdit_module.hpp [code] | |
| include/objects/seqedit/seqedit__.hpp [code] | |
| include/objects/seqedit/SeqEdit_Cmd.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_.hpp [code] | Data storage class |
| include/objects/seqedit/SeqEdit_Cmd_AddAnnot.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_AddAnnot_.hpp [code] | Data storage class |
| include/objects/seqedit/SeqEdit_Cmd_AddDesc.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_AddDesc_.hpp [code] | Data storage class |
| include/objects/seqedit/SeqEdit_Cmd_AddDescr.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_AddDescr_.hpp [code] | Data storage class |
| include/objects/seqedit/SeqEdit_Cmd_AddId.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_AddId_.hpp [code] | Data storage class |
| include/objects/seqedit/SeqEdit_Cmd_AttachAnnot.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_AttachAnnot_.hpp [code] | Data storage class |
| include/objects/seqedit/SeqEdit_Cmd_AttachSeq.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_AttachSeq_.hpp [code] | Data storage class |
| include/objects/seqedit/SeqEdit_Cmd_AttachSeqEntry.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_AttachSeqEntry_.hpp [code] | Data storage class |
| include/objects/seqedit/SeqEdit_Cmd_AttachSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_AttachSet_.hpp [code] | Data storage class |
| include/objects/seqedit/SeqEdit_Cmd_ChangeSeqAttr.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_ChangeSeqAttr_.hpp [code] | Data storage class |
| include/objects/seqedit/SeqEdit_Cmd_ChangeSetAttr.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_ChangeSetAttr_.hpp [code] | Data storage class |
| include/objects/seqedit/SeqEdit_Cmd_RemoveAnnot.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_RemoveAnnot_.hpp [code] | Data storage class |
| include/objects/seqedit/SeqEdit_Cmd_RemoveDesc.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_RemoveDesc_.hpp [code] | Data storage class |
| include/objects/seqedit/SeqEdit_Cmd_RemoveId.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_RemoveId_.hpp [code] | Data storage class |
| include/objects/seqedit/SeqEdit_Cmd_RemoveSeqEntry.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_RemoveSeqEntry_.hpp [code] | Data storage class |
| include/objects/seqedit/SeqEdit_Cmd_ReplaceAnnot.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_ReplaceAnnot_.hpp [code] | Data storage class |
| include/objects/seqedit/SeqEdit_Cmd_ResetDescr.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_ResetDescr_.hpp [code] | Data storage class |
| include/objects/seqedit/SeqEdit_Cmd_ResetIds.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_ResetIds_.hpp [code] | Data storage class |
| include/objects/seqedit/SeqEdit_Cmd_ResetSeqAttr.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_ResetSeqAttr_.hpp [code] | Data storage class |
| include/objects/seqedit/SeqEdit_Cmd_ResetSeqEntry.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_ResetSeqEntry_.hpp [code] | Data storage class |
| include/objects/seqedit/SeqEdit_Cmd_ResetSetAttr.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_ResetSetAttr_.hpp [code] | Data storage class |
| include/objects/seqedit/SeqEdit_Cmd_SetDescr.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Cmd_SetDescr_.hpp [code] | Data storage class |
| include/objects/seqedit/seqedit_doxygen.h [code] | |
| include/objects/seqedit/SeqEdit_Id.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqedit/SeqEdit_Id_.hpp [code] | Data storage class |
| include/objects/seqfeat/BinomialOrgName.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/BinomialOrgName_.hpp [code] | Data storage class |
| include/objects/seqfeat/BioSource.hpp [code] | |
| include/objects/seqfeat/BioSource_.hpp [code] | Data storage class |
| include/objects/seqfeat/Cdregion.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/Cdregion_.hpp [code] | Data storage class |
| include/objects/seqfeat/Clone_ref.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/Clone_ref_.hpp [code] | Data storage class |
| include/objects/seqfeat/Clone_seq.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/Clone_seq_.hpp [code] | Data storage class |
| include/objects/seqfeat/Clone_seq_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/Clone_seq_set_.hpp [code] | Data storage class |
| include/objects/seqfeat/Code_break.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/Code_break_.hpp [code] | Data storage class |
| include/objects/seqfeat/Feat_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/Feat_id_.hpp [code] | Data storage class |
| include/objects/seqfeat/Gb_qual.hpp [code] | |
| include/objects/seqfeat/Gb_qual_.hpp [code] | Data storage class |
| include/objects/seqfeat/Gene_nomenclature.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/Gene_nomenclature_.hpp [code] | Data storage class |
| include/objects/seqfeat/Gene_ref.hpp [code] | |
| include/objects/seqfeat/Gene_ref_.hpp [code] | Data storage class |
| include/objects/seqfeat/Genetic_code.hpp [code] | |
| include/objects/seqfeat/Genetic_code_.hpp [code] | Data storage class |
| include/objects/seqfeat/Genetic_code_table.hpp [code] | |
| include/objects/seqfeat/Genetic_code_table_.hpp [code] | Data storage class |
| include/objects/seqfeat/Imp_feat.hpp [code] | |
| include/objects/seqfeat/Imp_feat_.hpp [code] | Data storage class |
| include/objects/seqfeat/ISeq_feat.hpp [code] | |
| include/objects/seqfeat/MultiOrgName.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/MultiOrgName_.hpp [code] | Data storage class |
| include/objects/seqfeat/NCBI_BioSource_module.hpp [code] | |
| include/objects/seqfeat/NCBI_Gene_module.hpp [code] | |
| include/objects/seqfeat/NCBI_Organism_module.hpp [code] | |
| include/objects/seqfeat/NCBI_Protein_module.hpp [code] | |
| include/objects/seqfeat/NCBI_RNA_module.hpp [code] | |
| include/objects/seqfeat/NCBI_Rsite_module.hpp [code] | |
| include/objects/seqfeat/NCBI_Seqfeat_module.hpp [code] | |
| include/objects/seqfeat/NCBI_TxInit_module.hpp [code] | |
| include/objects/seqfeat/Org_ref.hpp [code] | |
| include/objects/seqfeat/Org_ref_.hpp [code] | Data storage class |
| include/objects/seqfeat/OrgMod.hpp [code] | |
| include/objects/seqfeat/OrgMod_.hpp [code] | Data storage class |
| include/objects/seqfeat/OrgName.hpp [code] | |
| include/objects/seqfeat/OrgName_.hpp [code] | Data storage class |
| include/objects/seqfeat/PartialOrgName.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/PartialOrgName_.hpp [code] | Data storage class |
| include/objects/seqfeat/PCRPrimer.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/PCRPrimer_.hpp [code] | Data storage class |
| include/objects/seqfeat/PCRPrimerName.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/PCRPrimerName_.hpp [code] | Data storage class |
| include/objects/seqfeat/PCRPrimerSeq.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/PCRPrimerSeq_.hpp [code] | Data storage class |
| include/objects/seqfeat/PCRPrimerSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/PCRPrimerSet_.hpp [code] | Data storage class |
| include/objects/seqfeat/PCRReaction.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/PCRReaction_.hpp [code] | Data storage class |
| include/objects/seqfeat/PCRReactionSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/PCRReactionSet_.hpp [code] | Data storage class |
| include/objects/seqfeat/Prot_ref.hpp [code] | |
| include/objects/seqfeat/Prot_ref_.hpp [code] | Data storage class |
| include/objects/seqfeat/RNA_gen.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/RNA_gen_.hpp [code] | Data storage class |
| include/objects/seqfeat/RNA_qual.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/RNA_qual_.hpp [code] | Data storage class |
| include/objects/seqfeat/RNA_qual_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/RNA_qual_set_.hpp [code] | Data storage class |
| include/objects/seqfeat/RNA_ref.hpp [code] | |
| include/objects/seqfeat/RNA_ref_.hpp [code] | Data storage class |
| include/objects/seqfeat/Rsite_ref.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/Rsite_ref_.hpp [code] | Data storage class |
| include/objects/seqfeat/Seq_feat.hpp [code] | |
| include/objects/seqfeat/Seq_feat_.hpp [code] | Data storage class |
| include/objects/seqfeat/seqfeat__.hpp [code] | |
| include/objects/seqfeat/seqfeat_doxygen.h [code] | |
| include/objects/seqfeat/SeqFeatData.hpp [code] | |
| include/objects/seqfeat/SeqFeatData_.hpp [code] | Data storage class |
| include/objects/seqfeat/SeqFeatXref.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/SeqFeatXref_.hpp [code] | Data storage class |
| include/objects/seqfeat/SubSource.hpp [code] | |
| include/objects/seqfeat/SubSource_.hpp [code] | Data storage class |
| include/objects/seqfeat/TaxElement.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/TaxElement_.hpp [code] | Data storage class |
| include/objects/seqfeat/Trna_ext.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/Trna_ext_.hpp [code] | Data storage class |
| include/objects/seqfeat/Tx_evidence.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/Tx_evidence_.hpp [code] | Data storage class |
| include/objects/seqfeat/Txinit.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqfeat/Txinit_.hpp [code] | Data storage class |
| include/objects/seqloc/Giimport_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqloc/Giimport_id_.hpp [code] | Data storage class |
| include/objects/seqloc/Na_strand.hpp [code] | |
| include/objects/seqloc/Na_strand_.hpp [code] | Data storage class |
| include/objects/seqloc/NCBI_Seqloc_module.hpp [code] | |
| include/objects/seqloc/Packed_seqint.hpp [code] | |
| include/objects/seqloc/Packed_seqint_.hpp [code] | Data storage class |
| include/objects/seqloc/Packed_seqpnt.hpp [code] | |
| include/objects/seqloc/Packed_seqpnt_.hpp [code] | Data storage class |
| include/objects/seqloc/Patent_seq_id.hpp [code] | |
| include/objects/seqloc/Patent_seq_id_.hpp [code] | Data storage class |
| include/objects/seqloc/PDB_mol_id.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqloc/PDB_mol_id_.hpp [code] | Data storage class |
| include/objects/seqloc/PDB_seq_id.hpp [code] | |
| include/objects/seqloc/PDB_seq_id_.hpp [code] | Data storage class |
| include/objects/seqloc/Seq_bond.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqloc/Seq_bond_.hpp [code] | Data storage class |
| include/objects/seqloc/Seq_id.hpp [code] | |
| include/objects/seqloc/Seq_id_.hpp [code] | Data storage class |
| include/objects/seqloc/Seq_interval.hpp [code] | |
| include/objects/seqloc/Seq_interval_.hpp [code] | Data storage class |
| include/objects/seqloc/Seq_loc.hpp [code] | |
| include/objects/seqloc/Seq_loc_.hpp [code] | Data storage class |
| include/objects/seqloc/Seq_loc_equiv.hpp [code] | |
| include/objects/seqloc/Seq_loc_equiv_.hpp [code] | Data storage class |
| include/objects/seqloc/Seq_loc_mix.hpp [code] | |
| include/objects/seqloc/Seq_loc_mix_.hpp [code] | Data storage class |
| include/objects/seqloc/Seq_point.hpp [code] | |
| include/objects/seqloc/Seq_point_.hpp [code] | Data storage class |
| include/objects/seqloc/seqloc__.hpp [code] | |
| include/objects/seqloc/seqloc_doxygen.h [code] | |
| include/objects/seqloc/Textseq_id.hpp [code] | |
| include/objects/seqloc/Textseq_id_.hpp [code] | Data storage class |
| include/objects/seqres/Byte_graph.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqres/Byte_graph_.hpp [code] | Data storage class |
| include/objects/seqres/Int_graph.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqres/Int_graph_.hpp [code] | Data storage class |
| include/objects/seqres/NCBI_Seqres_module.hpp [code] | |
| include/objects/seqres/Real_graph.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqres/Real_graph_.hpp [code] | Data storage class |
