NC_005996 AY163329 1 GTTAAATTCACCATGGCTTCCGAATTTGGCATTTTGATTTGTGATAAATT 50 |||*|*||||*||||||*||*||||||||*|||*|**|****||*|*|*| 1 GTTTATTTCAGCATGGCGTCTGAATTTGGAATTCTATTGACCGAGAGAAT 50 51 GAAGGAAAATACTTTAGAAAAAACGAATTGTGACGTTATTATTACGGGAG 100 ****||**|*||*||*|*||||||*||||||||*||||||||*||*|**| 51 CTTTGACGAAACATTGGGAAAAACAAATTGTGATGTTATTATAACCGAGG 100 101 TGGGAAAAGTAGGTGTACACGAAGAGGACGGTGTGTTAGGATATGAGTGG 150 *|***||||||*******|*||*|**||*||*|||||*||*||*|*|||| 101 AGAAGAAAGTAAAACGGAAGGAGGTCGAGGGAGTGTTGGGTTACGTGTGG 150 151 GAGGAGACTAACTATAGGTTAGGATTGTGCGAAATAGAGAATACGATGTC 200 |||||*||||||*|||||||*||*||*||||||**|*|**||****||*| 151 GAGGAAACTAACCATAGGTTCGGCTTATGCGAAGGAAATTATGATTTGGC 200 201 AATCAGTGATTTTGTTTATAAGCAAATAAGATGTGAGGGAGCATACCCCA 250 |*|****|||****|*|||***||||*||**||*||*|||*|*||*||** 201 ATTTTCAGATACGATGTATTGCCAAACAAAGTGCGACGGATCGTATCCAG 250 251 TTTTGCCGCACTATGTTACAGACGTCATTAAATATGGCATGGTAATTCAT 300 |*||*|||||*|||*|*|**||*|***|*|*||||||**|**|*|||*|| 251 TATTTCCGCATTATATAATTGATGCTTTAAGATATGGAGTTATGATTGAT 300 301 AGAAATGATCATCAGATCCGAGTTGACAGAGATGAAAAAAGTATTGGAAA 350 *|*||||||*||||**|**|||||||***||||||*||**|**|****|| 301 CGGAATGATAATCAAGTAAGAGTTGATCTAGATGACAAGCGATTAATGAA 350 351 AATCCAGATTCAGCCGTATTTTGGCGATATGTATTTCTCCCCCGAGTACT 400 |||**||||||||||||||||*||*||*||||||||*||*||*|||*||| 351 AATTAAGATTCAGCCGTATTTGGGTGAAATGTATTTTTCGCCGGAGAACT 400 401 ACCCGGCAACTTTTATTAAACGTGAGTCTTTACCAATCTCAGTAGATACG 450 |**|**|****|||***|||*|**|**|**|**||*|***|||*||**** 401 ATTCAACTGTATTTTGCAAAAGGCAAGCGCTGGCACTTGGAGTTGACGAT 450 451 ATCAGAGGTTATATTGGAGCTAG-AATGCGAGGGATTGAAGCTAGGGCTG 499 *|*|||**||*|*|||**|**||*||||*|***||***||***|***|** 451 CTAAGACATTCTGTTGATGTAAGGAATGAGTTCGAAGAAACGAATCACCA 500 500 GGCGAATTAGGGAGGGTGATGGAAACTTGTTAGAATGCGCGCGCAGATGG 549 **||||**|||***|*|||**|*||*|****|||**||||**|*||*|*| 501 AACGAA--AGGTGTGTTGAATGGAAATAAACAGAGAGCGCTTGAAGTTTG 548 550 GAAA-AAGCGGCGTATGAGAGGATTGAGAATGAAAAAGCGTTGCGG---T 595 |||**||**||||*||*|**||||****||*||***|*||**|*|****| 549 GAAGGAAATGGCGCATCAACGGATGCGTAAGGAGGGATCGCGGGGTAGAT 598 596 GCGTGGCACATGAAACAGATCCAACGTATCAAATTCTTAAAAAACAAAGA 645 |**|*|*|||*||****|||**||*|||*|||*|**|*||*|||***||| 599 GTATCGGACACGATGATGATGTAATGTACCAACTGATAAAGAAATTGAGA 648 646 TTTGGATTTGTCTATCCGCATTATTATGTTTTGAATACTAATTATAATCC 