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Sample GSM133933 Query DataSets for GSM133933
Status Public on Jan 08, 2007
Title Weigel_2-25_CHIP-211-A_Rep1_ATH1
Sample type RNA
 
Source name FLC-3
Organism Arabidopsis thaliana
Characteristics Developmental stage: vegetative plant, 10-18 leaves
Tissue: apical region
Genetic variation: fast neutron flc allele in Col-0 background, early flowering
Treatment protocol LD 0 days
Extracted molecule total RNA
Label biotin
 
Description germplasm: flc-3
light regime1: short day
light regime2: long day
growth media type: soil
average daily humidity:
average daily temperature: 23C
Data processing The data were analysed using Affymetrix Microarray Suite 5.0 (MAS5)
 
Submission date Sep 01, 2006
Last update date Aug 28, 2018
Contact name Nottingham Arabidopsis Stock Centre (NASC)
E-mail(s) affy@arabidopsis.info
Phone +44 (0)115 951 3237
Fax +44 (0)115 951 3297
URL http://arabidopsis.info/
Organization name Nottingham Arabidopsis Stock Centre (NASC)
Department School of Biosciences, University of Nottingham
Street address Sutton Bonington Campus
City Loughborough
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platform ID GPL198
Series (1)
GSE5746 FRI FLC combos
Relations
Reanalyzed by GSE119083

Data table header descriptions
ID_REF
VALUE This is the final calculated measurement for each probe set identifier that has been made comparable across all samples and rows
ABS_CALL A qualitative measurement indicating if the probe set is detected
DETECTION P-VALUE A p-value indicating the significance of the Detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-r2-P1-cre-5_at 2.82616674804688E+003 P 2.44141003349796E-004
AFFX-r2-P1-cre-3_at 3.35564965820313E+003 P 2.44141003349796E-004
AFFX-r2-Ec-bioD-5_at 5.17044189453125E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioD-3_at 6.77622802734375E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioC-5_at 1.82090545654297E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioC-3_at 2.14461990356445E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-M_at 1.11286849975586E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-5_at 9.08012008666992E+001 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-3_at 8.90572357177734E+001 P 2.44141003349796E-004
AFFX-r2-Bs-thr-M_s_at 2.29030090332031E+002 P 2.44141003349796E-004
AFFX-r2-Bs-thr-5_s_at 1.11073539733887E+002 P 2.44141003349796E-004
AFFX-r2-Bs-thr-3_s_at 1.77591949462891E+002 P 2.44141003349796E-004
AFFX-r2-Bs-phe-M_at 7.06180801391602E+001 P 7.32421991415322E-004
AFFX-r2-Bs-phe-5_at 5.31696052551270E+001 P 2.44141003349796E-004
AFFX-r2-Bs-phe-3_at 7.81426620483398E+001 P 2.44141003349796E-004
AFFX-r2-Bs-lys-M_at 2.27566413879395E+001 P 2.44141003349796E-004
AFFX-r2-Bs-lys-5_at 4.62845878601074E+001 P 2.44141003349796E-004
AFFX-r2-Bs-lys-3_at 6.44724884033203E+001 P 1.95312988944352E-003
AFFX-r2-Bs-dap-M_at 3.95867431640625E+002 P 2.44141003349796E-004
AFFX-r2-Bs-dap-5_at 2.73236480712891E+002 P 2.44141003349796E-004

Total number of rows: 22810

Table truncated, full table size 1250 Kbytes.




Supplementary file Size Download File type/resource
GSM133933.CEL.gz 2.1 Mb (ftp)(http) CEL

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