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HomoloGene:21216. Gene conserved in Euteleostomi Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

   ARID1A,  H.sapiens
AT rich interactive domain 1A (SWI-like)
    NP_006006.3
2285 aa
   ARID1A,  P.troglodytes
AT rich interactive domain 1A (SWI-like)
    XP_513235.4
2285 aa
   LOC719949,  M.mulatta
AT-rich interactive domain-containing protein 1A-like
    XP_002808326.1
2224 aa
   ARID1A,  C.lupus
AT rich interactive domain 1A (SWI-like)
    XP_005617799.1
2285 aa
   ARID1A,  B.taurus
AT rich interactive domain 1A (SWI-like)
    NP_001192714.1
2286 aa
   Arid1a,  M.musculus
AT rich interactive domain 1A (SWI-like)
    NP_001074288.1
2283 aa
   Arid1a,  R.norvegicus
AT rich interactive domain 1A (SWI-like)
    NP_001100105.1
1911 aa
   ARID1A,  G.gallus
AT rich interactive domain 1A (SWI-like)
    XP_417693.4
1350 aa
   arid1a,  X.tropicalis
AT rich interactive domain 1A (SWI-like)
    XP_002934685.2
2053 aa
   arid1ab,  D.rerio
AT rich interactive domain 1Ab (SWI-like)
    XP_696565.6
2261 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Phenotypes
Phenotypic information for the genes in this entry imported from model organism databases.

H.sapiens
???.



Publications
Articles associated with genes and sequences of this homology group.




Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
DUF3518 (pfam12031)
  Domain of unknown function (DUF3518).
ARID (pfam01388)
  ARID/BRIGHT DNA binding domain.
SOG2 (pfam10428)
  RAM signalling pathway protein.
ARID (cl02633)
  ARID/BRIGHT DNA binding domain.



Related Homology Resources
Links to curated and computed homology information found in other databases.
Orthology group for M.musculus Arid1a includes H.sapiens ARID1A and R.norvegicus Arid1a.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Chordata
Mammalia - mammals (17 transcripts, 10 species)
Actinopterygii - bony fishes (16 transcripts, 8 species)
Aves - birds (5 transcripts, 2 species)
Amphibia - amphibians (3 transcripts, 2 species)
Ascidiacea - tunicates (2 transcripts, 2 species)
Cephalochordata - lancelets (1 transcript, 1 species)

Arthropoda
Insecta - insects (8 transcripts, 7 species)

Mollusca
Gastropoda - gastropods (2 transcripts, 2 species)

Annelida
Polychaeta - segmented worms (1 transcript, 1 species)
Hirudinida - segmented worms (1 transcript, 1 species)

Echinodermata
Echinoidea - sea urchins (2 transcripts, 1 species)

 

 

 

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