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Sample GSM15692 Query DataSets for GSM15692
Status Public on Jan 27, 2004
Title CurrentSmoker 54
Sample type RNA
 
Source name Bronchial Epithelia
Organism Homo sapiens
Characteristics tissue: Bronchial Epithelium
Extracted molecule total RNA
Extraction protocol RNA was extracted by using TRIzol Reagent (Invitrogen) according to the manufacturer's protocol
Label protocol Affymetrix Suggested Protocol
 
Hybridization protocol Affymetrix Suggested Protocol
Scan protocol Affymetrix Suggested Protocol
Description Volunteer patients underwent bronchoscopy from which RNA was extracted using a commercial RNA extraction kit. Targets were produced using standard Affymetrix procedures from about 8ug of total RNA.
Keywords = Homo Sapiens, bronchial epithelia, molecular screen for smoking related changes to transcript levels in bronchial epithelia
Data processing MAS5.0 Scaled 100 generated expression value
 
Submission date Jan 24, 2004
Last update date Aug 18, 2014
Contact name Avrum Spira
E-mail(s) aspira@bu.edu
Phone 617-638-4860
Fax 617-536-8093
URL http://www.pulmonomics.com
Organization name Boston University Medical Center
Department Pulmonary and Critical Care Medicine
Lab Pulmonomics Lab
Street address 715 Albany Street, R304
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platform ID GPL96
Series (1)
GSE994 Effects of cigarette smoke on the human airway epithelial cell transcriptome
Relations
Reanalyzed by GSE60486

Data table header descriptions
ID_REF Affymetrix Probeset ID
VALUE MAS5.0 Scaled 100 generated expression value
DETECTION P-VALUE P-Value that indicates the significance level of the detection call

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 1352.200 0.000805
1053_at 7.300 0.765443
117_at 91.300 0.267463
121_at 707.100 0.009985
1255_g_at 1.900 0.438361
1294_at 329.800 0.004180
1316_at 99.500 0.073830
1320_at 18.400 0.660442
1405_i_at 79.300 0.023995
1431_at 67.400 0.060419
1438_at 53.100 0.284747
1487_at 185.300 0.189687
1494_f_at 349.600 0.007543
1598_g_at 337.900 0.054470
160020_at 336.000 0.048995
1729_at 289.600 0.011447
1773_at 9.300 0.837065
177_at 99.100 0.107301
179_at 572.700 0.117160
1861_at 198.100 0.127645

Total number of rows: 22215

Table truncated, full table size 587 Kbytes.




Supplementary file Size Download File type/resource
GSM15692.CEL.gz 2.8 Mb (ftp)(http) CEL

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