Display Settings:

Format

Send to:

Choose Destination
We are sorry, but NCBI web applications do not support your browser and may not function properly. More information
HomoloGene:6441. Gene conserved in Eukaryota Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

   RAD5,  S.cerevisiae
RAD5
    NP_013132.1
1169 aa
   KLLA0F17479g,  K.lactis
KLLA0F17479g
    XP_455865.1
1114 aa
   AGOS_AFR220W,  E.gossypii
AGOS_AFR220W
    NP_985767.2
1085 aa
   rad8,  S.pombe
rad8
    XP_001713034.1
1133 aa
   MGG_05032,  M.oryzae
MGG_05032
    XP_003712540.1
1166 aa
   NCU09516,  N.crassa
NCU09516
    XP_958511.1
1175 aa
   RAD5,  A.thaliana
RAD5
    NP_197667.1
1029 aa
   Os02g0527100,  O.sativa
Os02g0527100
    NP_001047001.1
810 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Publications
Articles associated with genes and sequences of this homology group.

Length-dependent processing of telomeres in the absence of telomerase.
Fallet E, et al. Nucleic Acids Res 42, 3648-65 (2014).



Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
zf-C3HC4_2 (pfam13923)
  Zinc finger, C3HC4 type (RING finger).
SNF2_N (pfam00176)
  SNF2 family N-terminal domain.
HepA (COG0553)
  Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair].
HELICc (cd00079)
  Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
SNF2_N (pfam00176)
  SNF2 family N-terminal domain.
UBA_4 (pfam14555)
  UBA-like domain.
HIRAN (cl07418)
  HIRAN domain.
RING (cl17238)
  RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably ...
DEXDc (cl17251)
  DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Streptophyta
Eudicotyledons - eudicots (9 transcripts, 6 species)
Liliopsida - monocots (6 transcripts, 5 species)
Isoetopsida - club-mosses (3 transcripts, 1 species)

Ascomycota
Sordariomycetes - ascomycetes (1 transcript, 1 species)
Eurotiomycetes - ascomycetes (1 transcript, 1 species)

Basidiomycota
Heterobasidiomycetes - basidiomycetes (1 transcript, 1 species)

 

 

 

Write to the Help Desk