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GEO accession:
Series GSE33704
Query DataSets for GSE33704
Status
Public on Jan 20, 2012
Title
Forkhead transcription factors establish origin timing and long-range clustering in S. cerevisiae
Organism
Saccharomyces cerevisiae
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Genome binding/occupancy profiling by genome tiling array
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
22265405
Submission date
Nov 15, 2011
Last update date
May 15, 2019
Contact name
Simon Robert Vincent Knott
E-mail(s)
sknott@cshl.edu
Organization name
Cold Spring Harbor Laboratory
Lab
Hannon
Street address
1 Bungtown Rd
City
Cold Spring Harbor
State/province
NY
ZIP/Postal code
11724
Country
USA
Platforms (2)
GPL9377
Illumina Genome Analyzer II (Saccharomyces cerevisiae)
GPL14887
NimbleGen S.cerevisiae CGH HX12 Array [090615_Scer_OA_CGH]
Samples (56)
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GSM832674
BrdU-IP-seq WT 1
GSM832675
BrdU-IP-seq WT 2
GSM832676
BrdU-IP-seq fkh1Δ 1
GSM832677
BrdU-IP-seq fkh1Δ 2
GSM832678
BrdU-IP-seq fkh2Δ 1
GSM832679
BrdU-IP-seq fkh2Δ 2
GSM832680
BrdU-IP-seq fkh1Δfkh1Δ 1
GSM832681
BrdU-IP-seq fkh1Δfkh1Δ 2
GSM832682
BrdU-IP-seq fkh1Δfkh1Δ2C 1
GSM832683
BrdU-IP-seq fkh1Δfkh1Δ2C 2
GSM832684
RNA-seq Asynchronous WT 1
GSM832685
RNA-seq Asynchronous WT 2
GSM832686
RNA-seq Asynchronous fkh1Δfkh1Δ2C 1
GSM832687
RNA-seq Asynchronous fkh1Δfkh1Δ2C 2
GSM832688
RNA-seq G1 Arrested WT 1
GSM832689
RNA-seq G1 Arrested WT 2
GSM832690
RNA-seq G1 Arrested fkh1Δfkh1Δ2C 1
GSM832691
RNA-seq G1 Arrested fkh1Δfkh1Δ2C 2
GSM832692
Rpb3-chIP-seq Asynchronous WT 1
GSM832693
Rpb3-chIP-seq Asynchronous WT 2
GSM832694
Rpb3-chIP-seq Asynchronous fkh1Δfkh1Δ2C 1
GSM832695
Rpb3-chIP-seq Asynchronous fkh1Δfkh1Δ2C 2
GSM832696
Rpb3-chIP-seq G1 Arrested WT 1
GSM832697
Rpb3-chIP-seq G1 Arrested WT 2
GSM832698
Rpb3-chIP-seq G1 Arrested fkh1Δfkh1Δ2C 1
GSM832699
Rpb3-chIP-seq G1 Arrested fkh1Δfkh1Δ2C 2
GSM833116
BrdU_Pulse_WT_Timepont_1
GSM833117
BrdU_Pulse_WT_Timepont_2
GSM833118
BrdU_Pulse_WT_Timepont_3
GSM833119
BrdU_Pulse_WT_Timepont_4
GSM833120
BrdU_Pulse_WT_Timepont_5
GSM833121
BrdU_Pulse_WT_Timepont_6
GSM833122
BrdU_Pulse_WT_Timepont_7
GSM833123
BrdU_Pulse_fkh1Δfkh2Δ2C_Timepont_1
GSM833124
BrdU_Pulse_fkh1Δfkh2Δ2C_Timepont_2
GSM833125
BrdU_Pulse_fkh1Δfkh2Δ2C_Timepont_3
GSM833126
BrdU_Pulse_fkh1Δfkh2Δ2C_Timepont_4
GSM833127
BrdU_Pulse_fkh1Δfkh2Δ2C_Timepont_5
GSM833128
BrdU_Pulse_fkh1Δfkh2Δ2C_Timepont_6
GSM833129
BrdU_Pulse_fkh1Δfkh2Δ2C_Timepont_7
GSM833130
BrdU_HU_IP_WT_For_ARS305_Analysis
GSM833131
BrdU_HU_IP_ARS305Δ_For_ARS305_Analysis
GSM833132
Fkh1_IP_WT_For_ARS305_Analysis
GSM833133
Fkh1_IP_ARS305Δ_For_ARS305_Analysis
GSM833134
ORC_IP_WT_For_ARS305_Analysis
GSM833135
ORC_IP_ARS305Δ_For_ARS305_Analysis
GSM833136
ORC_IP_WT
GSM833137
ORC_IP_fkh1Δfkh2Δ2C
GSM833138
MCM_IP_WT
GSM833139
MCM_IP_fkh1Δfkh2Δ2C
GSM833140
Cdc45_IP_WT
GSM833141
Cdc45_IP_fkh1Δfkh2Δ2C
GSM833142
WT ARS305-Bait 4C 1
GSM833143
WT ARS305-Bait 4C 2
GSM833144
fkh1Δfkh2Δ2C ARS305-Bait 4C 1
GSM833145
fkh1Δfkh2Δ2C ARS305-Bait 4C 2
This SuperSeries is composed of the following SubSeries:
GSE33677
Forkhead transcription factors establish origin timing and long-range clustering in S. cerevisiae [Sequence Data]
GSE33702
Forkhead transcription factors establish origin timing and long-range clustering in S. cerevisiae [Array Data]
Relations
BioProject
PRJNA148483
Download family
Format
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TXT
Supplementary file
Size
Download
File type/resource
GSE33704_RAW.tar
132.4 Mb
(http)
(custom)
TAR (of PAIR)
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