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Sample GSM106662 Query DataSets for GSM106662
Status Public on Apr 27, 2006
Title mLSAGE_Brain_normal_TS25_MMD_SM111
Sample type SAGE
Anchor NlaIII
Tag Count 102823
Tag Length 17
 
Source name Brain, normal
Organism Mus musculus
Characteristics Mouse strain: C57BL/6J
Gender: Male
Age: E17.5
Preparation: Manual microscope dissected
Biomaterial provider Elizabeth Simpson
Extracted molecule total RNA
 
Description Developmental stage = Theiler Stage 25
This library is of the Mouse Atlas of Gene Expression Project: http://www.mouseatlas.org
Also available at CGAP: http://cgap.nci.nih.gov/
Data processing not normalized
 
Submission date Apr 25, 2006
Last update date Nov 19, 2008
Contact name BCGSC BC Cancer Agency
E-mail(s) support@mouseatlas.org
Organization name Canada's Michael Smith Genome Sciences Centre
Department Gene Expression
Lab Marco Marra
Street address 675 West 10th Avenue
City Vancouver
State/province BC
ZIP/Postal code V5Z 1L3
Country Canada
 
Platform ID GPL1349
Series (1)
GSE4726 Mouse Atlas of Gene Expression Project

Data table header descriptions
TAG
COUNT Absolute tag count
TPM tags per million

Data table
TAG COUNT TPM
AAAAAAAAAAAAAAAAA 217 2110.42
AAAAAAAAAAAAAAAAC 6 58.35
AAAAAAAAAAAAAAAAG 10 97.25
AAAAAAAAAAAAAAAAT 3 29.18
AAAAAAAAAAAAAAAGA 1 9.73
AAAAAAAAAAAAAAAGC 1 9.73
AAAAAAAAAAAAAAGAA 4 38.90
AAAAAAAAAAAAAGAAA 1 9.73
AAAAAAAAAAAACAAAC 1 9.73
AAAAAAAAAAAACTTTT 1 9.73
AAAAAAAAAAAATCCCA 1 9.73
AAAAAAAAAACAGCAAA 9 87.53
AAAAAAAAAAGAAAAAA 1 9.73
AAAAAAAAAATGGGTCC 1 9.73
AAAAAAAAACTTTGCAA 1 9.73
AAAAAAAAAGAAAAAAA 1 9.73
AAAAAAAAGGAAAAAAT 1 9.73
AAAAAAAAGGAGTCATA 1 9.73
AAAAAAAATAGTCAATA 1 9.73
AAAAAAAATTAGAAGAC 1 9.73

Total number of rows: 37267

Table truncated, full table size 920 Kbytes.




Supplementary data files not provided
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