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Sample GSM138033 Query DataSets for GSM138033
Status Public on Sep 28, 2006
Title Kidney - 215933
Sample type RNA
 
Source name Kidney
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.4
Patient Age: 50-60
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 26-30
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: Yes
Clinical T: 1a
Clinical N: 0
Clinical M: 0
Clinical Stage: 1
Clinical Grade: 2
Clinical Multiple Tumors: No
Clinical Stage During or Following Multimodality Therapy: No
Primary Site: Kidney
Histology: Conventional(clear cell) renal carcinoma
 
Submission date Sep 28, 2006
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 5534.3 P 0.000110
AFFX-BioB-M_at 8695.4 P 0.000044
AFFX-BioB-3_at 5977.1 P 0.000044
AFFX-BioC-5_at 14206.2 P 0.000044
AFFX-BioC-3_at 17592.7 P 0.000044
AFFX-BioDn-5_at 43314.8 P 0.000044
AFFX-BioDn-3_at 60064.1 P 0.000044
AFFX-CreX-5_at 164536.5 P 0.000044
AFFX-CreX-3_at 192488.2 P 0.000044
AFFX-DapX-5_at 379.6 P 0.006871
AFFX-DapX-M_at 2801.5 P 0.000662
AFFX-DapX-3_at 10745.5 P 0.000044
AFFX-LysX-5_at 238.0 A 0.156710
AFFX-LysX-M_at 574.6 A 0.072700
AFFX-LysX-3_at 2115.1 P 0.000070
AFFX-PheX-5_at 112.8 A 0.631562
AFFX-PheX-M_at 194.3 A 0.195266
AFFX-PheX-3_at 1412.0 P 0.001593
AFFX-ThrX-5_at 179.8 A 0.382599
AFFX-ThrX-M_at 408.0 P 0.015183

Total number of rows: 54675

Table truncated, full table size 1480 Kbytes.




Supplementary file Size Download File type/resource
GSM138033.CEL.gz 7.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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