NC_005996 AY163333 1 GTTAAATTCACCATGGCTTCCGAATTTGGCATTTTGATTTGTGATAAATT 50 |||*||||||*||||||*||*||*||||||||*||**|***|||*|||*| 1 GTTTAATTCATCATGGCGTCGGAGTTTGGCATATTACTAACTGAGAAAGT 50 51 GAAGGAAAATACTTTAGAAAAAACGAATTGTGACGTTATTATTACGGGAG 100 **|*|***||*|**|*|||||*|||||||||||*||*||*||*|||**|* 51 AGAAGGTGATGCACTGGAAAAGACGAATTGTGAAGTGATAATAACGAAAA 100 101 TGGGAAAAGTAGGTGTACACGAAGAGGACGGTGTGTTAGGATATGAGTGG 150 **||*|*|||********|*||*|**||*||*||***|||*||||||||| 101 ACGGGAGAGTGAAACATAAAGAGGTTGATGGAGTAAAAGGCTATGAGTGG 150 151 GAGGAGACTAACTATAGGTTAGGATTGTGCGAAATAGAGA-ATACGATGT 199 |||***||**||*|||||*|*||**|*||||||**||||**||**||||* 151 GAGTTTACAGACCATAGGCTGGGGCTCTGCGAAG-AGAGTTATCTGATGA 199 200 CAATCAGTGATTTTGTTTATAAGCAAATAAGATGTGAGGGAGCATACCCC 249 *|||****||*|*|||*||||*|||||*||*|||*||*||*||*||*||* 200 AAATGGCGGAGTATGTGTATACGCAAACAAAATGCGAAGGTGCGTATCCG 249 250 ATTTTGCCGCACTATGTTACAGACGTCATTAAATATGGCATGGTAATTCA 299 *|*||*|||||*|||*||||*||*||**|*||*||*||**|**|**||*| 250 GTGTTTCCGCATTATATTACTGATGTTTTGAAGTACGGTGTCATGGTTGA 299 300 TAGAAATGATCATCAGATCCGAGTTGACAGAGATGAAAAAAGTATTGGAA 349 |||*||||||||*||*||**||||*||*||*||*|**|||****|*|||| 300 TAGGAATGATCACCAAATAAGAGTGGATAGGGACGTGAAAGAATTAGGAA 349 350 AAATCCAGATTCAGCCGTATTTTGGCGATATGTATTTCTCCCCCGAGTAC 399 |*||***|||*||*|||||*|||||*||**|||**||*||*||*||||** 350 AGATTTTGATCCAACCGTACTTTGGAGAGGTGTTCTTTTCACCTGAGTTT 399 400 TACCCGGCAACTTTTATTAAACGTGAGTCTTTACCAATCTCAGTAGATAC 449 ||**|**|*||*|||*|*|||*|**|**|**|****|*****||*||*|* 400 TATACATCGACCTTTTTGAAAAGACAAGCGATTAATAGTGATGTTGAGAT 449 450 GATCAGAGGTTATATTGGAGCTAGAATGCGAGGGATTGAAGCTAGGGCTG 499 |*|*||**|*|**|||*******|*||***|****||||||*|**|***| 450 GTTGAGGAGATCGATTCCGAAACGGATAAAATACTTTGAAGATCAGATGG 499 500 GGCGAATTAGGGAGGGTGATGGAAACTTGTTAGAATGCGCGCGCAGATGG 549 *|**||**|*****|***|||||||*|*|*|*|********|*||*|||| 500 AGTTAAGGAAAAGCGTAAATGGAAATTGGATCGGTACGTTACACAAATGG 549 550 GAAAA-AGCG-------GCGTATG--AGAGGATTGAGAATGAAAAAGCGT 589 *||*|*||||*******|||||||**||||||**|||***||||*||*|| 550 AAAGAGAGCGTAGATGCGCGTATGTTAGAGGAGGGAGTGGGAAAGAGAGT 599 590 TGCGGTGCGTGGCACATGAAACAGATCCAACGTATCAAATTCTTAAAAAA 639 ****|||*||****||*|||||*||*******|||||**|**|*|||*|* 600 ----GTGTGTAAGCCACGAAACTGACGTGGTATATCAGCTAATGAAAGAG 645 640 