|
Status |
Public on Jun 20, 2008 |
Title |
GBM, radiotherapy (147) |
Sample type |
RNA |
|
|
Source name |
brain (resected material)
|
Organism |
Homo sapiens |
Characteristics |
tissue: brain (resected material) disease status: GBM patient: 147 age: 49.4 gender: MALE treatment: radiotherapy survival status: 1 survival time in months: 15.07 mgmt status: M
|
Extracted molecule |
total RNA |
Extraction protocol |
Qiagen Rneasy Lipid Tissue mini kit protocol
|
Label |
biotin
|
Label protocol |
Affymetrix Small sample target labelling assay (double amplification) with ENZO kit, start with 100ng
|
|
|
Hybridization protocol |
Affymetrix hybridisation protocol
|
Scan protocol |
GeneChip Operating Software instructions using GeneChip Scanner 3000 High-Resolution Scanning Patch
|
Description |
MGMT status: M
|
Data processing |
RMA: background substruction, quantile normalization and median polish summarization.
|
|
|
Submission date |
May 03, 2007 |
Last update date |
Aug 28, 2018 |
Contact name |
Monika E Hegi |
E-mail(s) |
monika.hegi@chuv.ch
|
Organization name |
CHUV
|
Department |
Neurosurgery
|
Lab |
LTBG
|
Street address |
Bugnon 46
|
City |
Lausanne |
State/province |
Vaud |
ZIP/Postal code |
1011 |
Country |
Switzerland |
|
|
Platform ID |
GPL570 |
Series (1) |
GSE7696 |
Glioblastoma from a homogenous cohort of patients treated within clinical trial |
|
Relations |
Reanalyzed by |
GSE119087 |