NC_005290 AY781172
   1 TGTTTTAAAAAATTTTTAAAACAAACAGCTTTCGTTCGAATTCAAAACAG 50
     ||*|||||||||||||||||*||||||||||||||||**|*****|||||
   1 TGATTTAAAAAATTTTTAAATCAAACAGCTTTCGTTCCGAAATTTAACAG 50

  51 CTTTCTTTCAAAACAGCTTTCAGTTCTTGGAAACGCTTTTAA---TAGCT 97
     |||||******|**|*||||||********||**|||||*||***|**|*
  51 CTTTC------AGAAACTTTCA--------AACAGCTTTCAAAGTTTTCG 86

  98 TTCAAAATTTATTTTGCATTCATCCTGATTGAACCCGGAAAAAGGGAGTG 147
     |||****|***|||*|*||***||||||||||||||||*|||||||||||
  87 TTCGTCCTGGTTTTCGTATCTTTCCTGATTGAACCCGGCAAAAGGGAGTG 136

 148 TGATTCAAAGCGCACCATATATTTCAGGAGAGTGATTGTTGTGTAGGTCA 197
     |||||||||||||||||||||*||||||*|||***||***||**|*|**|
 137 TGATTCAAAGCGCACCATATACTTCAGG-GAGATTTTTCAGTACAAGAGA 185

 198 TTCTTGTGTTGGAAAT-TTCTGTCACAAATTTCAAATGCCATTGATTCTT 246
     *||||*******||*|*|||**|***|*|*||*|||||||*|||||||||
 186 ATCTTAGCAGTAAAGTATTCAATTTGATACTT-AAATGCCGTTGATTCTT 234

 247 CTTTGGTTTTGCTTTCTTTGCATGATTTACGTGATTTTGAAGTTGGAGTA 296
     ||||||*||||||||*||||**||||||**||||||||||||||*|||||
 235 CTTTGGATTTGCTTTGTTTGTGTGATTTGTGTGATTTTGAAGTTAGAGTA 284

 297 TACATACGTGGTTAAGCCCTTTCTTAAAACTGCGTTTTTAAACACAACTT 346
     ||||||||||||||||||||||||*|*||||||||||||||||||*||||
 285 TACATACGTGGTTAAGCCCTTTCTAAGAACTGCGTTTTTAAACACTACTT 334

 347 CACACTATTCAGACGAGTATTTGCGAGAGTACTCAGGCATTCGCTGGTTG 396
     ||||*|||||**|||||||*|||||*|***|||||||*||*||*||||||
 335 CACATTATTCTAACGAGTACTTGCGTGTTCACTCAGGTATCCGTTGGTTG 384

 397 CACACTTTCAAGGAGTATAGAGAGCATACGATTTTCTTTAACTTTCCTTC 446
     **||||||*|||||*|||||||||||*||*||||**||*||*||||||||
 385 GGCACTTTTAAGGAATATAGAGAGCACACTATTTGGTTCAATTTTCCTTC 434

 447 TTTTTACTGTAGTCCGGGATCTGGAATTAAACACACACTCTCGGAACTCA 496
     ||||||*|||***||*||*||||||||*|||||*|||||*||*|||||*|
 435 TTTTTATTGTGCACCAGGTTCTGGAATCAAACATACACTTTCTGAACTTA 484

 497 TTAAGATGGAAGCAGAACGGGTTAATTTGACCAAAACTGAAACTATACCT 546
     |*||*|||||*|*|||*||*||*||||||||*||||||||*|||||*|||
 485 TCAAAATGGAGGAAGAGCGAGTCAATTTGACAAAAACTGAGACTATTCCT 534

 547 AAAGACATTCTGCTTGAGAGAGCAAAGAATTATCGTGTTGCACAGGAAAG 596
     ||*||||||*||||||||||*||||||||*|||||||||||*|||||*||
 535 AAGGACATTTTGCTTGAGAGGGCAAAGAACTATCGTGTTGCGCAGGAGAG 584

