NC_005996 AY163332 1 GTTAAATTCACCATGGCTTCCGAATTTGGCATTTTGATTTGTGATAAATT 50 |||*|*||||*||||||*||*||||||||*||**|**|****||*||**| 1 GTTTATTTCAGCATGGCGTCTGAATTTGGAATACTTTTCACCGAAAAGAT 50 51 GAAGGAAAATACTTTAGAAAAAACGAATTGTGACGTTATTATTACGGGAG 100 **|*||**|*||*||*||*||||||||||||||*||*|||||*||*|**| 51 CTATGACCAAACGTTGGAGAAAACGAATTGTGATGTGATTATCACTGAGG 100 101 TGGGAAAAGTAGGTGTACACGAAGAGGACGGTGTGTTAGGATATGAGTGG 150 *|*|*|||||***|******||*|*|||*||*|||***|||||||**||| 101 AGAGGAAAGTGAATCGGAGAGAGGTGGAAGGAGTGCGGGGATATGTATGG 150 151 GAGGAGACTAACTATAGGTTAGGATTGTGCGA-AATAGAGAATACGATGT 199 ||*||*||*|||*|**|*||*|||||*||*||*|||**|****||||*** 151 GAAGAAACAAACCACCGTTTTGGATTATGTGAGAATTCATTTGACGAAAA 200 200 CAATCAGTGATTTTGTTTATAAGCAAATAAGATGTGAGGGAGCATACCCC 249 *|||****||*****|*|||***|||||*|**|||||*||*||*|||||* 201 -AATATCGGAAACCATGTATTGCCAAATTAAGTGTGAAGGTGCTTACCCG 249 250 ATTTTGCCGCACTATGTTACAGACGTCATTAAATATGGCATGGTAATTCA 299 ||*||*||*||*|||*||***||*|***|*|**|||||*|*|*|*||**| 250 ATCTTTCCACATTATATTGTTGATGCGTTGAGGTATGGTAAGATGATCGA 299 300 TAGAAATGATCATCAGATCCGAGTTGACAGAGATGAAAAAAGTATTGGAA 349 ||||||||||*|*|||*|**|*|||||****|||||*||**|**|****| 300 TAGAAATGATAACCAGGTTAGGGTTGATCAGGATGACAAGCGATTGATGA 349 350 AAATCCAGATTCAGCCGTATTTTGGCGATATGTATTTCTCCCCCGAGTAC 399 ||||**|*||||||||||||*|*||*||*|||||||||||*||||||**| 350 AAATTAAAATTCAGCCGTATATGGGTGAAATGTATTTCTCACCCGAGAGC 399 400 TACCCGGCAACTTTTATTAAACGTGAGTCTTTACCAATCTCAGTAGATAC 449 ||**|**|***|||***|||**|**|**|****|**||*|||*|*||*** 400 TATTCTACCGTTTTCTGTAAGAGACAAGCAGAGCTCATGTCAATTGAA-- 447 450 GATCAGAGGT-TATATTGGAGCTAGAATGCGAGG--GATTGAAGCTAGGG 496 ||||**||||*|**|||*||**||**||||||****||***||**|*|** 448 GATCTAAGGTATCCATTTGATATAAGATGCGACTTCGAAGAAACTTCGTT 497 497 CTGGGCGAATTAGGGAGGGTGATGGAAACTTGTTAGAATGCGCGCGCAGA 546 |****||||*|*********|||||*||***|*|***||****|***|*| 498 CCAAACGAAATCCTCTTTA-GATGGTAAGAAGCTTAGATTATTGGAAAAA 546 547 TGGGAAAAAGCGGCGTATGAGAGGATTGAGAATGAAAAAG--CGTTGCG- 593 |||*||***||**||*|*||**|*||**|**|*|||||*|**|||*|*** 547 TGGAAACGGGCTTCGCAAGAACGCATGCACGAAGAAAACGACCGTGGAAA 596 594 GTGCGTGGCACATGAAACAGATCCAACGTATCAAATTCTTAAAAAACAAA 643 |||*|**|**||*||***||||*****|||||||*|**||||*|||**|| 597 GTGTGCTGGTCACGACGAAGATGTGTTGTATCAATTAGTTAAGAAATTAA 646 644 