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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jan 08, 2013 |
| Title |
Illumina MiSeq (Drosophila melanogaster) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Drosophila melanogaster |
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| Submission date |
Jan 08, 2013 |
| Last update date |
Feb 20, 2019 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (1079)
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GSM1061000, GSM1061001, GSM1061002, GSM1061003, GSM1061004, GSM1061005
GSM1061006, GSM1061007, GSM1174404, GSM1174405, GSM1174406, GSM1174407, GSM1467707, GSM1477472, GSM1517419, GSM1517420, GSM1517421, GSM1517422, GSM1531190, GSM1531191, GSM1531192, GSM1531193, GSM1531194, GSM1531195, GSM1531196, GSM1531197, GSM1545885, GSM1545888, GSM1545891, GSM1545892, GSM1550732, GSM1600200, GSM1600201, GSM1600202, GSM1600203, GSM1600204, GSM1600205, GSM1600206, GSM1600207, GSM1642749, GSM1642750, GSM1645026, GSM1645027, GSM1645028, GSM1645029, GSM1645030, GSM1645031, GSM1645032, GSM1645033, GSM1645034, GSM1645035, GSM1645036, GSM1645037, GSM1645038, GSM1645039, GSM1645040, GSM1645041, GSM1645042, GSM1645043, GSM1654861, GSM1654862, GSM1654863, GSM1654867, GSM1654868, GSM1654869, GSM1673357, GSM1673358, GSM1673359, GSM1697236, GSM1697237, GSM1697238, GSM1697239, GSM1697240, GSM1704896, GSM1704897, GSM1704898, GSM1704899, GSM1708979, GSM1708980, GSM1708981, GSM1708982, GSM1708983, GSM1708984, GSM1708985, GSM1708986, GSM1817085, GSM1817086, GSM1817087, GSM1817088, GSM1817089, GSM1817090, GSM1817091, GSM1817092, GSM1833120, GSM1833121, GSM1833131, GSM1833133, GSM1833135, GSM1833136, GSM1833137, GSM1833138, GSM1833139, GSM1833176, GSM1833177, GSM1833178, GSM1833179, GSM1833180, GSM1833181, GSM1833182, GSM1833183, GSM1833188, GSM1833189, GSM1833190, GSM1833191, GSM1862116, GSM1862117, GSM1862118, GSM1862119, GSM1862120, GSM1862121, GSM1863752, GSM1863753, GSM1867915, GSM1867916, GSM1867917, GSM1886344, GSM1886345, GSM1886346, GSM1886347, GSM1886348, GSM1886349, GSM1900399, GSM1900400, GSM1900401, GSM1900402, GSM1937224, GSM1937225, GSM1937226, GSM1937227, GSM1937228, GSM1937229, GSM1937230, GSM1937231, GSM1937240, GSM1937241, GSM1937242, GSM1937243, GSM2050761, GSM2050762, GSM2050763, GSM2050764, GSM2050765, GSM2050766, GSM2050767, GSM2050768, GSM2050769, GSM2050770, GSM2050771, GSM2050772, GSM2050773, GSM2050774, GSM2050775, GSM2050776, GSM2050777, GSM2050778, GSM2050779, GSM2050780, GSM2050781, GSM2050782, GSM2050783, GSM2050784, GSM2050785, GSM2050786, GSM2050787, GSM2050788, GSM2050789, GSM2050790, GSM2050791, GSM2050792, GSM2050793, GSM2050794, GSM2050795, GSM2050796, GSM2050797, GSM2050798, GSM2050799, GSM2050800, GSM2050801, GSM2050802, GSM2050803, GSM2050804, GSM2050805, GSM2050806, GSM2050807, GSM2050808, GSM2050809, GSM2050810, GSM2050811, GSM2050812, GSM2050813, GSM2050814, GSM2050815, GSM2050816, GSM2091061, GSM2091062, GSM2091063, GSM2091064, GSM2135641, GSM2135642, GSM2135643, GSM2135644, GSM2135645, GSM2135646, GSM2135647, GSM2135648, GSM2135649, GSM2135650, GSM2135651, GSM2135652, GSM2135653, GSM2135654, GSM2152422, GSM2152423, GSM2152424, GSM2152425, GSM2152426, GSM2152427, GSM2152428, GSM2152429, GSM2152430, GSM2152431, GSM2152432, GSM2152433, GSM2152434, GSM2152435, GSM2152436, GSM2152437, GSM2152438, GSM2152439, GSM2152440, GSM2152441, GSM2152442, GSM2152443, GSM2152444, GSM2152445, GSM2152446, GSM2152447, GSM2152448, GSM2152449, GSM2152450, GSM2152451, GSM2152452, GSM2152726, GSM2152727, GSM2152728, GSM2152729, GSM2152730, GSM2152731, GSM2152732, GSM2152733, GSM2152734, GSM2152735, GSM2152736, GSM2152737, GSM2152738, GSM2183921, GSM2183922, GSM2183923, GSM2183927, GSM2183928, GSM2183929, GSM2183933, GSM2183934, GSM2183935, GSM2197635, GSM2197636, GSM2197637, GSM2197638, GSM2197639, GSM2197640, GSM2197641, GSM2197642, GSM2213972, GSM2214166, GSM2214167, GSM2214168, GSM2214169, GSM2214170, GSM2214171, GSM2214172, GSM2214173, GSM2214174, GSM2214175, GSM2214176, GSM2214177, GSM2214178, GSM2214179, GSM2214180, GSM2214181, GSM2214182, GSM2214183, GSM2214184, GSM2214185, GSM2214186, GSM2224724, GSM2224725, GSM2224726, GSM2224727, GSM2238594, GSM2238595, GSM2238596, GSM2238597, GSM2238598, GSM2238599, GSM2238600, GSM2258654, GSM2258655, GSM2258656, GSM2258657, GSM2265950, GSM2265951, GSM2265952, GSM2265953, GSM2283709, GSM2283710, GSM2283711, GSM2283712, GSM2283713, GSM2283714, GSM2283715, GSM2283716, GSM2283717, GSM2283718, GSM2283719, GSM2283720, GSM2283721, GSM2283722, GSM2283723, GSM2283724, GSM2283725, GSM2285892, GSM2285893, GSM2285894, GSM2285895, GSM2297726, GSM2297727, GSM2297728, GSM2297729, GSM2300778, GSM2300779, GSM2300780, GSM2300781, GSM2300782, GSM2300783, GSM2300784, GSM2300785, GSM2310338, GSM2310339, GSM2332920, GSM2332921, GSM2332922, GSM2332923, GSM2332924, GSM2332925, GSM2340378, GSM2340379, GSM2340380, GSM2340381, GSM2340382, GSM2340383, GSM2340384, GSM2340385, GSM2340386, GSM2340387, GSM2340388, GSM2340389, GSM2350412, GSM2350413, GSM2350414, GSM2350415, GSM2350416, GSM2350417, GSM2350418, GSM2350419, GSM2350420, GSM2350421, GSM2463158, GSM2463159, GSM2463160, GSM2463161, GSM2486669, GSM2486670, GSM2537243, GSM2537244, GSM2537245, GSM2537246, GSM2537247, GSM2537248, GSM2537249, GSM2537250, GSM2537251, GSM2537252, GSM2537253, GSM2537254, GSM2537255, GSM2537256, GSM2537257, GSM2537258, GSM2537259, GSM2537260, GSM2537261, GSM2537262, GSM2537263, GSM2537264, GSM2537265, GSM2537266, GSM2537267, GSM2537268, GSM2537269, GSM2537270, GSM2537271, GSM2537272, GSM2537273, GSM2537274, GSM2537308, GSM2537309, GSM2537310, GSM2545925, GSM2545926, GSM2545927, GSM2545928, GSM2545929, GSM2545930, GSM2545931, GSM2545932, GSM2545933, GSM2545934, GSM2545935, GSM2545936, GSM2552029, GSM2552030, GSM2552031, GSM2552033, GSM2552035, GSM2552037, GSM2552038, GSM2552040, GSM2552057, GSM2552058, GSM2552059, GSM2552060, GSM2552061, GSM2552062, GSM2552063, GSM2552064, GSM2552065, GSM2552066, GSM2552067, GSM2552068, GSM2552069, GSM2552070, GSM2552071, GSM2552072, GSM2552073, GSM2552074, GSM2553054, GSM2553055, GSM2553056, GSM2553057, GSM2553058, GSM2553059, GSM2553060, GSM2553061, GSM2553062, GSM2553063, GSM2553064, GSM2553065, GSM2553066, GSM2553067, GSM2553068, GSM2553069, GSM2553070, GSM2553071, GSM2553072, GSM2553073, GSM2553074, GSM2553075, GSM2553076, GSM2553077, GSM2553078, GSM2553079, GSM2553080, GSM2553081, GSM2553082, GSM2553083, GSM2553084, GSM2553085, GSM2553086, GSM2553087, GSM2553088...