 597 CAATAAATCTTTGTTGCCGCAGGTTGAGGATCTTTATGAAGTTTCAAAGT 646
     |||*|*|||||||*||||*||*|||||*||||||||||||||*|||||*|
 585 CAACAGATCTTTGCTGCCACAAGTTGAAGATCTTTATGAAGTCTCAAAAT 634

 647 GGAAGCGGGCTATTTCTTCTCTTCAGAAAGGAGAACCTAGCTTTGTTCGG 696
     |||||*|*||**||||*|||||*||*||||||||*||*||||||||*||*
 635 GGAAGAGAGCCTTTTCATCTCTACAAAAAGGAGAGCCCAGCTTTGTGCGA 684

 697 ACTAGTGAGGTTGCCATAGGAACTATGTCTGGTGCTGGGAAAATGAGGAT 746
     ||*||*||**||||*||*||*||||||||*|||||*||*||*|||||*||
 685 ACCAGCGAAATTGCTATGGGGACTATGTCCGGTGCAGGAAAGATGAGAAT 734

 747 CAAAGTTCCAGTAGTCAAGAGCTACGAGGAAGAAGTTGCAGACATGCGCC 796
     *|||||||||||||||||||*||||||*||||||||*||*|||||||||*
 735 AAAAGTTCCAGTAGTCAAGAACTACGAAGAAGAAGTAGCGGACATGCGCT 784

 797 TGAGCCAAAAAGTTAGGGCAAAAGCTGACCAGATTGTTGTAGCTGCTATT 846
     ||||||||||***|||*||||||||*||*||||||||*||*|||||*|||
 785 TGAGCCAAAAGACTAGAGCAAAAGCCGATCAGATTGTCGTTGCTGCAATT 834

 847 GAAATCGTTAACGATGGATTTGCTTCTGTGAACTCAGATGTCACGCTAGC 896
     |||||*||*||*|||||*||||||||*|||||*||||||||*|||||*||
 835 GAAATAGTGAATGATGGGTTTGCTTCAGTGAATTCAGATGTTACGCTTGC 884

 897 AGCTTCTCTGTATGATAAGAGGCACAAGACCATAGCCAGTTCTTTTAAAG 946
     |||*|||||*||||||||*|||||||||||*|||||*||||||||*||*|
 885 AGCCTCTCTATATGATAAAAGGCACAAGACGATAGCTAGTTCTTTCAAGG 934

 947 GGGCGTATGCCTCTAGAGCGAGTGGAACACCCAGTCATGTTGTCTTTTAT 996
     |*||*|||||*||*|||||*|||||*||*||||||||||||||*|||||*
 935 GAGCATATGCTTCCAGAGCAAGTGGGACGCCCAGTCATGTTGTTTTTTAC 984

 997 CCAACTCACAGAGTTGCTCCTGGTGACAATCCAAACGATACTCTTGAATT 1046
     ||*|||||||||||||||||*|||||*|||||*||*||*|||||*|||*|
 985 CCTACTCACAGAGTTGCTCCCGGTGATAATCCGAATGACACTCTGGAACT 1034

1047 ATCAGCAGTTAGTAGAGATTCTGACTTTGATGAGAACTTCACTCTAGCAA 1096
     *||||||||*||*||*||*|||||*|||||||||||*||||||*|*||||
1035 TTCAGCAGTCAGCAGGGACTCTGATTTTGATGAGAATTTCACTTTGGCAA 1084

1097 ATTTCTCTGTTAGGACTGTCTATGCTAAAGCTAAGGGTCCAGAGGTCATT 1146
     ||||*||*||*||*|||||*|||||*||*|||||*||*||*||*||*||*
1085 ATTTTTCAGTGAGAACTGTGTATGCCAAGGCTAAAGGCCCGGAAGTTATC 1134