CAAAGATTTGGATTTGTCTATCCGCATTATTATGTTTTGAATACTAATTA 689 ****|*|||||**|**|*||*||*|||||||||*|**|*||*|*|*|*|| 646 ATGCGGTTTGGTCTATTATACCCCCATTATTATATGCTAAACAATGAGTA 695 690 TAATCCAACAACGGTGACTAGAACTTCGCGGATTAATGATTGGTTGCTAA 739 |******|**|**|*||*|*******||***|||**|**|||||||*|*| 696 TGTAGTGAAGAAAGAGAATGTTGACGCGTTAATTGGTAGTTGGTTGATCA 745 740 AAGAAAAGACACAAGGAGTTGTGAAGACCGCTGAGGCGTTTTCCGACAAC 789 |*||*|***|****|||***|***||**|*|**||**||*|||*|***** 746 AGGAGAGATCGAGTGGAAAGGCAGAGTACTCCCAGATGTATTCAGGGGTA 795 790 GCAGAGTTGAAGACTTTAGCGGAACGAATGGAAGAGGAGGAGCTGACTGA 839 |*|**|*|*|*****|||***|||||*||*|||*||||*|||*||**||| 796 GGACCGCTTAGTGGGTTACGCGAACGTATTGAAAAGGATGAGTTGGATGA 845 840 GGATATTATTCGAGCAGTGATCAGGTATGGAGCCAAATACGCTACGCGCT 889 **|**||||||*||***|*||****|||||**|*||||*****||***** 846 AAAAGTTATTCAAGAGATTATTGCCTATGGCTCAAAATTTAGCACATATA 895 890 CGGGTAT---GCGAGAGGATACACTGTCACTCCAGGAGTTGGATCGTTAT 936 |*||||****|||*|**||||*|***||*||**|**|*||*|*|***||| 896 CAGGTACCAAGCGCGGTGATATA---TCGCTAAAAAACTTAGTTGAGTAT 942 937 TGCGATTCTCTAACAACTTTTGTTCATAAAAAGAAGAAGGATGAAGGTGA 986 ||*||***|*|*||*||*||*||*||*||*|||||*||*||||***|||| 943 TGTGAAAGTTTGACCACATTCGTACACAAGAAGAAAAAAGATG---GTGA 989 987 TGATGAAACAGCACGTACGATAATTAGAAATCAGTGGATTAAAGGGATGC 1036 *||*|||||*|||||***|*|**|||*|||**|||||||**|*||||||| 990 GGAGGAAACCGCACGACAGTTTTTTAAAAACAAGTGGATACAGGGGATGC 1039 1037 CTCGAATGGATTTCAAAAAAGAGATGAAAATCACTCGAGGTCCGATTGCG 1086 |****|||*||||**|||**||||||||**|***|||*||*||****||* 1040 CCAAGATGAATTTTGAAAGTGAGATGAAGGTGTTTCGCGGACCATGGGCT 1089 1087 AACTGGTCGTTTTTTATGTCTATAGATGCTTTCAAAAGGAATAATAAGGT 1136 |||******||*||***|***||*|||***||*|||||*||*|||**||| 1090 AACATTCAATTCTTCTGGAGCATTGATATGTTTAAAAGAAACAATGGGGT 1139 1137 TGATATTAATCCGAATCACCAGACGTGGAAGGATCACATTAAAGAAGTGA 1186 *|||||**|||||||***|*|*|**|||||**|**|*|*****|||||** 1140 GGATATAGATCCGAACGGCGAAAATTGGAAAAAATATAAGGCGGAAGTCC 1189 1187 CTGATCAAATGAATCGTGCGCAACAAGGCAACAATAATAAGCCTCTAAAG 1236 **||*|***|||||***|||||**|****||******|***||||***** 1190 AAGAACGTTTGAATGAAGCGCAGAAGAAGAATGGAGGTGTTCCTCATTTA 1239 1237 GTTCAAATCGATGGTGTTAGCATACTCACGAGTGAAAAATATGGTACCGT 1286 *|*|***|*|||||*||*|**||**|*||***|*|||||||*||*||||| 1240 ATGCTTGTTGATGGAGTGAATATTATGACAGATAAAAAATACGGGACCGT 1289 1287 TGGTCATTGGGTCGATTGGGTTGTTGATTTGATTATGTTGGCGCAGGTGA 