| include/objects/seqres/Seq_graph.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqres/Seq_graph_.hpp [code] | Data storage class |
| include/objects/seqres/seqres__.hpp [code] | |
| include/objects/seqres/seqres_doxygen.h [code] | |
| include/objects/seqset/Bioseq_set.hpp [code] | |
| include/objects/seqset/Bioseq_set_.hpp [code] | Data storage class |
| include/objects/seqset/gb_release_file.hpp [code] | |
| include/objects/seqset/NCBI_Seqset_module.hpp [code] | |
| include/objects/seqset/Seq_entry.hpp [code] | |
| include/objects/seqset/Seq_entry_.hpp [code] | Data storage class |
| include/objects/seqset/seqset__.hpp [code] | |
| include/objects/seqset/seqset_doxygen.h [code] | |
| include/objects/seqset/seqset_exception.hpp [code] | |
| include/objects/seqsplit/ID2S_Bioseq_Ids.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Bioseq_Ids_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Bioseq_Info.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Bioseq_Info_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Bioseq_place_Info.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Bioseq_place_Info_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Bioseq_set_Ids.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Bioseq_set_Ids_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Bioseqs_Info.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Bioseqs_Info_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Chunk.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Chunk_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Chunk_Content.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Chunk_Content_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Chunk_Data.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Chunk_Data_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Chunk_Id.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Chunk_Id_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Chunk_Info.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Chunk_Info_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Feat_type_Info.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Feat_type_Info_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Gi_Interval.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Gi_Interval_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Gi_Ints.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Gi_Ints_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Gi_Range.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Gi_Range_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Interval.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Interval_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Seq_annot_Info.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Seq_annot_Info_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Seq_annot_place_Info.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Seq_annot_place_Info_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Seq_assembly_Info.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Seq_assembly_Info_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Seq_data_Info.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Seq_data_Info_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Seq_descr_Info.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Seq_descr_Info_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Seq_feat_Ids_Info.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Seq_feat_Ids_Info_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Seq_id_Interval.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Seq_id_Interval_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Seq_id_Ints.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Seq_id_Ints_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Seq_loc.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Seq_loc_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Seq_map_Info.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Seq_map_Info_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Sequence_Piece.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Sequence_Piece_.hpp [code] | Data storage class |
| include/objects/seqsplit/ID2S_Split_Info.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqsplit/ID2S_Split_Info_.hpp [code] | Data storage class |
| include/objects/seqsplit/NCBI_Seq_split_module.hpp [code] | |
| include/objects/seqsplit/seqsplit__.hpp [code] | |
| include/objects/seqsplit/seqsplit_doxygen.h [code] | |
| include/objects/seqtable/CommonBytes_table.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqtable/CommonBytes_table_.hpp [code] | Data storage class |
| include/objects/seqtable/CommonString_table.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqtable/CommonString_table_.hpp [code] | Data storage class |
| include/objects/seqtable/NCBI_SeqTable_module.hpp [code] | |
| include/objects/seqtable/Seq_table.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqtable/Seq_table_.hpp [code] | Data storage class |
| include/objects/seqtable/seqtable__.hpp [code] | |
| include/objects/seqtable/SeqTable_column.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqtable/SeqTable_column_.hpp [code] | Data storage class |
| include/objects/seqtable/SeqTable_column_info.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqtable/SeqTable_column_info_.hpp [code] | Data storage class |
| include/objects/seqtable/seqtable_doxygen.h [code] | |
| include/objects/seqtable/SeqTable_multi_data.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqtable/SeqTable_multi_data_.hpp [code] | Data storage class |
| include/objects/seqtable/SeqTable_single_data.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqtable/SeqTable_single_data_.hpp [code] | Data storage class |
| include/objects/seqtable/SeqTable_sparse_index.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqtable/SeqTable_sparse_index_.hpp [code] | Data storage class |
| include/objects/seqtest/NCBI_SeqTest_module.hpp [code] | |
| include/objects/seqtest/Seq_test_result.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqtest/Seq_test_result_.hpp [code] | Data storage class |
| include/objects/seqtest/Seq_test_result_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqtest/Seq_test_result_set_.hpp [code] | Data storage class |
| include/objects/seqtest/seqtest__.hpp [code] | |
| include/objects/seqtest/seqtest_doxygen.h [code] | |
| include/objects/seqtest/SeqTestResults.hpp [code] | User-defined methods of the data storage class |
| include/objects/seqtest/SeqTestResults_.hpp [code] | Data storage class |
| include/objects/submit/Contact_info.hpp [code] | User-defined methods of the data storage class |
| include/objects/submit/Contact_info_.hpp [code] | Data storage class |
| include/objects/submit/NCBI_Submit_module.hpp [code] | |
| include/objects/submit/Seq_submit.hpp [code] | User-defined methods of the data storage class |
| include/objects/submit/Seq_submit_.hpp [code] | Data storage class |
| include/objects/submit/submit__.hpp [code] | |
| include/objects/submit/Submit_block.hpp [code] | User-defined methods of the data storage class |
| include/objects/submit/Submit_block_.hpp [code] | Data storage class |
| include/objects/submit/submit_doxygen.h [code] | |
| include/objects/taxon1/NCBI_Taxon1_module.hpp [code] | |
| include/objects/taxon1/taxon1.hpp [code] | |
| include/objects/taxon1/taxon1__.hpp [code] | |
| include/objects/taxon1/Taxon1_data.hpp [code] | User-defined methods of the data storage class |
| include/objects/taxon1/Taxon1_data_.hpp [code] | Data storage class |
| include/objects/taxon1/taxon1_doxygen.h [code] | |
| include/objects/taxon1/Taxon1_error.hpp [code] | |
| include/objects/taxon1/Taxon1_error_.hpp [code] | Data storage class |
| include/objects/taxon1/Taxon1_info.hpp [code] | User-defined methods of the data storage class |
| include/objects/taxon1/Taxon1_info_.hpp [code] | Data storage class |
| include/objects/taxon1/Taxon1_name.hpp [code] | User-defined methods of the data storage class |
| include/objects/taxon1/Taxon1_name_.hpp [code] | Data storage class |
| include/objects/taxon1/Taxon1_req.hpp [code] | User-defined methods of the data storage class |
| include/objects/taxon1/Taxon1_req_.hpp [code] | Data storage class |
| include/objects/taxon1/Taxon1_resp.hpp [code] | User-defined methods of the data storage class |
| include/objects/taxon1/Taxon1_resp_.hpp [code] | Data storage class |
| include/objects/taxon1/Taxon2_data.hpp [code] | User-defined methods of the data storage class |
| include/objects/taxon1/Taxon2_data_.hpp [code] | Data storage class |
| include/objects/taxon3/NCBI_Taxon3_module.hpp [code] | |
| include/objects/taxon3/T3Data.hpp [code] | User-defined methods of the data storage class |
| include/objects/taxon3/T3Data_.hpp [code] | Data storage class |
| include/objects/taxon3/T3Error.hpp [code] | User-defined methods of the data storage class |
| include/objects/taxon3/T3Error_.hpp [code] | Data storage class |
| include/objects/taxon3/T3RefreshFlags.hpp [code] | User-defined methods of the data storage class |
| include/objects/taxon3/T3RefreshFlags_.hpp [code] | Data storage class |
| include/objects/taxon3/T3Reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/taxon3/T3Reply_.hpp [code] | Data storage class |
| include/objects/taxon3/T3Request.hpp [code] | User-defined methods of the data storage class |
| include/objects/taxon3/T3Request_.hpp [code] | Data storage class |
| include/objects/taxon3/T3StatusFlags.hpp [code] | User-defined methods of the data storage class |
| include/objects/taxon3/T3StatusFlags_.hpp [code] | Data storage class |
| include/objects/taxon3/taxon3.hpp [code] | |
| include/objects/taxon3/taxon3__.hpp [code] | |
| include/objects/taxon3/taxon3_doxygen.h [code] | |
| include/objects/taxon3/Taxon3_reply.hpp [code] | User-defined methods of the data storage class |
| include/objects/taxon3/Taxon3_reply_.hpp [code] | Data storage class |
| include/objects/taxon3/Taxon3_request.hpp [code] | User-defined methods of the data storage class |
| include/objects/taxon3/Taxon3_request_.hpp [code] | Data storage class |
| include/objects/tinyseq/NCBI_TSeq_module.hpp [code] | |
| include/objects/tinyseq/tinyseq__.hpp [code] | |
| include/objects/tinyseq/tinyseq_doxygen.h [code] | |
| include/objects/tinyseq/TSeq.hpp [code] | User-defined methods of the data storage class |
| include/objects/tinyseq/TSeq_.hpp [code] | Data storage class |
| include/objects/tinyseq/TSeqSet.hpp [code] | User-defined methods of the data storage class |
| include/objects/tinyseq/TSeqSet_.hpp [code] | Data storage class |
| include/objects/valerr/NCBI_ValErrors_module.hpp [code] | |
| include/objects/valerr/valerr__.hpp [code] | |
| include/objects/valerr/valerr_doxygen.h [code] | |
| include/objects/valerr/ValidErrItem.hpp [code] | User-defined methods of the data storage class |
| include/objects/valerr/ValidErrItem_.hpp [code] | Data storage class |
| include/objects/valerr/ValidError.hpp [code] | User-defined methods of the data storage class |
| include/objects/valerr/ValidError_.hpp [code] | Data storage class |
| include/objects/valid/Comment_rule.hpp [code] | User-defined methods of the data storage class |
| include/objects/valid/Comment_rule_.hpp [code] | Data storage class |
| include/objects/valid/Comment_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/valid/Comment_set_.hpp [code] | Data storage class |
| include/objects/valid/Dependent_field_rule.hpp [code] | User-defined methods of the data storage class |
| include/objects/valid/Dependent_field_rule_.hpp [code] | Data storage class |
| include/objects/valid/Dependent_field_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/valid/Dependent_field_set_.hpp [code] | Data storage class |
| include/objects/valid/Field_rule.hpp [code] | User-defined methods of the data storage class |
