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HomoloGene:57086. Gene conserved in Euteleostomi Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

   RRP1B,  H.sapiens
ribosomal RNA processing 1B
    NP_055871.1
758 aa
   RRP1B,  P.troglodytes
ribosomal RNA processing 1 homolog B (S. cerevisiae)
    XP_001144331.1
758 aa
   RRP1B,  M.mulatta
ribosomal RNA processing 1 homolog B (S. cerevisiae)
    XP_001104749.2
725 aa
   RRP1B,  C.lupus
ribosomal RNA processing 1B
    XP_005639011.1
702 aa
   RRP1B,  B.taurus
ribosomal RNA processing 1B
    XP_002685189.1
737 aa
   Rrp1b,  M.musculus
ribosomal RNA processing 1 homolog B (S. cerevisiae)
    NP_082520.2
724 aa
   Rrp1b,  R.norvegicus
ribosomal RNA processing 1B
    XP_228076.4
733 aa
   RRP1B,  G.gallus
ribosomal RNA processing 1 homolog B (S. cerevisiae)
    NP_001026505.1
755 aa
   rrp1b,  X.tropicalis
ribosomal RNA processing 1B
    NP_001015923.1
612 aa
   rrp1,  D.rerio
ribosomal RNA processing 1 homolog (S. cerevisiae)
    XP_003199207.2
647 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Publications
Articles associated with genes and sequences of this homology group.

Regulation of E2F1-induced apoptosis by the nucleolar protein RRP1B.
Paik JC, et al. J Biol Chem 285, 6348-63 (2010).
Evolutionary breakpoints on human chromosome 21.
Davisson MT, et al. Genomics 78, 99-106 (2001).
Identification of UHRF1/2 as new N-methylpurine DNA glycosylase-interacting proteins.
Liang C, et al. Biochem Biophys Res Commun 433, 415-9 (2013).



Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
Nop52 (pfam05997)
  Nucleolar protein,Nop52.
Nop52 (pfam05997)
  Nucleolar protein,Nop52.
RFX5_DNA_bdg (pfam14621)
  RFX5 DNA-binding domain.
DUF4584 (pfam15223)
  Domain of unknown function (DUF4584).



Related Homology Resources
Links to curated and computed homology information found in other databases.
Orthology group for M.musculus Rrp1b includes H.sapiens RRP1B and R.norvegicus Rrp1b.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Chordata
Mammalia - mammals (6 transcripts, 5 species)
Amniota - vertebrates (1 transcript, 1 species)
Aves - birds (1 transcript, 1 species)

Nematoda
Chromadorea - nematodes (2 transcripts, 2 species)

Arthropoda
Insecta - insects (1 transcript, 1 species)

Echinodermata
Echinoidea - sea urchins (1 transcript, 1 species)

Streptophyta
Liliopsida - monocots (6 transcripts, 5 species)
Eudicotyledons - eudicots (5 transcripts, 5 species)

 

 

 

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