Display Settings:

Format

Send to:

Choose Destination
We are sorry, but NCBI web applications do not support your browser and may not function properly. More information
HomoloGene:20335. Gene conserved in Euteleostomi Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

   CDH13,  H.sapiens
cadherin 13
    NP_001207417.1
760 aa
   CDH13,  P.troglodytes
cadherin 13, H-cadherin (heart)
    XP_001149641.1
760 aa
   CDH13,  M.mulatta
cadherin 13, H-cadherin (heart)
    XP_001110233.1
760 aa
   CDH13,  C.lupus
cadherin 13
    XP_546809.3
713 aa
   CDH13,  B.taurus
cadherin 13, H-cadherin (heart)
    NP_001030354.1
713 aa
   Cdh13,  M.musculus
cadherin 13
    NP_062681.2
714 aa
   Cdh13,  R.norvegicus
cadherin 13
    NP_620244.1
714 aa
   CDH13,  G.gallus
cadherin 13, H-cadherin (heart)
    NP_001001760.1
717 aa
   cdh13,  X.tropicalis
cadherin 13
    NP_001096548.1
713 aa
   cdh13,  D.rerio
cadherin 13, H-cadherin (heart)
    XP_687082.6
696 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Publications
Articles associated with genes and sequences of this homology group.

T-cadherin loss promotes experimental metastasis of squamous cell carcinoma.
Philippova M, et al. Eur J Cancer 49, 2048-58 (2013).
Decreased expression of T-cadherin is associated with gastric cancer prognosis.
Tang Y, et al. Hepatogastroenterology 59, 1294-8 (2012).
[Aberrant methylation of T-cadherin gene in human esophageal carcinoma cells].
Jing Z, et al. Zhonghua Yi Xue Za Zhi 91, 2653-6 (2011).



Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
Cadherin_pro (pfam08758)
  Cadherin prodomain like.
CA_like (cl15786)
  Cadherin repeat-like domain.
Cadherin_pro (cl07391)
  Cadherin prodomain like.
CA_like (cl15786)
  Cadherin repeat-like domain.



Related Homology Resources
Links to curated and computed homology information found in other databases.
Orthology group for M.musculus Cdh13 includes H.sapiens CDH13 and R.norvegicus Cdh13.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Chordata
Mammalia - mammals (14 transcripts, 13 species)
Amphibia - amphibians (3 transcripts, 2 species)
Aves - birds (2 transcripts, 2 species)
Actinopterygii - bony fishes (1 transcript, 1 species)

 

 

 

Write to the Help Desk