695 |*|||**|**|*|||||*|||*||||*|**||||||*||***|||*|*** 649 TATGGGATGATGTATCCTCATCATTACGCATTGAATGCTCGATATGAGGT 698 696 AACAACGGTGACTAGAACTTCGCGGATTAATGATTGGTTGCTAAAAGAAA 745 **|||******|*||**|**|*||||||||*||||||*||*|*||*|*|| 699 TTCAAACC---CAAGCGCGGCACGGATTAAAGATTGGCTGTTGAAGGTAA 745 746 AGACACAAGGAGTTGTGAAGACCGCTGAGGCGTTTTCCGACAACGCAGAG 795 *|****|*|*||**|*|***||*|**||****|**||**|||***|*|** 746 GGGTTAATGTAGG-GAGGGCACAGGAGAAAGCTGATCAAACAGGCCCGC- 793 796 TTGAAGACTTTAGCGGAACGAATGGAAGAGGAGGAGCTGACTGAGGATAT 845 |*|**||**|*****||*|*|||*|||*|*||*||**|*|******|**| 794 TCGCCGAGATGGCTAGATC-AATTGAAAACGATGAATTAAGCCGTCAAGT 842 846 TATTCGAGCAGTGATCAGGTATGGAGCCAAATACGCTACGCGCTCGGGTA 895 **||*****|*|*||****|||||*|***|||****|*|**||||*||** 843 GGTTGACCAAATTATACAATATGGTGGACAATTTAGTTCATGCTCAGGCG 892 896 TGCGAGAGGATACACTGTCACTCCAGGAGTTGGATCGTTATTGCGATTCT 945 **||*||*|||****|**|**|**|****|||******|||||*||*||* 893 CACGTGAAGATGATATTCCGATAAATATTTTGTTGGAGTATTGTGAGTCC 942 946 CTAACAACTTTTGTTCATAAAAAGAAGAAGGATGAAGGTGATGATGAAAC 995 *|||||||*||||||||*|*||||||||***|*||*||*||||||***|| 943 TTAACAACATTTGTTCACAGAAAGAAGAGAAAGGAGGGGGATGATCTCAC 992 996 AGCACGTACGATAATTAGAAATCAGTGGATTAAAGGGATGCCTCGAATGG 1045 *|||||*|**|***||*|**|***|**||||||**|*|||||****|||* 993 TGCACGCAATACCTTTCGGCAGGCGCTGATTAAGAGTATGCCAACCATGA 1042 1046 ATTTCAAAAAAGAGATGAAAATCACTCGAGGTCCGATTGCGAACTGGTCG 1095 |||||||*||**|*||||||||*||**||||***|***|**||*|***|* 1043 ATTTCAAGAATCAAATGAAAATGACGAGAGGGTGG---GGAAATTATACA 1089 1096 TTTTTTATGTCTATAGATGCTTTCAAAAGGAATAATAAGGTTGATATTAA 1145 |||||****|*|||*|||***||||***|*|*|*||||**|**|||||*| 1090 TTTTTCTCATATATTGATAGATTCAGTCGTATTTATAATATGAATATTGA 1139 1146 TCCGAATCACCAGACGTGGAAGGATCACATTAAAGAAGTGACTGATCAAA 1195 |||||||****||***||||**||*||*|***||***||||*|||*||** 1140 TCCGAATGGTAAGCTTTGGATTGAACATAAACAAACGGTGAGTGAGCAGT 1189 1196 TGAATCGTGCGCAACAAGGCAACAATAATAAGCCTCTAAAGGTTCAAATC 1245 ||||******|*||||||***|*||******||||||||**||||||||* 1190 TGAAAAA---GAAACAAGAGGAGAACCGAGCGCCTCTAACCGTTCAAATT 1236 1246 GATGGTGTTAGCATACTCACGAGTGAAAAATATGGTACCGTTGGTCATTG 1295 |||||*||***|||||**|||**|||||**|||||*||*||*|*|||||| 1237 GATGGGGTGCACATACGTACGGATGAAACCTATGGAACAGTAGATCATTG 1286 1296 GGTCGATTGGGTTGTTGATTTGATTATG-TTGGCGCAGGTGAAAATGTTA 