NC_005996 AY163331 1 GTTAAATTCACCATGGCTTCCGAATTTGGCATTTTGATTTGTGATAAA-T 49 |||*|*||||*|||||||||*||*||||||*||*||*|****||||||*| 1 GTTTATTTCATCATGGCTTCAGAGTTTGGCGTTCTGTTGACCGATAAAGT 50 50 TGAAGGAAAATACTTTAGAAAAAACGAATTGTGACGTTATTATTACGGGA 99 ||||||**|*|*|||||||*||||||||||||||*||*|||*||||**|| 51 TGAAGGCGA-TGCTTTAGAGAAAACGAATTGTGAAGTAATTCTTACACGA 99 100 GTGGGAAAAGTAGGTGTACACGAAGAGGACGGTGTGTTAGGATATGAGTG 149 ***||****|||*|*******||*|**|||||*||***|||||||||*|| 100 AGTGGTCGCGTACGGCGGAGGGAGGTTGACGGAGTTAAAGGATATGAATG 149 150 GGAGGAGACTAACTATAGGTTAGGATTGTGCGAAATAGAGAATACGATGT 199 |||****||**|**||*|*||||||||*||*|||||||||*||||*|||| 150 GGAATTTACAGATCATCGATTAGGATTATGTGAAATAGAGCATACAATGT 199 200 CAATCAGTGATTTTGTTTATAAGCAAATAAGATGTGAGGGAGCATACCCC 249 |*||****|||||**|||||||*|||||*|**||*|||||*|||||*||* 200 CTATGGCGGATTTCTTTTATAATCAAATTAAGTGCGAGGGTGCATATCCG 249 250 ATTTTGCCGCACTATGTTACAGACGTCATTAAATATGGCATGGTAATTCA 299 ||*||*||*||*|||*||||*|||||**|*||||||||*|***|**||*| 250 ATATTTCCACATTATATTACCGACGTGCTAAAATATGGGAAAATGGTTGA 299 300 TAGAAATGATCATCAGATCCGAGTTGACAGAGATGAAAAAAGTATTGGAA 349 ||||||||||||*||**|**|||||||*||*||||**|||****|**|*| 300 TAGAAATGATCACCAAGTTAGAGTTGATAGGGATGTTAAAGAGCTAAGCA 349 350 AAATCCAGATTCAGCCGTATTTTGGCGATATGTATTTCTCCCCCGAGTAC 399 ||||***|||*||*||*||*||*||*||***|||*||*||*||*||*|** 350 AAATATTGATACAACCATACTTCGGTGAGGCGTACTTTTCACCAGAATTT 399 400 TACCCGGCAACTTTTATTAAACGTGAGTCTTTACCAATCTCAGTAGATAC 449 |||*|**||||||||*|*||**|**||*|**|*|*|||****||*||*|* 400 TACACCTCAACTTTTTTGAAGAGACAGGCGATTCAAATGAATGTTGAGAT 449 450 GATCAGAGGTTATATTGGAGCTAGAATGCGAGGGATTGAAGC-----TAG 494 |*|*||||**|*|*|***|***||**||********|||||******|** 450 GCTGAGAGCGTTTGTACCAAAAAGGGTGGCTTTTTATGAAGACGATATGA 499 495 GGCTGGGCGA-ATTAGGGAGGGTGATGGAAACTTGTTAGAATGCGCGCGC 543 ||**|||||**|*||***|*||**||*|*|**|||******|*|**|||* 500 GGAGGGGCGGTACTATTAACGGGAATTGGA--TTGGAGCGTTACAGGCGT 547 544 AGATGGGAAAAAGCGGCGTATGAGAGGATT-GAGAATGAAAAAGCGTTGC 592 *||*||*|||||||||**|***|*|*|****|*||**|*||*||*****| 548 GGAAGG-AAAAAGCGGATTTGCAAATGTCGCGCGAGGGGAATAGTCAAAC 596 593 GG--TGCGTGGCACATGAAACAGATCCAACGTATCAAATTCTTAAAAAAC 640 ****|||||*|**|||*|**|*|||**||**||||||****|*||*||** 597 TAATTGCGTTGACCATAATGCGGATGTAATATATCAACACATGAAGAAGT 646 641 