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Sample GSM325796 Query DataSets for GSM325796
Status Public on Oct 03, 2008
Title Cecum - 423078
Sample type RNA
 
Source name Cecum
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.2
Patient Age: 70-79
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: No
Family History of Cancer?: Yes
Screening studies performed?: No
Diagnosis made by: Colonoscopy
Pathological T: 4
Pathological N: 2
Pathological M: 0
Pathological Stage: 3C
Pathological Grade: 2
Pathological Multiple Tumors: No
Pathological Stage During or Following Multimodality Therapy: No
Pathological Dukes Stage: C
Primary Site: Colon
Histology: Adenocarcinoma
 
Submission date Oct 01, 2008
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2081.3 P 0.000127
AFFX-BioB-M_at 3325.5 P 0.000044
AFFX-BioB-3_at 1768.5 P 0.000044
AFFX-BioC-5_at 5108.6 P 0.000052
AFFX-BioC-3_at 7444.6 P 0.000044
AFFX-BioDn-5_at 12427.6 P 0.000044
AFFX-BioDn-3_at 17863.4 P 0.000044
AFFX-CreX-5_at 54495.2 P 0.000052
AFFX-CreX-3_at 60461.5 P 0.000044
AFFX-DapX-5_at 3522.8 P 0.000044
AFFX-DapX-M_at 6147.1 P 0.000127
AFFX-DapX-3_at 8987.9 P 0.000044
AFFX-LysX-5_at 361.7 P 0.000052
AFFX-LysX-M_at 751.8 P 0.000754
AFFX-LysX-3_at 1444.6 P 0.000044
AFFX-PheX-5_at 533.5 P 0.000044
AFFX-PheX-M_at 722.7 P 0.000044
AFFX-PheX-3_at 825.1 P 0.000052
AFFX-ThrX-5_at 837.3 P 0.000070
AFFX-ThrX-M_at 1510.4 P 0.000044

Total number of rows: 54675

Table truncated, full table size 1475 Kbytes.




Supplementary file Size Download File type/resource
GSM325796.CEL.gz 4.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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