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GEO accession:
Sample GSM138033
Query DataSets for GSM138033
Status
Public on Sep 28, 2006
Title
Kidney - 215933
Sample type
RNA
Source name
Kidney
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Quality metric = 28S to 18S: 1.4
Patient Age: 50-60
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 26-30
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: Yes
Clinical T: 1a
Clinical N: 0
Clinical M: 0
Clinical Stage: 1
Clinical Grade: 2
Clinical Multiple Tumors: No
Clinical Stage During or Following Multimodality Therapy: No
Primary Site: Kidney
Histology: Conventional(clear cell) renal carcinoma
Submission date
Sep 28, 2006
Last update date
Aug 28, 2018
Contact name
Erin Curley
E-mail(s)
ecurley@intgen.org
Phone
602-343-8808
Fax
602-343-8440
URL
http://www.intgen.org
Organization name
IGC
Department
Lab
expO
Street address
445 N. 5th Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85004
Country
USA
Platform ID
GPL570
Series (1)
GSE2109
Expression Project for Oncology (expO)
Relations
Reanalyzed by
GSE64985
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
The name of the probe set, blank for control probes
VALUE
The signal value calculated by MAS5, normalized
ABS_CALL
The detection value calculated by the MAS5
DETECTION P-VALUE
The detection p-value calculated by the MAS5
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
5534.3
P
0.000110
AFFX-BioB-M_at
8695.4
P
0.000044
AFFX-BioB-3_at
5977.1
P
0.000044
AFFX-BioC-5_at
14206.2
P
0.000044
AFFX-BioC-3_at
17592.7
P
0.000044
AFFX-BioDn-5_at
43314.8
P
0.000044
AFFX-BioDn-3_at
60064.1
P
0.000044
AFFX-CreX-5_at
164536.5
P
0.000044
AFFX-CreX-3_at
192488.2
P
0.000044
AFFX-DapX-5_at
379.6
P
0.006871
AFFX-DapX-M_at
2801.5
P
0.000662
AFFX-DapX-3_at
10745.5
P
0.000044
AFFX-LysX-5_at
238.0
A
0.156710
AFFX-LysX-M_at
574.6
A
0.072700
AFFX-LysX-3_at
2115.1
P
0.000070
AFFX-PheX-5_at
112.8
A
0.631562
AFFX-PheX-M_at
194.3
A
0.195266
AFFX-PheX-3_at
1412.0
P
0.001593
AFFX-ThrX-5_at
179.8
A
0.382599
AFFX-ThrX-M_at
408.0
P
0.015183
Total number of rows:
54675
Table truncated, full table size
1480 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM138033.CEL.gz
7.4 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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