AAAGATTTGGATTTGTCTATCCGCATTATTATGTTTTGAATACTAATTAT 690 *||||||||||||**|*|||||||||||*|||*|**|*|||*|**|*||| 647 TAAGATTTGGATTACTGTATCCGCATTACTATATGCTCAATCCAGAATAT 696 691 AA--TCCAACAACGGTGACTAGAACTTCGCGGATTAATGATTGGTTGCTA 738 |***|**||*||**|*|***||*|**|****|||*****|*|||||**|* 697 ACGGTTGAAGAAAAGAGCAAAGGAGGTTT--GATAGCCAACTGGTTAGTG 744 739 AAAGAAAAGACACAAGGAGTTGTGAAGACCGCTGAGGCGTTTTCCGACAA 788 |||||*|||*|****|||**||***|||***|******||*|||*|**** 745 AAAGAGAAGGCGGCGGGACGTGCTGAGAATTCACCAATGTATTCGGGGGT 794 789 CGCAGAGTTGAAGACTTTAGCGGAACGAATGGAAGAGGAGGAGCTGACTG 838 ||*|**|*|*||*||*|*****||*||*||*||***|||*|||*|***|| 795 CGGACCGCTAAATACATCGCGTGAGCGTATCGAGAGGGATGAGTTAGATG 844 839 AGGATATTATTCGAGCAGTGATCAGGTATGGAGCCAAATACGCTACGCGC 888 |**|**||||||**|*|*|*||****||||||*||||||*****||***| 845 AAAAAGTTATTCAGGAAATCATTGCTTATGGATCCAAATTTAGCACCTAC 894 889 TCGGGTATGCG-AGAGGATACACTGTCACTCCAGGAGTTGGATCGTTATT 937 *||||||**||*|*||||*|**||**|**|**|*||*||*|*****|||| 895 GCGGGTACACGCACAGGAGAT-CTCACTTTGAATGAATTAGTAAAGTATT 943 938 GCGATTCTCTAACAACTTTTGTTCATAAAAAGAAGAAGGATGAAGGTGAT 987 ||||***|*||||*||||||||||||||*||*||||||||*|*||***|* 944 GCGAAAGTTTAACGACTTTTGTTCATAAGAAAAAGAAGGAGGGAG---AG 990 988 GATGAAACAGCACGTACGATAATTAGAAATCAGTGGATTAAAGGGATGCC 1037 |||||*||*|||*|***|*|**|*|*||*|*|*|||||**||||*||||| 991 GATGAGACTGCAAGGGAGTTTTTCAAAAGTAAATGGATACAAGGTATGCC 1040 1038 TCGAATGGATTTCAAAAAAGAGATGAAAATCACTCGAGGTCCGATTGCGA 1087 ****|||*|*||**||||*||*||||**||**|**||****|****|||| 1041 AAAGATGAACTTTGAAAATGAAATGATTATGTCAAGAAAGTCATGGGCGA 1090 1088 ACTGGTCGTTTTTTATGTCTATAGATGCTTTCAAAAGGAATAATAAGGTT 1137 |*******||*|||**|**|||*|||***|||||*||*||||||***||| 1091 ATACAAAATTCTTTTGGAGTATTGATATGTTCAAGAGAAATAATGGCGTT 1140 1138 GATATTAATCCGAATCACCAGACGTGGAAGGATCACATTAAAGAAGTGAC 1187 ||||||*||||*||*****|||**|||||*|||*|||**|||*|*||*** 1141 GATATTGATCCAAACGGTAAGAATTGGAAAGATTACAAGAAAAAGGTACA 1190 1188 TGATCAAATGAATCGTGCGCAACAAGGCAACAATAATAAGCCTCTAAAGG 1237 *||*||**||*||***||||||*|****||||||||**|*||****||*| 1191 AGAGCAGTTGGATGAGGCGCAAAAGAAGAACAATAACGAACCGTATAAAG 1240 1238 TTCAAATCGATGGTGTTAGCATACTCACGAGTGAAAAATATGGTACCGTT 1287 |*****|*|||||*||||*|||**|*||||*|*|*||*||*||**||||| 1241 TAATGGTTGATGGGGTTAACATCATGACGAATAAGAAGTACGGATCCGTT 1290 1288 GGTCATTGGGTCGATTGGGTTGTTGATTTGATTATGTTGGCGCAGGTGAA 