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Status
Public on Jan 12, 2013
Title
Utz lab influenza peptide array
Technology type
spotted peptide or protein
Distribution
non-commercial
Organisms
Influenza B virus ; H1N1 subtype ; H3N2 subtype Manufacturer
Laboratory of Paul J. Utz
Manufacture protocol
We printed streptavidin-surface glass slides (Arrayit, Sunnyvale, CA) with biotinylated 19-mer peptides (Sigma Aldrich, St. Louis, MO) diluted to a concentration of 0.5 mg ml-1 in peptide printing buffer [PBS plus 2.5% glycerol (Sigma)] in replicates of three using a VersArray ChipWriter Compact robotic microarrayer and ChipWriter Pro software (BioRad).
Description
Influenza - Orthomyxovidiae, H1N1 (A/Brisbane/59/2007), H3N2 (A/Brisbane/10/2007), and B (B/Brisbane/60/2008)
Submission date
Jan 11, 2013
Last update date
May 01, 2013
Contact name
Jordan Price
Organization name
Oberlin College
Street address
119 Woodland St
City
Oberlin
State/province
OH
ZIP/Postal code
44089
Country
USA
Samples (152)
GSM1132165 , GSM1132166 , GSM1132167 , GSM1132168 , GSM1132169 , GSM1132170
GSM1132171 ,
GSM1132172 ,
GSM1132173 ,
GSM1132174 ,
GSM1132175 ,
GSM1132176 ,
GSM1132177 ,
GSM1132178 ,
GSM1132179 ,
GSM1132180 ,
GSM1132181 ,
GSM1132182 ,
GSM1132183 ,
GSM1132184 ,
GSM1132185 ,
GSM1132186 ,
GSM1132187 ,
GSM1132188 ,
GSM1132189 ,
GSM1132190 ,
GSM1132191 ,
GSM1132192 ,
GSM1132193 ,
GSM1132194 ,
GSM1132195 ,
GSM1132196 ,
GSM1132197 ,
GSM1132198 ,
GSM1132199 ,
GSM1132200 ,
GSM1132201 ,
GSM1132202 ,
GSM1132203 ,
GSM1132204 ,
GSM1132205 ,
GSM1132206 ,
GSM1132207 ,
GSM1132208 ,
GSM1132209 ,
GSM1132210 ,
GSM1132211 ,
GSM1132212 ,
GSM1132213 ,
GSM1132214 ,
GSM1132215 ,
GSM1132216 ,
GSM1132217 ,
GSM1132218 ,
GSM1132219 ,
GSM1132220 ,
GSM1132221 ,
GSM1132222 ,
GSM1132223 ,
GSM1132224 ,
GSM1132225 ,
GSM1132226 ,
GSM1132227 ,
GSM1132228 ,
GSM1132229 ,
GSM1132230 ,
GSM1132231 ,
GSM1132232 ,
GSM1132233 ,
GSM1132234 ,
GSM1132235 ,
GSM1132236 ,
GSM1132237 ,
GSM1132238 ,
GSM1132239 ,
GSM1132240 ,
GSM1132241 ,
GSM1132242 ,
GSM1132243 ,
GSM1132244 ,
GSM1132245 ,
GSM1132246 ,
GSM1132247 ,
GSM1132248 ,
GSM1132249 ,
GSM1132250 ,
GSM1132251 ,
GSM1132252 ,
GSM1132253 ,
GSM1132254 ,
GSM1132255 ,
GSM1132256 ,
GSM1132257 ,
GSM1132258 ,
GSM1132259 ,
GSM1132260 ,
GSM1132261 ,
GSM1132262 ,
GSM1132263 ,
GSM1132264 ,
GSM1132265 ,
GSM1132266 ,
GSM1132267 ,
GSM1132268 ,
GSM1132269 ,
GSM1132270 ,
GSM1132271 ,
GSM1132272 ,
GSM1132273 ,
GSM1132274 ,
GSM1132275 ,
GSM1132276 ,
GSM1132277 ,
GSM1132278 ,
GSM1132279 ,
GSM1132280 ,
GSM1132281 ,
GSM1132282 ,
GSM1132283 ,
GSM1132284 ,
GSM1132285 ,
GSM1132286 ,
GSM1132287 ,
GSM1132288 ,
GSM1132289 ,
GSM1132290 ,
GSM1132291 ,
GSM1132292 ,
GSM1132293 ,
GSM1132294 ,
GSM1132295 ,
GSM1132296 ,
GSM1132297 ,
GSM1132298 ,
GSM1132299 ,
GSM1132300 ,
GSM1132301 ,
GSM1132302 ,
GSM1132303 ,
GSM1132304 ,
GSM1132305 ,
GSM1132306 ,
GSM1132307 ,