1344 |||*||*|||||*|||||****||*|||*||*|*|****||||||**|*| 1287 GGTTGAATGGGTCGTTGACACAATCATGCTTAGAGAGACTGAAAAAATGA 1336 1345 ATAAAAGAATATAAGTTTAAAAGATTAAATAGCCAAAATTTGATGTCGGG 1394 *|||**||*|||**|||*||||*|*|*||**|**|**|**||||*||*|| 1337 TTAAG-GATTATCGGTTCAAAAAACTTAAGCGTGAGGAGCTGATCTCTGG 1385 1395 TATGAACAAACTGGTTGGTGCGCTGAGATGTTATGCTTACTGCTTGATTC 1444 *|||||*|||*|*|**|*||***|**|||||***|**||*|||||*||*| 1386 AATGAATAAATTAGAGGATGGCTTACGATGTATCGTGTATTGCTTAATAC 1435 1445 TTGCTTTATATGACTATTATGGTCAAGATATTGAGGGCTTCAAGAAGGGA 1494 |||||*||||*||*|||||||****||||||*|||||*||*||||||||* 1436 TTGCTCTATACGATTATTATGAAGGAGATATCGAGGGTTTTAAGAAGGGG 1485 1495 TCAAATTCGTCTGCGATATTAGAAACGGTTATTCAGATGTTTCCGAATTT 1544 *|*|*|*|*||**|*|||*|*||*||*|||***|||||||||||*||||| 1486 ACTATTGCTTCGTCAATAGTTGAGACCGTTTCACAGATGTTTCCAAATTT 1535 1545 TAAACAGGAAATTCAAGCTAATTTCGGAATAAATTTGAATATTAAAGACA 1594 |**|***||*||***||*|||*|||||*||***|*||||**|||||*||* 1536 TCGAAGCGATATAATAGATAAATTCGGTATTTCTCTGAAAGTTAAA-ACT 1584 1595 AAAAAACAATCGCTATTCGTCGAGCGACGATGCATTCGGACTTCTCATCG 1644 *|*****||****|*||**||*|*|*|*||***||**|*|*|**||***| 1585 GAGGCCGAAGAATTGTT--TCTACCCAAGA---ATATGAAGTCATCTATG 1629 1645 AATG------AAGAGTACGGATATAAATTTGTATTTGGATGGGCGGCAAG 1688 ||||******|||||***|||||*||*|*|***|||||*|||**||**|* 1630 AATGTCGGGGAAGAGAGAGGATACAAGTATAAGTTTGGGTGGAAGGATAA 1679 1689 AGGTGAAGAAGTGTTGAGTAATTATGGAGATGTTCTCTCAGATGAGGTTG 1738 *|**||***||||*|||||*||||*||*||**||*|**|*||***|||*| 1680 TGAGGAGAGAGTGATGAGTGATTACGGGGAAATTTTGACTGAATCGGTGG 1729 1739 AAGAATTATTCACGAAACTTAGGAAGAAAGAGCATTGGGATAAGGTTGTG 1788 |*****||||*|*|||*|||***|||**|||**|*|||*|*|***|*||* 1730 AGATCCTATTTAAGAAGCTTCTTAAGGGAGAAAAGTGGAAGATTATCGTT 1779 1789 GAAGATCCAGAATCTTATTTCATAGATGAGCTTTATCAAAAGAATCCGGC 1838 ||*|||||**||*||||*|||**||||||*|||**||******|||*||| 1780 GATGATCCGCAAACTTACTTCGAAGATGA-CTTGTTCGTTG--ATCGGGC 1826 1839 GGA--AGTGTTT-TATAGCG-----CAGGCTATGATACAGATCAAAA-TG 1879 |*|**||**|||*|*|||*|*****|||*|***||**|||*|*|*||*|* 1827 GAACAAGATTTTCTCTAGGGGTGGACAGACGGCGAATCAGCTGATAAGTA 1876 1880 TGGTAATCGATGGGAAA----ATGACA--GAGGGAGTCACGTACTTCTCT 1923 |*****|**|||*|*||****||*||***|||||****||*||*||*||* 1877 TCAAGGTGAATGCGCAATCAAATAACGTTGAGGGTACGACCTATTTTTCG 1926 1924 AAAAGATTTGTTTCGTATTGGT---------ATCGTGTTGAGAAAATAAC 