1147 CGAGAAACTCAACACTTGCTGAATTGCAAGTTGGAGGACTTAGTTAAGGC 1196
     *||||||||||*||||||||*|||||||||*|||||||*||*||*||*||
1135 AGAGAAACTCAGCACTTGCTAAATTGCAAGATGGAGGATTTGGTCAAAGC 1184

1197 GCAGCAATTTGCTTCTGATGAGCAAGTAGTTTTGGCTTTACCAAGAGTTT 1246
     *|||||||||||*||||||||||||||*||*||||||||*||*|||||||
1185 TCAGCAATTTGCATCTGATGAGCAAGTTGTGTTGGCTTTGCCCAGAGTTT 1234

1247 ACCCGAAAGTTAATTTGGACAATTATGTTATGCCAGGCCCTGATAATGTG 1296
     ||||*||||||||||||||**||||||||||||||||*||*||*|*|*|*
1235 ACCCAAAAGTTAATTTGGATGATTATGTTATGCCAGGACCGGACAGTATT 1284

1297 ACTAAGCAAGAAGGGGAGTACTCAGCCAAAGGCATCCATTTCAGAAAACC 1346
     ||*||||||||*||*|||||*||*|*|||*|||||**|*||*|**||*||
1285 ACAAAGCAAGAGGGAGAGTATTCGGTCAAGGGCATATACTTTAAGAAGCC 1334

1347 AATTTTTAATGGGAGCGAAATTGTGCTAAATGCAACTTCCAAATTGCCCA 1396
     ||||||*||*|||||*||*|||||*||||||||*||**|||||*||*|*|
1335 AATTTTCAAAGGGAGTGAGATTGTTCTAAATGCGACCCCCAAAATGACAA 1384

1397 GTAGCAAGTCCAGAGGCATTTCCAAAAGTGAAAAGATTGATGACCTTGGT 1446
     ***|*||*||*|*|||**|*||**|*****|||||***||**|*|||||*
1385 AAGGGAAATCTAAAGGTCTGTCTGAGGAACAAAAG---GACAATCTTGGA 1431

1447 TGCATGTCTGATGAAGAAGGAATTGATTACAAGTACGGGCAAGCACTTAT 1496
     ||**|*||*|||||*||||||||*||||||||*||*||||||||*||*||
1432 TGTTTATCAGATGAGGAAGGAATAGATTACAAATATGGGCAAGCTCTCAT 1481

1497 GGAAGAAGATGTGCTAGAGGCCCAAGTTGACATGTTCCCTTTGCACAATG 1546
     ||||||*||*|||||*||*|||||*|||||*|||||*||*||||||||||
1482 GGAAGAGGACGTGCTTGAAGCCCAGGTTGATATGTTTCCCTTGCACAATG 1531

1547 TAGCGGAAACCATGCGTTTGCTCTTTTCAGGAGTTTCCACAATCCCCATG 1596
     **|*||||||*|||||*|||||||||||*|||||*||*|||||*||||||
1532 CGGTGGAAACAATGCGCTTGCTCTTTTCTGGAGTGTCAACAATTCCCATG 1581

1597 AACGTGGTGGAGGGAACCAAGATAAGTGTGGCATACTTGAATGAACTTGC 1646
     |||||*|||||*||*||||||||||||||||**||*|||||||||*|*||
1582 AACGTTGTGGAAGGTACCAAGATAAGTGTGGTTTATTTGAATGAATTAGC 1631

1647 CACTCACCCAGGCGTGCATGTCCCGATTCTGAACATGCTTGGGAGGATAC 1696
     ||||||*||*||*|||||||||||*||*||*||*|||*|*||||**||||
1632 CACTCATCCTGGTGTGCATGTCCCCATACTAAATATGTTAGGGAAAATAC 1681

1697 CAGGGTCCATATTAGCAAGAGTACACTGTGAAGTGGCTCCCACTTGTGGA 1746
     ||||*||*|||*|*|||||||||||*||||||||||||||*||*||||||
1682 CAGGATCTATACTTGCAAGAGTACATTGTGAAGTGGCTCCTACATGTGGA 1731