| include/objects/valid/Field_rule_.hpp [code] | Data storage class |
| include/objects/valid/Field_set.hpp [code] | User-defined methods of the data storage class |
| include/objects/valid/Field_set_.hpp [code] | Data storage class |
| include/objects/valid/NCBI_Structured_comment_validation_module.hpp [code] | |
| include/objects/valid/Severity_level.hpp [code] | User-defined methods of the data storage class |
| include/objects/valid/Severity_level_.hpp [code] | Data storage class |
| include/objects/valid/valid__.hpp [code] | |
| include/objects/valid/valid_doxygen.h [code] | |
| include/objmgr/align_ci.hpp [code] | |
| include/objmgr/annot_ci.hpp [code] | |
| include/objmgr/annot_name.hpp [code] | |
| include/objmgr/annot_selector.hpp [code] | |
| include/objmgr/annot_type_selector.hpp [code] | |
| include/objmgr/annot_types_ci.hpp [code] | |
| include/objmgr/bio_object_id.hpp [code] | |
| include/objmgr/bioseq_ci.hpp [code] | |
| include/objmgr/bioseq_handle.hpp [code] | |
| include/objmgr/bioseq_set_handle.hpp [code] | |
| include/objmgr/blob_id.hpp [code] | |
| include/objmgr/data_loader.hpp [code] | |
| include/objmgr/data_loader_factory.hpp [code] | |
| include/objmgr/edit_saver.hpp [code] | |
| include/objmgr/edits_db_engine.hpp [code] | |
| include/objmgr/edits_db_saver.hpp [code] | |
| include/objmgr/error_codes.hpp [code] | |
| include/objmgr/feat_ci.hpp [code] | |
| include/objmgr/gbloader.hpp [code] | |
| include/objmgr/graph_ci.hpp [code] | |
| include/objmgr/mapped_feat.hpp [code] | |
| include/objmgr/object_manager.hpp [code] | The Object manager core |
| include/objmgr/objmgr_exception.hpp [code] | |
| include/objmgr/objmgr_version.hpp [code] | |
| include/objmgr/prefetch.hpp [code] | |
| include/objmgr/prefetch_actions.hpp [code] | |
| include/objmgr/prefetch_manager.hpp [code] | |
| include/objmgr/reader.hpp [code] | |
| include/objmgr/reader_id1.hpp [code] | |
| include/objmgr/scope.hpp [code] | |
| include/objmgr/scope_transaction.hpp [code] | |
| include/objmgr/seq_align_handle.hpp [code] | |
| include/objmgr/seq_annot_ci.hpp [code] | |
| include/objmgr/seq_annot_handle.hpp [code] | |
| include/objmgr/seq_descr_ci.hpp [code] | |
| include/objmgr/seq_entry_ci.hpp [code] | |
| include/objmgr/seq_entry_handle.hpp [code] | |
| include/objmgr/seq_feat_handle.hpp [code] | |
| include/objmgr/seq_graph_handle.hpp [code] | |
| include/objmgr/seq_loc_mapper.hpp [code] | |
| include/objmgr/seq_map.hpp [code] | |
| include/objmgr/seq_map_ci.hpp [code] | |
| include/objmgr/seq_map_switch.hpp [code] | |
| include/objmgr/seq_vector.hpp [code] | |
| include/objmgr/seq_vector_ci.hpp [code] | |
| include/objmgr/seqdesc_ci.hpp [code] | |
| include/objmgr/table_field.hpp [code] | |
| include/objmgr/tse_handle.hpp [code] | |
| include/objmgr/unsupp_editsaver.hpp [code] | |
| include/objmgr/impl/annot_collector.hpp [code] | |
| include/objmgr/impl/annot_finder.hpp [code] | |
| include/objmgr/impl/annot_object.hpp [code] | |
| include/objmgr/impl/annot_object_index.hpp [code] | |
| include/objmgr/impl/annot_type_index.hpp [code] | |
| include/objmgr/impl/bioseq_base_info.hpp [code] | |
| include/objmgr/impl/bioseq_edit_commands.hpp [code] | |
| include/objmgr/impl/bioseq_info.hpp [code] | |
| include/objmgr/impl/bioseq_set_edit_commands.hpp [code] | |
| include/objmgr/impl/bioseq_set_info.hpp [code] | |
| include/objmgr/impl/data_source.hpp [code] | |
| include/objmgr/impl/edit_commands_impl.hpp [code] | |
| include/objmgr/impl/handle_range.hpp [code] | |
| include/objmgr/impl/handle_range_map.hpp [code] | |
| include/objmgr/impl/heap_scope.hpp [code] | |
| include/objmgr/impl/mutex_pool.hpp [code] | |
| include/objmgr/impl/prefetch_impl.hpp [code] | |
| include/objmgr/impl/prefetch_manager_impl.hpp [code] | |
| include/objmgr/impl/priority.hpp [code] | |
| include/objmgr/impl/scope_impl.hpp [code] | |
| include/objmgr/impl/scope_info.hpp [code] | |
| include/objmgr/impl/scope_transaction_impl.hpp [code] | |
| include/objmgr/impl/seq_align_mapper.hpp [code] | |
| include/objmgr/impl/seq_annot_edit_commands.hpp [code] | |
| include/objmgr/impl/seq_annot_info.hpp [code] | |
| include/objmgr/impl/seq_entry_edit_commands.hpp [code] | |
| include/objmgr/impl/seq_entry_info.hpp [code] | |
| include/objmgr/impl/seq_loc_cvt.hpp [code] | |
| include/objmgr/impl/seq_table_info.hpp [code] | |
| include/objmgr/impl/seq_table_setter.hpp [code] | |
| include/objmgr/impl/seq_table_setters.hpp [code] | |
| include/objmgr/impl/seq_vector_cvt.hpp [code] | |
| include/objmgr/impl/seq_vector_cvt_gcc_i386.hpp [code] | |
| include/objmgr/impl/seq_vector_cvt_gen.hpp [code] | |
| include/objmgr/impl/snp_annot_info.hpp [code] | |
| include/objmgr/impl/snp_info.hpp [code] | |
| include/objmgr/impl/synonyms.hpp [code] | |
| include/objmgr/impl/tse_assigner.hpp [code] | |
| include/objmgr/impl/tse_chunk_info.hpp [code] | |
| include/objmgr/impl/tse_info.hpp [code] | |
| include/objmgr/impl/tse_info_object.hpp [code] | |
| include/objmgr/impl/tse_loadlock.hpp [code] | |
| include/objmgr/impl/tse_lock.hpp [code] | |
| include/objmgr/impl/tse_scope_lock.hpp [code] | |
| include/objmgr/impl/tse_split_info.hpp [code] | |
| include/objmgr/split/annot_piece.hpp [code] | |
| include/objmgr/split/asn_sizer.hpp [code] | |
| include/objmgr/split/blob_splitter.hpp [code] | |
| include/objmgr/split/blob_splitter_impl.hpp [code] | |
| include/objmgr/split/blob_splitter_params.hpp [code] | |
| include/objmgr/split/chunk_info.hpp [code] | |
| include/objmgr/split/id2_compress.hpp [code] | |
| include/objmgr/split/id_range.hpp [code] | |
| include/objmgr/split/object_splitinfo.hpp [code] | |
| include/objmgr/split/place_id.hpp [code] | |
| include/objmgr/split/size.hpp [code] | |
| include/objmgr/split/split_blob.hpp [code] | |
| include/objmgr/split/split_exceptions.hpp [code] | |
| include/objmgr/util/autodef.hpp [code] | |
| include/objmgr/util/autodef_available_modifier.hpp [code] | |
| include/objmgr/util/autodef_feature_clause.hpp [code] | |
| include/objmgr/util/autodef_feature_clause_base.hpp [code] | |
| include/objmgr/util/autodef_mod_combo.hpp [code] | |
| include/objmgr/util/autodef_source_desc.hpp [code] | |
| include/objmgr/util/autodef_source_group.hpp [code] | |
| include/objmgr/util/create_defline.hpp [code] | |
| include/objmgr/util/feature.hpp [code] | |
| include/objmgr/util/genbank.hpp [code] | |
| include/objmgr/util/obj_sniff.hpp [code] | |
| include/objmgr/util/seq_align_util.hpp [code] | |
| include/objmgr/util/seq_loc_util.hpp [code] | |
| include/objmgr/util/sequence.hpp [code] | |
| include/objmgr/util/weight.hpp [code] | |
| include/objtools/error_codes.hpp [code] | |
| include/objtools/align/alngraphic.hpp [code] | |
| include/objtools/align_format/align_format_util.hpp [code] | |
| include/objtools/align_format/aln_printer.hpp [code] | |
| include/objtools/align_format/format_flags.hpp [code] | |
| include/objtools/align_format/seqalignfilter.hpp [code] | |
| include/objtools/align_format/showalign.hpp [code] | |
| include/objtools/align_format/showdefline.hpp [code] | |
| include/objtools/align_format/tabular.hpp [code] | |
| include/objtools/align_format/vectorscreen.hpp [code] | |
| include/objtools/alnmgr/aln_asn_reader.hpp [code] | |
| include/objtools/alnmgr/aln_builders.hpp [code] | |
| include/objtools/alnmgr/aln_container.hpp [code] | |
| include/objtools/alnmgr/aln_converters.hpp [code] | |
| include/objtools/alnmgr/aln_explorer.hpp [code] | |
| include/objtools/alnmgr/aln_generators.hpp [code] | |
| include/objtools/alnmgr/aln_rng_coll_oper.hpp [code] | |
| include/objtools/alnmgr/aln_seqid.hpp [code] | |
| include/objtools/alnmgr/aln_serial.hpp [code] | |
| include/objtools/alnmgr/aln_stats.hpp [code] | |
| include/objtools/alnmgr/aln_tests.hpp [code] | |
| include/objtools/alnmgr/aln_user_options.hpp [code] | |
| include/objtools/alnmgr/alndiag.hpp [code] | |
| include/objtools/alnmgr/alnexception.hpp [code] | |
| include/objtools/alnmgr/alnmap.hpp [code] | |
| include/objtools/alnmgr/alnmatch.hpp [code] | |
| include/objtools/alnmgr/alnmerger.hpp [code] | |
| include/objtools/alnmgr/alnmix.hpp [code] | |
| include/objtools/alnmgr/alnpos_ci.hpp [code] | |
| include/objtools/alnmgr/alnsegments.hpp [code] | |
| include/objtools/alnmgr/alnseq.hpp [code] | |
| include/objtools/alnmgr/alnvec.hpp [code] | |
| include/objtools/alnmgr/alnvec_iterator.hpp [code] | |
| include/objtools/alnmgr/pairwise_aln.hpp [code] | |
| include/objtools/alnmgr/seqid_comp.hpp [code] | |
| include/objtools/alnmgr/seqids_extractor.hpp [code] | |
| include/objtools/alnmgr/sparse_aln.hpp [code] | |
| include/objtools/alnmgr/sparse_ci.hpp [code] | |
| include/objtools/alnmgr/task_progress.hpp [code] | |
| include/objtools/blast/blastdb_format/blastdb_dataextract.hpp [code] | |
| include/objtools/blast/blastdb_format/blastdb_formatter.hpp [code] | Definition of a customizable BLAST DB information formatter interface |
| include/objtools/blast/blastdb_format/blastdb_seqid.hpp [code] | |
| include/objtools/blast/blastdb_format/invalid_data_exception.hpp [code] | |
| include/objtools/blast/blastdb_format/seq_writer.hpp [code] | |
| include/objtools/blast/gene_info_reader/file_utils.hpp [code] | |
| include/objtools/blast/gene_info_reader/gene_info.hpp [code] | |
| include/objtools/blast/gene_info_reader/gene_info_reader.hpp [code] | |
| include/objtools/blast/gene_info_writer/gene_info_writer.hpp [code] | |
| include/objtools/blast/seqdb_reader/column_reader.hpp [code] | |
| include/objtools/blast/seqdb_reader/seqdb.hpp [code] | |
| include/objtools/blast/seqdb_reader/seqdbblob.hpp [code] | |
| include/objtools/blast/seqdb_reader/seqdbcommon.hpp [code] | |
| include/objtools/blast/seqdb_reader/seqdbexpert.hpp [code] | |
| include/objtools/blast/seqdb_writer/build_db.hpp [code] | Code to build a database given various sources of sequence data |
| include/objtools/blast/seqdb_writer/multisource_util.hpp [code] | |
| include/objtools/blast/seqdb_writer/taxid_set.hpp [code] | |
| include/objtools/blast/seqdb_writer/writedb.hpp [code] | |
| include/objtools/blast/seqdb_writer/writedb_error.hpp [code] | |
| include/objtools/blast/services/blast_services.hpp [code] | Declares the CBlastServices class |
| include/objtools/blast_format/blast_format.hpp [code] | |
| include/objtools/blast_format/blastdb_dataextract.hpp [code] | |
| include/objtools/blast_format/blastdb_seqid.hpp [code] | |
| include/objtools/blast_format/blastfmtutil.hpp [code] | |
| include/objtools/blast_format/blastxml_format.hpp [code] | |
| include/objtools/blast_format/seq_writer.hpp [code] | |
| include/objtools/blast_format/seqalignfilter.hpp [code] | |
| include/objtools/blast_format/showalign.hpp [code] | |
| include/objtools/blast_format/showdefline.hpp [code] | |
| include/objtools/blast_format/tabular.hpp [code] | |
| include/objtools/blast_format/vectorscreen.hpp [code] | |
| include/objtools/cddalignview/cav_alignset.hpp [code] | |
| include/objtools/cddalignview/cav_alndisplay.hpp [code] | |
| include/objtools/cddalignview/cav_asnio.hpp [code] | |
| include/objtools/cddalignview/cav_seqset.hpp [code] | |
| include/objtools/cddalignview/cddalignview.h [code] | C interface header for cddalignview as function call |
| include/objtools/cddalignview/demo/cav_main.hpp [code] | |
| include/objtools/cleanup/cleanup.hpp [code] | |
| include/objtools/cleanup/cleanup_change.hpp [code] | |
| include/objtools/data_loaders/loaders.hpp [code] | |
| include/objtools/data_loaders/blastdb/bdbloader.hpp [code] | Data loader implementation that uses the blast databases |
| include/objtools/data_loaders/blastdb/bdbloader_rmt.hpp [code] | Data loader implementation that uses the blast databases remotely |
| include/objtools/data_loaders/blastdb/blastdb_adapter.hpp [code] | Interface definition of IBlastDbAdapter |
