|
Status |
Public on May 03, 2008 |
Title |
22 h post LH surge, biological rep 3 |
Sample type |
RNA |
|
|
Source name |
Granulosa cells collected 22 h post LH surge from buffalo cows
|
Organism |
Bubalus bubalis |
Characteristics |
Granulosa cells collected 22 h post LH surge
|
Biomaterial provider |
Dr. R. Medhamurthy
|
Treatment protocol |
For the purpose of microarray analysis, GnRH (100 µg, i.m.) was administered 36 h post PGF2alpha, Ovaries were collected at 24 h post GnRH, from which granulosa cells were isolated (n=3).
|
Extracted molecule |
total RNA |
Extraction protocol |
Total RNA was isolated using Trizol reagent (Sigma Aldrich Co., St.Louis, MO) according to manufacturer’s instructions.
|
Label |
Biotin
|
Label protocol |
Standard Affymetrix protocols (Chip Expression Analysis Technical Manual rev. 3, 2001)
|
|
|
Hybridization protocol |
Standard Affymetrix protocols (Chip Expression Analysis Technical Manual rev. 3, 2001)
|
Scan protocol |
Standard Affymetrix protocols (Chip Expression Analysis Technical Manual rev. 3, 2001) using scanner 3000 series
|
Description |
Probe level measurements produced by robust multichip average (RMA) algorithm
|
Data processing |
The processed image files (.CEL) were normalized across arrays using the robust multichip average (RMA) algorithm and log-transformed (base 2).
|
|
|
Submission date |
May 01, 2008 |
Last update date |
May 02, 2008 |
Contact name |
jyotsna U rao |
E-mail(s) |
jyothsna@mrdg.iisc.ernet.in
|
Phone |
9180-22932490
|
Fax |
9180-23600999
|
Organization name |
Indian Institute of Science
|
Department |
MRDG
|
Lab |
Dr. R. Medhamurthy
|
Street address |
C.V. Raman Road
|
City |
Bangalore |
State/province |
Karnataka |
ZIP/Postal code |
560012 |
Country |
India |
|
|
Platform ID |
GPL2112 |
Series (1) |
GSE11312 |
Gene expression profiling of the periovulatory follicle |
|