1747 ATAGGATTGGCCGCCACTTACGTGGAGGGAAATGAGAGTGCGGCACTTGG 1796
     ||*||**||||*|||||*||||||||*||||||||||||||*||||||||
1732 ATTGGGCTGGCAGCCACCTACGTGGAAGGAAATGAGAGTGCAGCACTTGG 1781

1797 CACTGATCTTGGGAGGCTTTTGGGAATACAACACGTCAAATGGAATCCTG 1846
     |*|*|||*|*||*||||||*|*|||||||||||*|||||*|||||*||*|
1782 CTCCGATTTAGGCAGGCTTCTTGGAATACAACATGTCAAGTGGAACCCAG 1831

1847 CAATTGAACCAGTAAAGGAATTTCGTTTCAAGCCCTTTTCTTGTGTTGAT 1896
     ||||||||||*||*||*||*||*||*||||||||*|||||*|||||*|||
1832 CAATTGAACCTGTGAAAGAGTTCCGCTTCAAGCCATTTTCGTGTGTGGAT 1881

1897 TGGTGGAATATGCATTACTTGGGTTCTAGCAAGTTTTCGCCAGTTCTGGC 1946
     |||||||||||||||||*||*||**|*|||||||||||*||*||**||||
1882 TGGTGGAATATGCATTATTTAGGAACCAGCAAGTTTTCACCTGTCTTGGC 1931

1947 GTTTGTCTGCCTTTCAAAATGGATTAATCCACCCAAGGGCGAATGCAAGA 1996
     *||||||||*||*||*||*||||*||||||*||*||*||*||*|||||||
1932 ATTTGTCTGTCTATCCAAGTGGAATAATCCTCCTAAAGGAGAGTGCAAGA 1981

1997 TGTCTTATGCGCTCTATTTTGAGCCAGATATAATTCTGCCCCGCCAGATA 2046
     |||||*||||*||||||||||||||||||||*|||*||||*|||||*|||
1982 TGTCTCATGCTCTCTATTTTGAGCCAGATATTATTTTGCCGCGCCAAATA 2031

2047 GCATCTCTCAACTCTGTGCCTAGCTTTATGCTGAGGAAAGAACTGGGGAC 2096
     ||||||||*||*||**|*|||*||||||||||*|||||*|||*|*|||||
2032 GCATCTCTAAATTCAATTCCTGGCTTTATGCTTAGGAAGGAATTAGGGAC 2081

2097 TCTGAGTTTTAAACAAGGTGAGAGACGGGCTTATGCTTTTGAGGTTAATT 2146
     **|||||||*||*||*||*||*|||||*||||||||*|||||||||||*|
2082 CTTGAGTTTCAAGCAGGGAGAAAGACGAGCTTATGCCTTTGAGGTTAACT 2131

2147 TTGGAAAACCACAAGTGGAGGGAAAGAGTGTGACTCTCAATTTTGCCTCT 2196
     ||||*|||||||||||*||*||*||*|||||*||*||*||||||||*|||
2132 TTGGTAAACCACAAGTTGAAGGGAAAAGTGTCACCCTTAATTTTGCTTCT 2181

2197 GCATATTGTGGGCTGAGCCAATACATGGAATCCGACATAGTGATCGACTT 2246
     ||||||||||||||*||*||||||||||||||*||*|||*|*||*|||||
2182 GCATATTGTGGGCTAAGTCAATACATGGAATCTGATATAATTATTGACTT 2231

2247 GACTTTGATGAGTAGTCCTATGATGGGGGGAACTTTCACTTTGGCCTATG 2296
     *|||*||*|||||||||||||||||||*|||||*|||||**|*||*||*|
2232 AACTCTGCTGAGTAGTCCTATGATGGGAGGAACCTTCACAATAGCTTACG 2281