1337 |***|*|||||||||||||||||**|||**||||||||**||||*||*|| 1291 GAAAACTGGGTCGATTGGGTTGTAAATTATATTATGTTATCGCACGTCAA 1340 1338 AATGTTAATAAAAGAATATAAGTTTAAAAGATTAAATAGCCAAAATTTGA 1387 ||*|*|**|*||*||*|||||*|||||*||**|*||*****|*||||||| 1341 AAGGCTGGTTAAGGACTATAAATTTAAGAGGCTCAAGCCGGATAATTTGA 1390 1388 TGTCGGGTATGAACAAACTGGTTGGTGCGCTGAGATGTTATGCTTACTGC 1437 ||||*||*|||||*||*||*||*||*||*||*|||||||||||*||*||* 1391 TGTCCGGGATGAATAAGCTAGTCGGCGCACTAAGATGTTATGCGTATTGT 1440 1438 TTGATTCTTGCTTTATATGACTATTATGGTCAAGATATTGAGGGCTTCAA 1487 |||||*||*||*||||||||*||||**||**|*|||||*||*||*||*|| 1441 TTGATACTCGCGTTATATGATTATTTCGGGGAGGATATCGAAGGGTTTAA 1490 1488 GAAGGGATCAAATTCGTCTGCGATATTAGAAACGGTTATTCAGATGTTTC 1537 |||*|||*|*||**||*||*|*||**|||||||*||****||*|||||*| 1491 GAAAGGAACGAACGCGGCTTCAATTGTAGAAACAGTGTCCCAAATGTTCC 1540 1538 CGAATTTTAAACAGGAAATTCAAGCTAATTTCGGAATAAATTTGAATATT 1587 ||*|*||||***|*|||*||**||**|**||*|||||*|*|*||||||** 1541 CGCAGTTTAGGAAAGAAGTTTCAGAGACCTTTGGAATCACTCTGAATACA 1590 1588 AAAGACA--AAAAAACAATCGCTATTCGTCGAGCGACGATGCATTCGGAC 1635 ||||||***|||*|**|*|*|*|**|||*|*||*|||*|||**|*||*|* 1591 AAAGACGTCAAATATGAGTTGTTTATCG-CTAGAGAC-ATGAGTGCGAAA 1638 1636 TTCTCATCGAATGAAGAGTACGGATATAAATTTGTATTTGGATGGGCGGC 1685 ****|***|***|**|||***||*||*|||||****|*|||*|||***** 1639 GAGGCTCAGTTCGGTGAGGTTGGGTACAAATTCCAGTATGGGTGGAGAAA 1688 1686 AAGAGGTGAAGAAGTGTTGAGTAATTATGGAGATGTTCTCTCAGATGAGG 1735 ||**|*|*||*||||**||||**||||*|**||**||*|****||**||| 1689 AACGGATCAAAAAGTCATGAGCGATTACGCTGACATTTTGAGCGAAAAGG 1738 1736 TTGAAGAATTAT-TCACGAA--ACTTA--GGAAGAAAGAGCATTGGGATA 1780 ||||||*|||||*|||*|*|**||||***|||||*|||*|*|**|*|||| 1739 TTGAAGCATTATATCAAGCACTACTTTCTGGAAGGAAGTGGA--GCGATA 1786 1781 AGGTTGTGGAAGATCCAGAATCTTATTTCATAGATGAGCTTTATCAAAAG 1830 **|*||***|*|||*|*|||***|||||*||||||||**|*||****||* 1787 TAGCTG---ATGATACGGAAGAGTATTTTATAGATGATTTGTACGTTAAT 1833 1831 AATCCGGCGGAAGTGTTTTATAGCGCAGGCTATGATACAGATCAAAATGT 1880 ||*||*|*****||*|||*|*||*||*||*|**|||*|*||***|*|**| 1834 AAGCCAGATAGGGTCTTTGAGAGAGCTGGGTTAGATCCGGAGAGACACAT 1883 1881 GGTAATCGATGGGAAAATGACAGAGGGAGTCACGTACTTCTCTAAAAGAT 1930 *****|**|*||****||||**|||******|||||||||||*|||*|*| 1884 CAAGGTTAAAGGTGTGATGAATGAGCTGACGACGTACTTCTCAAAACGTT 1933 1931 