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| Status |
Public on Jan 10, 2017 |
| Title |
The microbial taxonomic and functional compositions in three broadleaved forests in temperate and subtropical zones |
| Platform organisms |
Bacteria; Archaea; Eukaryota |
| Sample organism |
soil metagenome |
| Experiment type |
Other
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| Summary |
Global warming has shifted climate zones poleward or upward. However, understanding the responses and mechanism of microbial community structure and functions relevant to natural climate zone succession is challenged by the high complexity of microbial communities. Here, we examined soil microbial community in three broadleaved forests located in the Wulu Mountain (WLM, temperate climate), Funiu Mountain (FNM, at the border of temperate and subtropical climate zones), or Shennongjia Mountain (SNJ, subtropical climate).Soils were characterized for geochemistry, Illumina sequencing was used to determine microbial taxonomic communities and GeoChips 5.0 were used to determine microbial functional genes.
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| Overall design |
Thirty samples were collected from three mountains in temperate and subtropical zones, with 10 replicates in every site
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| Contributor(s) |
Yang S, Zhang Y, Yang Y |
| Citation(s) |
28239373 |
| Submission date |
Dec 11, 2016 |
| Last update date |
Jul 12, 2019 |
| Contact name |
yang sihang |
| E-mail(s) |
yangsihanglear@163.com
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| Organization name |
Tsinghua University
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| Street address |
Haidian district Shuangqing road #30
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| City |
Beijing |
| ZIP/Postal code |
100084 |
| Country |
China |
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| Platforms (1) |
| GPL20235 |
GeoChip 5.0 [Central South University] |
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| Samples (30)
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| Relations |
| BioProject |
PRJNA356971 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE92233_raw_data.txt.gz |
5.0 Mb |
(ftp)(http) |
TXT |
| Processed data included within Sample table |
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