2297 TAGCGGGGAGCTACTTGAAGAGCATTAAGAATATGCAATTTTTAGATGCT 2346
     |*||*|||||*||*||||||||*||||||||||||||*||||||||||||
2282 TGGCAGGGAGTTATTTGAAGAGTATTAAGAATATGCAGTTTTTAGATGCT 2331

2347 CTTCCCCATATAACTTTCAATTTTGAGAAGGGAGGCAAAAGCACAAGGAG 2396
     ||*||*||||||||||||||||||||||||||||||||*||||||*|*||
2332 CTACCTCATATAACTTTCAATTTTGAGAAGGGAGGCAAGAGCACACGAAG 2381

2397 TTTGAGATTTCCAAGTAGATTGTTTCCTACATACCAAAGTTTGGATCGTT 2446
     *||*|*|||||||||*|**||||||||*||*|||||*|||||*|||||||
2382 CTTAAAATTTCCAAGCAAGTTGTTTCCCACTTACCAGAGTTTAGATCGTT 2431

2447 GGGACCTCAATGCTAGCAGAGAAGATGATGTCTCTGGACATTTTGTCCTT 2496
     ||||*||*|||||*||||**|||||||||||*|||||*||*|||||*||*
2432 GGGATCTTAATGCCAGCAAGGAAGATGATGTTTCTGGGCACTTTGTTCTC 2481

2497 TACCAAAGAGACACAGTGTCAAGTGCTCTAGAAGGGGACTTGGTTTTTCG 2546
     ||*||||||||||||||||||||||||||*||*||*|||||*||**|*||
2482 TATCAAAGAGACACAGTGTCAAGTGCTCTTGAGGGTGACTTAGTGCTCCG 2531

2547 TGTTTCAGCACGTGTCTCAGGAGAACCGATGATGCATGGTGTTAGTGTGG 2596
     |||*||||||||**|*||*|||||*||*|**|||||*||*||*||*||||
2532 TGTCTCAGCACGAATTTCTGGAGAGCCAACAATGCACGGCGTGAGCGTGG 2581

2597 GGTATCCGACGACATTAACAAGGGCCACTACTGGGAAAATGTCAAGTAGA 2646
     |||||||*||*||**|*||*||*||*||*||||||||*|||||*|||*||
2582 GGTATCCCACAACGCTGACGAGAGCTACCACTGGGAAGATGTCGAGTCGA 2631

2647 TCTCTAGGTGAGAAGGTTAGAAAACCCATTGGTCTTGCTAAGGGACAAGC 2696
     |||*||||*||*|||||*||*||*|||||*||*|||||*|||||||||||
2632 TCTTTAGGGGAAAAGGTGAGGAAGCCCATAGGCCTTGCAAAGGGACAAGC 2681

2697 TCACATGAATCTTGCAGATTACAAGAGGGTTTTTTACCCAATGGCTGAGT 2746
     |||*|||||*||*|||||*|||||*|||**|||*||*||**|*|||||||
2682 TCATATGAACCTAGCAGACTACAAAAGGACTTTCTATCCTGTAGCTGAGT 2731

2747 GGATATACTCTTCGGAGAAATATGAGGGAAGAAGAGAAGATAGAGACATC 2796
     |||*||||||*||*|||||*|||||*||*||*||*|||||||||||*||*
2732 GGACATACTCATCAGAGAAGTATGAAGGTAGGAGGGAAGATAGAGATATT 2781

2797 TTAAAGCTTTTGCTTAAGATGAGACTTGATGGCACTAAGGCTACAGAGGA 2846
     ||*|||||*||*||*||||||||||||||||||||*|||||*||||||*|
2782 TTGAAGCTCTTACTCAAGATGAGACTTGATGGCACCAAGGCCACAGAGAA 2831

2847 TTTCAGAATTGTGCATAGTCCTCTTGTCAGAGTGTTGCAAAACTGCGCTT 2896
     |||||||||*||*|||||*|||||*||*||||||||||||||*||*||||
2832 TTTCAGAATCGTACATAGCCCTCTGGTGAGAGTGTTGCAAAATTGTGCTT 2881