TTGTTTCGTATTGGTATCGTGTTGAGAAAATAACAACGAAGCACCTTGAG 1980 |**||||*|||||||||****|****||**|***|*|*|*|*|*||***| 1934 TCATTTCTTATTGGTATAAAATAACTAAGGTTGAAGCAAGGAATCTATTG 1983 1981 TTTTTAACTGAA------GAGAATCGAAAA--GTCG-CGCAGTTTGATTT 2021 **|||||||||*******|*|*||**||||**||***|*|||||||||** 1984 ACTTTAACTGATATAGGGGGGGATGCAAAAAAGTATACACAGTTTGATCC 2033 2022 TGAGGATTATAAACCGATGGCTATTGGAGAGATGGGGATTCATGCGTCGA 2071 |||*||||*||||||*||||||*|*|**|||*||||****||*||||||| 2034 TGATGATTTTAAACCAATGGCTGTGGCTGAGCTGGGAGCACACGCGTCGA 2083 2072 CATATAAGTATGAGTCGTTGCTCCTTGGGAAAAATAGAGGGCAAAAAGTG 2121 |*|||***|||*||***|||*|**|*||||**||*|||||**|*|||*|* 2084 CGTATGTTTATCAGAATTTGATTTTAGGGAGGAACAGAGGCGAGAAAATT 2133 2122 AATGATTCCATCGCTCTGTGTAACTACGATCTTGCACTTACGAATTTCGG 2171 **||||*|*|**|***|***|***||*|||*|**|**|*||*|||||*|| 2134 GGTGATGCGAAGGAGATCGTTTGGTATGATTTATCTTTGACTAATTTTGG 2183 2172 GGTTTCGAGG-CGTCAGGACTGTTGCTGGATCTCATCGTGTAGTGCCATT 2220 ***|||*||**|||*||*|*|*|||*|||*|****||***|**|*****| 2184 ATGTTCTAGATCGTTAG-ATTCTTGTTGGGTGGGGTCAGTTGCTAGATCT 2232 2221 GAGCTTTCGATGAGAGCCAACATCATTATCGCTATTTTTAGGAGAATCGA 2270 |||||*****||*|***|*||*|*||***|||*||*|||*|*|**||*** 2233 GAGCTGAATTTGCGGTTCCACCTTATATCCGCAATATTT-GAACGATATC 2281 2271 AGACAAGAGATATGA-GAA-----TTTCGCGAAAATATTATCCGGACTCA 2314 ||*||*||***|*||*|*|*****|||***||||*|||**||*|**||** 2282 AG-CATGATGCACGACGGAGCTCCTTTTATGAAATTATCTTC-GATCTGC 2329 2315 CACAGCAGCAAGACCTATATTTCCCTACGTATAAGCATTATTATCTGTTT 2364 |*****||*||||*******|||||*|**||*||*||||||||**|***| 2330 CCTCTAAGAAAGAGAGGATCTTCCCGAGTTACAAACATTATTACGTCGCT 2379 2365 GTGTTACAAAAGGTATTACGAGATGAGAGGAGGATAGATCTAAATAGAAT 2414 *||*||||*||**|*||****|||*******|**||||**|||*|*||*| 2380 TTGCTACAGAATATCTTTAATGATACTCAACGATTAGAGGTAA-TGGACT 2428 2415 ATGCACCGAGTTGTTTGATACACAGAGGCGAAGAGGTATTC--TCCTTTC 2462 ||*****|||*****|||**|*|*||**|||*||*||***|**||||*|| 2429 ATTGCGAGAGACTGATGAATC-CGGAAACGAGGATGTCAGCCCTCCTATC 2477 2463 GTTTACCGCGTTGAGATTTTGGAATGATTCAGAATTTTTGGGTGATGCGT 2512 **||***|*|||*|||***||****||*||*||*||**|||******||| 2478 ACTTCAGGGGTTCAGAAACTGTGTCGAGTCGGAGTTCGTGGCCCCAACGT 2527 2513 TAATGATGAATTTTCTACATAGGGTGGTTTTCGAGATGGAAAACGTCGAT 2562 |*|*|||||||***||*|*|*||||**|****||*|||||*||**|*||| 2528 TGAAGATGAATGCACTTCTTTGGGTTTTAGCGGATATGGAGAATATTGAT 