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| Series (115)
|
| GSE43360 |
Multiple roles for Piwi in silencing Drosophila transposons |
| GSE47006 |
Expression profile and RNA Polymerase II occupancy of transposable elements among knock down of the piRNA pathway components in OSCs |
| GSE55257 |
H3K27 modifications define segmental regulatory domains in the Drosophila bithorax complex. |
| GSE60384 |
Extensive translation of small Open Reading Frames revealed by Poly-Ribo-Seq |
| GSE61931 |
Adenylation of maternally inherited microRNAs by Wispy |
| GSE62668 |
Paternal diet defines offspring chromatin state and intergenerational obesity. |
| GSE63333 |
Genome-wide binding patterns of group B Sox proteins in four Drosophila species |
| GSE63488 |
Maternal microRNAs in Drosophila melanogaster |
| GSE65566 |
Multiple hierarchies of Polycomb targeting to Drosophila genome (Part 1) |
| GSE67236 |
Cis regulatory effects on A-to-I RNA editing in Drosophila melanogaster, Drosophila sechellia and their F1 hybrids |
| GSE67339 |
A genome-wide CRISPR library for high-throughput genetic screening in Drosophila cells |
| GSE67725 |
Antisense transcription of retro transposable elements in Drosophila: The origin of endogenous small interfering RNA precursors |
| GSE68471 |
EnD-Seq and AppEnD: Sequencing 3' ends to identify non-templated tails and degradation intermediates |
| GSE69293 |
Krimper enforces an antisense bias on piRNA pools by binding AGO3 in the Drosophila germline |
| GSE69625 |
Somatic Primary piRNA Biogenesis Driven by Cis-Acting RNA Elements and Trans- Acting Yb |
| GSE69796 |
Roles of Cofactors and Chromatin Accessibility in Hox Protein Target Specificity |
| GSE70744 |
Multiple hierarchies of Polycomb targeting to Drosophila genome (Part2) |
| GSE71368 |
Panoramix enforces piRNA-dependent co-transcriptional silencing (ChIP-Seq) |
| GSE71369 |
Panoramix enforces piRNA-dependent co-transcriptional silencing (GRO-Seq) |
| GSE71371 |
Panoramix enforces piRNA-dependent co-transcriptional silencing (RNA-Seq) |
| GSE71372 |
Panoramix enforces piRNA-dependent co-transcriptional silencing (small RNA-Seq) |
| GSE71374 |
Panoramix enforces piRNA-dependent co-transcriptional silencing |
| GSE72510 |
Polytene Hi-C |
| GSE72512 |
Stable Chromosome Condensation Revealed by Chromosome Conformation Capture |
| GSE72666 |
High-throughput sequence data of ChIP performed with anti-SMARCAD1 (ASNA) or anti-CBP actibodies. |
| GSE73098 |
Chameau Activates Transcription with Enhancer of Acetyltransferase Chameau (EAChm) in vitro |
| GSE73668 |
Methylation of histone H4 lysine 20 by PR-Set7 ensures the integrity of late replicating sequence domains in Drosophila |
| GSE74907 |
Examination of SUUR and Pc chromatin proteins in slivary glands in presence or absence of SuUR mutation using DamID technique |
| GSE74908 |
Functional dissection of Drosophila melanogasterSUUR protein influence on H3K27me3 profile |
| GSE74909 |
Repressive Histone Marks Renewal Impedes Replication Fork Progression and Contributes To Late Replication in Drosophila |
| GSE77369 |
Genome-wide single molecule footprinting reveals high RNA polymerase II turnover at paused promoters |
| GSE79296 |
m6A controls neurogenesis and sex determination in Drosophila via its nuclear reader protein YT521-B [MeRIP-Seq, S2R+ cells] |
| GSE79297 |
m6A controls neurogenesis and sex determination in Drosophila via its nuclear reader protein YT521-B |
| GSE80738 |
Achilles is a circadian clock controlled gene that regulates innate immune function in Drosophila |
| GSE81434 |
Piwi modulates chromatin accessibility by regulating multiple factors including histone H1 to repress transposons |
| GSE81456 |
Genome-wide maps of CREB/CRTC binding in Drosophila mushroom body. |
| GSE82128 |
Drosophila retrotransposon and inverted repeat-derived endogenous siRNAs are differentially processed in distinct cellular locations |
| GSE83247 |
Multiple hierarchies of Polycomb targeting to Drosophila genome (Part 3) |
| GSE83248 |
Interdependence of PRC1 and PRC2 for recruitment to Polycomb Response Elements |
| GSE83714 |
Context-dependent effects of HP1 assessed in high throughput |
| GSE83715 |
HP1 |
| GSE83731 |
