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Series GSE123816 Query DataSets for GSE123816
Status Public on Apr 09, 2021
Title Organoid phenotypic testing identifies IFN-beta as neuroprotective compound against ZIKA virus (ZIKV)
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Administration of recombinant interferons to 3D brain organoid cultures infected with ZIKV identifies IFN-beta as compound that alleviates organoid damage and inhibits ZIKV
 
Overall design Comparison of transcriptomes from ZIKV infected or MOCK organoids treated with IFN-alpha or IFN-beta or left untreated (6 conditions) at two time points
 
Contributor(s) Krenn V, Burkard TR, Knoblich JA
Citation(s) 33838105
Submission date Dec 13, 2018
Last update date Jul 09, 2021
Contact name Thomas Rainer Burkard
E-mail(s) thomas.burkard@imba.oeaw.ac.at
Organization name IMBA
Street address Dr. Bohrgasse 7
City Vienna
ZIP/Postal code 1030
Country Austria
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (36)
GSM3511798 MOCK_4dpi-1 (techn. Rep. 1 & 2)
GSM3511799 MOCK_4dpi-2 (techn. Rep. 1 & 2)
GSM3511800 MOCK_4dpi-3 (techn. Rep. 1 & 2)
Relations
BioProject PRJNA509917
SRA SRP173392

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE123816_RAW.tar 2.8 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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