2577 2563 GTGGATTATGGGAAGAAGTGGCATCCGCTACTAGTATCGTCAGAGAAGGG 2612 *|**|*||***|||*|||*||***|||||**|**||||**|*|||||||| 2578 ATAAACTACTCGAACAAGCGGATGCCGCTGTTGTTATCAACTGAGAAGGG 2627 2613 GCTTAGAGTGATCGCGGTTGATGTTTTTAACTCAATGATGGGAGTGTCGA 2662 *||**|*|||||**|**|||||*|*||||||**||||*||||*||*||** 2628 CCTACGTGTGATTTCTATTGATATGTTTAACGGAATGCTGGGTGTTTCTT 2677 2663 CAAGTGGCTGGCTTCCTTATGTTGAACGCATTTGTTCCGAGTCTGATATG 2712 **||*||||||*|*||*||**|*||**|*||*||****||*****||*|* 2678 ATAGCGGCTGGATCCCATACTTAGAGAGGATCTGCAGTGAAGTAAATCTA 2727 2713 CGCAGGCGATTGAATGCAGATGAACTAGAGTTAAAACGGTGGTTCTTTGA 2762 |**||*||*||*|**||*|||||*|||*|*||*|****||||||**|*** 2728 CAGAGACGCTTAAGAGCGGATGAGCTAAAATTGAGGAAGTGGTTTATCAG 2777 2763 CTACTATGCGACATTACCGCTCGAAAGGAGAGGAGAGCCTCGGTTGAGCT 2812 ||||||*||*||*|******|*||*||**|*|**|||||**|**||||*| 2778 CTACTACGCTACCTATGAAGTTGAGAGACGTGCTGAGCCAAGAATGAGTT 2827 2813 TTAAGTATGAAGGATTGACCACGTGGATTGGCTCAAATTGTGGAGGGGTG 2862 ||||****||*|||*|**||||*||||||||*|||||*|||||*||*||* 2828 TTAAAATGGAGGGAATCTCCACCTGGATTGGTTCAAACTGTGGGGGCGTC 2877 2863 CGGGATTACGTTGTGCAATTGCTTCCTATGCGCAAATCAAAGCCAGGGCT 2912 |**||||||||**|*||*|||*|||||***||*|||*|||||||*||*|| 2878 CAAGATTACGTGTTACATTTGATTCCTTCACGAAAACCAAAGCCTGGACT 2927 2913 TCTCTGCATCGCTTACGGTGATGACGTCAATGTACAGTGGGTTG--AACA 2960 |||*|***|****||*|**|||||*|***|*||**|*|||||*|**|||| 2928 TCTTTTTCTGATATATGCGGATGATGGTGACGTTGACTGGGTAGCGAACA 2977 2961 TGAGTTAAGAGATTTTTTGATGCATGAGGGCTCACTCGGCTTAGTGGTAA 3010 ||***|*|||**|**||*|*|****|||||*****|*||*||**|**|*| 2978 TGCTATCAGATGTGATTGGTTCG--GAGGGTAGTTTAGGATTCATCTTTA 3025 3011 TTAGCGGAAAGATGTTAGTTAATAAAAGTAAATTAAGGGTAAGGAACTTG 3060 |||**|*****|**||*||||||||*||**|*||*|**||*||*|**||| 3026 TTAATGATCGCACCTTCGTTAATAAGAGCCAGTTGAAAGTTAGAACTTTG 3075 3061 AAAATTTACAATCGCGGTACGCTTGATTCTTTATTCTTGATTTCGGGTGG 3110 ||*||*||*|||||*||||*|*|*|||***|||*|**|*||*||*||*|| 3076 AAGATATATAATCGAGGTATGTTGGATAGGTTAATACTAATATCTGGAGG 3125 3111 CAACTATACATTTGGAAATAAGTTCCTATTATCGAAGCTGATGGCAAAAG 3160 *||*|||||*|||||*||||||||**|||||||*||**|**|*||*||** 3126 AAATTATACTTTTGGGAATAAGTTTTTATTATCAAAATTACTCGCCAAGA 3175 3161 CTGAATAGCGGAGTGACTTCCGCTCATGGTGATTCAACTTACC 3203 |*|||*||**|*||||||*|**|||**|*|||*|**||||||* 3176 CAGAAAAGTAGCGTGACTGCTACTCCAGATGAATACACTTAC- 3217