| include/objtools/data_loaders/cdd/cdd.hpp [code] | |
| include/objtools/data_loaders/genbank/blob_id.hpp [code] | |
| include/objtools/data_loaders/genbank/cache_manager.hpp [code] | |
| include/objtools/data_loaders/genbank/dispatcher.hpp [code] | |
| include/objtools/data_loaders/genbank/gbload_util.hpp [code] | |
| include/objtools/data_loaders/genbank/gbloader.hpp [code] | |
| include/objtools/data_loaders/genbank/gbloader_params.h [code] | |
| include/objtools/data_loaders/genbank/processor.hpp [code] | |
| include/objtools/data_loaders/genbank/processors.hpp [code] | |
| include/objtools/data_loaders/genbank/reader.hpp [code] | |
| include/objtools/data_loaders/genbank/reader_id1_base.hpp [code] | |
| include/objtools/data_loaders/genbank/reader_id2_base.hpp [code] | |
| include/objtools/data_loaders/genbank/reader_interface.hpp [code] | |
| include/objtools/data_loaders/genbank/reader_service.hpp [code] | |
| include/objtools/data_loaders/genbank/reader_snp.hpp [code] | |
| include/objtools/data_loaders/genbank/readers.hpp [code] | |
| include/objtools/data_loaders/genbank/request_result.hpp [code] | |
| include/objtools/data_loaders/genbank/seqref.hpp [code] | |
| include/objtools/data_loaders/genbank/split_parser.hpp [code] | |
| include/objtools/data_loaders/genbank/statistics.hpp [code] | |
| include/objtools/data_loaders/genbank/writer.hpp [code] | |
| include/objtools/data_loaders/genbank/writer_interface.hpp [code] | |
| include/objtools/data_loaders/genbank/cache/reader_cache.hpp [code] | |
| include/objtools/data_loaders/genbank/cache/reader_cache_entry.hpp [code] | |
| include/objtools/data_loaders/genbank/cache/reader_cache_params.h [code] | |
| include/objtools/data_loaders/genbank/cache/writer_cache.hpp [code] | |
| include/objtools/data_loaders/genbank/cache/writer_cache_entry.hpp [code] | |
| include/objtools/data_loaders/genbank/id1/reader_id1.hpp [code] | |
| include/objtools/data_loaders/genbank/id1/reader_id1_entry.hpp [code] | |
| include/objtools/data_loaders/genbank/id1/reader_id1_params.h [code] | |
| include/objtools/data_loaders/genbank/id2/reader_id2.hpp [code] | |
| include/objtools/data_loaders/genbank/id2/reader_id2_entry.hpp [code] | |
| include/objtools/data_loaders/genbank/id2/reader_id2_params.h [code] | |
| include/objtools/data_loaders/genbank/readers/cache/reader_cache.hpp [code] | |
| include/objtools/data_loaders/genbank/readers/cache/writer_cache.hpp [code] | |
| include/objtools/data_loaders/genbank/readers/id1/reader_id1.hpp [code] | |
| include/objtools/data_loaders/genbank/readers/id2/reader_id2.hpp [code] | |
| include/objtools/data_loaders/genbank/readers/pubseqos/reader_pubseq.hpp [code] | |
| include/objtools/data_loaders/genbank/readers/pubseqos2/reader_pubseq2.hpp [code] | |
| include/objtools/data_loaders/lds/lds_dataloader.hpp [code] | |
| include/objtools/data_loaders/patcher/loaderpatcher.hpp [code] | |
| include/objtools/data_loaders/trace/trace_chgr.hpp [code] | |
| include/objtools/edit/autodef.hpp [code] | |
| include/objtools/edit/autodef_available_modifier.hpp [code] | |
| include/objtools/edit/autodef_feature_clause.hpp [code] | |
| include/objtools/edit/autodef_feature_clause_base.hpp [code] | |
| include/objtools/edit/autodef_mod_combo.hpp [code] | |
| include/objtools/edit/autodef_source_desc.hpp [code] | |
| include/objtools/edit/autodef_source_group.hpp [code] | |
| include/objtools/edit/edit_exception.hpp [code] | |
| include/objtools/edit/promote.hpp [code] | |
| include/objtools/edit/seq_entry_edit.hpp [code] | |
| include/objtools/eutils/api/efetch.hpp [code] | |
| include/objtools/eutils/api/egquery.hpp [code] | |
| include/objtools/eutils/api/ehistory.hpp [code] | |
| include/objtools/eutils/api/einfo.hpp [code] | |
| include/objtools/eutils/api/elink.hpp [code] | |
| include/objtools/eutils/api/epost.hpp [code] | |
| include/objtools/eutils/api/esearch.hpp [code] | |
| include/objtools/eutils/api/espell.hpp [code] | |
| include/objtools/eutils/api/esummary.hpp [code] | |
| include/objtools/eutils/api/eutils.hpp [code] | |
| include/objtools/eutils/egquery/egquery__.hpp [code] | |
| include/objtools/eutils/egquery/egquery_doxygen.h [code] | |
| include/objtools/eutils/egquery/egquery_module.hpp [code] | |
| include/objtools/eutils/egquery/EGQueryResult.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/egquery/EGQueryResult_.hpp [code] | Data storage class |
| include/objtools/eutils/egquery/Result.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/egquery/Result_.hpp [code] | Data storage class |
| include/objtools/eutils/egquery/ResultItem.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/egquery/ResultItem_.hpp [code] | Data storage class |
| include/objtools/eutils/ehistory/ehistory__.hpp [code] | |
| include/objtools/eutils/ehistory/ehistory_doxygen.h [code] | |
| include/objtools/eutils/ehistory/ehistory_module.hpp [code] | |
| include/objtools/eutils/ehistory/EHistoryItem.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/ehistory/EHistoryItem_.hpp [code] | Data storage class |
| include/objtools/eutils/ehistory/EHistoryResult.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/ehistory/EHistoryResult_.hpp [code] | Data storage class |
| include/objtools/eutils/einfo/DbInfo.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/einfo/DbInfo_.hpp [code] | Data storage class |
| include/objtools/eutils/einfo/DbList.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/einfo/DbList_.hpp [code] | Data storage class |
| include/objtools/eutils/einfo/einfo__.hpp [code] | |
| include/objtools/eutils/einfo/einfo_doxygen.h [code] | |
| include/objtools/eutils/einfo/einfo_module.hpp [code] | |
| include/objtools/eutils/einfo/EInfoResult.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/einfo/EInfoResult_.hpp [code] | Data storage class |
| include/objtools/eutils/einfo/Field.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/einfo/Field_.hpp [code] | Data storage class |
| include/objtools/eutils/einfo/FieldList.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/einfo/FieldList_.hpp [code] | Data storage class |
| include/objtools/eutils/einfo/Link.hpp [code] | |
| include/objtools/eutils/einfo/Link_.hpp [code] | |
| include/objtools/eutils/einfo/LinkList.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/einfo/LinkList_.hpp [code] | Data storage class |
| include/objtools/eutils/elink/elink__.hpp [code] | |
| include/objtools/eutils/elink/elink_doxygen.h [code] | |
| include/objtools/eutils/elink/elink_module.hpp [code] | |
| include/objtools/eutils/elink/ELinkResult.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/elink/ELinkResult_.hpp [code] | Data storage class |
| include/objtools/eutils/elink/Id.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/elink/Id_.hpp [code] | Data storage class |
| include/objtools/eutils/elink/IdCheckList.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/elink/IdCheckList_.hpp [code] | Data storage class |
| include/objtools/eutils/elink/IdLinkSet.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/elink/IdLinkSet_.hpp [code] | Data storage class |
| include/objtools/eutils/elink/IdList.hpp [code] | |
| include/objtools/eutils/elink/IdList_.hpp [code] | |
| include/objtools/eutils/elink/IdUrlList.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/elink/IdUrlList_.hpp [code] | Data storage class |
| include/objtools/eutils/elink/IdUrlSet.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/elink/IdUrlSet_.hpp [code] | Data storage class |
| include/objtools/eutils/elink/Link.hpp [code] | |
| include/objtools/eutils/elink/Link_.hpp [code] | |
| include/objtools/eutils/elink/LinkInfo.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/elink/LinkInfo_.hpp [code] | Data storage class |
| include/objtools/eutils/elink/LinkSet.hpp [code] | |
| include/objtools/eutils/elink/LinkSet_.hpp [code] | |
| include/objtools/eutils/elink/LinkSetDb.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/elink/LinkSetDb_.hpp [code] | Data storage class |
| include/objtools/eutils/elink/LinkSetDbHistory.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/elink/LinkSetDbHistory_.hpp [code] | Data storage class |
| include/objtools/eutils/elink/ObjUrl.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/elink/ObjUrl_.hpp [code] | Data storage class |
| include/objtools/eutils/elink/Provider.hpp [code] | |
| include/objtools/eutils/elink/Provider_.hpp [code] | |
| include/objtools/eutils/epost/epost__.hpp [code] | |
| include/objtools/eutils/epost/epost_doxygen.h [code] | |
| include/objtools/eutils/epost/epost_module.hpp [code] | |
| include/objtools/eutils/epost/EPostResult.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/epost/EPostResult_.hpp [code] | Data storage class |
| include/objtools/eutils/epost/InvalidIdList.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/epost/InvalidIdList_.hpp [code] | Data storage class |
| include/objtools/eutils/esearch/ErrorList.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/esearch/ErrorList_.hpp [code] | Data storage class |
| include/objtools/eutils/esearch/esearch__.hpp [code] | |
| include/objtools/eutils/esearch/esearch_doxygen.h [code] | |
| include/objtools/eutils/esearch/esearch_module.hpp [code] | |
| include/objtools/eutils/esearch/ESearchResult.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/esearch/ESearchResult_.hpp [code] | Data storage class |
| include/objtools/eutils/esearch/IdList.hpp [code] | |
| include/objtools/eutils/esearch/IdList_.hpp [code] | |
| include/objtools/eutils/esearch/TermSet.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/esearch/TermSet_.hpp [code] | Data storage class |
| include/objtools/eutils/esearch/Translation.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/esearch/Translation_.hpp [code] | Data storage class |
| include/objtools/eutils/esearch/TranslationSet.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/esearch/TranslationSet_.hpp [code] | Data storage class |
| include/objtools/eutils/esearch/TranslationStack.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/esearch/TranslationStack_.hpp [code] | Data storage class |
| include/objtools/eutils/esearch/WarningList.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/esearch/WarningList_.hpp [code] | Data storage class |
| include/objtools/eutils/espell/espell__.hpp [code] | |
| include/objtools/eutils/espell/espell_doxygen.h [code] | |
| include/objtools/eutils/espell/espell_module.hpp [code] | |
| include/objtools/eutils/espell/ESpellResult.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/espell/ESpellResult_.hpp [code] | Data storage class |
| include/objtools/eutils/espell/SpelledQuery.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/espell/SpelledQuery_.hpp [code] | Data storage class |
| include/objtools/eutils/esummary/DocSum.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/esummary/DocSum_.hpp [code] | Data storage class |
| include/objtools/eutils/esummary/esummary__.hpp [code] | |
| include/objtools/eutils/esummary/esummary_doxygen.h [code] | |
| include/objtools/eutils/esummary/esummary_module.hpp [code] | |
| include/objtools/eutils/esummary/ESummaryResult.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/esummary/ESummaryResult_.hpp [code] | Data storage class |
| include/objtools/eutils/esummary/Item.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/esummary/Item_.hpp [code] | Data storage class |
| include/objtools/eutils/linkout/Apad.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/linkout/Apad_.hpp [code] | Data storage class |
| include/objtools/eutils/linkout/FileName.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/linkout/FileName_.hpp [code] | Data storage class |
| include/objtools/eutils/linkout/IconUrl.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/linkout/IconUrl_.hpp [code] | Data storage class |