2897 GGTTGAGAGGAACGATCCATTTTAAGATTGTCGTAAGGGCAAATTCAGAA 2946
     ||||||*|||*||*||*||||||||**|*||*||*|**||||||||*|||
2882 GGTTGAAAGGCACAATTCATTTTAAAGTCGTTGTCAAAGCAAATTCTGAA 2931

2947 ATGATGTCTTATCAGAGGACTTCTCAAGTTCATGTTACTGCCCATGAGAA 2996
     |||||||||||*|||||*||||||||*|||||||||||||||||||||||
2932 ATGATGTCTTACCAGAGAACTTCTCAGGTTCATGTTACTGCCCATGAGAA 2981

2997 CAGCCTGAGTTCCAATGAATTCTTTTCAGGCATGCTGACGGCCACAAGTG 3046
     *||**||||||||||||||||*|*|||*||||||||*||*||||||||||
2982 TAGTTTGAGTTCCAATGAATTTTATTCGGGCATGCTAACAGCCACAAGTG 3031

3047 GTGAACTTGAATTTTCAAAAGAAGTCGTTGGCCCTGTTGAAGGTTTTTCA 3096
     |*||||||||*||*||*||||||||*||||||||*|||||*||*|||*|*
3032 GAGAACTTGATTTCTCCAAAGAAGTAGTTGGCCCAGTTGAGGGATTTGCT 3081

3097 TCCATGGGCTGGAATGTGCAAGGAAATAAAAAGTTCTACAAATTGTGCAT 3146
     ||*|||||*|||||||||||*||*||*||*||*|||||*|||*|||||||
3082 TCTATGGGTTGGAATGTGCAGGGCAACAAGAAATTCTATAAACTGTGCAT 3131

3147 AGCTCTTGGAAATGTCCATGAATATGAGGCAGTGAAAGTTATGGCAAGCT 3196
     |*|*||*||||||||*|||||||||||||||||*|||||*||||||||*|
3132 ATCACTCGGAAATGTACATGAATATGAGGCAGTTAAAGTCATGGCAAGTT 3181

3197 TTGGTGATGATGTAGAATTTGCAGGACAGCAGAAGGCTGGGCACTATGCG 3246
     ||||*||*|||||||||||||||||||||||*||*||*||||||||||||
3182 TTGGAGACGATGTAGAATTTGCAGGACAGCAAAAAGCCGGGCACTATGCG 3231

3247 CTAGAAAGAGGAGTGAGTGTCTTCAAGGAGTTCAAGTATTAGTTTGTTAT 3296
     ||*|||||||||||*||||||||*||||||||*||*|||||||*******
3232 CTTGAAAGAGGAGTTAGTGTCTTTAAGGAGTTTAAATATTAGTCCAGAGC 3281

3297 TTTATTTCTAATAAAGAAAGGCGTGAGCAGCCAGCCTCCCATTAAAATGG 3346
     ||*||*|**||||||||||||||||||||||*||||||||||||||||||
3282 TTGATCTTCAATAAAGAAAGGCGTGAGCAGCAAGCCTCCCATTAAAATGG 3331

3347 GTTCCACTGCTTTGTTAAATCTATTTTGTTTAGTGTGCTTGTTATAGAGT 3396
     ||||||||||||*|||||||*|||||*||||*|*||||||**|*|**|||
3332 GTTCCACTGCTTAGTTAAATTTATTTAGTTTGGAGTGCTTAATGTTAAGT 3381

3397 GCCGGGTTGAAACACCTTTTTCCTC-AGGAAAATAGTTTACATAATAGAG 3445
     *|||||||**||*|||*|||***||*|*|*|||||*||**|**||||*||
3382 ACCGGGTTCGAAAACCCTTTCTTTCTATGGAAATATTTCGCTAAATAAAG 3431

3446 G 3446
     |
3432 G 3432