1336 |****|||||||*||||||||*||**|||**||*|||||**||||*|||| 1290 TCAAAATTGGGTTGATTGGGTCGTGAATTATATCATGTTATCGCACGTGA 1339 1337 AAATGTTAATAAAAGAATATAAGTTTAAAAGATTAAATAGCCAAAATTTG 1386 ||***|||*|*||*||*|||||*|||||||*|*|**|*****|*|||||| 1340 AACGTTTAGTTAAGGATTATAAATTTAAAAAACTGCAACCGGATAATTTG 1389 1387 ATGTCGGGTATGAACAAACTGGTTGGTGCGCTGAGATGTTATGCTTACTG 1436 |||||*||*|||||*||*||*||*||||||*||||*|||||*||*||*|| 1390 ATGTCAGGCATGAATAAGCTTGTAGGTGCGTTGAGGTGTTACGCATATTG 1439 1437 CTTGATTCTTGCTTTATATGACTATTATGGTCAAGATATTGAGGGCTTCA 1486 |*|*||*|||||*||*|||||**|||**||****||*|||||*||*||*| 1440 CCTAATCCTTGCGTTGTATGATCATTTCGGAGCGGAAATTGAAGGATTTA 1489 1487 AGAAGGGATCAAATTCGTCTGCGATATTAGAAACGGTTATTCAGATGTTT 1536 *||||||**|*||**|**||*|||||*|*|||||*|||***||*|||||| 1490 GGAAGGGGACTAACGCAGCTTCGATAGTTGAAACAGTTTCCCAAATGTTT 1539 1537 CCGAATTTTAAACAGGAAATTCAAGCTAATTTCGGAATAAATTTGAATAT 1586 ||*|||||*|*|*||||**||***|**|*|||*||*||**||*|*||*|* 1540 CCAAATTTCAGAAAGGAGGTTTCGGAAACTTTTGGCATCGATCTCAAAAC 1589 1587 TAAAGACAAAAAAACAATCGCTATTCGTCGAGCGACG-ATGCATTCGGAC 1635 *|||||*|**||**||****||*|||***|**|*|***|||*||****|* 1590 AAAAGAGATTAAG-CACGAACTTTTCAAAGCTCAAAATATGAATGTTAAA 1638 1636 TTCTCATCGAATGAAGAGTACGGATATAAATTTGTATTTGGATGGGCGGC 1685 ****|******||*|||*||||||||*||*|||***|**||*|||*|*** 1639 GCGGCTGATGTTGGAGATTACGGATACAAGTTTCAGTACGGGTGGACTCG 1688 1686 AAGAGGTGAAGAAGTGTTGAGTAATTATGGAGATGTTCTCTCAGATGAGG 1735 ||*||**||**|*||**|||||*||||*|||||**|**|**|*||*||** 1689 AACAGCGGAGCAGGTAATGAGTGATTACGGAGAAATATTGACTGAAGAAA 1738 1736 TTGAAGAATTAT-TCACGAAACTTAGGAAGAAAGAGCATTGGGATAAGGT 1784 |||||***||||*|||***||*||**|*||**|*||*||*||||*||||| 1739 TTGAAACGTTATATCAATCAATTTTAGCAGGCAAAGAATGGGGA-AAGGT 1787 1785 TGTGGAAGATCCAGAATCTTATTTCATAGATGAGCTTTATCAAAAGAATC 1834 |***||*||**|*||***|||||||||*|||||**|*|*|******|**| 1788 TTCTGATGAAACGGATGTTTATTTCATCGATGATTTATTTTCCTCAACGC 1837 1835 CGGCGGAAGTGTTTTATAGCGCAGGCTATGATACAGATCAAAATGTGGTA 1884 |||***|*||*||*****|*|**||****|||*|**|**|*|||*|**** 1838 CGGACAAGGTATTCAGACGTGTTGGACTAGATTCTCAAAATAATATCAAG 1887 1885 ATCGATGGGAAAATGACAGAGGGAGTCACGTACTTCTCTAAAAGATTTGT 1934 ||*||*||*|||||||**|||******||*||||||||*|||*|*||||| 1888 ATTGAGGGTAAAATGAATGAGTTGACTACATACTTCTCAAAACGTTTTGT 1937 1935 