| include/objtools/eutils/linkout/Link.hpp [code] | |
| include/objtools/eutils/linkout/Link_.hpp [code] | |
| include/objtools/eutils/linkout/linkout__.hpp [code] | |
| include/objtools/eutils/linkout/linkout_doxygen.h [code] | |
| include/objtools/eutils/linkout/linkout_module.hpp [code] | |
| include/objtools/eutils/linkout/LinkSet.hpp [code] | |
| include/objtools/eutils/linkout/LinkSet_.hpp [code] | |
| include/objtools/eutils/linkout/Normalize.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/linkout/Normalize_.hpp [code] | Data storage class |
| include/objtools/eutils/linkout/ObjectList.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/linkout/ObjectList_.hpp [code] | Data storage class |
| include/objtools/eutils/linkout/ObjectSelector.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/linkout/ObjectSelector_.hpp [code] | Data storage class |
| include/objtools/eutils/linkout/ObjectUrl.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/linkout/ObjectUrl_.hpp [code] | Data storage class |
| include/objtools/eutils/linkout/Pad.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/linkout/Pad_.hpp [code] | Data storage class |
| include/objtools/eutils/linkout/Provider.hpp [code] | |
| include/objtools/eutils/linkout/Provider_.hpp [code] | |
| include/objtools/eutils/linkout/Rule.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/linkout/Rule_.hpp [code] | Data storage class |
| include/objtools/eutils/linkout/RuleToMany.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/linkout/RuleToMany_.hpp [code] | Data storage class |
| include/objtools/eutils/linkout/Strip.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/linkout/Strip_.hpp [code] | Data storage class |
| include/objtools/eutils/linkout/SubObjectSelector.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/linkout/SubObjectSelector_.hpp [code] | Data storage class |
| include/objtools/eutils/linkout/SubProvider.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/linkout/SubProvider_.hpp [code] | Data storage class |
| include/objtools/eutils/linkout/Subs.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/linkout/Subs_.hpp [code] | Data storage class |
| include/objtools/eutils/linkout/Tolower.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/linkout/Tolower_.hpp [code] | Data storage class |
| include/objtools/eutils/linkout/Toupper.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/linkout/Toupper_.hpp [code] | Data storage class |
| include/objtools/eutils/linkout/Url.hpp [code] | User-defined methods of the data storage class |
| include/objtools/eutils/linkout/Url_.hpp [code] | Data storage class |
| include/objtools/eutils/uilist/IdList.hpp [code] | |
| include/objtools/eutils/uilist/IdList_.hpp [code] | |
| include/objtools/eutils/uilist/uilist__.hpp [code] | |
| include/objtools/eutils/uilist/uilist_doxygen.h [code] | |
| include/objtools/eutils/uilist/uilist_module.hpp [code] | |
| include/objtools/format/context.hpp [code] | |
| include/objtools/format/embl_formatter.hpp [code] | |
| include/objtools/format/embl_gather.hpp [code] | |
| include/objtools/format/feature_gather.hpp [code] | |
| include/objtools/format/flat_expt.hpp [code] | |
| include/objtools/format/flat_file_config.hpp [code] | |
| include/objtools/format/flat_file_generator.hpp [code] | |
| include/objtools/format/format_item_ostream.hpp [code] | |
| include/objtools/format/formatter.hpp [code] | |
| include/objtools/format/ftable_formatter.hpp [code] | |
| include/objtools/format/ftable_gather.hpp [code] | |
| include/objtools/format/gather_items.hpp [code] | |
| include/objtools/format/gbseq_formatter.hpp [code] | |
| include/objtools/format/genbank_formatter.hpp [code] | |
| include/objtools/format/genbank_gather.hpp [code] | |
| include/objtools/format/gff3_formatter.hpp [code] | Flat formatter for Generic Feature Format version 3 |
| include/objtools/format/gff_formatter.hpp [code] | |
| include/objtools/format/gff_gather.hpp [code] | |
| include/objtools/format/item_formatter.hpp [code] | |
| include/objtools/format/item_ostream.hpp [code] | |
| include/objtools/format/ostream_text_ostream.hpp [code] | |
| include/objtools/format/text_ostream.hpp [code] | |
| include/objtools/format/items/accession_item.hpp [code] | |
| include/objtools/format/items/alignment_item.hpp [code] | |
| include/objtools/format/items/basecount_item.hpp [code] | |
| include/objtools/format/items/comment_item.hpp [code] | |
| include/objtools/format/items/contig_item.hpp [code] | |
| include/objtools/format/items/ctrl_items.hpp [code] | |
| include/objtools/format/items/date_item.hpp [code] | |
| include/objtools/format/items/dbsource_item.hpp [code] | |
| include/objtools/format/items/defline_item.hpp [code] | |
| include/objtools/format/items/feature_item.hpp [code] | |
| include/objtools/format/items/flat_qual_slots.hpp [code] | |
| include/objtools/format/items/flat_seqloc.hpp [code] | |
| include/objtools/format/items/gap_item.hpp [code] | |
| include/objtools/format/items/genome_item.hpp [code] | |
| include/objtools/format/items/genome_project_item.hpp [code] | |
| include/objtools/format/items/item.hpp [code] | |
| include/objtools/format/items/item_base.hpp [code] | |
| include/objtools/format/items/keywords_item.hpp [code] | |
| include/objtools/format/items/locus_item.hpp [code] | |
| include/objtools/format/items/origin_item.hpp [code] | |
| include/objtools/format/items/primary_item.hpp [code] | |
| include/objtools/format/items/qualifiers.hpp [code] | |
| include/objtools/format/items/reference_item.hpp [code] | |
| include/objtools/format/items/segment_item.hpp [code] | |
| include/objtools/format/items/sequence_item.hpp [code] | |
| include/objtools/format/items/source_item.hpp [code] | |
| include/objtools/format/items/version_item.hpp [code] | |
| include/objtools/format/items/wgs_item.hpp [code] | |
| include/objtools/lds/lds.hpp [code] | |
| include/objtools/lds/lds_coreobjreader.hpp [code] | |
| include/objtools/lds/lds_db.hpp [code] | |
| include/objtools/lds/lds_expt.hpp [code] | |
| include/objtools/lds/lds_files.hpp [code] | |
| include/objtools/lds/lds_manager.hpp [code] | |
| include/objtools/lds/lds_object.hpp [code] | |
| include/objtools/lds/lds_query.hpp [code] | |
| include/objtools/lds/lds_reader.hpp [code] | |
| include/objtools/lds/lds_set.hpp [code] | |
| include/objtools/lds/lds_util.hpp [code] | |
| include/objtools/manip/sage_manip.hpp [code] | |
| include/objtools/readers/agp_read.hpp [code] | |
| include/objtools/readers/agp_util.hpp [code] | |
| include/objtools/readers/aln_reader.hpp [code] | |
| include/objtools/readers/bed_reader.hpp [code] | |
| include/objtools/readers/cigar.hpp [code] | Code to handle Concise Idiosyncratic Gapped Alignment Report notation |
| include/objtools/readers/error_container.hpp [code] | |
| include/objtools/readers/fasta.hpp [code] | Interfaces for reading and scanning FASTA-format sequences |
| include/objtools/readers/featuredump.hpp [code] | |
| include/objtools/readers/getfeature.hpp [code] | |
| include/objtools/readers/gff3_reader.hpp [code] | |
| include/objtools/readers/gff_reader.hpp [code] | Reader for GFF (including GTF) files |
| include/objtools/readers/glimmer_reader.hpp [code] | |
| include/objtools/readers/idmapper.hpp [code] | |
| include/objtools/readers/iidmapper.hpp [code] | |
| include/objtools/readers/line_error.hpp [code] | |
| include/objtools/readers/microarray_reader.hpp [code] | |
| include/objtools/readers/multireader.hpp [code] | |
| include/objtools/readers/phrap.hpp [code] | |
| include/objtools/readers/reader_base.hpp [code] | |
| include/objtools/readers/reader_exception.hpp [code] | |
| include/objtools/readers/readfeat.hpp [code] | |
| include/objtools/readers/rm_reader.hpp [code] | |
| include/objtools/readers/wiggle_reader.hpp [code] | |
| include/objtools/readers/gene_info/file_utils.hpp [code] | |
| include/objtools/readers/gene_info/gene_info.hpp [code] | |
| include/objtools/readers/gene_info/gene_info_reader.hpp [code] | |
| include/objtools/readers/seqdb/column_reader.hpp [code] | |
| include/objtools/readers/seqdb/seqdb.hpp [code] | |
| include/objtools/readers/seqdb/seqdbblob.hpp [code] | |
| include/objtools/readers/seqdb/seqdbcommon.hpp [code] | |
| include/objtools/readers/seqdb/seqdbexpert.hpp [code] | |
| include/objtools/seqmasks_io/mask_bdb_reader.hpp [code] | |
| include/objtools/seqmasks_io/mask_cmdline_args.hpp [code] | Contains the command line options common to filtering algorithms |
| include/objtools/seqmasks_io/mask_fasta_reader.hpp [code] | |
| include/objtools/seqmasks_io/mask_reader.hpp [code] | |
| include/objtools/seqmasks_io/mask_writer.hpp [code] | |
| include/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.hpp [code] | |
| include/objtools/seqmasks_io/mask_writer_fasta.hpp [code] | |
| include/objtools/seqmasks_io/mask_writer_int.hpp [code] | |
| include/objtools/seqmasks_io/mask_writer_seqloc.hpp [code] | |
| include/objtools/simple/simple_om.hpp [code] | |
| include/objtools/validator/validator.hpp [code] | |
| include/objtools/writers/agp_write.hpp [code] | |
| include/objtools/writers/writer_exception.hpp [code] | |
| include/objtools/writers/gene_info/gene_info_writer.hpp [code] | |
| include/objtools/writers/writedb/build_db.hpp [code] | |
| include/objtools/writers/writedb/multisource_util.hpp [code] | |
| include/objtools/writers/writedb/taxid_set.hpp [code] | |
| include/objtools/writers/writedb/writedb.hpp [code] | |
| include/objtools/writers/writedb/writedb_error.hpp [code] | |
| include/sample/app/asn/NCBI_Sample_ASN_module.hpp [code] | |
| include/sample/app/asn/NCBI_Sample_ASN_Type.hpp [code] | User-defined methods of the data storage class |
| include/sample/app/asn/NCBI_Sample_ASN_Type_.hpp [code] | Data storage class |
| include/sample/app/asn/sample_asn__.hpp [code] | |
| include/sample/app/asn/sample_asn_doxygen.h [code] | |
| include/sample/app/soap/Description.hpp [code] | |
| include/sample/app/soap/Description_.hpp [code] | |
| include/sample/app/soap/DescriptionText.hpp [code] | User-defined methods of the data storage class |
| include/sample/app/soap/DescriptionText_.hpp [code] | Data storage class |
| include/sample/app/soap/Math.hpp [code] | User-defined methods of the data storage class |
| include/sample/app/soap/Math_.hpp [code] | Data storage class |
| include/sample/app/soap/MathResponse.hpp [code] | User-defined methods of the data storage class |
| include/sample/app/soap/MathResponse_.hpp [code] | Data storage class |
| include/sample/app/soap/Operand.hpp [code] | User-defined methods of the data storage class |
| include/sample/app/soap/Operand_.hpp [code] | Data storage class |
| include/sample/app/soap/soap_dataobj__.hpp [code] | |
| include/sample/app/soap/soap_dataobj_doxygen.h [code] | |
| include/sample/app/soap/soap_dataobj_module.hpp [code] | |
| include/sample/app/soap/Version.hpp [code] | User-defined methods of the data storage class |
| include/sample/app/soap/Version_.hpp [code] | Data storage class |
| include/sample/app/soap/VersionResponse.hpp [code] | User-defined methods of the data storage class |
| include/sample/app/soap/VersionResponse_.hpp [code] | Data storage class |
| include/sample/app/soap/VersionStruct.hpp [code] | User-defined methods of the data storage class |
| include/sample/app/soap/VersionStruct_.hpp [code] | Data storage class |
| include/sample/lib/asn_lib/asn_sample_lib__.hpp [code] | |
| include/sample/lib/asn_lib/asn_sample_lib_doxygen.h [code] | |
| include/sample/lib/asn_lib/Data_set_id.hpp [code] | |
| include/sample/lib/asn_lib/Data_set_id_.hpp [code] | |
| include/sample/lib/asn_lib/NCBI_sample_module.hpp [code] | |
| include/sample/lib/basic/sample_lib_basic.hpp [code] | |
| include/sample/lib/dtd/Data_set_id.hpp [code] | |
| include/sample/lib/dtd/Data_set_id_.hpp [code] | |
