Display Settings:

Format

Send to:

Choose Destination
We are sorry, but NCBI web applications do not support your browser and may not function properly. More information
HomoloGene:9562. Gene conserved in Euteleostomi Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

   PEX5L,  H.sapiens
peroxisomal biogenesis factor 5-like
    NP_001243679.1
624 aa
   PEX5L,  P.troglodytes
peroxisomal biogenesis factor 5-like
    XP_001168616.1
626 aa
   PEX5L,  M.mulatta
peroxisomal biogenesis factor 5-like
    XP_001107401.1
624 aa
   PEX5L,  C.lupus
peroxisomal biogenesis factor 5-like
    XP_005639796.1
672 aa
   PEX5L,  B.taurus
peroxisomal biogenesis factor 5-like
    NP_001069411.1
564 aa
   Pex5l,  M.musculus
peroxisomal biogenesis factor 5-like
    NP_067458.2
615 aa
   Pex5l,  R.norvegicus
peroxisomal biogenesis factor 5-like
    NP_775175.1
602 aa
   PEX5L,  G.gallus
peroxisomal biogenesis factor 5-like
    XP_004943508.1
632 aa
   pex5l,  X.tropicalis
peroxisomal biogenesis factor 5-like
    XP_002931623.2
600 aa
   pex5la,  D.rerio
peroxisomal biogenesis factor 5-like a
    XP_685057.5
597 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Publications
Articles associated with genes and sequences of this homology group.

Association of adaptor protein TRIP8b with clathrin.
Popova NV, et al. J Neurochem 118, 988-98 (2011).
Analysis of proteins interacting with TRIP8b adapter.
Popova NV, et al. Biochemistry (Mosc) 73, 644-51 (2008).



Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
TPR (cd00189)
  Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, ...



Related Homology Resources
Links to curated and computed homology information found in other databases.
Orthology group for M.musculus Pex5l includes H.sapiens PEX5L and R.norvegicus Pex5l.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Chordata
Mammalia - mammals (8 transcripts, 7 species)
Amniota - vertebrates (2 transcripts, 1 species)
Actinopterygii - bony fishes (2 transcripts, 2 species)
Ascidiacea - tunicates (1 transcript, 1 species)
Amphibia - amphibians (1 transcript, 1 species)

Arthropoda
Insecta - insects (4 transcripts, 4 species)
Arachnida - arachnids (1 transcript, 1 species)
Branchiopoda - crustaceans (1 transcript, 1 species)

Annelida
Polychaeta - segmented worms (1 transcript, 1 species)
Hirudinida - segmented worms (1 transcript, 1 species)

Cnidaria
Hydrozoa - hydrozoans (1 transcript, 1 species)

Codonosigidae
Monosiga - choanoflagellates (1 transcript, 1 species)

 

 

 

Write to the Help Desk