GATTTGGATTTGTCTATCCGCATTATTATGTTTTGAATACTAATTATAAT 693 |*|*|||**|**|*|||||*|||***|||****|*||*||*||*|||||* 647 GGTATGGCCTACTGTATCCACATAGCTATACCCTTAACACGAAATATAA- 695 694 CCAACAACGGTGACTAGAACTTCGCGGATTAATGATTGGTTGCTAAAAGA 743 **||*********|*||***|||*|*||||||*||*|||*||*|||||*| 696 --AATTGTCAACCCAAGCGTTTCACAGATTAAGGACTGGCTGTTAAAA-A 742 744 AAAGACACAAGGAGTTGTGAAGACCGCTGAGGCGTTTTCCGACAACGCAG 793 *|||**|***|*|*|*|*|||||*****||*****|*||*||*||*|||| 743 CAAGGGATG-GTATTAGAGAAGAATCTGGAA----TATCAGATAA-GCAG 786 794 AG----TTGAAGACTTTAGCGGAACGAATGGAAGAGGAGGAGCTGACTGA 839 *|****||***|***||*|*|*****|||**||||*||||||||*|*|** 787 GGACCATTAGCGGAGTTGGTGAGTGCAATCAAAGACGAGGAGCTAAGTCG 836 840 GGATATTATTCGAGCAGTGATCAGGTATGGAGCCAAATACGCTACGCGCT 889 ||***|*|||*|*****|**|****|||||**|**|||****|*||*|** 837 GGGAGTAATTGGGCGGATCGTACAATATGGCTCGCAATTTAGTTCGTGTG 886 890 CGGGTATGCGAGAGGATACACTGTCACTCCAGGAGTTGGATCGTTATTGC 939 |*||****|||||*|||****|**|**||*|****|||**||||||*||| 887 CAGGGGAACGAGAAGATGATATCCCGATCGAAACATTGATTCGTTACTGC 936 940 GATTCTCTAACAACTTTTGTTCATAAAAAGAAGAAGGATGAAGGTGATGA 989 ||*||*||*||*||*|||||||||**||||||||**||***|||*||||| 937 GACTCGCTGACGACATTTGTTCATCGAAAGAAGAGAGAACGAGGCGATGA 986 990 TGAAACAGCACGTACGATAATTAGAAATCAGTGGATTAAAGGGATGCCTC 1039 |***|||||*|||****|**|*||||||***|***||**|*|*||||||* 987 TACCACAGCGCGTGACGTCTTCAGAAATGCCTTAGTTGGAAGTATGCCTA 1036 1040 GAATGGATTTCAAAAAAGAGATGAAAATCACTCGAGGTCCGATTGCGAAC 1089 *||||||*|||||*||**|*|||||*||**|*|*|*|***|***|**||| 1037 AAATGGACTTCAAGAATCAAATGAAGATGGC-CAAAGAGGGTGGGGCAAC 1085 1090 TGGTC-GTTTTTTATGTCTATAGATGCTTTCAAAAGGAATAATAAGGTTG 1138 |***|*|||*|||***|**||*|||***||*|***|||*|*|*|||*|** 1086 TATACCGTTCTTTTCATACATTGATAGGTTTAGCCGGACTTACAAGATGA 1135 1139 ATATTAATCCGAATCACCAGACGTGGAAGGATCACATTAAAGAAGTGACT 1188 |||||*|*||||||*|*******|||||*||*||||***||*||||||** 1136 ATATTGACCCGAATAAGGGTTTATGGAACGAACACAAACAAAAAGTGAAG 1185 1189 GATCAAATGAATCGTGCGCAACAAGGCAACAATAATAAGCCTCTAAAGGT 1238 *|*|||*|**|****|***||||*|***|*|||******||**|****|| 1186 AAACAATTAGAA---GAAAAACAGGAAGAGAATGGGTCTCCCATGTCCGT 1232 1239 TCAAATCGATGGTGTTAGCATACTCACGAGTGAAAAATATGGTACCGTTG 1288 |||*||||||||*|||***||*|**||***||*****|||||*||*|||| 1233 TCAGATCGATGGGGTTTATATCCGAACAGATGTGCCGTATGGAACGGTTG 1282 1289 GTCATTGGGTCGATTGGGTTGTTGATTTGATTATGTTGGCGCAGGTGAAA 