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HomoloGene:12920. Gene conserved in Euteleostomi Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

   TRPV1,  H.sapiens
transient receptor potential cation channel, subfamily V, member 1
    NP_061197.4
839 aa
   TRPV1,  P.troglodytes
transient receptor potential cation channel, subfamily V, member 1
    XP_003315345.1
780 aa
   TRPV1,  M.mulatta
transient receptor potential cation channel, subfamily V, member 1
    XP_001117609.1
813 aa
   TRPV1,  C.lupus
transient receptor potential cation channel, subfamily V, member 1
    NP_001003970.1
840 aa
   TRPV1,  B.taurus
transient receptor potential cation channel, subfamily V, member 1
    XP_005220314.1
864 aa
   Trpv1,  M.musculus
transient receptor potential cation channel, subfamily V, member 1
    NP_001001445.1
839 aa
   Trpv1,  R.norvegicus
transient receptor potential cation channel, subfamily V, member 1
    NP_114188.1
838 aa
   TRPV1,  G.gallus
transient receptor potential cation channel, subfamily V, member 1
    NP_989903.1
843 aa
   trpv1,  X.tropicalis
transient receptor potential cation channel subfamily V member 1
    NP_001243521.1
840 aa
   trpv1,  D.rerio
transient receptor potential cation channel, subfamily V, member 1
    NP_001119871.1
813 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Publications
Articles associated with genes and sequences of this homology group.




Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
Ion_trans (pfam00520)
  Ion transport protein.
PKD_channel (pfam08016)
  Polycystin cation channel.
ANK (cd00204)
  ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
EcsB (cl11542)
  Bacterial ABC transporter protein EcsB.



Related Homology Resources
Links to curated and computed homology information found in other databases.
Orthology group for M.musculus Trpv1 includes H.sapiens TRPV1 and R.norvegicus Trpv1.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Chordata
Mammalia - mammals (10 transcripts, 10 species)
Aves - birds (2 transcripts, 2 species)
Actinopterygii - bony fishes (1 transcript, 1 species)
Amphibia - amphibians (1 transcript, 1 species)

 

 

 

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