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GEO accession:
Sample GSM178461
Query DataSets for GSM178461
Status
Public on Mar 30, 2007
Title
Normal (Norm#2 T=0)
Sample type
RNA
Source name
Human kidney bx
Organism
Homo sapiens
Characteristics
Time zero bx - Normal path
Extracted molecule
total RNA
Extraction protocol
Trizol + Qiagen
Label
Biotin
Label protocol
Standard Affymetrix (small sample protocol)
Hybridization protocol
Standard Affymetrix
Scan protocol
Standard Affymetrix
Description
Standard Affymetrix
Data processing
GCOS expression values
Submission date
Mar 28, 2007
Last update date
Aug 15, 2021
Contact name
Walter Park
E-mail(s)
park.walter@mayo.edu
Organization name
Mayo Clinic
Street address
200 1st ST SW
City
Rochester
State/province
MN
ZIP/Postal code
55901
Country
USA
Platform ID
GPL570
Series (1)
GSE7392
Molecular Evidence of Injury and Inflammation in Normal and Fibrotic Renal Allografts One Year Post-Transplant
Relations
Reanalyzed by
GSE64985
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
VALUE
Signal Intensity
ABS_CALL
Present - Absent - Marginal call
DETECTION P-VALUE
Detection p-value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
1555.86
P
0.000856509
AFFX-BioB-M_at
2137.95
P
0.000296708
AFFX-BioB-3_at
1628.36
P
0.00010954
AFFX-BioC-5_at
4757.42
P
5.16732e-05
AFFX-BioC-3_at
5079.89
P
4.42873e-05
AFFX-BioDn-5_at
10660
P
6.02111e-05
AFFX-BioDn-3_at
27415.4
P
7.00668e-05
AFFX-CreX-5_at
53141.4
P
5.16732e-05
AFFX-CreX-3_at
60508.2
P
4.42873e-05
AFFX-DapX-5_at
40581
P
4.42873e-05
AFFX-DapX-M_at
78858.4
P
4.42873e-05
AFFX-DapX-3_at
83344.8
P
4.42873e-05
AFFX-LysX-5_at
18864.3
P
4.42873e-05
AFFX-LysX-M_at
56817.6
P
4.42873e-05
AFFX-LysX-3_at
72769.6
P
4.42873e-05
AFFX-PheX-5_at
5.72398
A
0.957038
AFFX-PheX-M_at
8.06044
A
0.945787
AFFX-PheX-3_at
66.6673
A
0.52976
AFFX-ThrX-5_at
35.7952
A
0.5
AFFX-ThrX-M_at
48.6894
A
0.470241
Total number of rows:
54675
Table truncated, full table size
1610 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM178461.CEL.gz
4.8 Mb
(ftp)
(http)
CEL
GSM178461.CHP.gz
292.7 Kb
(ftp)
(http)
CHP
Processed data provided as supplementary file
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