mTAIL-seq reveals dynamic poly(A) tail regulation in oocyte-to-embryo development [RNA-seq and mTAIL-seq Human and Drosphila] |
| GSE83732 |
mTAIL-seq reveals dynamic poly(A) tail regulation in oocyte-to-embryo development |
| GSE83975 |
Genome-wide Identification of Neuronal Activity-regulated Genes in Drosophila [Elav_TrpA1_ATAC] |
| GSE83976 |
Genome-wide Identification of Neuronal Activity-regulated Genes in Drosophila |
| GSE84502 |
Genome-wide maps of GlcNAc bound proteins and Pho ChIP-seq in Drosophila S2 cells and pupae. |
| GSE84537 |
DMS-MaPseq: A genome-wide or targeted approach for RNA structure probing in vivo |
| GSE85155 |
DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome [uvCLAP CLIP-seq] |
| GSE85164 |
DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome |
| GSE85191 |
Widespread transcriptional pausing and elongation control at enhancers |
| GSE85374 |
Direct interrogation of the role of H3K9 in metazoan heterochromatin function |
| GSE85764 |
RNA-Chromatin Interactome Reveals ncRNA Functions for Transcription Regulation in 3D Genome Organization |
| GSE85863 |
Transcriptome analysis of Drosophila Kr-h1 mutants |
| GSE86205 |
Tissue-specific DamID profiling of chromatin proteins in Drosophila melanogaster |
| GSE87509 |
ChIP-seq of Atrophin in Drosophila S2 cells |
| GSE87792 |
A mutually exclusive stem loop arrangement in roX2 RNA is essential for X chromosome regulation in Drosophila |
| GSE88866 |
The development of Drosophila melanogaster during space flight |
| GSE93828 |
E(Pc) ChIP-seq experiment in fruitfly testis somatic gonadal cells and RNA-seq experiment in fruitfly testis |
| GSE96654 |
Epigenetic Drift of H3K27me3 in Aging Links Glycolysis to Healthy Longevity |
| GSE96922 |
Histone gene replacement reveals a post-transcriptional role for H3K36 in maintaining metazoan transcriptome fidelity |
| GSE97127 |
Genome-wide profiling of gene expression and transcription factors binding reveals new insights into the mechanisms of gene regulation during Drosophila spermatogenesis [ChIP-Seq] |
| GSE97129 |
Genome-wide profiling of gene expression and transcription factors binding reveals new insights into the mechanisms of gene regulation during Drosophila spermatogenesis [RNA-Seq] |
| GSE97130 |
Genome-wide analysis of Su(var)3-9 distribution in chromosomes of Drosophila melanogaster [RNA-Seq_SuVar] |
| GSE97176 |
Genome-wide profiling of gene expression and transcription factors binding reveals new insights into the mechanisms of gene regulation during Drosophila spermatogenesis [DamID] |
| GSE97182 |
Genome-wide profiling of gene expression and transcription factors binding reveals new insights into the mechanisms of gene regulation during Drosophila spermatogenesis |
| GSE97216 |
Tis11 mediated mRNA degradation regulates intestinal stem cell quiescence in Drosophila melanogaster |
| GSE97351 |
Genome-wide analysis of Su(var)3-9 distribution in chromosomes of Drosophila melanogaster |
| GSE98188 |
Flipping the switch on Sex-lethal expression: Sister of Sex-lethal antagonizes Sxl-dependent alternative splicing to maintain a male-specific gene expression pattern in Drosophila (iCLIP) |
| GSE98189 |
Flipping the switch on Sex-lethal expression: Sister of Sex-lethal antagonizes Sxl-dependent alternative splicing to maintain a male-specific gene expression pattern in Drosophila |
| GSE98944 |
Gut microbiota analysis of kdm5 mutant and the flies with KDM5 knockdown in intestine tissue |
| GSE98945 |
The histone demethylase KDM5 protein shapes the gut microbiome and regulates innate immunity pathway |
| GSE104084 |
Measuring RNA editing through mmPCR-seq in Drosophila adapting to divergent microclimates and raised at different temperatures |
| GSE104085 |
Regulation of gene expression and RNA editing in Drosophila adapting to divergent microclimates |
| GSE104972 |
Identifying RNA cargo of Drosophila S2 exosomes |
| GSE106105 |
PGAM5 promotes lasting FoxO activation after developmental mitochondrial stress and extends lifespan in Drosophila |
| GSE106759 |
Context-dependent effects of Acf1 assessed in high throughput |
| GSE108329 |
Piwi suppresses transcription of Brahma-dependent transposons via Maelstrom in ovarian somatic cells |
| GSE109133 |
RNA bisulfite sequencing of candidate tRNAs in Drosophila melanogaster |