| include/sample/lib/dtd/Data_set_id_type.hpp [code] | User-defined methods of the data storage class |
| include/sample/lib/dtd/Data_set_id_type_.hpp [code] | Data storage class |
| include/sample/lib/dtd/Data_set_id_uids.hpp [code] | User-defined methods of the data storage class |
| include/sample/lib/dtd/Data_set_id_uids_.hpp [code] | Data storage class |
| include/sample/lib/dtd/dtd_sample_lib__.hpp [code] | |
| include/sample/lib/dtd/dtd_sample_lib_doxygen.h [code] | |
| include/sample/lib/dtd/dtd_sample_lib_module.hpp [code] | |
| include/sample/lib/xsd/Data_set_id.hpp [code] | |
| include/sample/lib/xsd/Data_set_id_.hpp [code] | |
| include/sample/lib/xsd/xsd_sample_lib__.hpp [code] | |
| include/sample/lib/xsd/xsd_sample_lib_doxygen.h [code] | |
| include/sample/lib/xsd/xsd_sample_lib_module.hpp [code] | |
| include/serial/delaybuf.hpp [code] | |
| include/serial/enumvalues.hpp [code] | |
| include/serial/error_codes.hpp [code] | |
| include/serial/exception.hpp [code] | |
| include/serial/iterator.hpp [code] | |
| include/serial/objcopy.hpp [code] | |
| include/serial/objectinfo.hpp [code] | |
| include/serial/objectio.hpp [code] | |
| include/serial/objectiter.hpp [code] | |
| include/serial/objhook.hpp [code] | |
| include/serial/objistr.hpp [code] | |
| include/serial/objistrasn.hpp [code] | |
| include/serial/objistrasnb.hpp [code] | |
| include/serial/objistrxml.hpp [code] | |
| include/serial/objostr.hpp [code] | |
| include/serial/objostrasn.hpp [code] | |
| include/serial/objostrasnb.hpp [code] | |
| include/serial/objostrjson.hpp [code] | |
| include/serial/objostrxml.hpp [code] | |
| include/serial/pack_string.hpp [code] | |
| include/serial/rpcbase.hpp [code] | |
| include/serial/serial.hpp [code] | |
| include/serial/serialasn.hpp [code] | |
| include/serial/serialbase.hpp [code] | |
| include/serial/serialdef.hpp [code] | |
| include/serial/serialimpl.hpp [code] | |
| include/serial/serializable.hpp [code] | |
| include/serial/serialutil.hpp [code] | |
| include/serial/streamiter.hpp [code] | |
| include/serial/typeinfo.hpp [code] | |
| include/serial/impl/aliasinfo.hpp [code] | |
| include/serial/impl/asntypes.hpp [code] | |
| include/serial/impl/autoptrinfo.hpp [code] | |
| include/serial/impl/choice.hpp [code] | |
| include/serial/impl/choice.inl [code] | |
| include/serial/impl/choiceptr.hpp [code] | |
| include/serial/impl/classinfo.hpp [code] | |
| include/serial/impl/classinfo.inl [code] | |
| include/serial/impl/classinfob.hpp [code] | |
| include/serial/impl/classinfob.inl [code] | |
| include/serial/impl/classinfohelper.hpp [code] | |
| include/serial/impl/continfo.hpp [code] | |
| include/serial/impl/continfo.inl [code] | |
| include/serial/impl/enumerated.hpp [code] | |
| include/serial/impl/hookdata.hpp [code] | |
| include/serial/impl/hookdatakey.hpp [code] | |
| include/serial/impl/hookfunc.hpp [code] | |
| include/serial/impl/item.hpp [code] | |
| include/serial/impl/item.inl [code] | |
| include/serial/impl/member.hpp [code] | |
| include/serial/impl/member.inl [code] | |
| include/serial/impl/memberid.hpp [code] | |
| include/serial/impl/memberid.inl [code] | |
| include/serial/impl/memberlist.hpp [code] | |
| include/serial/impl/memberlist.inl [code] | |
| include/serial/impl/objcopy.inl [code] | |
| include/serial/impl/objectinfo.inl [code] | |
| include/serial/impl/objectio.inl [code] | |
| include/serial/impl/objectiter.inl [code] | |
| include/serial/impl/objecttype.hpp [code] | |
| include/serial/impl/objistr.inl [code] | |
| include/serial/impl/objistrasnb.inl [code] | |
| include/serial/impl/objistrimpl.hpp [code] | |
| include/serial/impl/objistrxml.inl [code] | |
| include/serial/impl/objlist.hpp [code] | |
| include/serial/impl/objlist.inl [code] | |
| include/serial/impl/objostr.inl [code] | |
| include/serial/impl/objostrxml.inl [code] | |
| include/serial/impl/objstack.hpp [code] | |
| include/serial/impl/objstack.inl [code] | |
| include/serial/impl/objstrasnb.hpp [code] | |
| include/serial/impl/objstrasnb.inl [code] | |
| include/serial/impl/pathhook.hpp [code] | |
| include/serial/impl/ptrinfo.hpp [code] | |
| include/serial/impl/ptrinfo.inl [code] | |
| include/serial/impl/serialasndef.hpp [code] | |
| include/serial/impl/stdtypeinfo.hpp [code] | |
| include/serial/impl/stdtypes.hpp [code] | |
| include/serial/impl/stdtypes.inl [code] | |
| include/serial/impl/stdtypesimpl.hpp [code] | |
| include/serial/impl/stltypes.hpp [code] | |
| include/serial/impl/stltypesimpl.hpp [code] | |
| include/serial/impl/timetypeinfo.hpp [code] | |
| include/serial/impl/typeinfo.inl [code] | |
| include/serial/impl/typeinfoimpl.hpp [code] | |
| include/serial/impl/typemap.hpp [code] | |
| include/serial/impl/typemapimpl.hpp [code] | |
| include/serial/impl/typeref.hpp [code] | |
| include/serial/impl/typeref.inl [code] | |
| include/serial/impl/variant.hpp [code] | |
| include/serial/impl/variant.inl [code] | |
| include/serial/soap/soap_11__.hpp [code] | |
| include/serial/soap/soap_11_module.hpp [code] | |
| include/serial/soap/soap_body.hpp [code] | User-defined methods of the data storage class |
| include/serial/soap/soap_body_.hpp [code] | Data storage class |
| include/serial/soap/soap_client.hpp [code] | |
| include/serial/soap/soap_detail.hpp [code] | User-defined methods of the data storage class |
| include/serial/soap/soap_detail_.hpp [code] | Data storage class |
| include/serial/soap/soap_envelope.hpp [code] | User-defined methods of the data storage class |
| include/serial/soap/soap_envelope_.hpp [code] | Data storage class |
| include/serial/soap/soap_fault.hpp [code] | User-defined methods of the data storage class |
| include/serial/soap/soap_fault_.hpp [code] | Data storage class |
| include/serial/soap/soap_header.hpp [code] | User-defined methods of the data storage class |
| include/serial/soap/soap_header_.hpp [code] | Data storage class |
| include/serial/soap/soap_message.hpp [code] | |
| include/serial/soap/soap_server.hpp [code] | |
| include/util/align_range.hpp [code] | |
| include/util/align_range_coll.hpp [code] | |
| include/util/align_range_oper.hpp [code] | |
| include/util/arg_regexp.hpp [code] | |
| include/util/ascii85.hpp [code] | |
| include/util/bytesrc.hpp [code] | |
| include/util/checksum.hpp [code] | |
| include/util/checksum.inl [code] | |
| include/util/ddump_viewer.hpp [code] | |
| include/util/dictionary.hpp [code] | |
| include/util/dictionary_util.hpp [code] | |
| include/util/distribution.hpp [code] | |
| include/util/error_codes.hpp [code] | |
| include/util/file_obsolete.hpp [code] | Delete old files from the specified directory |
| include/util/floating_point.hpp [code] | |
| include/util/format_guess.hpp [code] | |
| include/util/id_mux.hpp [code] | Classes and interfaces to map integer ids into multi-dimension coordinates |
| include/util/itransaction.hpp [code] | |
| include/util/itree.hpp [code] | |
| include/util/itree.inl [code] | |
| include/util/lightstr.hpp [code] | |
| include/util/line_reader.hpp [code] | Lightweight interface for getting lines of data with minimal memory copying |
| include/util/linkedset.hpp [code] | |
| include/util/lock_vector.hpp [code] | |
| include/util/logrotate.hpp [code] | This module supplies a file stream variant that supports customizable log rotation |
| include/util/mask_regexp.hpp [code] | |
| include/util/md5.hpp [code] | CMD5 - class for computing Message Digest version 5 checksums |
| include/util/miscmath.h [code] | |
| include/util/multi_writer.hpp [code] | |
| include/util/mutex_pool.hpp [code] | |
| include/util/ncbi_cache.hpp [code] | The NCBI C++ generic cache template |
| include/util/ncbi_table.hpp [code] | |
| include/util/random_gen.hpp [code] | |
| include/util/range.hpp [code] | |
| include/util/range_coll.hpp [code] | |
| include/util/rangemap.hpp [code] | |
| include/util/rangemap.inl [code] | |
| include/util/reader_writer.hpp [code] | |
| include/util/regexp.hpp [code] | |
| include/util/request_control.hpp [code] | |
| include/util/resize_iter.hpp [code] | |
| include/util/resource_pool.hpp [code] | |
| include/util/rwstream.hpp [code] | |
| include/util/scheduler.hpp [code] | Scheduler-related classes |
| include/util/sgml_entity.hpp [code] | |
| include/util/simple_buffer.hpp [code] | |
| include/util/smalldns.hpp [code] | Resolve host name to ip address and back using preset ini-file |
| include/util/static_map.hpp [code] | |
| include/util/static_set.hpp [code] | |
| include/util/strbuffer.hpp [code] | |
| include/util/strbuffer.inl [code] | |
| include/util/strsearch.hpp [code] | String search utilities |
| include/util/sync_queue.hpp [code] | Definition of synchronized queue (CSyncQueue template) and templates related to it |
| include/util/thread_nonstop.hpp [code] | |
| include/util/thread_pool.hpp [code] | Pool of generic task-executing threads |
| include/util/thread_pool_ctrl.hpp [code] | Implementations of controllers for ThreadPool |
| include/util/thread_pool_old.hpp [code] | |
| include/util/time_line.hpp [code] | |
| include/util/transmissionrw.hpp [code] | Reader writer with transmission checking |
| include/util/unicode.hpp [code] | |
| include/util/utf8.hpp [code] | |
| include/util/util_exception.hpp [code] | |
| include/util/util_misc.hpp [code] | |
| include/util/uttp.hpp [code] | This file contains declaration of the CDiscreteDistribution class |
| include/util/value_convert.hpp [code] | |
| include/util/value_convert_policy.hpp [code] | |
| include/util/weakmap.hpp [code] | |
| include/util/weakmap.inl [code] | |
| include/util/bitset/bitset_debug.hpp [code] | Set debugging utilities |
| include/util/bitset/bitset_pool.hpp [code] | |
| include/util/bitset/bm.h [code] | |
| include/util/bitset/bmalgo.h [code] | |
| include/util/bitset/bmalgo_impl.h [code] | |
| include/util/bitset/bmalloc.h [code] | |
| include/util/bitset/bmblocks.h [code] | |
| include/util/bitset/bmconst.h [code] | |
| include/util/bitset/bmdef.h [code] | |
| include/util/bitset/bmfunc.h [code] | |
| include/util/bitset/bmfwd.h [code] | |
| include/util/bitset/bmserial.h [code] | |
| include/util/bitset/bmsse2.h [code] | |
| include/util/bitset/bmundef.h [code] | |
| include/util/bitset/bmvmin.h [code] | |
| include/util/bitset/encoding.h [code] | |
| include/util/bitset/ncbi_bitset.hpp [code] | Compressed bitset (entry point to bm.h) |
| include/util/bitset/ncbi_bitset_alloc.hpp [code] | Bitset allocator |
| include/util/bitset/ncbi_bitset_util.hpp [code] | Bitset relates utilities |
| include/util/cache/cache_ref.hpp [code] | Cache (ICache) external reference using hash key(CRC32, MD5) |
| include/util/cache/icache.hpp [code] | Cache interface specs |
| include/util/cache/icache_cf.hpp [code] | |
| include/util/cache/icache_clean_thread.hpp [code] | |
| include/util/compress/bzip2.hpp [code] | |
| include/util/compress/compress.hpp [code] | |
| include/util/compress/lzo.hpp [code] | LZO Compression API |
| include/util/compress/reader_zlib.hpp [code] | |
| include/util/compress/stream.hpp [code] | |
| include/util/compress/tar.hpp [code] | Tar archive API |
| include/util/compress/zlib.hpp [code] | ZLib Compression API |
| include/util/compress/bzip2/bzlib.h [code] | |
| include/util/compress/zlib/zconf.h [code] | |
| include/util/compress/zlib/zlib.h [code] | |
| include/util/compress/zlib/zutil.h [code] | |
| include/util/creaders/alnread.h [code] | |
| include/util/creaders/creaders_export.h [code] | |
| include/util/debug/map.hpp [code] | |
| include/util/debug/set.hpp [code] | |
| include/util/fileblobstorage/blobstorage_file.hpp [code] | |
| include/util/image/image.hpp [code] | |
| include/util/image/image_exception.hpp [code] | |
| include/util/image/image_io.hpp [code] | |
| include/util/image/image_util.hpp [code] | |
| include/util/impl/floating_point_comparison.hpp [code] | |
