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HomoloGene:68426. Gene conserved in Eukaryota Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

   HDAC1,  H.sapiens
histone deacetylase 1
    NP_004955.2
482 aa
   HDAC1,  P.troglodytes
histone deacetylase 1
    XP_519834.2
482 aa
   HDAC1,  P.troglodytes
histone deacetylase 1
    XP_001163573.2
482 aa
   LOC708441,  M.mulatta
histone deacetylase 1-like
    XP_001096929.2
518 aa
   HDAC1,  C.lupus
histone deacetylase 1
    XP_544435.2
482 aa
   HDAC1,  B.taurus
histone deacetylase 1
    NP_001032521.1
482 aa
   Hdac1,  M.musculus
histone deacetylase 1
    NP_032254.1
482 aa
   Hdac1,  R.norvegicus
histone deacetylase 1
    NP_001020580.1
482 aa
   HDAC1,  G.gallus
histone deacetylase 1
    NP_989487.1
480 aa
   hdac1,  X.tropicalis
histone deacetylase 1
    NP_001025564.1
480 aa
   Rpd3,  D.melanogaster
Rpd3
    NP_647918.2
521 aa
   AgaP_AGAP006511,  A.gambiae
AgaP_AGAP006511
    XP_316539.2
470 aa
   hda-3,  C.elegans
hda-3
    NP_493026.1
465 aa
   RPD3,  S.cerevisiae
RPD3
    NP_014069.1
433 aa
   KLLA0E01981g,  K.lactis
KLLA0E01981g
    XP_454037.1
432 aa
   AGOS_AGR395W,  E.gossypii
AGOS_AGR395W
    NP_987061.1
433 aa
   clr6,  S.pombe
clr6
    NP_595333.1
405 aa
   MGG_05857,  M.oryzae
MGG_05857
    XP_003711681.1
659 aa
   NCU00824,  N.crassa
NCU00824
    XP_964367.1
646 aa
   HD1,  A.thaliana
HD1
    NP_195526.1
501 aa
   Os06g0583400,  O.sativa
Os06g0583400
    NP_001057943.1
518 aa
   Os02g0214900,  O.sativa
Os02g0214900
    NP_001046284.1
510 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Publications
Articles associated with genes and sequences of this homology group.

HDAC1 regulates fear extinction in mice.
Bahari-Javan S, et al. J Neurosci 32, 5062-73 (2012).



Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
Arginase_HDAC (cl17011)
  Arginase-like and histone-like hydrolases.
Arginase_HDAC (cl17011)
  Arginase-like and histone-like hydrolases.



Related Homology Resources
Links to curated and computed homology information found in other databases.
Orthology group for M.musculus Hdac1 includes H.sapiens HDAC1 and R.norvegicus Hdac1.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Chordata
Mammalia - mammals (26 transcripts, 15 species)
Actinopterygii - bony fishes (19 transcripts, 9 species)
Amphibia - amphibians (4 transcripts, 2 species)
Ascidiacea - tunicates (3 transcripts, 3 species)
Aves - birds (1 transcript, 1 species)
Cephalochordata - lancelets (1 transcript, 1 species)
Hyperoartia - vertebrates (1 transcript, 1 species)

Arthropoda
Insecta - insects (11 transcripts, 11 species)
Arachnida - arachnids (3 transcripts, 2 species)
Branchiopoda - crustaceans (1 transcript, 1 species)

Nematoda
Chromadorea - nematodes (3 transcripts, 2 species)

Mollusca
Gastropoda - gastropods (2 transcripts, 2 species)

Cnidaria
Hydrozoa - hydrozoans (1 transcript, 1 species)
Anthozoa - anthozoans (1 transcript, 1 species)

Porifera
Demospongiae - sponges (2 transcripts, 1 species)

Platyhelminthes
Trematoda - flatworms (2 transcripts, 2 species)

Annelida
Polychaeta - segmented worms (1 transcript, 1 species)
Hirudinida - segmented worms (1 transcript, 1 species)

Echinodermata
Echinoidea - sea urchins (2 transcripts, 2 species)

Streptophyta
Eudicotyledons - eudicots (21 transcripts, 19 species)
Liliopsida - monocots (11 transcripts, 7 species)
Coniferopsida - conifers (2 transcripts, 2 species)
Bryopsida - mosses (1 transcript, 1 species)

Ascomycota
Sordariomycetes - ascomycetes (2 transcripts, 1 species)
Eurotiomycetes - ascomycetes (1 transcript, 1 species)
Pezizomycetes - ascomycetes (1 transcript, 1 species)

Basidiomycota
Heterobasidiomycetes - basidiomycetes (3 transcripts, 1 species)

Oomycetes
Peronosporales - oomycetes (3 transcripts, 1 species)
Pythiales - oomycetes (1 transcript, 1 species)

Bacillariophyta
Bacillariophyceae - diatoms (2 transcripts, 1 species)

Ciliophora
Oligohymenophorea - ciliates (3 transcripts, 1 species)

Apicomplexa
Coccidia - apicomplexans (1 transcript, 1 species)

Dictyosteliida
Dictyostelium - cellular slime molds (1 transcript, 1 species)

Codonosigidae
Monosiga - choanoflagellates (1 transcript, 1 species)

 

 

 

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