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Sample GSM131425 Query DataSets for GSM131425
Status Public on Jan 08, 2007
Title AtGen_6-8324_Woundingstress-Roots-3.0h_Rep1
Sample type RNA
 
Source name Col-0
Organism Arabidopsis thaliana
Characteristics Stock Code: N1092
Tissue: Roots
Treatment protocol At day 16, stress treatment started at 3 hours of light treatment.
Wounding stress (Punctured with pins), Group Harter
Extracted molecule total RNA
Label biotin
 
Description location: Growth Room
Atmosphere: Normal
Humidity: 50%
Temperature: 24
Lighting: 16 hour days
Medium: Murashige and Skoog
Water: N/A
Data processing The data were analysed using Affymetrix Microarray Suite 5.0 (MAS5)
 
Submission date Aug 25, 2006
Last update date Aug 28, 2018
Contact name Nottingham Arabidopsis Stock Centre (NASC)
E-mail(s) affy@arabidopsis.info
Phone +44 (0)115 951 3237
Fax +44 (0)115 951 3297
URL http://arabidopsis.info/
Organization name Nottingham Arabidopsis Stock Centre (NASC)
Department School of Biosciences, University of Nottingham
Street address Sutton Bonington Campus
City Loughborough
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platform ID GPL198
Series (1)
GSE5627 AtGenExpress: Stress Treatments (Wounding stress)
Relations
Reanalyzed by GSE118579
Reanalyzed by GSE119083

Data table header descriptions
ID_REF
VALUE This is the final calculated measurement for each probe set identifier that has been made comparable across all samples and rows
ABS_CALL A qualitative measurement indicating if the probe set is detected
DETECTION P-VALUE A p-value indicating the significance of the Detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-r2-P1-cre-5_at 2.34527392578125E+003 P 2.44141003349796E-004
AFFX-r2-P1-cre-3_at 2.83182495117188E+003 P 2.44141003349796E-004
AFFX-r2-Ec-bioD-5_at 3.81469665527344E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioD-3_at 4.93368957519531E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioC-5_at 1.21484756469727E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioC-3_at 1.41951873779297E+002 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-M_at 9.62595748901367E+001 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-5_at 5.17420654296875E+001 P 2.44141003349796E-004
AFFX-r2-Ec-bioB-3_at 7.32986068725586E+001 P 7.32421991415322E-004
AFFX-r2-Bs-thr-M_s_at 2.78835153579712E+000 A 8.50341975688934E-001
AFFX-r2-Bs-thr-5_s_at 1.68966209888458E+000 A 4.32372987270355E-001
AFFX-r2-Bs-thr-3_s_at 2.45393252372742E+000 A 6.96289002895355E-001
AFFX-r2-Bs-phe-M_at 1.48044157028198E+000 A 6.01073980331421E-001
AFFX-r2-Bs-phe-5_at 1.66176989674568E-001 A 9.19434010982513E-001
AFFX-r2-Bs-phe-3_at 1.07223045825958E+000 A 6.33789002895355E-001
AFFX-r2-Bs-lys-M_at 1.37471139431000E+000 A 5.00000000000000E-001
AFFX-r2-Bs-lys-5_at 3.79908561706543E+000 A 3.98925989866257E-001
AFFX-r2-Bs-lys-3_at 4.57865095138550E+000 P 3.02734002470970E-002
AFFX-r2-Bs-dap-M_at 3.33429187536240E-001 A 8.70360970497131E-001
AFFX-r2-Bs-dap-5_at 2.54353475570679E+000 A 6.96289002895355E-001

Total number of rows: 22810

Table truncated, full table size 1250 Kbytes.




Supplementary file Size Download File type/resource
GSM131425.CEL.gz 2.2 Mb (ftp)(http) CEL

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