|
| Status |
Public on Jun 09, 2015 |
| Title |
Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Methylation profiling by array
Genome variation profiling by SNP array
Methylation profiling by genome tiling array
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
26051943 |
| Submission date |
Jun 07, 2012 |
| Last update date |
May 15, 2019 |
| Contact name |
Kornelia Polyak |
| E-mail(s) |
kornelia_polyak@dfci.harvard.edu
|
| Phone |
617-632-2106
|
| Organization name |
Dana-Farber Cancer Institute
|
| Department |
Medical Oncology
|
| Lab |
Polyak
|
| Street address |
450 Brookline Ave
|
| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02215 |
| Country |
USA |
| |
|
| Platforms (7)
|
| GPL6801 |
[GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array |
| GPL8490 |
Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2) |
| GPL9052 |
Illumina Genome Analyzer (Homo sapiens) |
| GPL13393 |
AB SOLiD 4 System (Homo sapiens) |
| GPL13534 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) |
| GPL14761 |
Helicos HeliScope (Homo sapiens) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
|
| Samples (106)
|
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE38788 |
Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer [ChIP-Seq 1] |
| GSE38789 |
Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer [ChIP-Seq 2] |
| GSE38790 |
Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer [DGE] |
| GSE38791 |
Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer [methylation27] |
| GSE39412 |
Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer [SNP] |
| GSE67619 |
Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer [methylation450] |
| GSE69112 |
Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer [ChIP-Seq 3] |
| GSE69114 |
Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer [RNA-Seq] |
|
| Relations |
| BioProject |
PRJNA170828 |
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