| include/util/math/matrix.hpp [code] | |
| include/util/math/miscmath.h [code] | |
| include/util/math/promote.hpp [code] | |
| include/util/qparse/query_exec.hpp [code] | Query parser execution implementations |
| include/util/qparse/query_exec_bv.hpp [code] | |
| include/util/qparse/query_parse.hpp [code] | Query string parsing components |
| include/util/regexp/pcre.h [code] | |
| include/util/regexp/pcrecpp.h [code] | |
| include/util/regexp/pcrecpparg.h [code] | |
| include/util/regexp/pcreposix.h [code] | |
| include/util/sequtil/sequtil.hpp [code] | |
| include/util/sequtil/sequtil_convert.hpp [code] | |
| include/util/sequtil/sequtil_expt.hpp [code] | |
| include/util/sequtil/sequtil_manip.hpp [code] | |
| include/util/tables/raw_scoremat.h [code] | |
| include/util/tables/tables_export.h [code] | |
| include/util/xregexp/arg_regexp.hpp [code] | |
| include/util/xregexp/mask_regexp.hpp [code] | |
| include/util/xregexp/regexp.hpp [code] | |
| src/algo/align/contig_assembly/contig_assembly.cpp [code] | |
| src/algo/align/contig_assembly/demo/demo_contig_assembly.cpp [code] | |
| src/algo/align/ngalign/alignment_filterer.cpp [code] | |
| src/algo/align/ngalign/alignment_scorer.cpp [code] | |
| src/algo/align/ngalign/banded_aligner.cpp [code] | |
| src/algo/align/ngalign/blast_aligner.cpp [code] | |
| src/algo/align/ngalign/merge_aligner.cpp [code] | |
| src/algo/align/ngalign/ngalign.cpp [code] | |
| src/algo/align/ngalign/result_set.cpp [code] | |
| src/algo/align/ngalign/sequence_set.cpp [code] | |
| src/algo/align/nw/messages.hpp [code] | |
| src/algo/align/nw/mm_aligner.cpp [code] | |
| src/algo/align/nw/mm_aligner_threads.cpp [code] | |
| src/algo/align/nw/mm_aligner_threads.hpp [code] | |
| src/algo/align/nw/nw_aligner.cpp [code] | |
| src/algo/align/nw/nw_aligner_threads.cpp [code] | |
| src/algo/align/nw/nw_aligner_threads.hpp [code] | |
| src/algo/align/nw/nw_band_aligner.cpp [code] | |
| src/algo/align/nw/nw_formatter.cpp [code] | |
| src/algo/align/nw/nw_pssm_aligner.cpp [code] | |
| src/algo/align/nw/nw_spliced_aligner.cpp [code] | |
| src/algo/align/nw/nw_spliced_aligner16.cpp [code] | |
| src/algo/align/nw/nw_spliced_aligner32.cpp [code] | |
| src/algo/align/prosplign/Ali.cpp [code] | |
| src/algo/align/prosplign/Ali.hpp [code] | |
| src/algo/align/prosplign/AlignInfo.cpp [code] | |
| src/algo/align/prosplign/AlignInfo.hpp [code] | |
| src/algo/align/prosplign/AliSeqAlign.cpp [code] | |
| src/algo/align/prosplign/AliSeqAlign.hpp [code] | |
| src/algo/align/prosplign/BackAlignInfo.hpp [code] | |
| src/algo/align/prosplign/compartments.cpp [code] | |
| src/algo/align/prosplign/Info.cpp [code] | |
| src/algo/align/prosplign/Info.hpp [code] | |
| src/algo/align/prosplign/intron.cpp [code] | |
| src/algo/align/prosplign/intron.hpp [code] | |
| src/algo/align/prosplign/IntronChain.hpp [code] | |
| src/algo/align/prosplign/NSeq.cpp [code] | |
| src/algo/align/prosplign/NSeq.hpp [code] | |
| src/algo/align/prosplign/nucprot.cpp [code] | |
| src/algo/align/prosplign/nucprot.hpp [code] | |
| src/algo/align/prosplign/prosplign.cpp [code] | |
| src/algo/align/prosplign/PSeq.cpp [code] | |
| src/algo/align/prosplign/PSeq.hpp [code] | |
| src/algo/align/prosplign/scoring.cpp [code] | |
| src/algo/align/prosplign/scoring.hpp [code] | |
| src/algo/align/prosplign/demo/prosplign_demo.cpp [code] | |
| src/algo/align/splign/messages.hpp [code] | |
| src/algo/align/splign/splign.cpp [code] | |
| src/algo/align/splign/splign_cmdargs.cpp [code] | |
| src/algo/align/splign/splign_formatter.cpp [code] | |
| src/algo/align/splign/splign_simple.cpp [code] | |
| src/algo/align/splign/splign_util.cpp [code] | |
| src/algo/align/splign/splign_util.hpp [code] | |
| src/algo/align/util/align_filter.cpp [code] | |
| src/algo/align/util/align_shadow.cpp [code] | |
| src/algo/align/util/blast_tabular.cpp [code] | |
| src/algo/align/util/score_builder.cpp [code] | |
| src/algo/align/util/demo/compart/compart.cpp [code] | |
| src/algo/align/util/demo/compart/compart.hpp [code] | |
| src/algo/align/util/demo/compart/em.cpp [code] | |
| src/algo/align/util/demo/compart/em.hpp [code] | |
| src/algo/align/util/demo/hfilter/hitfilter_app.cpp [code] | |
| src/algo/align/util/demo/hfilter/hitfilter_app.hpp [code] | |
| src/algo/align/util/unit_test/score_builder_unit_test.cpp [code] | |
| src/algo/blast/api/bioseq_extract_data_priv.cpp [code] | Implementations of CBlastQuerySourceBioseqSet and CBlastSeqVectorFromCSeq_data classes |
| src/algo/blast/api/bioseq_extract_data_priv.hpp [code] | Internal auxiliary setup classes/functions for extracting sequence data from Bioseqs |
| src/algo/blast/api/bl2seq.cpp [code] | Implementation of CBl2Seq class |
| src/algo/blast/api/blast_advprot_options.cpp [code] | Implements the CBlastAdvancedProteinOptionsHandle class |
| src/algo/blast/api/blast_aux.cpp [code] | Implements C++ wrapper classes for structures in algo/blast/core as well as some auxiliary functions to convert CSeq_loc to/from BlastMask structures |
| src/algo/blast/api/blast_aux_priv.cpp [code] | Implements various auxiliary (private) functions for BLAST |
| src/algo/blast/api/blast_aux_priv.hpp [code] | Auxiliary functions for BLAST |
| src/algo/blast/api/blast_dbindex.cpp [code] | Functionality for indexed databases |
| src/algo/blast/api/blast_memento_priv.hpp [code] | Classes that capture the state of the BLAST options (or subsets of options) and restore them later (usually upon destruction) using the RAII idiom |
| src/algo/blast/api/blast_mtlock.cpp [code] | Initialization for the mutex locking interface |
| src/algo/blast/api/blast_nucl_options.cpp [code] | Implements the CBlastNucleotideOptionsHandle class |
| src/algo/blast/api/blast_objmgr_priv.hpp [code] | Definitions which are dependant on the NCBI C++ Object Manager |
| src/algo/blast/api/blast_objmgr_tools.cpp [code] | Functions in xblast API code that interact with object manager |
| src/algo/blast/api/blast_options_builder.cpp [code] | Defines the CBlastOptionsBuilder class |
| src/algo/blast/api/blast_options_cxx.cpp [code] | Implements the CBlastOptions class, which encapsulates options structures from algo/blast/core |
| src/algo/blast/api/blast_options_handle.cpp [code] | Implementation for the CBlastOptionsHandle and the CBlastOptionsFactory classes |
| src/algo/blast/api/blast_options_local_priv.cpp [code] | Definition of local representation of BLAST options |
| src/algo/blast/api/blast_options_local_priv.hpp [code] | Private header for local representation of BLAST options |
| src/algo/blast/api/blast_prot_options.cpp [code] | Implements the CBlastProteinOptionsHandle class |
| src/algo/blast/api/blast_results.cpp [code] | Implementation of classes which constitute the results of running a BLAST search |
| src/algo/blast/api/blast_rps_options.cpp [code] | Implements the CBlastRPSOptionsHandle class |
| src/algo/blast/api/blast_seqalign.cpp [code] | Utility function to convert internal BLAST result structures into CSeq_align_set objects |
| src/algo/blast/api/blast_seqalign.hpp [code] | Utility function to convert internal BLAST result structures into objects::CSeq_align_set objects |
| src/algo/blast/api/blast_seqinfosrc_aux.cpp [code] | Implementation of auxiliary functions using IBlastSeqInfoSrc to retrieve ids and related sequence information |
| src/algo/blast/api/blast_setup.hpp [code] | Internal auxiliary setup classes/functions for C++ BLAST APIs |
| src/algo/blast/api/blast_setup_cxx.cpp [code] | Auxiliary setup functions for Blast objects interface |
| src/algo/blast/api/blastx_options.cpp [code] | Implements the CBlastxOptionsHandle class |
| src/algo/blast/api/disc_nucl_options.cpp [code] | Implements the CDiscNucleotideOptionsHandle class |
| src/algo/blast/api/dust_filter.cpp [code] | Calls sym dust lib in algo/dustmask and returns CSeq_locs for use by BLAST |
| src/algo/blast/api/dust_filter.hpp [code] | Calls sym dust lib in algo/dustmask and returns CSeq_locs for use by BLAST |
| src/algo/blast/api/effsearchspace_calc.cpp [code] | Defines auxiliary class to calculate the effective search space |
| src/algo/blast/api/local_blast.cpp [code] | |
| src/algo/blast/api/local_db_adapter.cpp [code] | Defines class which provides internal BLAST database representations to the internal BLAST APIs |
| src/algo/blast/api/local_search.cpp [code] | This file implements the Uniform Blast Search Interface in terms of the local BLAST database search class NOTE: This is OBJECT MANAGER DEPENDANT because of its use of CDbBlast! |
| src/algo/blast/api/msa_pssm_input.cpp [code] | Implementation of the concrete strategy to obtain PSSM input data for PSI-BLAST from a multiple sequence alignment |
| src/algo/blast/api/objmgr_query_data.cpp [code] | NOTE: This file contains work in progress and the APIs are likely to change, please do not rely on them until this notice is removed |
| src/algo/blast/api/objmgrfree_query_data.cpp [code] | NOTE: This file contains work in progress and the APIs are likely to change, please do not rely on them until this notice is removed |
| src/algo/blast/api/phiblast_nucl_options.cpp [code] | Implements the CPHIBlastNuclOptionsHandle class |
| src/algo/blast/api/phiblast_prot_options.cpp [code] | Implements the CPHIBlastProtOptionsHandle class |
| src/algo/blast/api/prelim_search_runner.hpp [code] | Defines internal auxiliary functor object to run the preliminary stage of the BLAST search |
| src/algo/blast/api/prelim_stage.cpp [code] | NOTE: This file contains work in progress and the APIs are likely to change, please do not rely on them until this notice is removed |
| src/algo/blast/api/psi_pssm_input.cpp [code] | Implementation of the concrete strategy to obtain PSSM input data for PSI-BLAST |
| src/algo/blast/api/psibl2seq.cpp [code] | Implementation of CPsiBl2Seq |
| src/algo/blast/api/psiblast.cpp [code] | Implementation of CPsiBlast |
| src/algo/blast/api/psiblast_aux_priv.cpp [code] | Definitions of auxiliary functions/classes for PSI-BLAST |
| src/algo/blast/api/psiblast_aux_priv.hpp [code] | Declarations of auxiliary functions/classes for PSI-BLAST |
| src/algo/blast/api/psiblast_impl.cpp [code] | Implements implementation class for PSI-BLAST and PSI-BLAST 2 Sequences |
| src/algo/blast/api/psiblast_impl.hpp [code] | Defines implementation class for PSI-BLAST and PSI-BLAST 2 Sequences |
| src/algo/blast/api/psiblast_iteration.cpp [code] | Defines class which represents the iteration state in PSI-BLAST |
| src/algo/blast/api/psiblast_options.cpp [code] | Implements the CPSIBlastOptionsHandle class |
| src/algo/blast/api/pssm_engine.cpp [code] | Implementation of the C++ API for the PSI-BLAST PSSM generation engine |
| src/algo/blast/api/query_data.cpp [code] | NOTE: This file contains work in progress and the APIs are likely to change, please do not rely on them until this notice is removed |
| src/algo/blast/api/remote_blast.cpp [code] | Queueing and Polling code for Remote Blast API |
| src/algo/blast/api/remote_search.cpp [code] | This file implements the uniform Blast search interface in terms of the blast4 network API via the CRemoteBlast library |
| src/algo/blast/api/repeats_filter_cxx.cpp [code] | C++ version of repeats filtering |
| src/algo/blast/api/rps_aux.cpp [code] | Implements auxiliary classes to manage RPS-BLAST related C-structures |
| src/algo/blast/api/rpstblastn_options.cpp [code] | Implements the CRPSTBlastnOptionsHandle class |
| src/algo/blast/api/seqinfosrc_bioseq.cpp [code] | Implementation of the concrete strategy for an IBlastSeqInfoSrc interface to retrieve sequence identifiers and lengths from a IQueryFactory object |
| src/algo/blast/api/seqinfosrc_bioseq.hpp [code] | Defines a concrete strategy for the IBlastSeqInfoSrc interface for sequence identifiers retrieval from a CBioseq/CBioseq_set object |