1338 *|||||||||*||||||||||||||****||*|||*|***|*||****|* 1283 ATCATTGGGTTGATTGGGTTGTTGACACAATCATGCTTAAGGAGACTGAC 1332 1339 ATGTTAATAAAAGAATATAAGTTTAAAAGATTAAATAGCCAAAATTTGAT 1388 |***|*|||||*||*||**|*|||||*|*||||||**|**||*|*||||| 1333 AAAATGATAAAGGATTACGAATTTAAGAAATTAAAACGTGAAGAATTGAT 1382 1389 GTCGGGTATGAACAAACTGGTTGGTGCGCTGAGATGTTATGCTTACTGCT 1438 **|*|||||||||||**|||**|*||***|||||||***||*|||*|||| 1383 AGCTGGTATGAACAAGTTGGAGGATGGTTTGAGATGCATTGTTTATTGCT 1432 1439 TGATTCTTGCTTTATATGACTATTATGGTCAAGATATTGAGGGCTTCAAG 1488 |||||*|*||*||||||||*||||||||****||*||||||||*|||||* 1433 TGATTTTAGCGTTATATGATTATTATGGGGCTGAGATTGAGGGATTCAAA 1482 1489 AAGGGATCAAATTCGTCTGCGATATTAGAAACGGTTATTCAGATGTTTCC 1538 |||||**||||**|*||**|*|||*|*||*||*||****||*|||||*|| 1483 AAGGGGACAAACGCTTCATCTATAGTTGAGACTGTATCACAAATGTTCCC 1532 1539 GAATTTTAAACAGGAAATTCAAGCTAATTTCGGAATAAATTTGAATATTA 1588 *||*||*******||*||****|**||*||*||*|||*|**||||**|*| 1533 AAACTTCCGTGGAGATATCATCGACAAATTTGGCATACAGCTGAAGGTGA 1582 1589 AAGACAAAAAAACAATCGCTATTCGT--CGAGCGACGATGCATTCGGACT 1636 ||*|***||****|***|*|*|||*|**|||**||****|*||******| 1583 AA-AGGGAAGCTGAGGAGTTGTTCCTTCCGAAGGATATGGTATCATCTTT 1631 1637 TCTCATCGAATGAAGAGTACGGATATAAATTTGTATTTGGATGGGCGGCA 1686 |||*|**|*|||**||**|*||||||||||*|**||**||*|||***|** 1632 TCT-AGAGGATGGCGAAGAGGGATATAAATATCAATACGGTTGGAAAGAT 1680 1687 AGAGGTGAAGAAGTGTTGAGTAATTATGGAGATGTTCTCTCAGATGAGGT 1736 |**|**|||**||||***||**|||||||*||**||*|**|**|****|| 1681 AATGAAGAATTAGTGGCAAGCGATTATGGTGAAATTTTGACTCAGTCAGT 1730 1737 TGAAGAATTATTCACGAAACTTAGGAAGAAAGAGCATTGGGATAAGGTTG 1786 **||****|*|||*****|*|*|*||*****|||*|*|||**|**|*||* 1731 ACAAATTCTGTTCGAAGGATTGATGAGAGGGGAGAAGTGGACTTCGATTA 1780 1787 TGGAAGATCCAGAATCTTATTTCATAGATGAGCTTTAT-CAAAAGAATCC 1835 |*||*|||||**|*||*||*||****|||||**|*|*|*|***|*||*|* 1781 TAGATGATCCTCAGTCCTACTTTGAGGATGATATATTTGCGGGAAAAGCT 1830 1836 GGC-GGAAGTGTTTTATAG-CGCAGGCTATGATA-----CAGATCAAAAT 1878 ****|||*||*|||*|*||*||*||*****|*|******||**|*|||*| 1831 AATAGGATGTTTTTGAGAGGCGGAGAGACGGTTGAACGGCATGTGAAATT 1880 1879 GT-GGTAATCGATGGGAAAATGACAG---AGGGAGTCACGTACTTCTCTA 1924 |**|||*|*||*|**||*|**||**|***||||**||||*|||||*||*| 1881 GAAGGTTAACGCTCAGACAGAGAACGTTGAGGGCATCACATACTTTTCAA 1930 1925 