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Sample GSM131460 Query DataSets for GSM131460
Status Public on Jan 08, 2007
Title AtGen_6-9412_Heatstress(3h)+3hrecovery-Shoots-6.0h_Rep2
Sample type RNA
 
Source name Col-0
Organism Arabidopsis thaliana
Characteristics Stock Code: N1092
Tissue: Shoots
Treatment protocol At day 16, stress treatment started at 3 hours of light treatment.
Heat stress (38°C, samples taken at 0.25, 0.5, 1.0, 3.0h of hs and +1, +3, +9, +21h recovery at 25°C),Group Nover/von Koskull-Döring
Extracted molecule total RNA
Label biotin
 
Description location: Growth Room
Atmosphere: Normal
Humidity: 50%
Temperature: 24
Lighting: 16 hour days
Medium: Murashige and Skoog
Water: N/A
Data processing The data were analysed using Affymetrix Microarray Suite 5.0 (MAS5)
 
Submission date Aug 25, 2006
Last update date Aug 28, 2018
Contact name Nottingham Arabidopsis Stock Centre (NASC)
E-mail(s) affy@arabidopsis.info
Phone +44 (0)115 951 3237
Fax +44 (0)115 951 3297
URL http://arabidopsis.info/
Organization name Nottingham Arabidopsis Stock Centre (NASC)
Department School of Biosciences, University of Nottingham
Street address Sutton Bonington Campus
City Loughborough
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platform ID GPL198
Series (1)
GSE5628 AtGenExpress: Stress Treatments (Heat stress)
Relations
Reanalyzed by GSE118579
Reanalyzed by GSE119083

Data table header descriptions
ID_REF
VALUE This is the final calculated measurement for each probe set identifier that has been made comparable across all samples and rows
ABS_CALL A qualitative measurement indicating if the probe set is detected
DETECTION P-VALUE A p-value indicating the significance of the Detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-r2-P1-cre-5_at 2.07302856445312E+003 P 2.44141003349796E-004
AFFX-r2-P1-cre-3_at 2.40916650390625E+003 P 2.44141003349796E-004
AFFX-r2-Ec-bioD-5_at 2.69016174316406E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioD-3_at 4.22528778076172E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioC-5_at 1.07712722778320E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioC-3_at 1.32287216186523E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-M_at 6.69813385009766E+001 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-5_at 5.53594169616699E+001 P 7.32421991415322E-004
AFFX-r2-Ec-bioB-3_at 4.65818099975586E+001 P 2.44141003349796E-004
AFFX-r2-Bs-thr-M_s_at 1.99202680587769E+000 A 6.01073980331421E-001
AFFX-r2-Bs-thr-5_s_at 1.03132047653198E+001 A 8.05663987994194E-002
AFFX-r2-Bs-thr-3_s_at 1.28463876247406E+000 A 7.80517995357513E-001
AFFX-r2-Bs-phe-M_at 2.82390713691711E+000 A 5.00000000000000E-001
AFFX-r2-Bs-phe-5_at 5.55651330947876E+000 A 6.01073980331421E-001
AFFX-r2-Bs-phe-3_at 7.39589929580688E+000 A 6.01073980331421E-001
AFFX-r2-Bs-lys-M_at 3.92610859870911E+000 A 4.32372987270355E-001
AFFX-r2-Bs-lys-5_at 6.17171347141266E-001 A 7.25830018520355E-001
AFFX-r2-Bs-lys-3_at 5.31882143020630E+000 A 1.94580003619194E-001
AFFX-r2-Bs-dap-M_at 2.47401475906372E-001 A 9.04784977436066E-001
AFFX-r2-Bs-dap-5_at 4.44361418485641E-001 A 9.69726979732513E-001

Total number of rows: 22810

Table truncated, full table size 1250 Kbytes.




Supplementary file Size Download File type/resource
GSM131460.CEL.gz 2.3 Mb (ftp)(http) CEL

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