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Series GSE53855 Query DataSets for GSE53855
Status Public on Jan 08, 2014
Title CDK2-dependent activation of PARP-1 is required for hormonal gene regulation in breast cancer cells.
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Eukaryotic gene regulation implies that transcription factors gain access to genomic information via poorly understood processes involving activation and targeting of kinases, histone-modifying enzymes, and chromatin remodelers to chromatin. Here we report that progestin gene regulation in breast cancer cells requires a rapid and transient increase in poly-(ADP)-ribose (PAR), accompanied by a dramatic decrease of cellular NAD that could have broad implications in cell physiology. This rapid increase in nuclear PARylation is mediated by activation of PAR polymerase PARP-1 as a result of phosphorylation by cyclin-dependent kinase CDK2. Hormone-dependent phosphorylation of PARP-1 by CDK2, within the catalytic domain, enhances its enzymatic capabilities. Activated PARP-1 contributes to the displacement of histone H1 and is essential for regulation of the majority of hormone-responsive genes and for the effect of progestins on cell cycle progression. Both global chromatin immunoprecipitation (ChIP) coupled with deep sequencing (ChIP-seq) and gene expression analysis show a strong overlap between PARP-1 and CDK2. Thus, progestin gene regulation involves a novel signaling pathway that connects CDK2-dependent activation of PARP-1 with histone H1 displacement. Given the multiplicity of PARP targets, this new pathway could be used for the pharmacological management of breast cancer.
 
Overall design PARP-1 activation mechanism by CDK2 in response of progestin in breast cancer cells
 
Contributor(s) Wright RG, Castellano G, Bonet J, Le Dilly F, Font-Mateu J, Ballaré C, Nacht AS, Soronellas D, Oliva B, Beato M
Citation(s) 27257257
Submission date Jan 07, 2014
Last update date May 15, 2019
Contact name Miguel Beato
E-mail(s) miguel.beato@crg.eu
Organization name CRG
Street address Aiguader 88
City Barcelona
ZIP/Postal code 08003
Country Spain
 
Platforms (1)
GPL9052 Illumina Genome Analyzer (Homo sapiens)
Samples (6)
GSM1302191 CDK2.T0_ChIPseq
GSM1302192 CDK2.T5_ChIPseq
GSM1302193 CDK2.T30_ChIPseq
Relations
BioProject PRJNA233576
SRA SRP035158

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Supplementary file Size Download File type/resource
GSE53855_readCounts_all_samples.txt.gz 4.0 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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