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Sample GSM36875 Query DataSets for GSM36875
Status Public on Feb 23, 2005
Title Wang669-2_JA-37
Sample type RNA
 
Source name Breast
Organism Homo sapiens
Characteristics bone relapses (1=yes, 0=no): 0
Extracted molecule total RNA
 
Description RNA was extracted from a fresh-frozen primary breast tumor. Target cRNA was prepared and hybridized using standard Affymetrix procedures. Image was globally scaled to a target intensity of 600.
 
Submission date Dec 03, 2004
Last update date May 31, 2013
Contact name Tim Jatkoe
E-mail(s) tjatkoe@vrxus.jnj.com
Phone (858) 320-3315
Organization name Veridex
Street address
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL96
Series (1)
GSE2034 Breast cancer relapse free survival
Relations
Reanalyzed by GSE47561

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1166.2 P 0.001248
AFFX-BioB-M_at 2322.7 P 0.000044
AFFX-BioB-3_at 1472.7 P 0.000060
AFFX-BioC-5_at 2529.3 P 0.000127
AFFX-BioC-3_at 2453.0 P 0.000070
AFFX-BioDn-5_at 2806.4 P 0.000044
AFFX-BioDn-3_at 14152.6 P 0.000044
AFFX-CreX-5_at 24469.4 P 0.000044
AFFX-CreX-3_at 36974.9 P 0.000044
AFFX-DapX-5_at 91.0 A 0.078002
AFFX-DapX-M_at 150.3 A 0.354453
AFFX-DapX-3_at 11.0 A 0.979978
AFFX-LysX-5_at 4.3 A 0.868639
AFFX-LysX-M_at 48.9 A 0.455413
AFFX-LysX-3_at 51.0 A 0.262827
AFFX-PheX-5_at 11.7 A 0.783476
AFFX-PheX-M_at 8.5 A 0.737173
AFFX-PheX-3_at 77.6 A 0.574038
AFFX-ThrX-5_at 22.5 A 0.659339
AFFX-ThrX-M_at 39.0 A 0.814869

Total number of rows: 22283

Table truncated, full table size 604 Kbytes.




Supplementary file Size Download File type/resource
GSM36875.CEL.gz 3.3 Mb (ftp)(http) CEL

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