| src/algo/blast/api/seqinfosrc_seqdb.cpp [code] | Implementation of the concrete strategy for an IBlastSeqInfoSrc interface to retrieve sequence identifiers and lengths from a BLAST database |
| src/algo/blast/api/seqinfosrc_seqvec.cpp [code] | Implementation of the concrete strategy for an IBlastSeqInfoSrc interface to retrieve sequence identifiers and lengths from a vector of Seq-locs |
| src/algo/blast/api/seqsrc_multiseq.cpp [code] | Implementation of the BlastSeqSrc interface for a vector of sequence locations |
| src/algo/blast/api/seqsrc_query_factory.cpp [code] | Implementation of the BlastSeqSrc interface for a query factory |
| src/algo/blast/api/seqsrc_query_factory.hpp [code] | Implementation of the BlastSeqSrc interface for a query factory |
| src/algo/blast/api/seqsrc_seqdb.cpp [code] | Implementation of the BlastSeqSrc interface for a C++ BLAST databases API |
| src/algo/blast/api/setup_factory.cpp [code] | NOTE: This file contains work in progress and the APIs are likely to change, please do not rely on them until this notice is removed |
| src/algo/blast/api/split_query.hpp [code] | Declares CQuerySplitter, a class to split the query sequence(s) |
| src/algo/blast/api/split_query_aux_priv.cpp [code] | Auxiliary functions and classes to assist in query splitting |
| src/algo/blast/api/split_query_aux_priv.hpp [code] | Auxiliary functions and classes to assist in query splitting |
| src/algo/blast/api/split_query_blk.cpp [code] | Implementation of C++ wrapper for SSplitQueryBlk |
| src/algo/blast/api/split_query_blk.hpp [code] | Definition of C++ wrapper for SSplitQueryBlk |
| src/algo/blast/api/split_query_cxx.cpp [code] | Defines CQuerySplitter, a class to split the query sequence(s) |
| src/algo/blast/api/subj_ranges_set.cpp [code] | Defines classes to maintain lists of subject offset ranges in sequence data for targetted retrieval during the traceback stage |
| src/algo/blast/api/tblastn_options.cpp [code] | Implements the CTBlastnOptionsHandle class |
| src/algo/blast/api/tblastx_options.cpp [code] | Implements the CTBlastxOptionsHandle class |
| src/algo/blast/api/traceback_stage.cpp [code] | NOTE: This file contains work in progress and the APIs are likely to change, please do not rely on them until this notice is removed |
| src/algo/blast/api/uniform_search.cpp [code] | Implementation of the uniform BLAST search interface auxiliary classes |
| src/algo/blast/api/version.cpp [code] | |
| src/algo/blast/api/winmask_filter.cpp [code] | Blast wrappers for WindowMasker filtering |
| src/algo/blast/api/winmask_filter.hpp [code] | Blast wrappers for WindowMasker filtering |
| src/algo/blast/blastinput/blast_args.cpp [code] | Convert blast-related command line arguments into blast options |
| src/algo/blast/blastinput/blast_fasta_input.cpp [code] | Convert FASTA-formatted files into blast sequence input |
| src/algo/blast/blastinput/blast_input.cpp [code] | Convert sources of sequence data into blast sequence input |
| src/algo/blast/blastinput/blast_input_aux.cpp [code] | Auxiliary functions for BLAST input library |
| src/algo/blast/blastinput/blast_scope_src.cpp [code] | Defines CBlastScopeSource class to create properly configured CScope objects |
| src/algo/blast/blastinput/blastn_args.cpp [code] | Implementation of the BLASTN command line arguments |
| src/algo/blast/blastinput/blastp_args.cpp [code] | Implementation of the BLASTP command line arguments |
| src/algo/blast/blastinput/blastx_args.cpp [code] | Implementation of the BLASTX command line arguments |
| src/algo/blast/blastinput/cmdline_flags.cpp [code] | Constant definitions for command line arguments for BLAST programs |
| src/algo/blast/blastinput/psiblast_args.cpp [code] | Implementation of the PSI-BLAST command line arguments |
| src/algo/blast/blastinput/rpsblast_args.cpp [code] | Implementation of the RPSBLAST command line arguments |
| src/algo/blast/blastinput/rpstblastn_args.cpp [code] | Implementation of the RPSTBLASTN command line arguments |
| src/algo/blast/blastinput/tblastn_args.cpp [code] | Implementation of the TBLASTN command line arguments |
| src/algo/blast/blastinput/tblastx_args.cpp [code] | Implementation of the TBLASTX command line arguments |
| src/algo/blast/blastinput/demo/blastinput_demo.cpp [code] | Demonstration application of the sequence input functionality of the blastinput library |
| src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp [code] | |
| src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp [code] | |
| src/algo/blast/composition_adjustment/compo_heap.c [code] | Defines a "heap" data structure that is used to store computed alignments when composition adjustment of scoring matrices is used |
| src/algo/blast/composition_adjustment/compo_mode_condition.c [code] | Functions to test whether conditional score matrix adjustment should be applied for a pair of matching sequences |
| src/algo/blast/composition_adjustment/composition_adjustment.c [code] | Highest level functions to solve the optimization problem for compositional score matrix adjustment |
| src/algo/blast/composition_adjustment/matrix_frequency_data.c [code] | Joint probabilities for specific matrices |
| src/algo/blast/composition_adjustment/nlm_linear_algebra.c [code] | Basic matrix and vector operations |
| src/algo/blast/composition_adjustment/optimize_target_freq.c [code] | Routines for finding an optimal set of target frequencies for the purpose of generating a compositionally adjusted score matrix |
| src/algo/blast/composition_adjustment/redo_alignment.c [code] | Routines for redoing a set of alignments, using either composition matrix adjustment or the Smith-Waterman algorithm (or both |
| src/algo/blast/composition_adjustment/smith_waterman.c [code] | Routines for computing rigorous, Smith-Waterman alignments |
| src/algo/blast/composition_adjustment/unified_pvalues.c [code] | Procedures for computing a "composition" p-value of a match, and for computing a unified p-value combining the customary alignment p-value and the new composition p-value |
| src/algo/blast/core/aa_ungapped.c [code] | Functions to iterate over seed hits and perform ungapped extensions |
| src/algo/blast/core/blast_aalookup.c [code] | Functions interacting with the protein BLAST lookup table |
| src/algo/blast/core/blast_aascan.c [code] | Functions for accessing hits in the protein BLAST lookup table |
| src/algo/blast/core/blast_diagnostics.c [code] | Manipulating diagnostics data returned from BLAST |
| src/algo/blast/core/blast_dynarray.c [code] | Definitions for various dynamic array types |
| src/algo/blast/core/blast_dynarray.h [code] | Declarations for various dynamic array types |
| src/algo/blast/core/blast_encoding.c [code] | Definitions of static arrays defined in blast_encoding.h |
| src/algo/blast/core/blast_engine.c [code] | Function calls to actually perform a BLAST search (high level) |
| src/algo/blast/core/blast_extend.c [code] | Functions to initialize structures used for BLAST extension |
| src/algo/blast/core/blast_filter.c [code] | All code related to query sequence masking/filtering for BLAST |
| src/algo/blast/core/blast_gapalign.c [code] | Functions to perform gapped alignment |
| src/algo/blast/core/blast_gapalign_priv.h [code] | Private interface for blast_gapalign.c |
| src/algo/blast/core/blast_hits.c [code] | BLAST functions for saving hits after the (preliminary) gapped alignment |
| src/algo/blast/core/blast_hits_priv.h [code] | Utilities for dealing with BLAST HSPs in the core of BLAST |
| src/algo/blast/core/blast_hspstream.c [code] | BlastHSPStream is used to save hits from preliminary stage and pass on to the traceback stage |
| src/algo/blast/core/blast_itree.c [code] | Functions that implement an interval tree for fast HSP containment tests |
| src/algo/blast/core/blast_itree.h [code] | Interface for an interval tree, used for fast HSP containment tests |
| src/algo/blast/core/blast_kappa.c [code] | Utilities for doing Smith-Waterman alignments and adjusting the scoring system for each match in blastpgp |
| src/algo/blast/core/blast_lookup.c [code] | Functions that provide generic services for BLAST lookup tables |
| src/algo/blast/core/blast_message.c [code] | These functions provide access to Blast_Message objects, used by the BLAST code as a wrapper for error and warning messages |
| src/algo/blast/core/blast_nalookup.c [code] | Functions for constructing nucleotide blast lookup tables |
| src/algo/blast/core/blast_nascan.c [code] | Functions for scanning nucleotide BLAST lookup tables |
| src/algo/blast/core/blast_options.c [code] | The structures and functions in blast_options |
| src/algo/blast/core/blast_parameters.c [code] | Definitions for functions dealing with BLAST CORE parameter structures |
| src/algo/blast/core/blast_posit.c [code] | Port of posit.c/posit2.c to implement composition based statistics for PSI-BLAST |
| src/algo/blast/core/blast_posit.h [code] | Port of posit.h structures and impalaScaling for implementing composition based statistics for PSI-BLAST |
| src/algo/blast/core/blast_program.c [code] | Implementation auxiliary functions to determine traits of the various BLAST programs supported by core BLAST |
| src/algo/blast/core/blast_psi.c [code] | Implementation of the high level functions of PSI-BLAST's PSSM engine |
| src/algo/blast/core/blast_psi_priv.c [code] | Defintions for functions in private interface for Position Iterated BLAST API |
| src/algo/blast/core/blast_psi_priv.h [code] | Private interface for Position Iterated BLAST API, contains the PSSM generation engine |
| src/algo/blast/core/blast_query_info.c [code] | Functions to manipulate the BlastQueryInfo structure |
| src/algo/blast/core/blast_seg.c [code] | A utility to find low complexity AA regions |
| src/algo/blast/core/blast_seqsrc.c [code] | Definition of ADT to retrieve sequences for the BLAST engine and low level details of the implementation of the BlastSeqSrc framework |
| src/algo/blast/core/blast_setup.c [code] | Utilities initialize/setup BLAST |
| src/algo/blast/core/blast_stat.c [code] | Functions to calculate BLAST probabilities etc |
| src/algo/blast/core/blast_sw.c [code] | Smith-Waterman gapped alignment, for use with infrastructure of BLAST |
| src/algo/blast/core/blast_traceback.c [code] | Functions responsible for the traceback stage of the BLAST algorithm |
| src/algo/blast/core/blast_tune.c [code] | Routines that compute a blastn word size appropriate for finding, with high probability, alignments with specified length and percent identity |
| src/algo/blast/core/blast_util.c [code] | Various BLAST utilities |
| src/algo/blast/core/gapinfo.c [code] | Initialization and freeing of structures containing traceback information |
| src/algo/blast/core/gencode_singleton.c [code] | Implementation of the genetic code singleton |
| src/algo/blast/core/greedy_align.c [code] | Functions to perform greedy affine and non-affine gapped alignment |
| src/algo/blast/core/hspfilter_besthit.c [code] | Implementation of the BlastHSPWriter interface to save only best hits from a BLAST search, and subsequently return them in sorted order |
| src/algo/blast/core/hspfilter_collector.c [code] | Default implementation of the BlastHSPWriter interface to save hits from a BLAST search, and subsequently return them in sorted order |
| src/algo/blast/core/hspfilter_culling.c [code] | Implementation of the BlastHSPWriter interface to perform culling |
| src/algo/blast/core/index_ungapped.c [code] | Definitions of functions needed to implement diagonal hash to support ungapped extensions for indexed version of megablast |
| src/algo/blast/core/index_ungapped.h [code] | Declarations of structures needed to implement diagonal hash to support ungapped extensions for indexed version of megablast |
| src/algo/blast/core/link_hsps.c [code] | Functions to link with use of sum statistics |
| src/algo/blast/core/ |