AAAGATTTGTTTCGTATTGGTATCGTGTTGAGAAAATAAC-------AAC 1967 ||||||||||*||*|||||||***|**||||****|*|||*******||* 1931 AAAGATTTGTATCTTATTGGTTCAGAATTGAACGCACAACGCACGTAAAG 1980 1968 GAAGCACCTTGAGTTTTTAA-CTGAAGAGAATCGAAAAGTCGC-GCAGTT 2015 |*||******||||***||**|*|*|**|||****|**||**|*|||||| 1981 GGAGGGGGAAGAGTAGATATTCGGGATCGAAAAACAGGGTACCAGCAGTT 2030 2016 TGATTTTGAGGATTATAAACCGATGGCTATTGGAGAGATGGGGATTCATG 2065 *|||*|*||*||||*||||||******|*|*||*||**|*||**||||*| 2031 CGATGTAGAAGATTTTAAACCTGCAAGTGTAGGGGAACTTGGATTTCACG 2080 2066 CGTCGACATATAAGTATGAGTCGTTGCTCCTTGGGAAAAATAGAGGGCAA 2115 ||||*|||||||**|||*|****||*||**|*||***|||||||||**|* 2081 CGTCAACATATATTTATCAAGATTTACTTGTGGGAGCAAATAGAGGCGAG 2130 2116 AAAGTGAATGATTCCATCGCTCT-GTGTAACTACGATCTTGCACTTACGA 2164 ***|||||*||**|*|**|***|*||||***|**|||*|**|*|||||*| 2131 CGTGTGAAGGACGCGAAAGAGTTAGTGTGGATG-GATTTATCTCTTACCA 2179 2165 ATTTCGGGGTTTCGAGGCGTCAGGACTGTTGCTGGATCTCATCGTGTAGT 2214 ||||||||*||**|*|**|**|**|**|*||*|||||**|**|*|*|*** 2180 ATTTCGGGTTTGTGCGAAGCTACAATAGATGTTGGATTGCGGCCTTTGTG 2229 2215 GCCATTGAGCTTTCGATGAGAGCCAACATCATTATCGCTATTTTTAGGAG 2264 |*****|||*|||||*|*|||****|**||||*|***|*||*|||*|*|| 2230 GAGGCGGAGATTTCGCTCAGATTTTATCTCATAACGTCGATCTTTTGTAG 2279 2265 AATCGAAGACAAGAGATATGA-GAATTTCGCGAAAATATTATCCGGACTC 2313 |*|*****||**|*||||*||*||*||||||*||*|||*||***|||*|| 2280 A-TATTTTACTGGCGATAGGAAGAGTTTCGCTAAGATACTAGATGGAGTC 2328 2314 A---CACAGCAGCAAGACCTATATTTCCCTACGTATAAGCATTATTATCT 2360 |***||**|*|**||****|||**||||||||*||*||*|||||*|||*| 2329 AAGTCATTGAAAGAAAGATTATGGTTCCCTACCTACAAACATTACTATGT 2378 2361 GTTTGTGTTACAAAAGGTATTACGAGATGAGAGGAGGATAGATCTAAATA 2410 ****||**|*||*|||*|*|****||||||*||||***|||||***|||* 2379 TGCCGTCATTCAGAAGATTTACTCAGATGATAGGAATCTAGATAGGAATG 2428 2411 GAATATGCACCGAGTTGTTTGATACACAGAGGCGAAGAGGTATTCTCCTT 2460 *|*|*||*|******|**|**|||****||***||*|*****|*|||**| 2429 AATTTTGTAATAGAGTCATGAATATCATGACAAGACGGTCAGTACTCAAT 2478 2461 TCGTTTACCGCGTTGAGATTTTGGAATGATTCAGAATTTTTGGGTGATGC 2510 **||||*****|||*|||******|*|||*||***|****||**|||**| 2479 GAGTTTGAGAGGTTTAGAAGAGCTATTGAGTCGCCAAAGCTGATTGACAC 2528 2511 GTTAATGATGAATTTTCTACATAGGGTGGTTTTCGAGATGGAAAACGTCG 2560 *||***|*|*||||||||*|*|*||*|**|||||||****||*|||*|*| 2529 TTTGTCGCTTAATTTTCTCCTTTGGATAATTTTCGAACAAGAGAACATAG 2578 2561 