TTCGTATTGGTATC---------GTGTTGAGAAAATAACAACGAAGCACC 1975 |*|**||||||||**********|*||*|||||*|*||*|***|**||** 1938 TACCCATTGGTATAAAATTACAAGGGTGGAGAAGA-AAGATTTACTCATT 1986 1976 TTGAGT--TTTTAAC--TGAAGAGAATCGAAAAGTCGCGCAGTTTGATTT 2021 *|||*|**|*|**||**||||*|*||*||*||**||**|||||||*||** 1987 GTGAATGATATCTACGATGAAAA-AACCGGAATATCA-GCAGTTTTATCC 2034 2022 TG-AGGATTATAAACCGA-TGGCTATTGGAGAGATGGGGATTCATGCGTC 2069 *|*|*||||**||*||*|*|||*|||||||||||||||**||||*||*|| 2035 CGGATGATTTCAAGCCAAATGGTTATTGGAGAGATGGGTGTTCACGCTTC 2084 2070 GACATATAAGTATGAGTCGTTGCTCCTTGGGAAAAATAGAGGGCAAAAAG 2119 *|||||||**|||*|****|||*|**|*||*|*||||||*||**|***** 2085 AACATATATATATCAAAACTTGATTTTAGGTAGAAATAGGGGTGAGCGGA 2134 2120 TGAATGATTCCATCGCTCT-GTGTAACTACGATCTTGCACTTACGAATTT 2168 |***||||**||**|***|*||||***||*|||*|**|**|*||*||||| 2135 TTGTTGATAGCAAAGAGATCGTGTGG-TATGATTTGTCGTTGACCAATTT 2183 2169 CGGGGTTTCGAGGCGTCAGGACTGTTGCTGGATCTCATCGTGTAGTGCCA 2218 ||***|***|*|****|||*|****||*|||||***|||***|******* 2184 CGACCTGGTGCGTTCGCAGAATCAATGTTGGATTGGATCAATTTCAAATT 2233 2219 TTGAGCTTTCGATGAGAGCCAACATCATTATCGCTATTTTTAGGAGA-AT 2267 |||||*|****|||*||****|||||||*|*||**|||||***|||**|| 2234 TTGAGTTAAGTATGCGATATCACATCATAACCGAAATTTTCCAGAGGTAT 2283 2268 CGAA--GACAAGAGATATGAGAATTTCG-CGAAAATATTATCCGGACTCA 2314 *||***||******|*||*||**||*|**|||||*|||*|*|*|||||*| 2284 AGAGTGGATTCAGCACATAAGTCTTACCACGAAATTATCAGC-GGACTGA 2332 2315 CACAGCAGCAAGACCTATATTTCCCTACGTATAAGCATTATTATCTGTTT 2364 |**||*|**|*|***|***||||||||**|||||*|||||||||*|**** 2333 CTAAGAAAGACGTGATTCTTTTCCCTAGTTATAAACATTATTATGTTCGA 2382 2365 GTGTTACAAAAGGTATTACGAGATGAGAGGAGGATAGATCTAAATAGAAT 2414 ||**|||||*|*|||||*|*||||**|***|*|*|||||*|***||||*| 2383 GTTATACAAGATGTATTTCAAGATTCGCAAAAGGTAGATGTTT-TAGATT 2431 2415 ATGCACCGAGTTGTTTGATACAC-AGAGGCGAAGAGGTATTCTCCTTTCG 2463 *******|||***|**||**|***|||*|||***|**||**||*||***| 2432 TCTGTTTGAGGATTGCGAACCCTGAGACGCGCTTATCTACGCTGCTGAAG 2481 2464 TTTACCGCGTTGAGATTTTGGAATGATTCAGAATTTTTGGGTGATGCGTT 2513 *||***|**||*|||***||****||*||*||*||**|********|**| 2482 ATTCAGGGTTTCAGAGCATGTGTGGAATCTGAGTTCCTTCTCCCAACACT 2531 2514 AATGATGAATTTTCTACATAGGGTGGTTTTCGAGATGGAAAACGTCGATG 2563 *****||||||||*|***|*||*||*|**|*||*||||||||||**||** 2532 TCACCTGAATTTTTTGATTTGGTTGCTGATTGACATGGAAAACGGGGACA 