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HomoloGene:56745. Gene conserved in Tetrapoda Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

   COPG1,  H.sapiens
coatomer protein complex, subunit gamma 1
    NP_057212.1
874 aa
   COPG1,  P.troglodytes
coatomer protein complex, subunit gamma 1
    XP_001141317.1
874 aa
   LOC705387,  M.mulatta
coatomer subunit gamma-like
    XP_002798755.1
610 aa
   COPG1,  C.lupus
coatomer protein complex, subunit gamma 1
    XP_533723.2
874 aa
   COPG1,  B.taurus
coatomer protein complex, subunit gamma
    NP_001032904.1
874 aa
   Copg1,  M.musculus
coatomer protein complex, subunit gamma 1
    NP_059505.1
874 aa
   Copg1,  R.norvegicus
coatomer protein complex, subunit gamma 1
    NP_001026992.1
874 aa
   COPG,  G.gallus
coatomer protein complex, subunit gamma
    NP_001025768.1
874 aa
   copg1,  X.tropicalis
coatomer protein complex, subunit gamma 1
    NP_989174.1
874 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Publications
Articles associated with genes and sequences of this homology group.

Gamma-COP appendage domain - structure and function.
Watson PJ, et al. Traffic 5, 79-88 (2004).
Differential localization of coatomer complex isoforms within the Golgi apparatus.
Moelleken J, et al. Proc Natl Acad Sci U S A 104, 4425-30 (2007).



Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
Gamma-COP (pfam08752)
  Coatomer gamma subunit appendage domain.
SEC21 (COG5240)
  Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion].
Adaptin_N (pfam01602)
  Adaptin N terminal region.
COP-gamma_platf (pfam08752)
  Coatomer gamma subunit appendage platform subdomain.
HEAT_EZ (cl02500)
  The HEAT repeat family is related to armadillo/beta-catenin-like repeats (see pfam00514). These EZ repeats are found in subunits of cyanobacterial phycocyanin lyase and other proteins and probably carry out a scaffolding role.



Related Homology Resources
Links to curated and computed homology information found in other databases.
Orthology group for M.musculus Copg1 includes H.sapiens COPG1.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Chordata
Mammalia - mammals (20 transcripts, 15 species)
Ascidiacea - tunicates (4 transcripts, 3 species)
Actinopterygii - bony fishes (2 transcripts, 2 species)
Aves - birds (2 transcripts, 2 species)
Amphibia - amphibians (2 transcripts, 2 species)
Amniota - vertebrates (1 transcript, 1 species)

Arthropoda
Insecta - insects (2 transcripts, 2 species)

Cnidaria
Hydrozoa - hydrozoans (1 transcript, 1 species)
Anthozoa - anthozoans (1 transcript, 1 species)

Echinodermata
Echinoidea - sea urchins (2 transcripts, 1 species)

Annelida
Polychaeta - segmented worms (1 transcript, 1 species)

Streptophyta
Eudicotyledons - eudicots (4 transcripts, 4 species)

Ascomycota
Sordariomycetes - ascomycetes (1 transcript, 1 species)

Bacillariophyta
Bacillariophyceae - diatoms (1 transcript, 1 species)

 

 

 

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