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Platform GPL16694 Query DataSets for GPL16694
Status Public on Feb 19, 2013
Title Agilent-022522 SurePrint G3 CGH array 4X180K (Probe Name version)
Technology type in situ oligonucleotide
Distribution commercial
Organism Homo sapiens
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
Description 170k BaBo UMCG plus Cancer Census.
Arrays of this design have barcodes that begin with 16022522 or 2522522.
design AMADID#022522
 
Submission date Feb 19, 2013
Last update date Apr 30, 2014
Organization Agilent Technologies
E-mail(s) cag_sales-na@agilent.com
Phone 877-424-4536
URL http://www.agilent.com
Department
Street address
City Palo Alto
State/province CA
ZIP/Postal code 94304
Country USA
 
Samples (330) GSM1088667, GSM1088668, GSM1088669, GSM1088670, GSM1088671, GSM1088672 
Series (9)
GSE44587 Crizotinib inhibits metabolic inactivation of gemcitabine in ortothopic pancreatic tumors derived from primary cells with c-Met overexpression
GSE53234 Human lung adenocarcinoma NCI-H1975 cells: parental vs cell lines resistant to the EGFR-TK inhibitor CNX-2006
GSE56425 Novel type of EATL evolving from mucosal γδ-T-cells in a RCD type I patient

Data table header descriptions
ID Spot identifier
CONTROL_TYPE Control type
GB_ACC GenBankAccession
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
GB_RANGE hg18 build
CYTOBAND Cytoband
DESCRIPTION Description
SPOT_ID spot identifier

Data table
ID CONTROL_TYPE GB_ACC GENE_SYMBOL GENE_NAME ACCESSION_STRING CHROMOSOMAL_LOCATION GB_RANGE CYTOBAND DESCRIPTION SPOT_ID
(-)3xSLv1 neg CONTROL: (-)3xSLv1
A_14_P100000 FALSE NM_019027 RBM47 RNA binding motif protein 47 ref|NM_019027|ref|NM_001098634 chr4:40208083-40208142 NC_000004.10[40208083..40208142] hs|p14 Homo sapiens RNA binding motif protein 47 (RBM47), transcript variant 2, mRNA.
A_14_P100001 FALSE NM_032888 COL27A1 collagen, type XXVII, alpha 1 ref|NM_032888 chr9:116020366-116020413 NC_000009.10[116020366..116020413] hs|q32 Homo sapiens collagen, type XXVII, alpha 1 (COL27A1), mRNA.
A_14_P100003 FALSE NM_153262 SYT14 synaptotagmin XIV ref|NM_153262 chr1:208179562-208179621 NC_000001.9[208179562..208179621] hs|q32.2 Homo sapiens synaptotagmin XIV (SYT14), mRNA.
A_14_P100004 FALSE NM_006737 KIR3DL2 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2 ref|NM_006737 chr19:60069707-60069757 NC_000019.8[60069707..60069757] hs|q13.42 Homo sapiens killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2 (KIR3DL2), mRNA.
A_14_P100005 FALSE AK055805 gb|AK055805|gb|AF218085 chr21:14876312-14876366 NC_000021.7[14876312..14876366] hs|q11.2 Homo sapiens cDNA FLJ31243 fis, clone KIDNE2005038.
A_14_P100006 FALSE chr7:54725577-54725636 NC_000007.12[54725577..54725636] hs|p11.2
A_14_P100007 FALSE NM_001008572 TTLL1 tubulin tyrosine ligase-like family, member 1 ref|NM_001008572|ref|NM_012263 chr22:41767340-41767399 NC_000022.9[41767340..41767399] hs|q13.2 Homo sapiens tubulin tyrosine ligase-like family, member 1 (TTLL1), transcript variant 2, mRNA.
A_14_P100008 FALSE NM_002375 MAP4 microtubule-associated protein 4 ref|NM_002375|ref|NM_030885 chr3:48069785-48069844 NC_000003.10[48069785..48069844] hs|p21.31 Homo sapiens microtubule-associated protein 4 (MAP4), transcript variant 1, mRNA.
A_14_P100009 FALSE NM_020344 SLC24A2 solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 ref|NM_020344 chr9:19636699-19636758 NC_000009.10[19636699..19636758] hs|p22.1 Homo sapiens solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 (SLC24A2), mRNA.
A_14_P100010 FALSE NM_178443 FERMT3 fermitin family homolog 3 (Drosophila) ref|NM_178443|ref|NM_031471 chr11:63746801-63746857 NC_000011.8[63746801..63746857] hs|q13.1 Homo sapiens fermitin family homolog 3 (Drosophila) (FERMT3), transcript variant URP2LF, mRNA.
A_14_P100011 FALSE chr1:38603709-38603768 NC_000001.9[38603709..38603768] hs|p34.3
A_14_P100012 FALSE NM_015576 ERC2 ELKS/RAB6-interacting/CAST family member 2 ref|NM_015576 chr3:56211013-56211072 NC_000003.10[56211013..56211072] hs|p14.3 Homo sapiens ELKS/RAB6-interacting/CAST family member 2 (ERC2), mRNA.
A_14_P100013 FALSE chr3:49117495-49117551 NC_000003.10[49117495..49117551] hs|p21.31
A_14_P100014 FALSE NM_001098515 MRGPRF MAS-related GPR, member F ref|NM_001098515|ref|NM_145015 chr11:68528459-68528518 NC_000011.8[68528459..68528518] hs|q13.2 Homo sapiens MAS-related GPR, member F (MRGPRF), transcript variant 1, mRNA.
A_14_P100015 FALSE NM_014012 REM1 RAS (RAD and GEM)-like GTP-binding 1 ref|NM_014012 chr20:29536104-29536161 NC_000020.9[29536104..29536161] hs|q11.21 Homo sapiens RAS (RAD and GEM)-like GTP-binding 1 (REM1), mRNA.
A_14_P100016 FALSE NM_006096 NDRG1 N-myc downstream regulated gene 1 ref|NM_006096 chr8:134367165-134367224 NC_000008.9[134367165..134367224] hs|q24.22 Homo sapiens N-myc downstream regulated gene 1 (NDRG1), mRNA.
A_14_P100017 FALSE NM_000305 PON2 paraoxonase 2 ref|NM_000305|ref|NM_001018161 chr7:94901763-94901822 NC_000007.12[94901763..94901822] hs|q21.3 Homo sapiens paraoxonase 2 (PON2), transcript variant 1, mRNA.
A_14_P100018 FALSE NM_003908 EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa ref|NM_003908 chr20:32159244-32159303 NC_000020.9[32159244..32159303] hs|q11.22 Homo sapiens eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa (EIF2S2), mRNA.
A_14_P100019 FALSE chr13:85638560-85638619 NC_000013.9[85638560..85638619] hs|q31.1

Total number of rows: 177071

Table truncated, full table size 28531 Kbytes.




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