2581 2564 TGGATTATGGGAAGAAGTGGCATCCGCTACTAGTATCGTCAGAGAAGGGG 2613 |**||||***||||||**|||*|||**||*|**|*||**|***||||||* 2582 TAAATTACTCGAAGAAAAGGCTTCCTTTATTGATTTCTACGACGAAGGGT 2631 2614 CTTAGAGTGATCGCGGTTGATGTTTTTAACTCAATGATGGGAGTGTCGAC 2663 *|*||*|||||*|||||*||*|**||*||*****||||*|***||||*** 2632 TTGAGGGTGATGGCGGTCGACGCATTCAATAACTTGATTGCCATGTCTTA 2681 2664 AAGTGGCTGGCTTCCTTATGTTGAACGCATTTGTTCCGAGTCTGATATGC 2713 *||*||*|||||*||*|||*|*||**|*||*|||**|||**|**|***|| 2682 TAGCGGTTGGCTCCCGTATTTAGAGAGAATATGTCACGAAACAAAGCAGC 2731 2714 GCAGGCGATTGAATGCAGATGAACTAGAGTTAAAACGGTGGTTCTTTGAC 2763 |*|*|*||*|*|||||*||||||*||*|*|||||***||||||**|**|* 2732 GGACGAGACTCAATGCTGATGAATTAAAATTAAAGAAGTGGTTTCTGAAT 2781 2764 TACTATGCGACATTACCGCTCGAAAGGAGAGGAGAGCCTCGGTTGAGCTT 2813 |||**|*|||*||******|*|||||*||*|**|||||*||**||||*|| 2782 TACGTTACGAAATACGAAGTTGAAAGAAGGGCGGAGCCGCGTATGAGTTT 2831 2814 TAAGTATGAAGGATTGACCACGTGGATTGGCTCAAATTGTGGAGGGGTGC 2863 *||****||*||**|*||*|||||||||||*|||||*||*||*|||||*| 2832 CAAAATGGAGGGCATAACAACGTGGATTGGATCAAACTGCGGTGGGGTTC 2881 2864 GGGATTACGTTGTGCAATTGCTTCCTATGCGCAAATCAAAGCCAGGGCTT 2913 *|||||||*|**|*||*|||*|*||****||*|||*||||*||*||**|* 2882 AGGATTACATCTTACATTTGATACCATCCCGGAAACCAAAACCTGGATTA 2931 2914 CTCTGCATCGCTTACGGTGATGACGTCAATGTACAGTGGGTTGAAC--AT 2961 *|*|***|***|||****||*|**|***|||||*|*|||||***||**|| 2932 TTATTTTTGATTTATACGGACGCAGGGGATGTAGATTGGGTAACACGGAT 2981 2962 GAGTTAAGAGATTTTTTGATGCATGAGGGCTCACTCGGCTTAGTGGTAAT 3011 |**|||*||**|*|*|*|||****|||||*****|*|||||**|**|||| 2982 GCTTTACGATGTGTGTCGATTA--GAGGGTAGCTTGGGCTTCATTTTAAT 3029 3012 TAGCGGAAAGATGTTAGTTAATAAAAGTAAATTAAGGGTAAGGAACTTGA 3061 ***||******|**|*||*||*|||||**||||*||||*|*|||*|||*| 3030 CGACGATCGAGTTATGGTGAACAAAAGCCAATTGAGGGCACGGATCTTAA 3079 3062 AAATTTACAATCGCGGTACGCTTGATTCTTTATTCTTGATTTCGGGTGGC 3111 |*|||||*||**|*||*|***|*|||***||**|*||||||||*||*||* 3080 AGATTTATAACAGGGGAATATTAGATAAATTGATTTTGATTTCAGGGGGG 3129 3112 AACTATACATTTGGAAATAAGTTCCTATTATCGAAGCTGATGGCAAAAGC 3161 ||*||*||*||*||*||*||*|||*|**|*||*||*||**|*||*|||*| 3130 AATTACACTTTCGGGAACAAATTCTTGCTCTCAAAACTACTAGCCAAAAC 3179 3162 TGAATAGCGGAGTGACTTCCGCTCATGGTGATTCAACTTACC 3203 *||**||**|*||||||*|**||||||*|||*|**||||||* 3180 AGAGAAGTAGCGTGACTGCTACTCATGATGAATACACTTAC- 3220