GSM1132308 ,
GSM1132309 ,
GSM1132310 ,
GSM1132311 ,
GSM1132312 ,
GSM1132313 ,
GSM1132314 ,
GSM1132315 ,
GSM1132316 Series (1)
GSE43446 Influenza peptide reactivity within a cohort of age-stratified individuals pre and post vaccination with the 2008/2009 trivalent influenza vaccine
Data table header descriptions ID antigen number
Peptide Source commercial source of antigen
Source Species species antigen derived from (whole protein or peptide sequence)
Amino Acid Sequence Peptide sequence NH2 --> C00H
SPOT_ID spot if
Data table ID Peptide Source Source Species Amino Acid Sequence SPOT_ID 1
Seas09H3_1
Sigma
"Influenza - Orthomyxovidiae, H3N2 (A/Brisbane/10/2007)"
SSTGEICDSPHQILDGENC
Seas09H3_1
2
Seas09H3_2
Sigma
"Influenza - Orthomyxovidiae, H3N2 (A/Brisbane/10/2007)"
SPHQILDGENCTLIDALLG
Seas09H3_2
3
Seas09H3_3
Sigma
"Influenza - Orthomyxovidiae, H3N2 (A/Brisbane/10/2007)"
CTLIDALLGDPQCDGFQNK
Seas09H3_3
4
Seas09H3_4
Sigma
"Influenza - Orthomyxovidiae, H3N2 (A/Brisbane/10/2007)"
PQCDGFQNKKWDLFVERSK
Seas09H3_4
5
Seas09H3_5
Sigma
"Influenza - Orthomyxovidiae, H3N2 (A/Brisbane/10/2007)"
WDLFVERSKAYSNCYPYDV
Seas09H3_5
6
Seas09H3_6
Sigma
"Influenza - Orthomyxovidiae, H3N2 (A/Brisbane/10/2007)"
YSNCYPYDVPDYASLRSLV
Seas09H3_6
7
Seas09H3_7
Sigma
"Influenza - Orthomyxovidiae, H3N2 (A/Brisbane/10/2007)"
DYASLRSLVASSGTLEFNN
Seas09H3_7
8
Seas09H3_8
Sigma
"Influenza - Orthomyxovidiae, H3N2 (A/Brisbane/10/2007)"
SSGTLEFNNESFNWTGVTQ
Seas09H3_8
9
Seas09H3_9
Sigma
"Influenza - Orthomyxovidiae, H3N2 (A/Brisbane/10/2007)"
SFNWTGVTQNGTSSACIRR
Seas09H3_9
10
Seas09H3_10
Sigma
"Influenza - Orthomyxovidiae, H3N2 (A/Brisbane/10/2007)"
GTSSACIRRSNNSFFSRLN
Seas09H3_10
11
Seas09H3_11
Sigma
"Influenza - Orthomyxovidiae, H3N2 (A/Brisbane/10/2007)"
NNSFFSRLNWLTHLKFKYP
Seas09H3_11
12
Seas09H3_12
Sigma
"Influenza - Orthomyxovidiae, H3N2 (A/Brisbane/10/2007)"
LTHLKFKYPALNVTMPNNE
Seas09H3_12
13
Seas09H3_13
Sigma
"Influenza - Orthomyxovidiae, H3N2 (A/Brisbane/10/2007)"
LNVTMPNNEKFDKLYIWGV
Seas09H3_13
14
Seas09H3_14
Sigma
"Influenza - Orthomyxovidiae, H3N2 (A/Brisbane/10/2007)"
FDKLYIWGVHHPGTDNDQI
Seas09H3_14
15
Seas09H3_15
Sigma
"Influenza - Orthomyxovidiae, H3N2 (A/Brisbane/10/2007)"
HPGTDNDQIFPYAQASGRI
Seas09H3_15
16
Seas09H3_16
Sigma
"Influenza - Orthomyxovidiae, H3N2 (A/Brisbane/10/2007)"
PYAQASGRITVSTKRSQQT
Seas09H3_16
17
Seas09H3_17
Sigma
"Influenza - Orthomyxovidiae, H3N2 (A/Brisbane/10/2007)"
VSTKRSQQTVIPNIGSRPR
Seas09H3_17
18
Seas09H3_18
Sigma
"Influenza - Orthomyxovidiae, H3N2 (A/Brisbane/10/2007)"
IPNIGSRPRVRNIPSRISI
Seas09H3_18
19
Seas09H3_19
Sigma
"Influenza - Orthomyxovidiae, H3N2 (A/Brisbane/10/2007)"
RNIPSRISIYWTIVKPGDI
Seas09H3_19
20
Seas09H3_20
Sigma
"Influenza - Orthomyxovidiae, H3N2 (A/Brisbane/10/2007)"
WTIVKPGDILLINSTGNLI
Seas09H3_20
72 7 Kbytes .Supplementary data files not provided
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