1964 ||||||||||||||*|||||||*********|*|*|*||**||**|**|| 1927 AAAAGATTTGTTTCTTATTGGTTCAGAATAGAACATTTTTCGATTACGAC 1976 1965 AACGAAGCACCT---TGAGTTTTTAACTGAAGAGAATCGAAAAGTCGCGC 2011 |*|*||**|*|****|||**||**|**|*||*|||*|**|*|***||*** 1977 AGCAAAAAAGCGAACTGACATTCGAGATAAAAAGACTGAATATAACG--- 2023 2012 AGTTTGATTTTGAGGATTATAAACCGATGGCTATTGGAGAGATGGGGATT 2061 |||||||*||*||*||*|**||*|||*****|||||||||**|||||||* 2024 AGTTTGACTTCGAAGACTTCAAGCCGGCATGTATTGGAGAATTGGGGATA 2073 2062 CATGCGTCGACATATAAGTATGAGTCGTTGCTCCTTGGGAAAAATAGAGG 2111 ||*|||||||||||||**||**||***|||*|**|*|||||*|**||||| 2074 CACGCGTCGACATATATCTACCAGGATTTGTTGGTCGGGAAGAGCAGAGG 2123 2112 GCAAAAAGTGAATGATTCCATCGCTCTG-TGTAACTACGATCTTGCACTT 2160 |*||**||||||*||**|*|**|***||*|||***|**||||||*|*||* 2124 GGAACGAGTGAAAGACGCGAAGGAATTGGTGTGGATG-GATCTTTCGCTG 2172 2161 ACGAATTTCGGGGTTTCGAGGCGTCAGGACTGTTGCTGGATCTCATCGTG 2210 *|||||||*|||**||||*|**|**|*||**|*||*|||****|*||*|| 2173 GCGAATTTTGGGTGTTCGCGCTGCTATGATCGATGTTGGCCAGCTTCCTG 2222 2211 TAGTGCCATTGAGCTTTCGATGAGAGCCAACATCATTATCGCTATTTTTA 2260 ***||*****|||*|*||**||||***|*|**|**|*|***|||||||** 2223 CGTTGAAGCGGAGATCTCCTTGAGGTACTATTTAGTCACATCTATTTTCG 2272 2261 GGAGA-ATCGAAGACAAGAGATATGAGAATTTCGCGAAAATATTATCCGG 2309 **|||*|*|**|**|**||***||**||**||**|*||*||*||***|** 2273 CTAGATACCTTAACCGTGAAGGATT-GAGCTTTTCAAAGATTTTGATCTC 2321 2310 ACTCACACAG----CAGCAAGACCTATATTTCCCTACGTATAAGCATTAT 2355 *||||*|*|*****|*|**|||**|||**||*||*||||||||*||||*| 2322 TCTCAAAGATTTTTCGGATAGAT-TATGGTTTCCAACGTATAAACATTTT 2370 2356 TATCTGTTTGTGTTACAAAAGGTATTACGAGATGAGAGGAGGATAGATCT 2405 |||*|****||**|||||||*||**|*||*|||||*||**|**|||||*| 2371 TATGTTGCAGTTGTACAAAAAGTGCTCCGCGATGATAGACGCTTAGAT-T 2419 2406 AAATAGAATATGCACCGAGTTGTTTGATACACAGAGGC-GAAGAGGTATT 2454 |**||***|*|****|*||****|*|**|**||*|**|*|**|*|**|** 2420 ATGTACTCTTTTGTTCTAGGGTCTCGGCAATCACAACCCGGCGTGCGACG 2469 2455 CTCCTTTCGTTTACCGCGTTGAGATTTTGGAATGATTCAGAATTTTTGGG 2504 *|**|****||||***|*||*|*|*****|***|**|||**|**|||*** 2470 TTAATGGAATTTAGTACCTTTAAACAGATGGTGGGATCAACACGTTTATT 2519 2505 TGATGCGTTAATGATGAATTTTCTACATAGGGTGGTTTTCGAGATGGAAA 2554 *|||*||*||*|**|*||||||||||*|*||*|**|||||||***|||*| 2520 GGATACGCTATTCTTAAATTTTCTACTTTGGATCATTTTCGAACAGGAGA 2569 2555 ACGTCGATGTGGATTATGGGAAGAAGTGGCATCCGCTACTAGTATCGTCA 2604 |**|*|||||*||||**|**||*|||||||||||*|||*||*|*||**|| 2570 ATATAGATGTTGATTTCGCAAATAAGTGGCATCCTCTATTAATTTCTACA 2619 2605 GAGAAGGGGCTTAGAGTGATCGCGGTTGATGTTTTTAACTCAATGATGGG 2654 ||*|||||**|*|||||*||*|||||||||||||||||********|*** 2620 GAAAAGGGCTTGAGAGTTATTGCGGTTGATGTTTTTAATAGTTCACTTAC 2669 2655 AGTGTCGACAAGTGGCTGGCTTCCTTATGTTGAACGCATTTGTTCCGAGT 2704 **|*||*||*||*||*|||||*||*|||*|*||*||*|||||*||*|||| 2670 GTTATCAACGAGCGGATGGCTGCCATATTTAGAGCGGATTTGCTCTGAGT 2719 2705 CTGATATGCGCAGGCGATTGAATGCAGATGAACTAGAGTTAAAACGGTGG 2754 |*|**|||****|*****|*|**||*||*|||*||*|**|*|||||*||| 2720 CCGCGATGGATCGAGCTCTCACCGCTGACGAAATAAATCTTAAACGATGG 2769 2755 TTCTTTGACTACTATGCGACATTACCGCTCGAAAGGAGAGGAGAGCCTCG 2804 ||**||||*|||||***|****|***|*|*||*||**|||**||*||||| 2770 TTTGTTGATTACTACATGGAGCTGAAGTTGGAGAGACGAGCGGAACCTCG 2819 2805 GTTGAGCTTTAAGTATGAAGGATTGACCACGTGGATTGGCTCAAATTGTG 2854 **||||*||*|||***||*|**||||*|||||||||*||*|||||||||| 2820 AATGAGTTTCAAGAGCGAGGCTTTGATCACGTGGATCGGGTCAAATTGTG 2869 2855 GAGGGGTGCGGGATTACGTTGTGCAATTGCTTCCTATGCGCAAATCAAAG 2904 ||||*|||***|||||*||*||*|||*|*||*||**|*||*||**|*||* 2870 GAGGAGTGACCGATTATGTCGTACAACTTCTACCCGTTCGAAAGCCGAAA 2919 2905 CCAGGGCTTCTCTGCATCGCTTACGGTGATGACGTCAATGTACAGTGGGT 2954 ||*|||*|**|*****|||**||****||*||*|*****|*|*|*||||* 2920 CCGGGGTTATTGGTTCTCGTATATTCGGAGGATGGTGGGGAAAAATGGGC 2969 2955 TGAACATGAGTTAAGAGATTTTTTGATGCATGAGGGCTCACTCGGCTTAG 3004 *||****|**|||*|*||*|***|******|||*||*****|*||*|||| 2970 AGAGTGGGCTTTACGTGACTACCTCGAAATTGATGGTAGTTTGGGTTTAG 3019 3005 TGGTAATTA-GCGGAAAGATGTTAGTTAATAAAAGTAAATTAAGGGTAAG 3053 |**|*||||*||||||*|**||*|***|||||*||||||*|**|*|||*| 3020 TATTCATTACGCGGAAGGCAGTAAAG-AATAAGAGTAAACTTGGCGTACG 3068 3054 GAACTTGAAAATTTACAATCGCGGTACGCTTGATTCTTTATTCTTGATTT 3103 **|**|||||||*||*|||*|*||*|***|||||***||**|*||*|||| 3069 CGATCTGAAAATCTATAATAGAGGGAGAGTTGATAGGTTGATTTTAATTT 3118 3104 CGGGTGGCAACTATACATTTGGAAATAAGTTCCTATTATCGAAGCTGATG 3153 ||*|*||****|||||*||||||||||||||*||*||*||*|||*|**|| 3119 CGAGCGGTGTTTATACTTTTGGAAATAAGTTTCTCTTCTCAAAGTTATTG 3168 3154 GCAAAAGCTGAATAGCGGAGTGACTTCCGCTC-ATGGTGATTCAACTTAC 3202 *|*||****||*||*|||*|||||**|||*||*|||*||||****||||| 3169 TCGAAGATAGAGTAACGGTGTGACAACCGTTCCATGCTGATCACCCTTAC 3218 3203 C 3203 * -