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Sample GSM48161 Query DataSets for GSM48161
Status Public on Apr 29, 2005
Title Genome wide transcriptional oscillation gates DNA replication AFFY3_35
Sample type RNA
 
Source name time series sampling continuous gated synchrony yeast culture
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
Description Time series , cycle 3, sample 35, phase 48.7 degrees
This sample is also known as AFFY3_35.
Sample_strain: IFO 0233 diploid
Keywords = oscillation, attractor, DNA-replication, redox gating, quantized,
 
Submission date Apr 12, 2005
Last update date May 27, 2005
Contact name Robert R Klevecz
E-mail(s) rklevecz@coh.org
Phone 6263018348
Organization name Beckman Research Institute of the City of Hope
Department Biology
Lab Cellular Dynamics
Street address 1450 E. Duarte Rd.
City Duarte
State/province CA
ZIP/Postal code 91010
Country USA
 
Platform ID GPL90
Series (1)
GSE2583 Genome_Wide_Oscillations_in_Yeast

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-MurIL2_at 5.8 A 0.783476
AFFX-MurIL10_at 1.7 A 0.9273
AFFX-MurIL4_at 2.1 A 0.883887
AFFX-MurFAS_at 10.5 A 0.5
AFFX-BioB-5_at 174.3 P 0.00762
AFFX-BioB-M_at 178.2 P 0.00007
AFFX-BioB-3_at 174.9 P 0.002023
AFFX-BioC-5_at 302.2 P 0.00141
AFFX-BioC-3_at 247.7 P 0.00039
AFFX-BioDn-5_at 281.6 P 0.000052
AFFX-BioDn-3_at 1837.2 P 0.000052
AFFX-CreX-5_at 3959.4 P 0.000044
AFFX-CreX-3_at 5701.1 P 0.000044
AFFX-BioB-5_st 5.9 A 0.559354
AFFX-BioB-M_st 14.6 A 0.631562
AFFX-BioB-3_st 10.1 A 0.760937
AFFX-BioC-5_st 8.1 A 0.834139
AFFX-BioC-3_st 3 A 0.772364
AFFX-BioDn-5_st 22.3 A 0.559354
AFFX-BioDn-3_st 41.2 P 0.039661

Total number of rows: 9335

Table truncated, full table size 226 Kbytes.




Supplementary data files not provided

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