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Series GSE57459 Query DataSets for GSE57459
Status Public on May 09, 2014
Title Identification of targets regulated by SELP in HSC
Organism Mus musculus
Experiment type Expression profiling by array
Summary To understand the underlying mechanism by which Alox15 gene is required by HSCs, we performed a comparative DNA microarray analysis using total RNA isolated from wild type Lin-Sca-1+c-Kit+, SELP-/- Lin-Sca-1+c-Kit+. The result was validated by quantitative real-time PCR analysis of wild type Lin-Sca-1+c-Kit+ and SELP-/- Lin-Sca-1+c-Kit+.
Cancer stem cells are responsible for the initiation and maintenance of some types of cancer, and few effective target genes in these stem cells have been identified. Here we show that the selp is essential for the survival of leukemia stem cells (LSCs) in BCR-ABL-induced chronic myeloid leukemia (CML). To understand the underlying mechanism through which SELP regulates the function of HSCs, the gene expression profiles between WT and Selp-/- HSCs were compared.
 
Overall design To understand the underlying mechanism through which SELP regulates the function of HSCs, the gene expression profiles between WT and Selp-/- HSCs were compared.
 
Contributor(s) Chen Y, Shan Y, Li S
Citation(s) 25105362
Submission date May 08, 2014
Last update date Mar 04, 2019
Contact name yaoyu chen
E-mail(s) chenyaoyumaine@gmail.com
Phone 7742220688
Organization name NIBR
Department ONC
Street address 250 Mass ave
City cambridge
State/province Massachusetts
ZIP/Postal code 02139
Country USA
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (6)
GSM1383099 1-B6-HSC 1
GSM1383100 1-B6-HSC 2
GSM1383101 1-B6-HSC 3
Relations
BioProject PRJNA246487

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE57459_RAW.tar 27.9 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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