| GSE109355 |
Multiplex Chromatin Interactions with Single Molecule Precision |
| GSE112737 |
Piwi knockdown in Drosophila Intestinal Stem Cells |
| GSE112968 |
Somatic piRNA pathway prevents transgenerational germline transposition [circularDNA-seq] |
| GSE112972 |
Somatic piRNA pathway prevents transgenerational germline transposition |
| GSE114387 |
Functional annotation of transcriptional factors transactivation domains |
| GSE117217 |
Remapping the SRA: Drosophila melanogaster RNA-Seq data from the Sequence Read Archive |
| GSE117703 |
Lysine 27 of replication-independent histone H3.3 is required for Polycomb target gene silencing but not for gene activation |
| GSE121605 |
Requirements for multivalent Yb body assembly in transposon silencing in Drosophila |
| GSE121855 |
Application of Chromatrap® Solid-State Chromatin Immunoprecipitation (ChIP) for epigenetic profiling of insects |
| GSE122470 |
Foxo signaling declines with age |
| GSE123052 |
Makorin 1 controls embryonic patterning by alleviating Bruno1-mediated repression of oskar translation |
| GSE123455 |
Protein-RNA-Chromatin Interactions Reveal Nuclear RNA Architecture Functions in Transcriptional Condensation and Chromatin Folding |
| GSE124254 |
Direct and widespread role for the nuclear receptor EcR in mediating the response to ecdysone in Drosophila |
| GSE124504 |
microRNA-252 and FoxO regulate inflammaging through dual inhibition on Dawdle/Acticin of TGF-β pathway in Drosophila |
| GSE124785 |
A chemical genetic method for monitoring genome-wide dynamics of O-GlcNAc turnover on chromatin-associated proteins. |
| GSE125385 |
Loss of a proteostatic checkpoint in intestinal stem cells contributes to age-related epithelial dysfunction |
| GSE128203 |
Essential roles of Windei and nuclear monoubiquitination of Eggless/SETDB1 in transposon silencing |
| GSE128924 |
Distinct and collaborative functions of Yb and Armitage in transposon-targeting piRNA biogenesis |
| GSE131950 |
Nuclear RNA export factor variant initiates piRNA-guided co-transcriptional silencing |
| GSE134250 |
Binding of SU(VAR)3-9 partially depends on SETDB1 in the chromosomes of Drosophila melanogaster |
| GSE147619 |
Developmental regulation of Canonical and small ORF translation from mRNAs |
| GSE154310 |
Comparison of mitochondrial transcription errors in wild type and mutant mitochondrial RNA polymerase overexpression flies |
| GSE154645 |
Temporal inhibition of chromatin looping and enhancer accessibility during neuronal remodeling. |
| GSE155579 |
SetDB1 and Su(var)3-9 play non-overlapping roles in somatic cell chromosomes of Drosophila melanogaster [DamID-seq] |
| GSE155580 |
SetDB1 and Su(var)3-9 play non-overlapping roles in somatic cell chromosomes of Drosophila melanogaster [RNA-seq] |
| GSE155581 |
SetDB1 and Su(var)3-9 play non-overlapping roles in somatic cell chromosomes of Drosophila melanogaster |
| GSE156577 |
Drosophila CRTC promotes starvation resistance by modulating one-carbon metabolism and insulin signaling |
| GSE158082 |
Piwi–piRNA complexes induce stepwise changes in nuclear architecture at target loci |
| GSE158764 |
Histone lysine methyltransferase Pr-set7/SETD8 promotes neural stem cell reactivation |
| GSE159294 |
Nucleosome assembly protein-1 (NAP-1) is regulator of histone H1 acetylation |
| GSE162379 |
Single-cell RNAsequencing of Drosophila PI Circadian Output Cells |
| GSE197256 |
Despite its sequence identity with canonical H4, Drosophila H4r product is enriched at specific chromatin regions |
| GSE204740 |
Global Stable-isotope Tracing Metabolomics Reveals System-wide Metabolic Alternations in Aging Drosophila |
| GSE220550 |
R7-dependent transcription in the developing Drosophila retina |
| GSE221154 |
Quantitative acetylomics reveals substrates of lysine acetyltransferase GCN5 in adult and aging Drosophila |
| GSE225970 |
Tet-dependent 5-hydroxymethyl-Cytosine modification of mRNA regulates the axon guidance genes robo2 and slit in Drosophila [ChIP LBF] |
| GSE225980 |
Tet-dependent 5-hydroxymethyl-Cytosine modification of mRNA regulates axon guidance genes in Drosophila |
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| Supplementary data files not provided |
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