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Series GSE28244 Query DataSets for GSE28244
Status Public on Oct 01, 2011
Title Expression profile of maize´s stalk challenged with the corn borer Sesamia nonagrioides
Organism Zea mays
Experiment type Expression profiling by array
Summary Stalk borers are major pests for some of the most important crops in the world, such as maize or rice. Plant defense mechanisms against these herbivores have been poorly investigated. The maize´s stalk responds to insect feeding activating defense genes including hormone biosynthetic-related or proteinase inhibitor transcripts. The most outstanding conclusion is that cells in the maize´s stalk undergo cell wall fortification after corn borer tunneling.
We performed a gene expression profiling to identify those genes differentially expressed in maize after infestation with the corn borer S. nonagrioides.
 
Overall design Four genetically unrelated maize inbred lines (EP39, EP42, CM151 and PB130) were infested at VT (tasseling) developmental stage with a mass of approximately 40 eggs of S. nonagrioides laid on the sheath of the main ear. Another four biological replicates per genotype were used as control. Samples for RNA extraction were harvested fifteen days after infestation.
 
Contributor(s) Rodriguez VM, Santiago R, Malvar RA, Butron A
Citation(s) 21916555
Submission date Mar 29, 2011
Last update date Mar 23, 2012
Contact name Victor M Rodriguez
E-mail(s) vmrodriguez@mbg.csic.es
Organization name Mision Biologica de Galicia (CSIC)
Department Plant Genetics and Breeding
Street address Apartado 28
City Pontevedra
ZIP/Postal code E-36080
Country Spain
 
Platforms (1)
GPL4032 [Maize] Affymetrix Maize Genome Array
Samples (8)
GSM699152 Control plant, biological rep1
GSM699153 Infested plant, biological rep1
GSM699154 Control plant, biological rep2
Relations
BioProject PRJNA139593

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE28244_RAW.tar 15.2 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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