ATGTGGATTATGGGAAGAAGTGGCATCCGCTACTAGTATCGTCAGAGAAG 2610 ||||**|||*||*|*|*|||*|||||||*|||*||*||||**|****||* 2579 ATGTTAATTTTGCGGATAAGAGGCATCCACTATTAATATCAACGACTAAA 2628 2611 GGGCTTAGAGTGATCGCGGTTGATGTTTTTAACTCAATGATGGGAGTGTC 2660 ||**|*|||||*|||*||*||||*|||||*||********|*|***|*|| 2629 GGTTTGAGAGTAATCCCGATTGACGTTTTCAATAGTTCACTAGCTCTTTC 2678 2661 GACAAGTGGCTGGCTTCCTTATGTTGAACGCATTTGTTCCGAGTCTGATA 2710 **|||||||*|||*|*|||||*|||||**|*||*|||*|*|||*||*|** 2679 TCCAAGTGGTTGGATCCCTTACGTTGAGAGGATATGTGCAGAGGCTAAGG 2728 2711 TGCGCAGGCGATTGAATGCAGATGAACT-AGAGTTAAAACGGTGGTTCTT 2759 ****|*|*****|||*|*|*||||||*|*|||*|||||||**||||||*| 2729 AAAACCGTACGCTGAGTTCCGATGAATTGAGAATTAAAACC-TGGTTCGT 2777 2760 TGACTACTATGCGACATTACCGCTCGAAAGGAGAGGAGAGCCTCGGTTGA 2809 *||*||||||***|***||****|*||*|||||*|**||||||*||*||| 2778 AGAGTACTATCTAAATATAAACTTAGAGAGGAGGGCGGAGCCTAGGATGA 2827 2810 GCTTTAAGTATGAAGGATTGACCACGTGGATTGGCTCAAATTGTGGAGGG 2859 |*||*|||**|||||***|||*|||||||||*||*||*||||||||*||* 2828 GTTTCAAGAGTGAAGCGCTGATCACGTGGATCGGATCGAATTGTGGTGGA 2877 2860 GTGCGGGATTACGTTGTGCAATTGCTTCCTATGCGCAAATCAAAGCCAGG 2909 |||***|||||*||*||*||**|**|*|||*|*||*|||*|*||*||*|| 2878 GTGACTGATTATGTGGTTCAGCTTTTGCCTGTTCGGAAACCGAAACCGGG 2927 2910 GCTTCTCTGCATCGCTTACGGTGATGACGTCAATGTACAGTGGGTTGAAC 2959 *||*||*****|*|*|||****||*||||**|*||***|*||||**|||* 2928 CCTGCTAGTGGTTGTTTATTCGGAGGACGGGAGTGGGAAATGGGCAGAAT 2977 2960 ATGAGTTAAGAGATTTTTTGATGCATGAGGGCTCACTCGGCTTAGTGGTA 3009 **|*|*||*|*||||||||******|||*||*****|*||*|||*|**|* 2978 GGGCGCTACGCGATTTTTTAGACGTTGAAGGTAGCTTAGGATTAATTTTC 3027 3010 ATTAG-CGGAAAGATGTTAGTTAATAAAAGTAAATTAAGGGTAAGGAACT 3058 ||*|**||*|||**|||*|***|||***||***|||**|*||**|**|*| 3028 ATAACACGTAAAACTGTCAAG-AATGGGAGCGCATTGGGAGTCCGAGATT 3076 3059 TGAAAATTTACAATCGCGGTACGCTTGATTCTTTATTCTTGATTTCGGGT 3108 |*|||||*||||||||*||*|***|*|||***|||*|*||*||||||*|* 3077 TAAAAATCTACAATCGAGGGAGAGTAGATAGATTAGTTTTAATTTCGAGC 3126 3109 GGCAACTATACATTTGGAAATAAGTTCCTATTATCGAAGCTGATGGCAAA 3158 |||***|||||*|||||*||*||*||**||||*|||||*||**|**|*|| 3127 GGCGTTTATACTTTTGGGAACAAATTTTTATTCTCGAAACTACTATCCAA 3176 3159 AGCTGAATAGCGGAGTGACTTCCGCTC-ATGGTGATTCAACTTACC 3203 |***||*||*|||*||||||*|||*||*|||*|||*|**||*|||* 3177 AATAGAGTAACGGCGTGACTGCCGTTCTATGCTGAATACACATAC- 3221