NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE65622 Query DataSets for GSE65622
Status Public on Apr 21, 2016
Title Locally Advanced Rectal Cancer - Radiation Response Prediction Study - Serum Proteins
Organism Homo sapiens
Experiment type Protein profiling by protein array
Summary The study objective was to find new biomarkers of treatment response and adverse events in patients receiving neoadjuvant therapy for locally advanced rectal cancer. Patients received neoadjuvant chemotherapy (NACT) followed by chemoradiotherapy (CRT) and underwent treatment evaluation four weeks after CRT completion. Radical pelvic surgery was planned 2-4 weeks later. Patients were scored for treatment adverse events, according to Common Terminology Criteria for Adverse Events (CTCAE) version 3.0, throughout the neoadjuvant treatment course, including at NACT and CRT completion. Treatment response was assessed by histologic ypTN staging and tumor regression grade (TRG) scoring, as well as progression-free survival (time from Inclusion date to Date of local relapse or Date of metastatic disease, whichever came first) recorded for five years after surgery.
 
Overall design From 80 study patients, serial serum samples were collected at baseline (Sampling point=1), following NACT (post-NACT; Sampling point=2), at CRT completion (post-CRT; Sampling point=4), and at treatment evaluation (Sampling point=5). The samples were analyzed with a high-density antiboly array (AHH-BLG-1; RayBiotech Inc.) for the presence of 507 proteins.
 
Contributor(s) Ree AH
Citation(s) 27145458, 27461255
Submission date Feb 04, 2015
Last update date Jun 27, 2019
Contact name Anne Hansen Ree
E-mail(s) a.h.ree@medisin.uio.no
Organization name Akershus University Hospital
Department Division of Medicine - Oncology
Street address Sykehusveien 25
City Lørenskog
ZIP/Postal code 1478
Country Norway
 
Platforms (1)
GPL19737 RayBio L-Series Human Antibody Array 507
Samples (288)
GSM1601822 Patient001-time1
GSM1601823 Patient001-time2
GSM1601824 Patient001-time4
Relations
BioProject PRJNA274494

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE65622_144_gpr_files.tar.gz 12.1 Mb (ftp)(http) TAR
GSE65622_preprocess_geo.r.gz 2.6 Kb (ftp)(http) R
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap