NC_001926 AY286446 1 AGTAGTGTACTACCGATACATCACAAACCTTTCAGAGACACATCTTTATT 50 ||||||||||||||||||||**|||*|*||****||***|********|| 1 AGTAGTGTACTACCGATACAATACACAACTAGTTGAAGGAT-------TT 43 51 TCCAAGATGAGAATTCTAATACTGCTTTTAGCAGTCACTCAACTGGCTGT 100 |**||*|||****|*||*|||*|**|*||*||*||*|***|*|**||*|* 44 TGAAATATGGAGTTACTTATAATTATCTT-GCTGTTAGGGAGC--GCAGC 90 101 GAGTAGCCCAGTTATCACTAGATGCTTTCATGGTGGGCAACTGATTGCAG 150 *||||||||**|***|||||||||*||||||||*||||||||*||||||| 91 CAGTAGCCCTATATCCACTAGATGTTTTCATGGAGGGCAACTTATTGCAG 140 151 AAAGGAAATCCCAAACATCGATTTCAGAATTCTGCATTAAAGATGACGTT 200 ||***|||||***|||*||*||*|||||*||||||*|*||*|||||*||| 141 AATCAAAATCTGCAACCTCTATATCAGAGTTCTGCTTAAAGGATGATGTT 190 201 TCTATGTTAAAATCAGAGATTGTCTACACAAAAAATGATACTGGGATTTT 250 ||*|||*|*||||||||**|****||*|*||||||||||||*||*||*|* 191 TCAATGATCAAATCAGAAGTCACTTATATAAAAAATGATACAGGTATATA 240 251 TGGCCACAGTAAAGTGTTTCGTCACTGGACGATCACAGACTGGAAAGCAT 300 ||||||||*|||||||||**|****|||||*||*|*|||*||||||***| 241 TGGCCACAATAAAGTGTTCAGGAGTTGGACCATAAAAGATTGGAAATTGT 290 301 GCAACCCTGTTGTTACGGCCGGTGGTAGTATAAATGTTATAGAGGTTGAT 350 ||||||||*|****||*||*||*||*|||||*|||||*||*||*||**|| 291 GCAACCCTATCCCAACAGCAGGAGGCAGTATCAATGTAATTGAAGTAAAT 340 351 AAAAATCTAAACCTTGTAACTAGAAATTATGTGTGCACAGGGGATTGCAC 400 **|*|*||*|*|*|*|*|||*||****|||||*||*|***|*|||||*|| 341 TCAGACCTGAGCTTAGCAACAAGGGCCTATGTTTGTAGCAGAGATTGTAC 390 401 TATAACAGTTGATAGGAAAAATGCCCAAATTATATTTCAGACAGACAAAC 450 ||||||**||||||***||*|||||||*||*|||||*||*||*||*|||* 391 TATAACCATTGATAAAGAAGATGCCCAGATAATATTCCAAACTGATAAAT 440 451 TTAATCATTTTGAAGTGACAGGAACTACTATCAGCACTGGCTGGTTTAAG 500 |*||*|||||||||||**|*|||||*||**|*||**|*||*||||||||| 441 TAAACCATTTTGAAGTCTCTGGAACAACCTTGAGTTCAGGTTGGTTTAAG 490 501 TCTAAAGCATCTGTTACTCTCGATAGAACATGTGAACATATAAAAGTAAG 550 *||||*||*||*||*|||||*||*|||||||||||||||||*|||||*|* 491 ACTAAGGCCTCAGTCACTCTGGACAGAACATGTGAACATATTAAAGTCAC 540 551 CTGTGGAAAGAAAACATTACAATTCCATGCTTGCTTTAAGCAACACATGT 600 *|||||*||||||*|**||||*||*||*||*||*|||||*||*||||||| 541 TTGTGGGAAGAAATCTCTACAGTTTCACGCCTGTTTTAAACACCACATGT 590 601 CTTGTGTTCGATTCTTACACAGGAGCATACTACCAGGGTCAATGGCAATT 650 |*||**|**|||||||*||****|**||||||||*||**||||||***** 591 CATGCATAAGATTCTTCCATCACACTATACTACCTGGAACAATGGTGTCA 640 651 TCGATCTGCCAAAATATTGAGCTGATTATAATAACAATATTGGCATTATG 700 ||*||*||||||||||||||**|*||*|||||||****|*|**|*|||** 641 TCCATGTGCCAAAATATTGAATTAATAATAATAATTGGACTCACCTTAGT 690 701 TATATTTATAATTATGATAATCTTAACAAAAACATACATTTGCTACGTGT 750 *|||||||||*|||||*|*||||||||*|||||||||||*||||||*||| 691 CATATTTATACTTATGGTTATCTTAACCAAAACATACATATGCTACCTGT 740 751 TGATCCCAGTGTTTATGCCCATAGCTTTTGCTTATGGATGGGCGTACAAC 800 |*||*|||||*||||||||**|*||*|*****|||||*|||||*||*||* 741 TAATGCCAGTATTTATGCCAGTTGCATACATATATGGCTGGGCATATAAT 790 801 AGGAGTTGTAAGAAATGCACTTGTTGCGGATTGGCATATCATCCCTTTAC 850 |*|||*||*||||||||*|*|||*||*||*||*||*||||||||*||||| 791 AAGAGCTGCAAGAAATGTAATTGCTGTGGCTTAGCTTATCATCCATTTAC 840 851 AAACTGTGGCTCATATTGTGTCTGTGGCTCCAAATTTGAAACATCGGACA 900 ||||||||||||**|||||||||||||***||||||*|||*|*||*||*| 841 AAACTGTGGCTCCCATTGTGTCTGTGGGCTCAAATTCGAAGCTTCAGATA 890 901 GAATGAGGATGCACCGAGAATCAGGGTTATGTCAGGGTTTTAAAAGCCTG 950 |||||*|**|*||**|*||*|||||*||*||*||*||*|**|||||*||* 891 GAATGCGACTACATAGGGAGTCAGGATTGTGCCAAGGCTACAAAAGTCTC 940 951 AGAGTAGCAAGAAGGCTTTGCAAATCAAAAGGCTCATCATTGATCATATC 1000 ||**||||*||*|*|||*||*|||||*||*||||||||**|**|*||*|| 941 AGGATAGCGAGGATGCTATGTAAATCTAAGGGCTCATCCCTTGTTATCTC 990 1001 CATCTTACTCTCAGTGCTGATTCTATCCTTTGTAACACCCATAGAAGGGA 1050 ****|||||*||**||||**|**|***||||*|||||||*||||||||*| 991 AGGATTACTTTCGATGCTATTATTGAGCTTTATAACACCTATAGAAGGCA 1040 1051 CTCTCACAAACTACCCTACTGATCAGAAATATACTTTAGATGAGATAGCA 1100 |**|*||*|||||||*********************************** 1041 CGTTAACCAACTACC----------------------------------- 1055 1101 GATGTCCTTCAAGCTAAAACACATGAAGATTCTACAAAATACTATATAAT 1150 ************************************************** -------------------------------------------------- 1151 ATTATATACATCACTCTTCGGTGCAGGTCTGACCATCATTTTTGCAGGAG 1200 ************||||****************************|||||* 1056 ------------ACTC----------------------------CAGGA- 1064 1201 TAGCATTGGGGTTAACAATTATACTAGAAGTATTAACCAAGATTAATGTT 1250 ************************************************** -------------------------------------------------- 1251 ATTTTTTGCAACGAATGCAACATGTACCATAGCAAAAAATCAATCAAATA 1300 ************************************************** -------------------------------------------------- 1301 TGTAGGTGATTTCACTAATAAATGTGGGTTTTGTACGTGTGGGCTGCTAG 1350 ************************************************** -------------------------------------------------- 1351 AGGATCCAGAGGGTGTTGTTGTACATAAAGCTAAAAAATCCTGTACATAT 1400 ************************************************** -------------------------------------------------- 1401 TCATATCAGATTAACTGGGTCAGAGGCATCATGATATTTGTTGCCTTTTT 1450 ************************************************** -------------------------------------------------- 1451 ATTTGTAATACAGAATACAATTATAATGGTCGCAGCAGAAGAAGACTGCT 1500 *************|||*|||*||||************************* 1065 -------------AATCCAAATATA------------------------- 1076 1501 GGAAAAATGAAGAATTAAAAGAAGATTGTGTAGGGCCTTTAATTGCACCT 1550 ************************************************** -------------------------------------------------- 1551 AAGGATTGTACTGATAAAGACCATAAAACCTACTTGAGTGAGGCTTCATT 1600 ************************************************** -------------------------------------------------- 1601 GTTAGCAACAGCAAAGAAAATAACTCAGGTGGATGCTGAAAATGTGGAGA 1650 ************************************************** -------------------------------------------------- 1651 TATTGGGGAAAACTATGGAATCAGCAATTAGAGTAATTGAAAGACAGAAG 1700 ************************************************** -------------------------------------------------- 1701 ACATACCACAGAATGCACTTGCTTGAGGCAGTATTTCTAAATAAGCACTG 1750 ************************************************** -------------------------------------------------- 1751 CGATTATTATAAAATGTTTGAACATAACAGTGGATATTCCCAAGTAAAGT 1800 ************************************************** -------------------------------------------------- 1801 GGAGGATGATGATAAAAACACAACACTTTGATATCTGTGCCTTACAAGCA 1850 ************************************************** -------------------------------------------------- 1851 AATAGCCCGTTTTGTGCTCAGTGCATTGCTGACAATTCTTGTGCGCAAGG 1900 ************************************************** -------------------------------------------------- 1901 TTCTTGGGAATTTGATACACATATGAACTCCACATATTCAAGTAAAGTCG 1950 ************************************************** -------------------------------------------------- 1951 ACAATTTTAAACATGACTTCTCTCTATTCCTCAGAATCTTTGAAGCAGCA 2000 ********************||||||************************ 1077 --------------------TCTCTA------------------------ 1082 2001 TTTCCAGGCACTGCTTATGTTCACTTGCTAACAAATATAAAAGAAAAGAA 2050 ************************************************** -------------------------------------------------- 2051 GCCCTATCAGGCAGTCAGCATGATTGAGAAAATAAAGAAGAAGTTTCCGA 2100 ***********||||*||******************************** 1083 -----------CAGTAAG-------------------------------- 1089 2101 ATAATAAACTGCTTATTGGATATTTAGATTTTGGCAAGTACTTGCTAGGC 2150 **********************||||||********************** 1090 ----------------------TTTAGA---------------------- 1095 2151 TTAAGTCATGCAAGCACATACGAGTTGCAACAGAGACAACTAGATAAGTT 2200 ************************************************** -------------------------------------------------- 2201 ATATCAGCCAACAGAATTAACCCGATCTGGTGGTCAACAAACATCATTAG 2250 ******************************************|||||||| 1096 ------------------------------------------ATCATTAG 1103 2251 CAAATTCTGTAGTAGGTCAAGCAACGAAAGAATGTAAAAAGTACAAAGAT 2300 ***************************|*||||*||************** 1104 ---------------------------ATGAATTTA-------------- 1112 2301 GTTAGTTGCTTAAGCCCAAGATTTGGAATTCCGCTGGAAGATTTAATAAG 2350 ************************************|||||********| 1113 ------------------------------------GAAGA--------G 1118 2351 CTGCTGTGACCAACCAAATTACAATATTTATAAAAAGCCAAAAAAAGTCT 2400 ||************************************************ 1119 CT------------------------------------------------ 1120 2401 ACAAAGCTCATGACAAAGAAGAAACATGGTGCATTAATGATCAGCATTGC 2450 *********|||*||*|*|||***************************** 1121 ---------ATGTCAGATAAG----------------------------- 1132 2451 CTAGTAGACTTTGTCCCAGCTGAAGCCGATACTGTAGAAAAATTGAAACC 2500 *************************************************| 1133 -------------------------------------------------C 1133 2501 TATGAAATGTTGGTTAGTTGACCCTGGCAAGAATGATGATGTCTACTCTA 2550 |||*********************************************** 1134 TAT----------------------------------------------- 1136 2551 TTGCAATAAAAACATGTAGAGTGGTTGATAAGGGAGTTTGTACTGTTAAT 2600 ************************************************** -------------------------------------------------- 2601 TCACAAAAATGGAATATAATCAAATGTGATTCTGGTCCGCTCTACTACAG 2650 ************************************************** -------------------------------------------------- 2651 TGACCACATACCAGGGGAAGATACAGGCAATGATATAGGACATTATTGTG 2700 ****||||*|||************************************** 1137 ----CACACACC-------------------------------------- 1144 2701 TATCAGCAGGATGCAAAACTGACAGATACCCAATTAATCCTGATGTTGTT 2750 ************************************************** -------------------------------------------------- 2751 ACTGACTGTGTGTGGGAATTTACTTCTAGGAAATCACAATATATAGGCAA 2800 ************************************************** -------------------------------------------------- 2801 GATCTCCATGCAGTCTCTTGAAGATTACGAAAAGGCTTTAACTGACAGAT 2850 *****************||||*||||**********|*|||********* 1145 -----------------TTGATGATT----------TATAA--------- 1158 2851 TGACCCATACCTTGGAAACCTATAGTTTTGCCCCGTTAGAAAATCTCCCG 2900 ***********||**|||||||*||*****||*********||||||||* 1159 -----------TTTTAAACCTACAG-----CC---------AATCTCCCC 1183 2901 CATATAAAACCAGTTTACAAATATATTACTGCACAAGGAGTCGAAAACTC 2950 ||||||||*|||**|||*||||*|||*||*||**|*||**|*||*||*|| 1184 CATATAAAGCCAACTTATAAATTTATAACCGCTAATGGTATAGAGAATTC 1233 2951 AGACGGTATAGAAGGGGCATTCATAACAGCCAGTATCCCAGCCGCTGGGG 3000 |||*||*|||||****||||*||||**|*|*||*||*||||||***||*| 1234 AGATGGGATAGATTCAGCATACATATTATCTAGCATACCAGCCTTGGGTG 1283 3001 GCACTAGCATAGGCTACAATGTTAGATCAAAAGATGGCTTCCCACTCCTT 3050 |*|**|||*|*|||||*||**||****||||||||***||||||*|**|* 1284 GAATGAGCGTTGGCTATAACATTCAGACAAAAGATAATTTCCCATTATTA 1333 3051 GATCTAATAGTTTTTGTGAAGAGTGCTGTGATAAAAAGCACATACAACCA 3100 |||*|*||||||||**|*|||||||||*|*||*||||**||*|||||*|| 1334 GATATTATAGTTTTCATCAAGAGTGCTATTATTAAAACAACCTACAATCA 1383 3101 TATATATGATACTGGGCCAACAATTAGCATAAATACAAAGCATGACGAAC 3150 |||||||||*||*||*||*|||||**|*||||||||**|*|||||*|||| 1384 TATATATGACACAGGTCCGACAATAGGGATAAATACTCAACATGATGAAC 1433 3151 ATTGCACTGGCCAATGTCCAAGCAATATAGAACATGAGGCTAACTGGTTG 3200 |*||||||||*|*|||*||*|*****|||***|||*|*|**||||||||* 1434 ACTGCACTGGACCATGCCCTACATTAATACTCCATAAAGAGAACTGGTTA 1483 3201 ACATTTTCACAAGAAAGAACTAGCAGATGGGGATGCGAAGAGTTTGGGTG 3250 |||||*||*||||||||*||*|||||*|||||*||*|||||*|||||*|| 1484 ACATTCTCCCAAGAAAGGACAAGCAGGTGGGGTTGTGAAGAATTTGGCTG 1533 3251 CTTGGCTGTCAACACAGGTTGTGTGTTTGGGTCTTGTCAAGATGTAATTA 3300 |*||||**|*||*||*||*|||||*|||||*||*||*||*||**|*|||* 1534 CCTGGCAATTAATACTGGGTGTGTTTTTGGCTCATGCCAGGACATTATTC 1583 3301 GACCAGAAACAAAAGTTTACAGGAAAGCTGTAGATGAAGTTGTTATTTTA 3350 **||*||**|*|||||*||||||||||||*|*||*||*|**||**|*||| 1584 ATCCCGAGGCTAAAGTATACAGGAAAGCTATCGAGGAGGAAGTAGTCTTA 1633 3351 ACAGTTTGTATTACATATCCAGGACACACTTTTTGCACAGAAATTAATGC 3400 ||*||*|||||*||||**|||||**|*||*|**||||||||*||*||||| 1634 ACTGTCTGTATAACATTCCCAGGGAATACATACTGCACAGAGATAAATGC 1683 3401 CATAGAGCCAAAAATAACGGAAGAAATTGAACTCCAGTTTAAAACAGTTG 3450 *|||||||||||||||||*||*|||||*|||||*||||||||*|||||*| 1684 AATAGAGCCAAAAATAACAGATGAAATAGAACTACAGTTTAAGACAGTAG 1733 3451 ACACGAAAACACTACCATATATAGTAGCCGTAAACAATCATAAACTTTAT 3500 |*||*||||||*|||||*||*|**||***||**|*|||||||||*|*||| 1734 ATACTAAAACATTACCAAATTTGCTAATGGTTCAGAATCATAAATTATAT 1783 3501 AGTGGTCAGATAAATGATTTAGGGACATTTGGGCAAATGTGCGGAAATGT 3550 |||||*|||||**|||||*|*||**|*|||***||****||*||*||||| 1784 AGTGGGCAGATTGATGATCTTGGTTCCTTTTCCCAGGGATGTGGCAATGT 1833 3551 CCAAAAAACAAACAGCAGCATTTTAGGAACTGGGACACCAAAATTTGATT 3600 *|||||*||*||********|**|*|||*||||*||**|||||||||||| 1834 GCAAAAGACTAATCAGTCTGTAATTGGAGCTGGAACTGCAAAATTTGATT 1883 3601 ATACTTGCCATGGTGCTAGTAGGAAGGATATCATTGTTAGGAGATGCTAT 3650 ||***||*|||||*|||||||||||*||**|*||*||*|||*|*||*||* 1884 ATGTCTGTCATGGAGCTAGTAGGAAAGACGTTATAGTAAGGCGCTGTTAC 1933 3651 AATAACAATTTTGACTCCTGCAAACTTCTAAAGGAAGAAACACAGCTTAT 3700 ||*||*||||*|||*||||||||*||**||||*||*|||||****||||| 1934 AACAATAATTATGAATCCTGCAAGCTATTAAAAGAGGAAACCTCTCTTAT 1983 3701 ATTTAATGATGACCATGATACAATAACTGTTTATAATACAAATCACTTAA 3750 ||||***|||*|*|||||*|||*||***||****||||||||*||**||| 1984 ATTTGCAGATAATCATGAAACATTAGAAGTAGCGAATACAAAGCATCTAA 2033 3751 TTGGTGAGTTAGCTATAAAATTGATATTAGGGGATATCCAGTATAAATTA 3800 |*||*||**|*****|*|||*|*||*||*||*||*||****||*||*|*| 2034 TAGGAGAACTGCAATTCAAAATTATGTTGGGAGACATTAGATACAAGTCA 2083 3801 TTCACAGAAACATTGGACCTCCAGATTGATGCGAAATGTGTTGGCTGCCC 3850 ||**|*|||*||***||**|**|**|*|||||*||||||||*|||||*|| 2084 TTTGCTGAATCACCAGAATTAGAAGTAGATGCAAAATGTGTAGGCTGTCC 2133 3851 TGATTGCTTTGAGAGCTATTCCTGCAATTTCCAAATAGTATCAAATATAG 3900 |***||*|||||*||||||||*|||||||||||*||*||**|||||||*| 2134 TTCATGTTTTGAAAGCTATTCTTGCAATTTCCAGATTGTTACAAATATTG 2183 3901 ACACAATCTGCAGCCTTGAAGGGCCTTGTGACACA-TTCCATAATAGGAT 3949 |*||**|*||*****||||*|||||||||*||||**||||||||*||**| 2184 ATACTGTTTGTTCTGTTGATGGGCCTTGT-ACACTCTTCCATAACAGACT 2232 3950 CTCAATTAAAGCAATGCAGCAAAATTATGCTGTAAAACTCTCCTGCCAGA 3999 ***|||*|**||||***|||||**|||||*|*|*|||*|****||*|**| 2233 GATAATAAGTGCAACAAAGCAATCTTATGGTTTTAAAATGAGTTGTCCAA 2282 4000 AGGATCCAAGACCATCAGGGACTTTTAAAATTTGCAACAGGGAATATACT 4049 *|*|*||***||||*|||*****||**|*||*||*|||*|**|*||*|*| 2283 GGAAGCCTGAACCAACAGAAGAATTCCAGATATGTAACCGTAAGTACAAT 2332 4050 GTTGTCTTCCATACAGTAGCAAAAGATGACAAAATAGAAATAAATGTTGG 4099 ||**|*||***||||*|*|**|||*||||*|||||*|||||*||****|| 2333 GTCCTTTTTACTACAATTGATAAAAATGATAAAATTGAAATCAACACAGG 2382 4100 AGACCAGACTTCATTCATTAAAGAGAAAGATGACAGGTGCAAAACATGGC 4149 ||||||||||||*|**||**|*||*|||||**||||*||*||*||||||| 2383 AGACCAGACTTCTTATATCTATGAAAAAGACAACAGATGTAAGACATGGC 2432 4150 TGTGTAGGGTCAGAGATGAAGGTATTAGTGTAATTTTTGAACCAATTAAA 4199 |*|||||*||*||*|||||*||*||*|||||*||||||||*||**|*||* 2433 TTTGTAGAGTTAGGGATGAGGGAATCAGTGTTATTTTTGAGCCTTTAAAG 2482 4200 GCCTTCTTTGGGAGTTATTTCAGCATCTTCTTCTACATAATTGTTGTTGT 4249 ||*||*|||||*|||||*||*||||||*|*||*||**|**||||*|*|*| 2483 GCATTTTTTGGCAGTTACTTTAGCATCATATTTTATGTTGTTGTAGGTAT 2532 4250 AGTAGTGGGATTTTTAATAATATATATTTTTATGCCAATGTTTATGAAGT 4299 |*|*||***|||*||*|**||*||||||||**|*||*|||||**|*|||| 2533 AATTGTATTATTCTTGACTATTTATATTTTCTTACCCATGTTCTTCAAGT 2582 4300 TAAAGGAAGTGTTGAAAGCAAATGAGAAGCTTTACTTGCAAGAAATTAAG 4349 |||**||**|*||*|||**|||||||*|*||*|||*|*||*|||*|*||| 2583 TAAGAGATATATTAAAAAGAAATGAGTATCTGTACCTACAGGAATTGAAG 2632 4350 CAAAAGTGAA-AATTAGACGG---TTATTAATTCA--TTGTTAAATACAT 4393 ||*||*|*|**||**|**|*|***|*||*||*|*|**||*||**||**|| 2633 CACAAATAACTAACCAATCTGCCTTCATAAAATAAAGTTATTTCATTTAT 2682 4394 T---CAAAATTCAT--ATTGACACATTGTGTCAAA--AAACAAGGCTGTT 4436 |***|||||||**|**|||*|***||||**|||****|||**||****|| 2683 TTCACAAAATTATTTCATTAAATTATTGCCTCAGGGCAAATTAGCTGTTT 2732 4437 TTGTTATCGGTAGCACACTACT 4458 |||||||||||||||||||||| 2733 TTGTTATCGGTAGCACACTACT 2754